Miyakogusa Predicted Gene
- Lj0g3v0004489.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0004489.1 Non Characterized Hit- tr|I1JKG8|I1JKG8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.4458
PE=,65.34,0,TCP,Transcription factor, TCP; FAMILY NOT NAMED,NULL;
TCP,Transcription factor TCP subgroup;
seg,NUL,NODE_28450_length_1266_cov_50.687992.path1.1
(307 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g033070.1 | TCP family transcription factor | HC | chr8:12... 282 4e-76
Medtr1g101810.4 | TCP family transcription factor | HC | chr1:45... 161 7e-40
Medtr1g101810.3 | TCP family transcription factor | HC | chr1:45... 161 7e-40
Medtr1g101810.2 | TCP family transcription factor | HC | chr1:45... 161 7e-40
Medtr1g101810.1 | TCP family transcription factor | HC | chr1:45... 160 1e-39
Medtr5g039600.1 | TCP family transcription factor | HC | chr5:17... 139 4e-33
Medtr2g006150.1 | TCP family transcription factor | HC | chr2:47... 135 7e-32
Medtr7g028160.1 | TCP family transcription factor | HC | chr7:94... 134 8e-32
Medtr4g108370.1 | TCP family transcription factor | HC | chr4:44... 134 8e-32
Medtr2g006150.2 | TCP family transcription factor | HC | chr2:47... 134 9e-32
Medtr1g063870.1 | TCP family transcription factor | HC | chr1:28... 124 9e-29
Medtr1g114380.1 | TCP family transcription factor | HC | chr1:51... 119 3e-27
Medtr1g038650.1 | TCP family transcription factor | HC | chr1:14... 115 5e-26
Medtr1g038650.2 | TCP family transcription factor | HC | chr1:14... 115 5e-26
>Medtr8g033070.1 | TCP family transcription factor | HC |
chr8:12681955-12683583 | 20130731
Length = 333
Score = 282 bits (721), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 180/344 (52%), Positives = 193/344 (56%), Gaps = 48/344 (13%)
Query: 1 MAMEASRNIDLRLGEPKEEPGTEEVAAEXXXXX----------XXQVNKAQTP------- 43
MA E S NIDL LGEPKEEP E+V+A QVNKA
Sbjct: 1 MAKENSTNIDLTLGEPKEEPEIEDVSAIKVMPMTMHVPPGIPMSMQVNKALVQAQAQAQA 60
Query: 44 --------------QKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHRSDGETI 89
QKR+STKDRHTKVEGRGRRIRMPATCAARIFQLTRELGH+SDGETI
Sbjct: 61 QTQAQAQAQAQQTIQKRSSTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETI 120
Query: 90 RWLLEHAEPAIIAATGTGTVPAIAMSVNGTLRIXXXXXXXXXXXXXXXXGDPN-EKKKRK 148
RWLLEHAEPAIIAATGTGTVPAIAMSVNGTL+I D + EKKKRK
Sbjct: 121 RWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTSPTKNPNQEPNQQSDESPEKKKRK 180
Query: 149 RPGTXXXXXXXXXXXXXXX--XXXXXLTTSNPNPTIPQQTVIPLPQNVVPVWAIPSNXXX 206
RP + T+ IPQQ I LPQN+VPVWAIPSN
Sbjct: 181 RPSNSAYVDINDTTVSVSSGLITTSNINTNTNLNLIPQQPTIQLPQNMVPVWAIPSNAVV 240
Query: 207 XXXXXXXXXXXMATAAPSNSNLQPQFFTIARPISAFVSSMVTP---VQFQXXXXXXXXXX 263
P+N QPQFFT+ARPI+ FVSSMVTP VQ
Sbjct: 241 PNGNTFF-------VVPTN---QPQFFTLARPITGFVSSMVTPVIQVQQASCSLSPSTKS 290
Query: 264 XXRATVMAPSXXXXXXXXXXLRDFSLEIYDRQELQFMSRSSSKH 307
RATVMAPS LRDFSLEIYDRQELQ +SRSSSKH
Sbjct: 291 PARATVMAPS-TAATTTTQMLRDFSLEIYDRQELQLLSRSSSKH 333
>Medtr1g101810.4 | TCP family transcription factor | HC |
chr1:45965204-45966803 | 20130731
Length = 337
Score = 161 bits (408), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 113/287 (39%), Positives = 137/287 (47%), Gaps = 48/287 (16%)
Query: 48 STKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHRSDGETIRWLLEHAEPAIIAATGTG 107
S+KDRHTKVEGRGRRIR+PATCAARIFQLTRELGH+SDGETIRWLLE AEP+II ATGTG
Sbjct: 63 SSKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLEQAEPSIIEATGTG 122
Query: 108 TVPAIAMSVNGTLRIXXXXXXXXXXXXXXXXGDPNEKKKRKRPGTXXXXXXXXXXXXXXX 167
TVPAIA+SV GTL+I G+ K+R+R
Sbjct: 123 TVPAIAVSVGGTLKI-------PTSSPARPDGEDAPVKRRRRASNSEFVDLNDQVSMCSG 175
Query: 168 XXXXXLTTSNPNPTIPQQTVIPLPQNVVPVWAIPSNXXXXXXXXXXXXXXMATAAP---- 223
T T +VP+W + SN T P
Sbjct: 176 LAPIAQTAYGAAATSSGGGSGENGGGLVPLWPVVSNGVGSN-----------TTGPFFMF 224
Query: 224 SNSNL--QPQFFTI---------ARPISAFVSSMVTPVQFQXXXXXXXXXXXXRATVMAP 272
NS L QPQF+ I RPIS FVS+M P + ++ +AP
Sbjct: 225 PNSTLMNQPQFWAIPAAPFFNVQTRPISDFVSAMQMPQ--EPSNAATAYANSNASSTLAP 282
Query: 273 -------------SXXXXXXXXXXLRDFSLEIYDRQELQFMSRSSSK 306
+ LRDFSL+I+D++ELQFM SS+
Sbjct: 283 SLSSATSTSCSATTSSSSATNTQMLRDFSLDIFDKKELQFMGCSSAN 329
>Medtr1g101810.3 | TCP family transcription factor | HC |
chr1:45965204-45966803 | 20130731
Length = 337
Score = 161 bits (408), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 113/287 (39%), Positives = 137/287 (47%), Gaps = 48/287 (16%)
Query: 48 STKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHRSDGETIRWLLEHAEPAIIAATGTG 107
S+KDRHTKVEGRGRRIR+PATCAARIFQLTRELGH+SDGETIRWLLE AEP+II ATGTG
Sbjct: 63 SSKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLEQAEPSIIEATGTG 122
Query: 108 TVPAIAMSVNGTLRIXXXXXXXXXXXXXXXXGDPNEKKKRKRPGTXXXXXXXXXXXXXXX 167
TVPAIA+SV GTL+I G+ K+R+R
Sbjct: 123 TVPAIAVSVGGTLKI-------PTSSPARPDGEDAPVKRRRRASNSEFVDLNDQVSMCSG 175
Query: 168 XXXXXLTTSNPNPTIPQQTVIPLPQNVVPVWAIPSNXXXXXXXXXXXXXXMATAAP---- 223
T T +VP+W + SN T P
Sbjct: 176 LAPIAQTAYGAAATSSGGGSGENGGGLVPLWPVVSNGVGSN-----------TTGPFFMF 224
Query: 224 SNSNL--QPQFFTI---------ARPISAFVSSMVTPVQFQXXXXXXXXXXXXRATVMAP 272
NS L QPQF+ I RPIS FVS+M P + ++ +AP
Sbjct: 225 PNSTLMNQPQFWAIPAAPFFNVQTRPISDFVSAMQMPQ--EPSNAATAYANSNASSTLAP 282
Query: 273 -------------SXXXXXXXXXXLRDFSLEIYDRQELQFMSRSSSK 306
+ LRDFSL+I+D++ELQFM SS+
Sbjct: 283 SLSSATSTSCSATTSSSSATNTQMLRDFSLDIFDKKELQFMGCSSAN 329
>Medtr1g101810.2 | TCP family transcription factor | HC |
chr1:45965204-45966803 | 20130731
Length = 337
Score = 161 bits (408), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 113/287 (39%), Positives = 137/287 (47%), Gaps = 48/287 (16%)
Query: 48 STKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHRSDGETIRWLLEHAEPAIIAATGTG 107
S+KDRHTKVEGRGRRIR+PATCAARIFQLTRELGH+SDGETIRWLLE AEP+II ATGTG
Sbjct: 63 SSKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLEQAEPSIIEATGTG 122
Query: 108 TVPAIAMSVNGTLRIXXXXXXXXXXXXXXXXGDPNEKKKRKRPGTXXXXXXXXXXXXXXX 167
TVPAIA+SV GTL+I G+ K+R+R
Sbjct: 123 TVPAIAVSVGGTLKI-------PTSSPARPDGEDAPVKRRRRASNSEFVDLNDQVSMCSG 175
Query: 168 XXXXXLTTSNPNPTIPQQTVIPLPQNVVPVWAIPSNXXXXXXXXXXXXXXMATAAP---- 223
T T +VP+W + SN T P
Sbjct: 176 LAPIAQTAYGAAATSSGGGSGENGGGLVPLWPVVSNGVGSN-----------TTGPFFMF 224
Query: 224 SNSNL--QPQFFTI---------ARPISAFVSSMVTPVQFQXXXXXXXXXXXXRATVMAP 272
NS L QPQF+ I RPIS FVS+M P + ++ +AP
Sbjct: 225 PNSTLMNQPQFWAIPAAPFFNVQTRPISDFVSAMQMPQ--EPSNAATAYANSNASSTLAP 282
Query: 273 -------------SXXXXXXXXXXLRDFSLEIYDRQELQFMSRSSSK 306
+ LRDFSL+I+D++ELQFM SS+
Sbjct: 283 SLSSATSTSCSATTSSSSATNTQMLRDFSLDIFDKKELQFMGCSSAN 329
>Medtr1g101810.1 | TCP family transcription factor | HC |
chr1:45965265-45966764 | 20130731
Length = 367
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/287 (39%), Positives = 137/287 (47%), Gaps = 48/287 (16%)
Query: 48 STKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHRSDGETIRWLLEHAEPAIIAATGTG 107
S+KDRHTKVEGRGRRIR+PATCAARIFQLTRELGH+SDGETIRWLLE AEP+II ATGTG
Sbjct: 93 SSKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLEQAEPSIIEATGTG 152
Query: 108 TVPAIAMSVNGTLRIXXXXXXXXXXXXXXXXGDPNEKKKRKRPGTXXXXXXXXXXXXXXX 167
TVPAIA+SV GTL+I G+ K+R+R
Sbjct: 153 TVPAIAVSVGGTLKI-------PTSSPARPDGEDAPVKRRRRASNSEFVDLNDQVSMCSG 205
Query: 168 XXXXXLTTSNPNPTIPQQTVIPLPQNVVPVWAIPSNXXXXXXXXXXXXXXMATAAP---- 223
T T +VP+W + SN T P
Sbjct: 206 LAPIAQTAYGAAATSSGGGSGENGGGLVPLWPVVSNGVGSN-----------TTGPFFMF 254
Query: 224 SNSNL--QPQFFTI---------ARPISAFVSSMVTPVQFQXXXXXXXXXXXXRATVMAP 272
NS L QPQF+ I RPIS FVS+M P + ++ +AP
Sbjct: 255 PNSTLMNQPQFWAIPAAPFFNVQTRPISDFVSAMQMPQ--EPSNAATAYANSNASSTLAP 312
Query: 273 -------------SXXXXXXXXXXLRDFSLEIYDRQELQFMSRSSSK 306
+ LRDFSL+I+D++ELQFM SS+
Sbjct: 313 SLSSATSTSCSATTSSSSATNTQMLRDFSLDIFDKKELQFMGCSSAN 359
>Medtr5g039600.1 | TCP family transcription factor | HC |
chr5:17429938-17427951 | 20130731
Length = 416
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 63/79 (79%), Positives = 71/79 (89%)
Query: 43 PQKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHRSDGETIRWLLEHAEPAIIA 102
P KRASTKDRHTKV+GRGRRIRMPA CAAR+FQLTRELGH+SDGETI WLL+ AEPA+IA
Sbjct: 61 PPKRASTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIA 120
Query: 103 ATGTGTVPAIAMSVNGTLR 121
ATGTGT+PA S+N +LR
Sbjct: 121 ATGTGTIPANFTSLNISLR 139
>Medtr2g006150.1 | TCP family transcription factor | HC |
chr2:471446-468724 | 20130731
Length = 487
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 64/85 (75%), Positives = 72/85 (84%), Gaps = 1/85 (1%)
Query: 37 VNKAQTPQKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHRSDGETIRWLLEHA 96
V P KR STKDRHTKV+GRGRRIRMPATCAAR+FQLTRELGH+SDGETI WLL+ A
Sbjct: 119 VTAVANPPKR-STKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQA 177
Query: 97 EPAIIAATGTGTVPAIAMSVNGTLR 121
EPAIIAATGTGT+PA ++N +LR
Sbjct: 178 EPAIIAATGTGTIPANFSTLNVSLR 202
>Medtr7g028160.1 | TCP family transcription factor | HC |
chr7:9485316-9483450 | 20130731
Length = 284
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 61/80 (76%), Positives = 70/80 (87%)
Query: 39 KAQTPQKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHRSDGETIRWLLEHAEP 98
K Q KR S KDRHTKVEGRGRRIRMPA CAARIFQLTRELGH+SDGETI+WLL+ +EP
Sbjct: 40 KKQLAPKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQSEP 99
Query: 99 AIIAATGTGTVPAIAMSVNG 118
+IIAATGTGT+PA A++ +G
Sbjct: 100 SIIAATGTGTIPASALASSG 119
>Medtr4g108370.1 | TCP family transcription factor | HC |
chr4:44961490-44959266 | 20130731
Length = 437
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 61/75 (81%), Positives = 67/75 (89%)
Query: 43 PQKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHRSDGETIRWLLEHAEPAIIA 102
P KR STKDRHTKVEGRGRRIRMPA CAAR+FQLTRELGH+SDGETI WLL+ AEPA+IA
Sbjct: 91 PPKRTSTKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIA 150
Query: 103 ATGTGTVPAIAMSVN 117
ATGTGT+PA S+N
Sbjct: 151 ATGTGTIPANFTSLN 165
>Medtr2g006150.2 | TCP family transcription factor | HC |
chr2:471446-468724 | 20130731
Length = 447
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 64/85 (75%), Positives = 72/85 (84%), Gaps = 1/85 (1%)
Query: 37 VNKAQTPQKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHRSDGETIRWLLEHA 96
V P KR STKDRHTKV+GRGRRIRMPATCAAR+FQLTRELGH+SDGETI WLL+ A
Sbjct: 119 VTAVANPPKR-STKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQA 177
Query: 97 EPAIIAATGTGTVPAIAMSVNGTLR 121
EPAIIAATGTGT+PA ++N +LR
Sbjct: 178 EPAIIAATGTGTIPANFSTLNVSLR 202
>Medtr1g063870.1 | TCP family transcription factor | HC |
chr1:28041642-28042798 | 20130731
Length = 205
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 48 STKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHRSDGETIRWLLEHAEPAIIAATGTG 107
STKDRHTKV GRGRR+RMP CAARIFQLTRELGHRSDGETI WLL HAEP+IIAATGTG
Sbjct: 48 STKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRHAEPSIIAATGTG 107
Query: 108 TVPA 111
TVPA
Sbjct: 108 TVPA 111
>Medtr1g114380.1 | TCP family transcription factor | HC |
chr1:51614461-51616519 | 20130731
Length = 257
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 67/84 (79%)
Query: 38 NKAQTPQKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHRSDGETIRWLLEHAE 97
N+ Q K+ KDRH+KV+GRGRRIRMP CAAR+FQLTRELGH+SDG+TI WLL AE
Sbjct: 22 NRQQLAVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAE 81
Query: 98 PAIIAATGTGTVPAIAMSVNGTLR 121
P+IIAATGTGT PA S++ +LR
Sbjct: 82 PSIIAATGTGTTPASFSSLSVSLR 105
>Medtr1g038650.1 | TCP family transcription factor | HC |
chr1:14250840-14248871 | 20130731
Length = 235
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 52/73 (71%), Positives = 62/73 (84%)
Query: 45 KRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHRSDGETIRWLLEHAEPAIIAAT 104
K+ +KDRH+KV+GRGRRIRMP CAAR+FQLTRELGH+SDG+TI WLL AEP+IIAAT
Sbjct: 28 KKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAAT 87
Query: 105 GTGTVPAIAMSVN 117
GTGT PA S++
Sbjct: 88 GTGTTPASFSSLS 100
>Medtr1g038650.2 | TCP family transcription factor | HC |
chr1:14250840-14248871 | 20130731
Length = 235
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 52/73 (71%), Positives = 62/73 (84%)
Query: 45 KRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHRSDGETIRWLLEHAEPAIIAAT 104
K+ +KDRH+KV+GRGRRIRMP CAAR+FQLTRELGH+SDG+TI WLL AEP+IIAAT
Sbjct: 28 KKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAAT 87
Query: 105 GTGTVPAIAMSVN 117
GTGT PA S++
Sbjct: 88 GTGTTPASFSSLS 100