Miyakogusa Predicted Gene

Lj0g3v0004369.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0004369.1 Non Characterized Hit- tr|I1JCC5|I1JCC5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.22835
PE,87.28,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; CONSERVED OLIGOMERIC
GOLGI COMPLEX COMPONENT 8,Dor1-like protein,CUFF.284.1
         (458 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g074590.1 | oligomeric component-related/COG complex compo...   804   0.0  

>Medtr8g074590.1 | oligomeric component-related/COG complex
           component | HC | chr8:31544668-31538476 | 20130731
          Length = 588

 Score =  804 bits (2076), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/468 (83%), Positives = 412/468 (88%), Gaps = 10/468 (2%)

Query: 1   MNQTMLSNHSTLLDLLEIPQLMDTCVRNGNYDEALDLEAYVGKLSTMHPKLPIIQDLAAE 60
           MNQTML+NHSTLLDLLEIPQLMDTCVRNGNYDEALDLEA+VGKLSTMHPKLPIIQ LAAE
Sbjct: 121 MNQTMLANHSTLLDLLEIPQLMDTCVRNGNYDEALDLEAFVGKLSTMHPKLPIIQALAAE 180

Query: 61  VXXXXXXXXXXXXXXXXXNIQLPECLRIIGYLRRIGVFSEYGMRLLFLRCREAWLTGLLE 120
           V                 NIQLPECLRIIGYLRRIGVFSEYGMRLLFLRCREAWL G+LE
Sbjct: 181 VRLTTQSLLSQLLQKLRSNIQLPECLRIIGYLRRIGVFSEYGMRLLFLRCREAWLNGILE 240

Query: 121 DLDQTNPYEYLKGMINCHRMHLFDVVNQYRAIFADDTSGSEENYDGGLLFSWAMHQITTH 180
           DLDQ NPYEYLKGMINCHRMHLFDVVNQYRAIFADDTSGSEENYDGGLLFSWAMHQIT+H
Sbjct: 241 DLDQANPYEYLKGMINCHRMHLFDVVNQYRAIFADDTSGSEENYDGGLLFSWAMHQITSH 300

Query: 181 LQTLKLMLPKITEGGSLSNILDQCMYCAMGLGWVGLDFRGLLPSLFEEAVLNLFSKNMST 240
           LQTLK+MLPKITEGGSLSNILDQCMYCAMGLGWVGLDFRGLLP LFEEAVLNLFSKNMST
Sbjct: 301 LQTLKVMLPKITEGGSLSNILDQCMYCAMGLGWVGLDFRGLLPPLFEEAVLNLFSKNMST 360

Query: 241 AVENFQLVLDSHRWVPLPAVGFSNSVGEESQEDVTPPSYLMEHPPLAVFINGVSAAMNEL 300
           AVENFQLVL+SHRWVPLPAVGF  +  EES+EDVTPPSYLMEHPPLAVFINGVSAAMNEL
Sbjct: 361 AVENFQLVLESHRWVPLPAVGFRANSVEESKEDVTPPSYLMEHPPLAVFINGVSAAMNEL 420

Query: 301 RPCAPISLKHVLAQELVKGLQAVSDSLLLYNTTRVLRANESGLFLSLCRAFIEVAYPHSA 360
           RPCAP+SLKHVLAQEL+KGLQAVSDSLLLYNTTRVLRANESGLFLSLCRAFIEVAYPH A
Sbjct: 421 RPCAPLSLKHVLAQELIKGLQAVSDSLLLYNTTRVLRANESGLFLSLCRAFIEVAYPHCA 480

Query: 361 TSFGRCYPGGATVIMEAKDVYQGISRLLEASSARELPKPVKNVEISSVAENGELPKMENG 420
           T FGRCY GGAT+I +AK+VY GI RL+EASSARELPKPV N E S +AENGE+PKM+NG
Sbjct: 481 TCFGRCYTGGATLITDAKNVYDGIRRLVEASSARELPKPVNNGEASGIAENGEVPKMDNG 540

Query: 421 ETPDA---NANESEAI-------NADEVNEGMNSQTEQENTNLEKAVE 458
           ETPDA   +A ESEAI       N DE N+   SQT QE  NLEK  E
Sbjct: 541 ETPDAKEPDAKESEAIDTESEATNTDETNKNSTSQTGQEVINLEKTDE 588