Miyakogusa Predicted Gene

Lj0g3v0002849.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0002849.1 Non Characterized Hit- tr|B9RLA2|B9RLA2_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,44.74,2e-16,seg,NULL,gene.g227.t1.1
         (148 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g069910.1 | transmembrane protein, putative | HC | chr8:29...   145   1e-35

>Medtr8g069910.1 | transmembrane protein, putative | HC |
           chr8:29577920-29578946 | 20130731
          Length = 141

 Score =  145 bits (367), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 76/140 (54%), Positives = 89/140 (63%), Gaps = 4/140 (2%)

Query: 2   EELNMLAADCVVISXXXXXXXXXXXXXXXXXXXXXTREYAKKMFCQRKGNYRGMQGEIDF 61
           E+ NMLAADCVVIS                     TREY KK+FCQRKGNYRG+Q E+  
Sbjct: 3   EDWNMLAADCVVISCCCQCLVLQILVLVLRKMVRKTREYGKKIFCQRKGNYRGVQREMGS 62

Query: 62  YKAVLVRIHEQSIRIQAQKDDAGHSSGYCMEEVEKVMEEFYQNGEFAFGSFWGRKGPWGV 121
           YK V++RI E      A KDD  H+ G CM EVEKVMEE  + GEF FGSFWGRK PWG 
Sbjct: 63  YKDVVLRIQEDY----ALKDDDVHNCGCCMVEVEKVMEELCEKGEFGFGSFWGRKEPWGF 118

Query: 122 PPIVNDHNCKNFAQYEILDL 141
           P +VNDH   +F +Y+I+DL
Sbjct: 119 PQVVNDHYDDSFVRYQIIDL 138