Miyakogusa Predicted Gene

Lj0g3v0004319.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0004319.1 Non Characterized Hit- tr|E1Z235|E1Z235_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,29.11,0.000000000002,DUF1990,Domain of unknown function
DUF1990,CUFF.281.1
         (193 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g074720.1 | UPF0548 plant-like protein | HC | chr8:3158718...   298   2e-81
Medtr8g074720.2 | UPF0548 plant-like protein | HC | chr8:3158709...   298   2e-81

>Medtr8g074720.1 | UPF0548 plant-like protein | HC |
           chr8:31587185-31584208 | 20130731
          Length = 207

 Score =  298 bits (763), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 138/161 (85%), Positives = 148/161 (91%)

Query: 1   MFFLSWGRPSPQDQKACINKAGTFNYDDKYKGATAKSLSSLKADEGLSKDGFLLNNARVL 60
           M FLSW RP+ QDQK CINK+GT NYDDKYKGA+AKSLSSLK D+GL  DGFLLNNARVL
Sbjct: 1   MVFLSWVRPTAQDQKNCINKSGTLNYDDKYKGASAKSLSSLKEDKGLPNDGFLLNNARVL 60

Query: 61  MGSGVETFEKGKSALRSWRHFGLNWAFVDPKTPVQQGVTFCVCVKEFLPWVMMPLQIAYV 120
           +GSGVETFEKGKSALRSWRHFG+NWAFVDPKTPV+QG  FCVCVKEFLPW+MMPLQ+ YV
Sbjct: 61  VGSGVETFEKGKSALRSWRHFGMNWAFVDPKTPVEQGAKFCVCVKEFLPWLMMPLQVVYV 120

Query: 121 NETSTTKNRVASFGFGSGTLNGHLLAGEERFSIEIDENNQV 161
           NETSTTKNR ASFGFGSGTL GHLLAGEERFS+EIDENNQV
Sbjct: 121 NETSTTKNRGASFGFGSGTLQGHLLAGEERFSVEIDENNQV 161


>Medtr8g074720.2 | UPF0548 plant-like protein | HC |
           chr8:31587095-31584043 | 20130731
          Length = 207

 Score =  298 bits (763), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 138/161 (85%), Positives = 148/161 (91%)

Query: 1   MFFLSWGRPSPQDQKACINKAGTFNYDDKYKGATAKSLSSLKADEGLSKDGFLLNNARVL 60
           M FLSW RP+ QDQK CINK+GT NYDDKYKGA+AKSLSSLK D+GL  DGFLLNNARVL
Sbjct: 1   MVFLSWVRPTAQDQKNCINKSGTLNYDDKYKGASAKSLSSLKEDKGLPNDGFLLNNARVL 60

Query: 61  MGSGVETFEKGKSALRSWRHFGLNWAFVDPKTPVQQGVTFCVCVKEFLPWVMMPLQIAYV 120
           +GSGVETFEKGKSALRSWRHFG+NWAFVDPKTPV+QG  FCVCVKEFLPW+MMPLQ+ YV
Sbjct: 61  VGSGVETFEKGKSALRSWRHFGMNWAFVDPKTPVEQGAKFCVCVKEFLPWLMMPLQVVYV 120

Query: 121 NETSTTKNRVASFGFGSGTLNGHLLAGEERFSIEIDENNQV 161
           NETSTTKNR ASFGFGSGTL GHLLAGEERFS+EIDENNQV
Sbjct: 121 NETSTTKNRGASFGFGSGTLQGHLLAGEERFSVEIDENNQV 161