Miyakogusa Predicted Gene
- Lj0g3v0004199.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0004199.1 Non Characterized Hit- tr|B7FJK4|B7FJK4_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,83.45,0,FAD_binding_6,Oxidoreductase, FAD-binding domain;
NAD_binding_1,Oxidoreductase FAD/NAD(P)-binding; n,CUFF.276.1
(296 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g044160.1 | NADH-cytochrome b5 reductase family protein | ... 488 e-138
Medtr3g079510.1 | NADH-cytochrome b5 reductase family protein | ... 384 e-107
Medtr3g479590.1 | NADH-cytochrome b5 reductase family protein | ... 384 e-107
Medtr7g087090.1 | NADH-cytochrome b5 reductase family protein | ... 370 e-103
Medtr4g114030.1 | NADH-cytochrome b5 reductase-like protein | HC... 205 4e-53
Medtr5g059820.1 | nitrate reductase [NADH]-like protein | HC | c... 181 6e-46
Medtr3g073180.1 | nitrate reductase [NADH]-like protein | HC | c... 179 2e-45
Medtr3g073150.1 | nitrate reductase [NADH]-like protein | HC | c... 178 7e-45
Medtr4g113900.1 | FAD-binding domain oxidoreductase | LC | chr4:... 70 3e-12
>Medtr8g044160.1 | NADH-cytochrome b5 reductase family protein | HC
| chr8:16926098-16922948 | 20130731
Length = 295
Score = 488 bits (1255), Expect = e-138, Method: Compositional matrix adjust.
Identities = 236/296 (79%), Positives = 257/296 (86%), Gaps = 2/296 (0%)
Query: 1 MELPFKMSLRFPTLDFKSLPFGKNLESEXXXXXXXXXXXXXXXXXIYYRMKNPKGSLDPQ 60
+ELPF M+L FP FKSLPF +NLE E IYYR KNPKGSLDP+
Sbjct: 2 LELPFNMTLSFPAF-FKSLPFAQNLEPEILNGAIALVAVGLTAAYIYYR-KNPKGSLDPK 59
Query: 61 NFKEFKLVKKTQLSPNAARFRFALPTPSSILGLPVGKHIRARGRDSQGEEVMRSYTPITL 120
NFKEFKLVKKT +SPN+ARF+FALPTP+SILGLPVGK+I RGRDSQGEEVMRSYTPITL
Sbjct: 60 NFKEFKLVKKTMISPNSARFKFALPTPNSILGLPVGKNILVRGRDSQGEEVMRSYTPITL 119
Query: 121 DSDRGYFDLVVKMYPNGKMSHHFRQMKEGDSLAVKGPKGRFGYKPGQVRAFGMIAGGSGI 180
DSD GYF+LVVKMYPNGKMSHHFRQMKEGD+LAVKGPKGRF YKPGQVRAFGMIAGGSGI
Sbjct: 120 DSDIGYFELVVKMYPNGKMSHHFRQMKEGDNLAVKGPKGRFSYKPGQVRAFGMIAGGSGI 179
Query: 181 TPMFQLIRAILENPKDKTKVYLIYANVTVDDILLKEELDNFANIYPYRFQLYHVLNKPPT 240
TPMFQ+IRAILENPKDKTKVYLIYANVTVDDILLKEELD FA+ +P+RF ++HVLNKPP
Sbjct: 180 TPMFQVIRAILENPKDKTKVYLIYANVTVDDILLKEELDRFADKFPHRFHVFHVLNKPPN 239
Query: 241 EWNGGVGFISKEMIDSHCPAPSPDIQILRCGPPPMNKAIANHLNTLGYTSTMQFEF 296
+WNGG G+ISKEMI+SHCPAP+PDIQILRCGPPPMNKAIA HL LGYTS MQFEF
Sbjct: 240 QWNGGTGYISKEMIESHCPAPAPDIQILRCGPPPMNKAIATHLAALGYTSNMQFEF 295
>Medtr3g079510.1 | NADH-cytochrome b5 reductase family protein | HC
| chr3:35892675-35896193 | 20130731
Length = 278
Score = 384 bits (985), Expect = e-107, Method: Compositional matrix adjust.
Identities = 177/250 (70%), Positives = 211/250 (84%)
Query: 47 YYRMKNPKGSLDPQNFKEFKLVKKTQLSPNAARFRFALPTPSSILGLPVGKHIRARGRDS 106
YY K PKG LDP+NFKEFKLVK+TQLS N A FRF LP SS+LGLP+G+HI RG+DS
Sbjct: 29 YYLTKKPKGCLDPENFKEFKLVKRTQLSHNVATFRFCLPNRSSVLGLPIGQHISCRGKDS 88
Query: 107 QGEEVMRSYTPITLDSDRGYFDLVVKMYPNGKMSHHFRQMKEGDSLAVKGPKGRFGYKPG 166
GEEV++ YTP TLD+D GYF+LVVKMYP G+MSHHF +M+EGD LAVKGPKGRF Y+P
Sbjct: 89 LGEEVIKPYTPTTLDTDVGYFELVVKMYPQGRMSHHFSEMREGDYLAVKGPKGRFKYQPN 148
Query: 167 QVRAFGMIAGGSGITPMFQLIRAILENPKDKTKVYLIYANVTVDDILLKEELDNFANIYP 226
QV+AFGM+AGG+GITPMFQ+ RAILENP+DKT V LIYANVT DDILLKEELD+ A +P
Sbjct: 149 QVKAFGMVAGGTGITPMFQVARAILENPQDKTNVNLIYANVTYDDILLKEELDDLAIKFP 208
Query: 227 YRFQLYHVLNKPPTEWNGGVGFISKEMIDSHCPAPSPDIQILRCGPPPMNKAIANHLNTL 286
RF++Y+VLN+PP W+GGVGF+SKEMI++ PAP+ DI+ILRCGPPPMNKA+A HL L
Sbjct: 209 NRFKVYYVLNQPPEIWDGGVGFVSKEMIETQFPAPAADIKILRCGPPPMNKAMAAHLEDL 268
Query: 287 GYTSTMQFEF 296
GY+ MQF+F
Sbjct: 269 GYSPQMQFQF 278
>Medtr3g479590.1 | NADH-cytochrome b5 reductase family protein | HC
| chr3:35835958-35839483 | 20130731
Length = 278
Score = 384 bits (985), Expect = e-107, Method: Compositional matrix adjust.
Identities = 177/250 (70%), Positives = 211/250 (84%)
Query: 47 YYRMKNPKGSLDPQNFKEFKLVKKTQLSPNAARFRFALPTPSSILGLPVGKHIRARGRDS 106
YY K PKG LDP+NFKEFKLVK+TQLS N A FRF LP SS+LGLP+G+HI RG+DS
Sbjct: 29 YYLTKKPKGCLDPENFKEFKLVKRTQLSHNVATFRFCLPNRSSVLGLPIGQHISCRGKDS 88
Query: 107 QGEEVMRSYTPITLDSDRGYFDLVVKMYPNGKMSHHFRQMKEGDSLAVKGPKGRFGYKPG 166
GEEV++ YTP TLD+D GYF+LVVKMYP G+MSHHF +M+EGD LAVKGPKGRF Y+P
Sbjct: 89 LGEEVIKPYTPTTLDTDVGYFELVVKMYPQGRMSHHFSEMREGDYLAVKGPKGRFKYQPN 148
Query: 167 QVRAFGMIAGGSGITPMFQLIRAILENPKDKTKVYLIYANVTVDDILLKEELDNFANIYP 226
QV+AFGM+AGG+GITPMFQ+ RAILENP+DKT V LIYANVT DDILLKEELD+ A +P
Sbjct: 149 QVKAFGMVAGGTGITPMFQVARAILENPQDKTNVNLIYANVTYDDILLKEELDDLAIKFP 208
Query: 227 YRFQLYHVLNKPPTEWNGGVGFISKEMIDSHCPAPSPDIQILRCGPPPMNKAIANHLNTL 286
RF++Y+VLN+PP W+GGVGF+SKEMI++ PAP+ DI+ILRCGPPPMNKA+A HL L
Sbjct: 209 NRFKVYYVLNQPPEIWDGGVGFVSKEMIETQFPAPAADIKILRCGPPPMNKAMAAHLEDL 268
Query: 287 GYTSTMQFEF 296
GY+ MQF+F
Sbjct: 269 GYSPQMQFQF 278
>Medtr7g087090.1 | NADH-cytochrome b5 reductase family protein | HC
| chr7:33892629-33897847 | 20130731
Length = 278
Score = 370 bits (950), Expect = e-103, Method: Compositional matrix adjust.
Identities = 169/246 (68%), Positives = 205/246 (83%)
Query: 51 KNPKGSLDPQNFKEFKLVKKTQLSPNAARFRFALPTPSSILGLPVGKHIRARGRDSQGEE 110
K K L+P F+EFKLVKK QLS N A+F F+LPTP+S+LGLP+G+HI RG+D QG+E
Sbjct: 33 KKSKACLNPDQFREFKLVKKAQLSHNVAKFTFSLPTPTSVLGLPIGQHISCRGKDGQGDE 92
Query: 111 VMRSYTPITLDSDRGYFDLVVKMYPNGKMSHHFRQMKEGDSLAVKGPKGRFGYKPGQVRA 170
V++ YTP TLDSD G+F+LV+KMYP G+MSHHFR+M+ GD LAVKGPKGRF Y+PG+VRA
Sbjct: 93 VIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFKYQPGEVRA 152
Query: 171 FGMIAGGSGITPMFQLIRAILENPKDKTKVYLIYANVTVDDILLKEELDNFANIYPYRFQ 230
FGM+AGGSGITPMFQ+ RAILENP DKTKV+LIYANVT +DILLKEELD A YP RF+
Sbjct: 153 FGMLAGGSGITPMFQVARAILENPNDKTKVHLIYANVTFEDILLKEELDGLATNYPDRFK 212
Query: 231 LYHVLNKPPTEWNGGVGFISKEMIDSHCPAPSPDIQILRCGPPPMNKAIANHLNTLGYTS 290
+Y+VLN+PP W+GGVGF+SKEMI +H P P+ DI+ILRCGPPPMNKA+A HL + Y
Sbjct: 213 IYYVLNQPPEVWDGGVGFVSKEMIQAHLPPPAQDIKILRCGPPPMNKAMAAHLEAIEYAP 272
Query: 291 TMQFEF 296
MQF+F
Sbjct: 273 EMQFQF 278
>Medtr4g114030.1 | NADH-cytochrome b5 reductase-like protein | HC |
chr4:46918728-46924991 | 20130731
Length = 325
Score = 205 bits (522), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 112/265 (42%), Positives = 158/265 (59%), Gaps = 20/265 (7%)
Query: 50 MKNPKGSLDPQNFKEFKLVKKTQLSPNAARFRFALPTPSSILGLPVGKHIRAR---GRDS 106
+K +L P + EFKL ++S + +RF+ P+ LGL V I R G+D+
Sbjct: 63 IKTKNIALIPDKWVEFKLQDTARVSHDTHLYRFSF-DPTKKLGLDVASCILTRAPFGQDA 121
Query: 107 QGEE--VMRSYTPITLDSDRGYFDLVVKMYPNGKMSHHFRQMKEGDSLAVKGPKGRFGYK 164
+ + V+R YTPI+ +GYFDL++K+YP GKMS HF +K GD + VKGP +F Y
Sbjct: 122 EEKPKYVIRPYTPISDTESKGYFDLLIKVYPEGKMSQHFASLKPGDMVEVKGPIEKFKYT 181
Query: 165 PGQVRAFGMIAGGSGITPMFQLIRAILENPKDKTKVYLIYANVTVDDILLKEELDNFANI 224
P + GMIAGGSGITPM Q+I AIL+N DKT++ LIYANV+ DDILL+++LD A
Sbjct: 182 PNMKKNIGMIAGGSGITPMLQVIEAILKNSDDKTQISLIYANVSPDDILLQQKLDILAKS 241
Query: 225 YPYRFQLYHVLNKPPTEWNGGVGFISKEMIDSHCPAPSPDIQILRCGPPPMNKAIANH-- 282
+P ++++ ++ P W GG G+ISK+M+ PAPS D +L CGPP M + I+
Sbjct: 242 HP-NLKVFYTVDNPTKTWKGGAGYISKDMVVKGLPAPSDDTLVLVCGPPGMMQHISGEKA 300
Query: 283 -----------LNTLGYTSTMQFEF 296
L GYT M ++F
Sbjct: 301 KDWTQGEVSGILKEAGYTEQMVYKF 325
>Medtr5g059820.1 | nitrate reductase [NADH]-like protein | HC |
chr5:24866496-24860761 | 20130731
Length = 884
Score = 181 bits (460), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 102/253 (40%), Positives = 148/253 (58%), Gaps = 21/253 (8%)
Query: 56 SLDPQNFKEFKLVKKTQLSPNAARFRFALPTPSSILGLPVGKHIRARGRDSQGEEVMRSY 115
+L+P+ KL+ KT +S + FRFALP+ +LGLPVGKHI G+ VMR+Y
Sbjct: 624 ALNPREKIPCKLIAKTSISHDVRLFRFALPSEDQLLGLPVGKHIFL-CVTVDGKLVMRAY 682
Query: 116 TPITLDSDRGYFDLVVKMY--------PNGK-MSHHFRQMKEGDSLAVKGPKGRFGY--- 163
TP + + GYF+LVVK+Y PNG MS + + G +L VKGP G Y
Sbjct: 683 TPTSSVDEIGYFELVVKVYFKNVHPRFPNGGIMSQYLDSLTIGSTLEVKGPVGHIEYLGR 742
Query: 164 -------KPGQVRAFGMIAGGSGITPMFQLIRAILENPKDKTKVYLIYANVTVDDILLKE 216
K + +AGG+GITP++Q+ +IL++ D+T++Y++YAN T DDILL+E
Sbjct: 743 GNFSVHGKQRFAKKLTFLAGGTGITPVYQVANSILKDANDQTEMYVVYANRTEDDILLRE 802
Query: 217 ELDNFANIYPYRFQLYHVLNKPPTEWNGGVGFISKEMIDSHCPAPSPDIQILRCGPPPMN 276
ELD +A IY RF++++V+ W VGFI++ ++ H P D L CGPPPM
Sbjct: 803 ELDEWAKIYSDRFKIWYVVENAKEGWEYSVGFITESIMREHVPLAGEDTLALACGPPPMI 862
Query: 277 K-AIANHLNTLGY 288
+ A+ +L +GY
Sbjct: 863 QFAVQPNLEKMGY 875
>Medtr3g073180.1 | nitrate reductase [NADH]-like protein | HC |
chr3:32990367-32986836 | 20130731
Length = 902
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/257 (40%), Positives = 155/257 (60%), Gaps = 23/257 (8%)
Query: 56 SLDPQNFKEFKLVKKTQLSPNAARFRFALPTPSSILGLPVGKHIRARGRDSQGEEVMRSY 115
+L+P+ KL+ K +S + FRFALP +LGLPVGKHI + + MR+Y
Sbjct: 642 ALNPREKTSCKLLFKKSISHDVRLFRFALPYEGQLLGLPVGKHIFLCATIDE-KLCMRAY 700
Query: 116 TPITLDSDRGYFDLVVKMY--------PNGK-MSHHFRQMKEGDSLAVKGPKGRFGY--- 163
TP + ++G+FDLVVK+Y PNG MS H M G +L +KGP G Y
Sbjct: 701 TPTSSVDEKGHFDLVVKIYLKGVHPKFPNGGLMSQHLDSMPIGSTLDIKGPLGHIEYAGR 760
Query: 164 -------KPGQVRAFGMIAGGSGITPMFQLIRAILENPKDKTKVYLIYANVTVDDILLKE 216
K + M+AGGSGITP++Q+++AIL++P+D T+++++YAN + DDILL+E
Sbjct: 761 GNFMVHGKHKFAKRLAMLAGGSGITPIYQVVQAILKDPEDLTELHVVYANRSEDDILLRE 820
Query: 217 ELDNFANIYPYRFQLYHVLNKPPTE-WNGGVGFISKEMIDSHCPAPSPDIQILRCGPPPM 275
E+D++A + +F++++V+ + E W VGFI++ ++ H P SPD L CGPPPM
Sbjct: 821 EMDSWAKKHE-QFKVWYVVQESKREGWEYSVGFITESILKQHVPQASPDTLALVCGPPPM 879
Query: 276 NK-AIANHLNTLGYTST 291
+ A+ +L LGY T
Sbjct: 880 VQFAVKPNLEKLGYDVT 896
>Medtr3g073150.1 | nitrate reductase [NADH]-like protein | HC |
chr3:32962633-32957507 | 20130731
Length = 876
Score = 178 bits (451), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 154/264 (58%), Gaps = 24/264 (9%)
Query: 46 IYYRMKNPKGSLDPQNFKEFKLVKKTQLSPNAARFRFALPTPSSILGLPVGKHIRARGRD 105
I +M+N ++P+ KLV K+ +S N FRFALP +LGLP+GKH+ D
Sbjct: 607 IITQMQNNVALINPRERISCKLVSKSSISHNVRIFRFALPYEDQLLGLPIGKHLFLC--D 664
Query: 106 SQGEEV-MRSYTPITLDSDRGYFDLVVKMY---------PNGKMSHHFRQMKEGDSLAVK 155
+ E++ MR++TP + ++GYFDL+VK+Y G MS H + G L +K
Sbjct: 665 TIEEKLCMRAFTPTSSVDEKGYFDLLVKIYFKGVHPKFPSGGLMSQHLDSLPIGSILDIK 724
Query: 156 GPKGRFGY----------KPGQVRAFGMIAGGSGITPMFQLIRAILENPKDKTKVYLIYA 205
GP G Y K + M+AGG+GITP++Q+++AIL++ KD T++Y++YA
Sbjct: 725 GPLGHIEYIGRGNFLVHGKHKFAKRLAMLAGGTGITPIYQVVQAILKDLKDLTEIYVVYA 784
Query: 206 NVTVDDILLKEELDNFANIYPYRFQLYHVLNKPPTE-WNGGVGFISKEMIDSHCPAPSPD 264
N + DDILL+EE+D+++ + RF++++V+ + E W VGFI++ ++ H P S D
Sbjct: 785 NRSEDDILLREEMDSWSKKHE-RFKVWYVVQESKREGWKYNVGFITESILKKHVPEASED 843
Query: 265 IQILRCGPPPMNKAIANHLNTLGY 288
L CGPPPM + L LGY
Sbjct: 844 TLALACGPPPMIHGVKFDLENLGY 867
>Medtr4g113900.1 | FAD-binding domain oxidoreductase | LC |
chr4:46879690-46881699 | 20130731
Length = 179
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 8/94 (8%)
Query: 113 RSYTPITLDSDRGYFDLVVKMYPNGKMSHHFRQMKEGDSLAVKGPKGRFGYKPGQVRAFG 172
R YTPI+ +GYFDL++K+YP G+M+ HF +K GD + + GY P +
Sbjct: 91 RRYTPISDPEIKGYFDLLIKVYPKGRMTQHFASLKSGDVVQMT------GYNPNIKKNIC 144
Query: 173 MIAGGSGITPMFQLIRAI--LENPKDKTKVYLIY 204
MIAGG+GI PM +I+ ++NP + +I+
Sbjct: 145 MIAGGTGINPMLLVIQIFYTVDNPTENWNGGVIW 178