Miyakogusa Predicted Gene
- Lj6g3v2275070.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v2275070.1 tr|D2STE6|D2STE6_GOSHI Pentatricopeptide repeat
protein OS=Gossypium hirsutum GN=PPR2 PE=2 SV=1,47.06,1e-18,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; PPR,Pentatricopeptide repeat;
PPR: pentatricopeptid,CUFF.61039.1
(102 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 1e-31
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-20
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-18
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-16
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 81 2e-16
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-16
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-16
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-16
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-15
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 78 1e-15
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-15
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 2e-15
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-15
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 77 3e-15
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-15
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 5e-15
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 76 6e-15
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 8e-15
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-14
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-14
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-14
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-14
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-14
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-14
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-14
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-14
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-14
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-14
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 4e-14
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-14
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-14
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 72 7e-14
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 8e-14
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-14
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-13
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 70 2e-13
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-13
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 3e-13
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 3e-13
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-13
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 70 4e-13
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-13
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 69 6e-13
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-13
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-13
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 69 9e-13
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 1e-12
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-12
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 68 1e-12
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 68 1e-12
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-12
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-12
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 67 2e-12
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-12
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 67 2e-12
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 67 2e-12
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-12
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 67 2e-12
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-12
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 2e-12
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-12
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-12
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-12
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-12
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-12
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-12
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 4e-12
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-12
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-12
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-12
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-12
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-12
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 65 8e-12
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 8e-12
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-12
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-11
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-11
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-11
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-11
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-11
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-11
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-11
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-11
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-11
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-11
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 64 2e-11
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-11
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-11
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-11
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 4e-11
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-11
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-11
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 5e-11
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-11
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-11
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-11
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-11
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 6e-11
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-11
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-11
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-11
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-11
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-11
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-11
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-10
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 61 1e-10
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-10
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-10
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-10
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-10
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-10
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-10
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 60 2e-10
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-10
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 2e-10
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-10
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-10
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-10
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-10
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 60 3e-10
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 60 4e-10
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-10
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-10
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 59 5e-10
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-10
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-10
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-10
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-10
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-10
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-10
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 59 6e-10
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-10
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-10
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-10
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 58 1e-09
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-09
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 1e-09
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 58 1e-09
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-09
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-09
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-09
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 57 2e-09
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-09
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-09
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-09
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-09
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-09
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-09
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-09
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-09
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-09
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-09
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-09
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-09
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-09
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 7e-09
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-09
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-09
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-09
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 55 1e-08
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-08
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-08
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-08
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-08
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-08
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-08
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 54 2e-08
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-08
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-08
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 53 4e-08
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-08
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-08
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-08
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-08
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-08
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 7e-08
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-08
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-08
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-08
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 52 1e-07
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 1e-07
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-07
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-07
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-07
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-07
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-07
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-07
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 50 3e-07
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-07
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-07
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-07
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-07
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 49 7e-07
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 8e-07
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-07
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 49 9e-07
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 1e-06
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 48 2e-06
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 2e-06
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 2e-06
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 3e-06
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 47 3e-06
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 46 6e-06
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 130 bits (328), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 62/102 (60%), Positives = 79/102 (77%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ + MK NSSTFVGLLS+C SE+ + R V +EEE++ LDA+LGTALVDM AK G
Sbjct: 319 MKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGL 378
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L++A+ IF RM+DKDVKSWTAMISG+G HG +A+ LFN+M
Sbjct: 379 LEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKM 420
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 93.6 bits (231), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 69/102 (67%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR G + +S+TFV LLSAC + ++ L V +I E L L+ LGTAL+++ ++CG
Sbjct: 199 MRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGD 258
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ +A +F++M++ +V +WTAMIS +G HG +A+ LFN+M
Sbjct: 259 VGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKM 300
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%)
Query: 9 NSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIF 68
++ TF ++ +C ++ + + V LD + ALV +KCG ++ A +F
Sbjct: 106 SNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVF 165
Query: 69 ERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+RM +K + +W +++SG +G +AI++F +M
Sbjct: 166 DRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQM 199
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 86.7 bits (213), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 61/99 (61%)
Query: 4 QGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDE 63
+G+K N T +LSAC S ++ + +I + ++LD +GTALVDM AKCG LD
Sbjct: 287 KGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDC 346
Query: 64 AMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
A +F M KD+ SWTAMI G VHG+ +AI+ F +M
Sbjct: 347 AATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQM 385
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 81.6 bits (200), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 64/102 (62%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M G + ++ + +L AC + ++ L + + +IE +KL + +L AL+DM AKCG
Sbjct: 300 MEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGC 359
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L++A +FE M+ +DV SWTAMIS +G G+ A+ LF+++
Sbjct: 360 LEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKL 401
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEA 64
++ + TF +L AC S +I + R + + L +G LV M KCGFL EA
Sbjct: 135 NVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEA 194
Query: 65 MGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ + M +DV SW +++ G+ + + A+ + M
Sbjct: 195 RLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM 232
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 80.9 bits (198), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 63/102 (61%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+++ + N T V +LSAC ++ L R V SF+E ++++L +G AL++M ++CG
Sbjct: 246 MQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGD 305
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
++EA +F M DKDV S+ MISG +HG +AI F M
Sbjct: 306 INEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDM 347
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 44 DAVLGTALVDMCAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
D V T +++ ++CGF+ EA+ +F+ ++ KD WTAMI G + + KA+ LF M
Sbjct: 188 DHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREM 246
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 80.1 bits (196), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 58/98 (59%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEA 64
G+K + TF +L AC ++ + + I E +L+ D +L +AL+DM +KCG EA
Sbjct: 405 GVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEA 464
Query: 65 MGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
IF + KDV SWT MIS +G HGQP +A+ F+ M
Sbjct: 465 FRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEM 502
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M G + NS + +SAC + + + ++ +LD + +ALVDM KC
Sbjct: 199 MESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDC 258
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L+ A +F++M K + +W +MI G+ G + + NRM
Sbjct: 259 LEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRM 300
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%)
Query: 9 NSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIF 68
+S TF ++ A A L R + + + + D V+ ++LV M AK + ++ +F
Sbjct: 106 DSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVF 165
Query: 69 ERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ M ++DV SW +IS G+ KA+ LF RM
Sbjct: 166 DEMPERDVASWNTVISCFYQSGEAEKALELFGRM 199
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 52/102 (50%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M I+G + + +T +L AC S ++ + + ++ + D + +L+D+ KCG
Sbjct: 300 MIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGE 359
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ A +F + + +SW MIS + G KA+ ++++M
Sbjct: 360 ANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQM 401
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 79.3 bits (194), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 63/100 (63%), Gaps = 3/100 (3%)
Query: 6 MKTNSSTFV--GLLSACPASESIHLVRHVTSF-IEEEKLQLDAVLGTALVDMCAKCGFLD 62
MKT V +L C S+ + R + F ++ +++ D LG +L+DM AK G ++
Sbjct: 310 MKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIE 369
Query: 63 EAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+A+ FE M++KDV+SWT++I+G+G HG KAI L+NRM
Sbjct: 370 DAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRM 409
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M + +K N T+ +L +C + + +E+ + ++ +AL+ + A+CG
Sbjct: 104 MHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGK 163
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
++EA F+ M+++D+ SW AMI G+ + + LF M
Sbjct: 164 MEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLM 205
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 79.3 bits (194), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 64/102 (62%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ G N STF ++ AC S + + V + I + + +G++L+DM AKCG
Sbjct: 264 MQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGG 323
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+++A +F++M++K+V SWT+MI G+G +G P +A+ LF RM
Sbjct: 324 INDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRM 365
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESI-----HLVRHVTSFIEEEKLQLDAVLGTALVDMC 55
M G K + T +L A + S L R V + I + ++LD VL TALVD
Sbjct: 126 MSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTY 185
Query: 56 AKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFN 100
K G L+ A +FE M+D++V T+MISG+ G A +FN
Sbjct: 186 VKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFN 230
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 78.2 bits (191), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 56/94 (59%)
Query: 9 NSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIF 68
N T +LSAC ++H R V ++ + ++++ GT L+D+ KCG L+EA+ +F
Sbjct: 305 NEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVF 364
Query: 69 ERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
ER+ +K+V +WTAMI+G HG A LF M
Sbjct: 365 ERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTM 398
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTS-FIEEEKLQLDAVLGTALVDMCAKCG 59
M+ G+ N T V +L A E + R V ++E +++ D +G++LVDM KC
Sbjct: 195 MKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCS 254
Query: 60 FLDEAMGIFERMEDKDVKSWTAMISGH 86
D+A +F+ M ++V +WTA+I+G+
Sbjct: 255 CYDDAQKVFDEMPSRNVVTWTALIAGY 281
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 77.8 bits (190), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 64/102 (62%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ ++ N T V +L A S+ L + + E+ +++D VLG+AL+DM +KCG
Sbjct: 265 MKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGI 324
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+++A+ +FER+ ++V +W+AMI+G +HGQ AI F +M
Sbjct: 325 IEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKM 366
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 77.4 bits (189), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 58/96 (60%)
Query: 7 KTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMG 66
K + T V LSAC ++ R + F++ +++L+ + T L+DM +KCG L+EA+
Sbjct: 256 KPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVL 315
Query: 67 IFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F KD+ +W AMI+G+ +HG A+RLFN M
Sbjct: 316 VFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEM 351
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 6 MKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAM 65
+ N TF LL +C + HV F L +D + T LVD+ AK G + A
Sbjct: 126 INPNEFTFSSLLKSCSTKSGKLIHTHVLKF----GLGIDPYVATGLVDVYAKGGDVVSAQ 181
Query: 66 GIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F+RM ++ + S TAMI+ + G A LF+ M
Sbjct: 182 KVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSM 218
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 77.4 bits (189), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 64/102 (62%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ G++ ++ V LL+ C + ++ + + +I E ++ +D V+GTALVDM AKCG
Sbjct: 270 MQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGC 329
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
++ A+ +F ++++D SWT++I G ++G +A+ L+ M
Sbjct: 330 IETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEM 371
Score = 72.4 bits (176), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Query: 6 MKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAM 65
+K + T V LSAC A +++ + + F+ E ++ +G ALVDM KCG LD+A
Sbjct: 144 LKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVRIGNALVDMFCKCGCLDKAR 202
Query: 66 GIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNR 101
+F+ M DK+VK WT+M+ G+ G+ +A LF R
Sbjct: 203 AVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFER 238
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 77.0 bits (188), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 65/102 (63%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ ++ ++ + LSAC ++ + + S++ + ++++D+VLG L+DM AKCG
Sbjct: 238 MQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGE 297
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
++EA+ +F+ ++ K V++WTA+ISG+ HG +AI F M
Sbjct: 298 MEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEM 339
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 76.6 bits (187), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 62/102 (60%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ + +K N T + +LS+C S+ L + + + ++ + TAL+DM AKCG
Sbjct: 221 MQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGS 280
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
LD+A+ IFE+M KD ++W+AMI + HG+ K++ +F RM
Sbjct: 281 LDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERM 322
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 51/98 (52%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEA 64
G+ ++ TF LL AC ++++ R + + L + + L++M +C +D A
Sbjct: 124 GILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSA 183
Query: 65 MGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F+R+ + V + AMI+G+ +P +A+ LF M
Sbjct: 184 RCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREM 221
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 76.6 bits (187), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR +G++ NS T + ++SAC S + V S I + +LG AL+DM AKCG
Sbjct: 344 MRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGS 403
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L A +F + +KD+ SW++MI+ +G+HG ++A+ +F M
Sbjct: 404 LSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGM 445
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 1 MRIQGMKTNSSTFVGLLSAC-PASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCG 59
M+ + ++ N T + +L AC + LV+ + F D L A + M +CG
Sbjct: 242 MQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCG 301
Query: 60 FLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ + +FE + +DV W++MISG+ G ++ + L N+M
Sbjct: 302 NVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQM 344
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 1 MRIQGMKTNSSTFVGLLSACP---ASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAK 57
M G S LL+ C +S + + H ++E ++Q +L TALVDM K
Sbjct: 139 MYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDE-RMQESVLLSTALVDMYLK 197
Query: 58 CGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
A +F++ME K+ SWTAMISG + + LF M
Sbjct: 198 FDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAM 242
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 76.3 bits (186), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEA 64
G+K ++ V LSAC S + + + + ++L +D+ L T LVD AKCGF+D A
Sbjct: 244 GLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTA 303
Query: 65 MGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
M IFE DK + +W AMI+G +HG + F +M
Sbjct: 304 MEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKM 341
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 75.9 bits (185), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 59/102 (57%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M + +K + T VG+LSAC ++ R V S+IEE ++ ++ L A++DM KCG
Sbjct: 223 MESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGS 282
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+++A +F+ ME+KD +WT M+ G+ + A + N M
Sbjct: 283 IEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSM 324
Score = 70.1 bits (170), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 61/99 (61%)
Query: 4 QGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDE 63
+ MK N T V LSAC ++ L R + S+I++ ++++ + +AL+ M +KCG L++
Sbjct: 359 KNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEK 418
Query: 64 AMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ +F +E +DV W+AMI G +HG +A+ +F +M
Sbjct: 419 SREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKM 457
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%)
Query: 9 NSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIF 68
N TF L+ A S+ L + + + + D + +L+ CG LD A +F
Sbjct: 130 NKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVF 189
Query: 69 ERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+++KDV SW +MI+G G P KA+ LF +M
Sbjct: 190 TTIKEKDVVSWNSMINGFVQKGSPDKALELFKKM 223
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 75.1 bits (183), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 56/102 (54%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ G + TF LLS C AS + + S I ++KL + +G ALVDM AKCG
Sbjct: 419 MKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGA 478
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L++A IFERM D+D +W +I + ++A LF RM
Sbjct: 479 LEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRM 520
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR G+ + +TFV +L C S+ R + S I LD + L+DM AKCG
Sbjct: 723 MRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGD 782
Query: 61 LDEAMGIFERMEDK-DVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ + +F+ M + +V SW ++I+G+ +G A+++F+ M
Sbjct: 783 MKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSM 825
Score = 58.9 bits (141), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%)
Query: 9 NSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIF 68
N TF +LS C ++ R + + + L+ ++ G ALVDM AKC + +A +F
Sbjct: 159 NKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVF 218
Query: 69 ERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
E + D + WT + SG+ G P +A+ +F RM
Sbjct: 219 EWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 1 MRIQGMKTNSSTFVGLLSACP--ASESIHLVRHVTSFIEEEKLQL--DAVLGTALVDMCA 56
MR +K+ ST +LSA A+ + LV H E KL L + +G++LV M +
Sbjct: 318 MRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHA----EAIKLGLASNIYVGSSLVSMYS 373
Query: 57 KCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
KC ++ A +FE +E+K+ W AMI G+ +G+ K + LF M
Sbjct: 374 KCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDM 419
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 75.1 bits (183), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 59/102 (57%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ + NS T +LS C +++L R + + + + ++ ALV+M AKCG
Sbjct: 425 MQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGL 484
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L E +FE + DKD+ SW ++I G+G+HG KA+ +F+RM
Sbjct: 485 LSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRM 526
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 74.7 bits (182), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 64/102 (62%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+++G+K N + +LSAC ++ R S+IE K+++ L T LVD+ AKCG
Sbjct: 231 MQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGD 290
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+++AM +F ME+K+V +W++ ++G ++G K + LF+ M
Sbjct: 291 MEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLM 332
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 44 DAVLGTALVDMCAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
D V TA+V CA+CG + A +FE M ++D +W AMISG+ G+ +A+ +F+ M
Sbjct: 173 DFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLM 231
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 74.7 bits (182), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 59/102 (57%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M G+K +++ + +L+AC S + L + S ++ L +A + AL+DM AKCG
Sbjct: 306 MVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGN 365
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L +A +F + KD+ SW M+ G GVHG +AI LF+RM
Sbjct: 366 LKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRM 407
Score = 58.9 bits (141), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLD-- 62
G+ ++ T+ LL AC + +V+ + + IE+ L D + AL+D ++CG L
Sbjct: 112 GLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVR 171
Query: 63 EAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+AM +FE+M ++D SW +M+ G G+ A RLF+ M
Sbjct: 172 DAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEM 211
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 74.3 bits (181), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 63/102 (61%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ GM + T V +L+AC S+ + + ++I++ K++ D V+G AL+DM KCG
Sbjct: 359 MQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGC 418
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
++A +F M+ +D +WTAM+ G +GQ +AI++F +M
Sbjct: 419 SEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQM 460
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%)
Query: 10 SSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFE 69
S T + +LSAC + L + V ++ E K + L ALV+ A CG +D A+ IF
Sbjct: 236 SVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFR 295
Query: 70 RMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
M+ +DV SWT+++ G+ G A F++M
Sbjct: 296 SMKARDVISWTSIVKGYVERGNLKLARTYFDQM 328
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 4 QGMKTNSSTFVGLLS-------ACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCA 56
+G+ +S TF LL+ A + +H HV F L + + ALV M +
Sbjct: 128 EGVTPDSHTFPFLLNGLKRDGGALACGKKLHC--HVVKF----GLGSNLYVQNALVKMYS 181
Query: 57 KCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
CG +D A G+F+R +DV SW MISG+ + ++I L M
Sbjct: 182 LCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEM 227
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 74.3 bits (181), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 57/99 (57%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M++ +K N T V LL A S+ + R V + + LD LGTAL+DM +KCG
Sbjct: 242 MQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGS 301
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLF 99
L +A +F+ M+ K + +W +MI+ GVHG +A+ LF
Sbjct: 302 LQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLF 340
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%)
Query: 12 TFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFERM 71
TF ++ AC AS SI L V + D L+D+ KCG D +F++M
Sbjct: 121 TFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKM 180
Query: 72 EDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ + SWT M+ G + Q A +FN+M
Sbjct: 181 PGRSIVSWTTMLYGLVSNSQLDSAEIVFNQM 211
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 73.9 bits (180), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 58/97 (59%)
Query: 6 MKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAM 65
+K N +F L+AC +H + V S + + ++L+A+L +ALVD+ AKCG + +
Sbjct: 161 IKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSR 220
Query: 66 GIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F ++ DV W AMI+G HG T+AIR+F+ M
Sbjct: 221 EVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEM 257
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 73.9 bits (180), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 60/99 (60%)
Query: 4 QGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDE 63
+G++ N T+ L AC SES+ + R + S ++ + +G+AL+ M AKCGF+ E
Sbjct: 480 EGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSE 539
Query: 64 AMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
A +F+ M +K++ SW AMI G+ +G +A++L RM
Sbjct: 540 AFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRM 578
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%)
Query: 9 NSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIF 68
N T +L AC +++ R V S + + ++ D +GT+L+DM AKCG + + +F
Sbjct: 283 NEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVF 342
Query: 69 ERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ M +++ +WT++I+ H G +AI LF M
Sbjct: 343 DGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIM 376
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 56/102 (54%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ + + N+ T V +L AC + ++ L + + + I + ++ + +G+ LV + KCG
Sbjct: 376 MKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGE 435
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+A + +++ +DV SWTAMISG G ++A+ M
Sbjct: 436 SRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEM 477
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 8 TNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGI 67
TN FV LL+ C L R V + + + + ++ ++LV A+CG L A+
Sbjct: 182 TNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALRA 240
Query: 68 FERMEDKDVKSWTAMISGHGVHGQPTKAIRLF 99
F+ ME+KDV SWTA+IS G KAI +F
Sbjct: 241 FDMMEEKDVISWTAVISACSRKGHGIKAIGMF 272
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 73.9 bits (180), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEA 64
GM N + G+LSAC S S + + F+E+ + AL+DM ++CG + A
Sbjct: 264 GMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMA 323
Query: 65 MGIFERMEDKD-VKSWTAMISGHGVHGQPTKAIRLFNRM 102
+FE M++K + SWT+MI+G +HGQ +A+RLFN M
Sbjct: 324 RLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEM 362
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 73.2 bits (178), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Query: 9 NSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIF 68
+ +T V LLSAC + S+ + H + E L+L+ LGTALVDM AK G L+ A +F
Sbjct: 213 DETTMVVLLSACGGNLSLGKLVHSQVMVRE--LELNCRLGTALVDMYAKSGGLEYARLVF 270
Query: 69 ERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
ERM DK+V +W+AMI G +G +A++LF++M
Sbjct: 271 ERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKM 304
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 73.2 bits (178), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 60/94 (63%)
Query: 9 NSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIF 68
N+ T +L A S ++ + + + + L+ D ++GT+++DM KCG ++ A F
Sbjct: 286 NAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAF 345
Query: 69 ERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+RM++K+V+SWTAMI+G+G+HG KA+ LF M
Sbjct: 346 DRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAM 379
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVR--HVTSFIEEEKLQLDAVLGTALVDMCAKC 58
MR + S+F + AC + I + H +F+ Q D + +AL+ M + C
Sbjct: 67 MRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVF--GYQSDIFVSSALIVMYSTC 124
Query: 59 GFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
G L++A +F+ + +++ SWT+MI G+ ++G A+ LF +
Sbjct: 125 GKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDL 168
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 73.2 bits (178), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 59/99 (59%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M++QG+K + F +L AC +I+ + + + I Q +G+AL+DM KC
Sbjct: 261 MKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKC 320
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLF 99
L A +F+RM+ K+V SWTAM+ G+G G+ +A+++F
Sbjct: 321 LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIF 359
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ G+ + T +SAC S+ L + +LV + KCG
Sbjct: 362 MQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGD 421
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+D++ +F M +D SWTAM+S + G+ + I+LF++M
Sbjct: 422 IDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKM 463
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 72.8 bits (177), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 59/102 (57%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M + K +S T V LL AC + S+ + + +I E + +++ L AL+DM AKCG
Sbjct: 524 MVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGH 583
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L+++ +F+ KD W MISG+G+HG AI LF++M
Sbjct: 584 LEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQM 625
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFI-EEEKLQLDAVLGTALVDMCAKCG 59
M + G + T ++SAC H+ V + + + +G + V +KCG
Sbjct: 116 MLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCG 175
Query: 60 FLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
FL +A +F+ M D+DV +WTA+ISGH +G+ + +M
Sbjct: 176 FLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKM 218
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 72.8 bits (177), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 62/98 (63%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEA 64
+K S V L AC + +++L + F+ +L+ ++ T+LVDM KCG LD+A
Sbjct: 229 NLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKA 288
Query: 65 MGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ IF++ME ++ +++AMISG +HG+ A+R+F++M
Sbjct: 289 LHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKM 326
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 55/102 (53%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M +G + ++ T+ LL AC +SI + + + + L+ D + +L++M +CG
Sbjct: 123 MMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGE 182
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
++ + +FE++E K SW++M+S G ++ + LF M
Sbjct: 183 MELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGM 224
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 72.0 bits (175), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 59/102 (57%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ K + T + LSAC ++ + + +IE+ L L+ LGT+LVDM AKCG
Sbjct: 380 MQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGN 439
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ EA+ +F ++ ++ ++TA+I G +HG + AI FN M
Sbjct: 440 ISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEM 481
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 59/102 (57%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M +G+K + T +GL+S+C ++ + +++E L++ L AL+DM +KCG
Sbjct: 248 MESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGD 307
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ EA IF+ +E + + SWT MISG+ G + +LF+ M
Sbjct: 308 IHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDM 349
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 72.0 bits (175), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 57/99 (57%)
Query: 4 QGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDE 63
G+K + +LSAC + ++ R V +I ++ D +GTA+VDM AKCG+++
Sbjct: 300 SGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIET 359
Query: 64 AMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
A+ IF + K+V +W A++ G +HG +++R F M
Sbjct: 360 ALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEM 398
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 6 MKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAM 65
++ N +T+V +L + + L + + I + + G AL+DM KC L +AM
Sbjct: 200 VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAM 259
Query: 66 GIFERMEDKDVKSWTAMISGHGVHGQPTK-AIRLFNRM 102
+F +E KD SW +MISG VH + +K AI LF+ M
Sbjct: 260 RVFGELEKKDKVSWNSMISGL-VHCERSKEAIDLFSLM 296
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 71.6 bits (174), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 58/99 (58%)
Query: 4 QGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDE 63
+G+ +S T V LLS+C ++++ + + + + + AL+DM AKCG L+
Sbjct: 202 EGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLEN 261
Query: 64 AMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
A+G+F M +DV +W +MI G+GVHG +AI F +M
Sbjct: 262 AIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKM 300
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 71.2 bits (173), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 53/99 (53%)
Query: 4 QGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDE 63
+G++ NSS L C ++ L R + + + L D T+L+ M KCG L +
Sbjct: 278 EGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGD 337
Query: 64 AMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
A +FE M+ KDV +W AMISG+ HG KA+ LF M
Sbjct: 338 AWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREM 376
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 70.5 bits (171), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 58/99 (58%)
Query: 4 QGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDE 63
+ ++ ++ + +SAC S+ R + ++ + D + +AL+DM AKCG ++
Sbjct: 317 KDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEG 376
Query: 64 AMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
A +F+R D+DV W+AMI G+G+HG+ +AI L+ M
Sbjct: 377 ARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM 415
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M++ + +S TF LL AC + + R V + + D + L+ + AKC
Sbjct: 110 MQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRR 169
Query: 61 LDEAMGIFE--RMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L A +FE + ++ + SWTA++S + +G+P +A+ +F++M
Sbjct: 170 LGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQM 213
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 55/102 (53%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR +K + V +L+A + + R + + + + L+++ L +L M AKCG
Sbjct: 213 MRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQ 272
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ A +F++M+ ++ W AMISG+ +G +AI +F+ M
Sbjct: 273 VATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEM 314
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 70.1 bits (170), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 61/102 (59%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ +G+ N + V ++S+C ++ ++ + + ++ +LGTALVDM +CG
Sbjct: 240 MKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGD 299
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+++A+ +FE + + D SW+++I G VHG KA+ F++M
Sbjct: 300 IEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQM 341
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%)
Query: 12 TFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFERM 71
TF L+ A E + + S I Q D + +LV M A CGF+ A IF +M
Sbjct: 119 TFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQM 178
Query: 72 EDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+DV SWT+M++G+ G A +F+ M
Sbjct: 179 GFRDVVSWTSMVAGYCKCGMVENAREMFDEM 209
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 70.1 bits (170), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 57/96 (59%)
Query: 7 KTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMG 66
K + T V +LSAC + S+ V +I++ ++++ L TALVDM +KCG +D+A+
Sbjct: 301 KPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALE 360
Query: 67 IFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F +DV +W ++IS VHG A+ +F+ M
Sbjct: 361 VFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEM 396
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 44 DAVLGTALVDMCAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
DAV +L+ + G +DEA +F+ ME+++V+SW MISG+ G +A +F+ M
Sbjct: 205 DAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSM 263
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 70.1 bits (170), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 58/102 (56%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M G+ ++ T +LSAC + ++ L + + + E LQ + + T LVDM KCG
Sbjct: 325 MEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGR 384
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
++EA+ +FE M K+ +W AMI+ + G +A+ LF+RM
Sbjct: 385 VEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM 426
Score = 63.2 bits (152), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M +G + + T V +L AC + R + +K+ L LG+ L+ M KCG
Sbjct: 224 MEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGD 283
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
LD A +F +M KD +WTAMI+ + +G+ ++A +LF M
Sbjct: 284 LDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEM 325
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 55/102 (53%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ G+K + T+ + AC E I + R V S + + L+ D + +L+ M AKCG
Sbjct: 123 MKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQ 182
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ A +F+ + ++D SW +MISG+ G A+ LF +M
Sbjct: 183 VGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKM 224
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 69.7 bits (169), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 57/100 (57%)
Query: 3 IQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLD 62
++ +K + T V L+S + + R V + +L+ DA L +AL+DM KCG ++
Sbjct: 361 VEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIE 420
Query: 63 EAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
A +F+ +KDV WT+MI+G HG +A++LF RM
Sbjct: 421 RAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRM 460
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 69.7 bits (169), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 57/102 (55%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M++ G++ + + + +L +C S+ L + + + E + AL++M +KCG
Sbjct: 232 MQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGV 291
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ +A+ +F +ME KDV SW+ MISG+ HG AI FN M
Sbjct: 292 ISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEM 333
Score = 48.5 bits (114), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%)
Query: 12 TFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFERM 71
TF + +C + S +L + V + + + V AL+DM K L +A +F+ M
Sbjct: 111 TFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEM 170
Query: 72 EDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
++DV SW +++SG+ GQ KA LF+ M
Sbjct: 171 YERDVISWNSLLSGYARLGQMKKAKGLFHLM 201
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 69.3 bits (168), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 55/98 (56%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEA 64
G + ++ T V +L C + + L + + F ++ + +G LVDM AKCG +DEA
Sbjct: 224 GCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEA 283
Query: 65 MGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F M KDV SW AM++G+ G+ A+RLF +M
Sbjct: 284 NTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKM 321
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Query: 7 KTNSSTFVGLLSACPASESIHLVRHVTSF-IEEEKLQLDAVLGTALVDMCAKCGFLDEAM 65
+ N+ T L AC + ++ + + + ++ + ++ + + L+DM AKCG + +A
Sbjct: 474 RPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDAR 533
Query: 66 GIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F+ M K+ +WT++++G+G+HG +A+ +F+ M
Sbjct: 534 LVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEM 570
Score = 54.3 bits (129), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 9/111 (8%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQL-------DAVLGTALVD 53
M G+K N T + +LS C + ++ + + + + + L + ++ L+D
Sbjct: 356 MLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLID 415
Query: 54 MCAKCGFLDEAMGIFERM--EDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
M AKC +D A +F+ + +++DV +WT MI G+ HG KA+ L + M
Sbjct: 416 MYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEM 466
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 15 GLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFERMEDK 74
G +S+ ES H + VT FI + +G ALV M ++C L +A +F+ M
Sbjct: 138 GEISSVRCGESAHALSLVTGFIS------NVFVGNALVAMYSRCRSLSDARKVFDEMSVW 191
Query: 75 DVKSWTAMISGHGVHGQPTKAIRLFNRM 102
DV SW ++I + G+P A+ +F+RM
Sbjct: 192 DVVSWNSIIESYAKLGKPKVALEMFSRM 219
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 68.9 bits (167), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%)
Query: 9 NSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIF 68
NS T V +L AC + ++ + + +I L + +ALV M +CG L+ +F
Sbjct: 284 NSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVF 343
Query: 69 ERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+RM D+DV SW ++IS +GVHG KAI++F M
Sbjct: 344 DRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEM 377
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 4/102 (3%)
Query: 5 GMKTNSSTFVGLLSACPASESI--HLVR--HVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
G++++ T+ +L AC ASE HL++ + + + + T LVDM A+ G
Sbjct: 173 GVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGC 232
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+D A +F M ++V SW+AMI+ + +G+ +A+R F M
Sbjct: 233 VDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREM 274
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 68.9 bits (167), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 60/102 (58%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M ++ ++ + T + +LSAC S+ L + S+++ + L A++DM AK G
Sbjct: 241 MLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGN 300
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ +A+ +FE + +++V +WT +I+G HG +A+ +FNRM
Sbjct: 301 ITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRM 342
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 68.6 bits (166), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ G + + T VG+L AC S+ R V +I + + LD V TAL+DM +KCG
Sbjct: 309 MQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGA 367
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L + IFE + KD+ W MIS +G+HG + + LF +M
Sbjct: 368 LSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKM 409
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ +G + +GLL A + R V ++ L ++ V+ T+LVDM AK GF
Sbjct: 208 MQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGF 267
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKA 95
++ A +F RM K SW ++ISG +G KA
Sbjct: 268 IEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKA 302
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 52/102 (50%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M + ++ +SSTF + AC + + V + + D + ++++++ KCG
Sbjct: 107 MIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGK 166
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+DEA +F +M +DV WT M++G G+ KA+ + M
Sbjct: 167 MDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREM 208
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 68.6 bits (166), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 58/99 (58%)
Query: 4 QGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDE 63
+G+ + T + + SAC ++ L + + +IE+ +QLD LGT LVDM ++CG +
Sbjct: 464 EGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPES 523
Query: 64 AMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
AM IF + ++DV +WTA I + G +AI LF+ M
Sbjct: 524 AMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDM 562
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M G+ + TF LSAC S + + I + D + +LV A+CG
Sbjct: 125 MMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGE 184
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
LD A +F+ M +++V SWT+MI G+ A+ LF RM
Sbjct: 185 LDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM 226
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 53/102 (51%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
+R + + NS T V ++SAC E + V +FI ++++ ++ +ALVDM KC
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNA 286
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+D A +F+ ++ AM S + G +A+ +FN M
Sbjct: 287 IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLM 328
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Query: 4 QGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDA-VLGTALVDMCAKCGFLD 62
+ +K + VGL+SAC L V S++ + + + + AL+DM AKCG +D
Sbjct: 298 KNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMD 357
Query: 63 EAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
A +FE M +D+ S+ +M+ G +HG ++AIRLF +M
Sbjct: 358 RAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKM 397
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%)
Query: 38 EEKLQLDAVLGTALVDMCAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIR 97
+E + D + T+++D AK G + A +FE DV++W+A+I G+ +GQP +A +
Sbjct: 231 DEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFK 290
Query: 98 LFNRM 102
+F+ M
Sbjct: 291 VFSEM 295
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR + + TF ++ C + + + V + D V+GT+ VD KC
Sbjct: 101 MRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKD 160
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L A +F M +++ SWTA++ + G+ +A +F+ M
Sbjct: 161 LFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLM 202
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 55/102 (53%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ G+ N T +L AC + ++ L + V + L+ +G+AL M +KCG
Sbjct: 414 MKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGS 473
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L++ +F R +KDV SW AMISG +GQ +A+ LF M
Sbjct: 474 LEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEM 515
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEA 64
G+K + T VG+L+AC + + + SF+ + + TALVDM AK G L +A
Sbjct: 317 GIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADA 376
Query: 65 MGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
F+ ++++DV WT++ISG+ + +A+ L+ RM
Sbjct: 377 RKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRM 414
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 54/100 (54%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR Q + N+ T G+ A + +S + R + + + D + T+LV M K G
Sbjct: 109 MRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGL 168
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFN 100
+++ + +F M +++ +W+ M+SG+ G+ +AI++FN
Sbjct: 169 VEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFN 208
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 52/90 (57%)
Query: 13 FVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFERME 72
F +LS+ A+ + L R + + L L ALV M +KC L+EA +F+
Sbjct: 224 FTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSG 283
Query: 73 DKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
D++ +W+AM++G+ +G+ +A++LF+RM
Sbjct: 284 DRNSITWSAMVTGYSQNGESLEAVKLFSRM 313
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 58/99 (58%)
Query: 4 QGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDE 63
+G+ + T + + SAC ++ L + + +IE+ +QLD LGT LVDM ++CG +
Sbjct: 464 EGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPES 523
Query: 64 AMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
AM IF + ++DV +WTA I + G +AI LF+ M
Sbjct: 524 AMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDM 562
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M G+ + TF LSAC S + + I + D + +LV A+CG
Sbjct: 125 MMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGE 184
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
LD A +F+ M +++V SWT+MI G+ A+ LF RM
Sbjct: 185 LDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM 226
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 53/102 (51%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
+R + + NS T V ++SAC E + V +FI ++++ ++ +ALVDM KC
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNA 286
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+D A +F+ ++ AM S + G +A+ +FN M
Sbjct: 287 IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLM 328
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 6 MKTN----SSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFL 61
MKTN ST V ++SAC S SI L R V +I++ + + AL+D+ +KCG L
Sbjct: 258 MKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEL 317
Query: 62 DEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ A G+FER+ KDV SW +I G+ +A+ LF M
Sbjct: 318 ETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEM 358
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEE--EKLQLDAVLGTALVDMCAKCGFLD 62
G N T + +L AC +I + R + +I++ + + + L T+L+DM AKCG ++
Sbjct: 362 GETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIE 421
Query: 63 EAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
A +F + K + SW AMI G +HG+ + LF+RM
Sbjct: 422 AAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRM 461
Score = 52.8 bits (125), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 53/98 (54%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEA 64
G+ NS TF +L +C S++ + + + + LD + T+L+ M + G L++A
Sbjct: 129 GLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDA 188
Query: 65 MGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F++ +DV S+TA+I G+ G A +LF+ +
Sbjct: 189 HKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEI 226
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 44 DAVLGTALVDMCAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
D V TAL+ A G+++ A +F+ + KDV SW AMISG+ G +A+ LF M
Sbjct: 199 DVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM 257
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 67.8 bits (164), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 56/102 (54%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR ++ + STF +L A + S+ L + + +FI + G+ LVDM AKCG
Sbjct: 443 MRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGS 502
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ +A+ +FE M D++ SW A+IS H +G AI F +M
Sbjct: 503 IKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKM 544
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 8/64 (12%)
Query: 44 DAVL--GTALVDMCAKCGFLDEAMGIFERMEDKDVKSWTAMISGH---GVHGQPTKAIRL 98
D++L G +LVDM AKC +EA IF+ + + SWTA+ISG+ G+HG ++L
Sbjct: 383 DSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHG---AGLKL 439
Query: 99 FNRM 102
F +M
Sbjct: 440 FTKM 443
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 67.4 bits (163), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%)
Query: 16 LLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFERMEDKD 75
LL C + + R V + I + + D V+G L++M AKCG L+EA +FE+M +D
Sbjct: 66 LLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRD 125
Query: 76 VKSWTAMISGHGVHGQPTKAIRLFNRM 102
+WT +ISG+ H +P A+ FN+M
Sbjct: 126 FVTWTTLISGYSQHDRPCDALLFFNQM 152
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 53/98 (54%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEA 64
G + + ++ L AC ++ + + V +++ + +L A G L+DM AK G + +A
Sbjct: 257 GFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDA 316
Query: 65 MGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
IF+R+ +DV SW ++++ + HG +A+ F M
Sbjct: 317 RKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM 354
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%)
Query: 47 LGTALVDMCAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+G+AL+D+ + G +D+A +F+ +E ++ SW A+I+GH KA+ LF M
Sbjct: 198 VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGM 253
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 67.4 bits (163), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKL--QLDAVLGTALVDMCAKCGFLD 62
G++ +T V +LSA + + + V +IE+ ++D +GTALVDM +KCG L+
Sbjct: 215 GVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLN 274
Query: 63 EAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
A +FE M+ K+V +WT+M +G ++G+ + L NRM
Sbjct: 275 NAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRM 314
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 67.4 bits (163), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 59/98 (60%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEA 64
G+K +S V +LSAC + + ++EE ++Q ++ + T LV++ AKCG +++A
Sbjct: 207 GVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKA 266
Query: 65 MGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F+ M +KD+ +W+ MI G+ + P + I LF +M
Sbjct: 267 RSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQM 304
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 54/102 (52%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
+R G+ + TF +L AC + S L + S + + D T+L+ + + G
Sbjct: 102 IRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGR 161
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L++A +F+ + D+ V +WTA+ SG+ G+ +AI LF +M
Sbjct: 162 LNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKM 203
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 51/101 (50%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M + +K + + VG LS+C + ++ L S I+ + + + AL+DM AKCG
Sbjct: 304 MLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGA 363
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNR 101
+ +F+ M++KD+ A ISG +G + +F +
Sbjct: 364 MARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQ 404
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 67.4 bits (163), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ G +T +L AC + L + + + K D +L ALVDM KCG
Sbjct: 251 MKRAGFIAEQATLTSVLRACTGLALLEL--GMQAHVHIVKYDQDLILNNALVDMYCKCGS 308
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L++A+ +F +M+++DV +W+ MISG +G +A++LF RM
Sbjct: 309 LEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERM 350
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEA 64
++ N T+ +L +C VR + I +E L+ D + +AL+D+ AK G ++A
Sbjct: 157 NVRPNVYTYSSVLRSCNGMSD---VRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDA 213
Query: 65 MGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ +F+ M D W ++I G + + A+ LF RM
Sbjct: 214 LSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRM 251
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 67.4 bits (163), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 56/97 (57%)
Query: 6 MKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAM 65
+K NS T + +L +C A ++ + + ++ + L D +G+ALVDM AKCG L +
Sbjct: 513 LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 572
Query: 66 GIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F+++ K+V +W +I +G+HG +AI L M
Sbjct: 573 KVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMM 609
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEA 64
G+ NS+T G++ AC S + + F+ + L D + L+DM ++ G +D A
Sbjct: 400 GLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIA 459
Query: 65 MGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
M IF +MED+D+ +W MI+G+ A+ L ++M
Sbjct: 460 MRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM 497
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSF-IEEEKLQLDAVLGTALVDMCAKCG 59
M ++G++ + T +L AC E + + + ++ ++ L ++ +G+ALVDM C
Sbjct: 293 MVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCK 352
Query: 60 FLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLF 99
+ +F+ M D+ + W AMI+G+ + +A+ LF
Sbjct: 353 QVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF 392
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 67.0 bits (162), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 55/102 (53%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR G++ + +T +G+L+AC ++ + ++ + AL+DM KCG
Sbjct: 400 MRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGK 459
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
LD A +F+ M +D+ SW M+ G G+HG +A+ LFN M
Sbjct: 460 LDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSM 501
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%)
Query: 4 QGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDE 63
G++ T+ +L AC +I + + S + D + TALVD AKCG L+
Sbjct: 97 SGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEM 156
Query: 64 AMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLF 99
A+ +F+ M +D+ +W AMISG +H T I LF
Sbjct: 157 AIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLF 192
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 67.0 bits (162), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%)
Query: 9 NSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIF 68
NS T+ + AC ++ V + + L +AL+ M +KCG LD+A +F
Sbjct: 386 NSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVF 445
Query: 69 ERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
E M++ D+ +WTA ISGH +G ++A+RLF +M
Sbjct: 446 ESMDNPDIVAWTAFISGHAYYGNASEALRLFEKM 479
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 55/99 (55%)
Query: 4 QGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDE 63
+G++ +S F +L AC + E ++L + + + + + L+ + +GT LVD KC +
Sbjct: 279 EGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFES 338
Query: 64 AMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
A F+ + + + SW+A+ISG+ Q +A++ F +
Sbjct: 339 ACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSL 377
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 67.0 bits (162), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 54/97 (55%)
Query: 6 MKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAM 65
++ N T V +LSAC + ++ L + + +F L D + +LVD+ KCG L+EA
Sbjct: 256 IRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEAS 315
Query: 66 GIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F+ K + +W +MI+ +HG+ +AI +F M
Sbjct: 316 SVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEM 352
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 67.0 bits (162), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 59/102 (57%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M + G+ N+ T + +SAC + I+ V S + D ++G +LVDM +KCG
Sbjct: 343 MFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGK 402
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L++A +F+ +++KDV +W +MI+G+ G KA LF RM
Sbjct: 403 LEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRM 444
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ NS T + LL AC +VR + + L + AL D AK G
Sbjct: 515 MQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGD 574
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
++ + IF ME KD+ +W ++I G+ +HG A+ LFN+M
Sbjct: 575 IEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQM 616
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 9/103 (8%)
Query: 4 QGMKTNSSTFVGLLSACPASESIHLVRHVTS----FIEEEKLQLDAVLGTALVDMCAKCG 59
QG K ST++ LL +C S SIHL R + + F E D + T L+ M AKCG
Sbjct: 75 QGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTEP-----DVFVETKLLSMYAKCG 129
Query: 60 FLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ +A +F+ M ++++ +W+AMI + + + +LF M
Sbjct: 130 CIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLM 172
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 67.0 bits (162), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 56/98 (57%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEA 64
G + +S + +LSA + ++ V + L+ D V+G+ALVDM +KCG LD A
Sbjct: 614 GQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYA 673
Query: 65 MGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ F M ++ SW +MISG+ HGQ +A++LF M
Sbjct: 674 LRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETM 711
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Query: 4 QGMKTNSSTFVGLLSACPASESIHLV--RHVTSFIEEEKLQLDAVLGTALVDMCAKC-GF 60
+G+ +N FV +L AC S+ ++ R + + + +DAV+ L+ M KC G
Sbjct: 96 EGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGS 155
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ A+ F +E K+ SW ++IS + G A R+F+ M
Sbjct: 156 VGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSM 197
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 67.0 bits (162), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%)
Query: 6 MKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAM 65
+K + F ++ AC ++HL + + ++ + + +ALVDM +KCG + A
Sbjct: 339 VKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAAR 398
Query: 66 GIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
IF+RM D SWTA+I GH +HG +A+ LF M
Sbjct: 399 KIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEM 435
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 23 SESIHLVR--HVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFERMEDKDVKSWT 80
SE + +++ + ++ + + D +G++LVDM AK ++++ +F R+ +D SW
Sbjct: 253 SEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWN 312
Query: 81 AMISGHGVHGQPTKAIRLFNRM 102
++++G+ +G+ +A+RLF +M
Sbjct: 313 SLVAGYVQNGRYNEALRLFRQM 334
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
++ +GM+ N+ T + LL C S+HLVR +I L D L L+D+ AKCG
Sbjct: 559 IQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGS 617
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L A +F+ +D+ +TAM++G+ VHG+ +A+ +++ M
Sbjct: 618 LKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHM 659
Score = 52.0 bits (123), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 7 KTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFL-DEAM 65
K +S TF +L C + + + S+I + L+ D ++G ALV M AK GF+ +A
Sbjct: 119 KPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAY 178
Query: 66 GIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
F+ + DKDV SW A+I+G + A R F M
Sbjct: 179 TAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLM 215
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEK-LQLDAVLGTALVDMCAKCG 59
M ++G++ + + L+AC ++ + + F+++++ ++ D +GTALVDM AKCG
Sbjct: 209 MLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCG 268
Query: 60 FLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
++ A+ +FE++ ++V SW A+I G+ +G KA +R+
Sbjct: 269 CIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRI 311
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSF-------IEEEKLQLDAVLGTALVDMCAK 57
G N T +LSAC S ++ + R V + + EE D ++GTALVDM AK
Sbjct: 239 GHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAK 298
Query: 58 CGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
CG +D +M +F M ++V +W A+ SG +HG+ I +F +M
Sbjct: 299 CGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM 343
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 66.2 bits (160), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 55/95 (57%)
Query: 4 QGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDE 63
+ + + +T V +L C + + + R+V +EE++L + ALV+M KCG +DE
Sbjct: 212 ESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDE 271
Query: 64 AMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRL 98
A +F+RME +DV +WT MI+G+ G A+ L
Sbjct: 272 ARFVFDRMERRDVITWTCMINGYTEDGDVENALEL 306
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR + ++ N +T LL A A + ++ ++ + T LV + +KCG
Sbjct: 411 MRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGT 470
Query: 61 LDEAMGIF----ERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L+ A IF E+ + KDV W A+ISG+G+HG A+++F M
Sbjct: 471 LESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEM 516
Score = 45.4 bits (106), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 52/102 (50%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ +G++ N+ T L+S C + ++ + + + +++ D ++ T+L+ M AKC
Sbjct: 310 MQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKR 369
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+D +F W+A+I+G + + A+ LF RM
Sbjct: 370 VDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRM 411
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 66.2 bits (160), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 58/102 (56%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ +G + ++ T +LSAC S + + R V S I ++L+ + AL+DM AKCG
Sbjct: 265 MQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGD 324
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L+ A +FE + + V +MIS +HG+ +A+ +F+ M
Sbjct: 325 LENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTM 366
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 44 DAVLGTALVDMCAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
D ++G++L+ M KCG + A +F+ M +++V +W AMI G+ +G A LF +
Sbjct: 80 DVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEI 138
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 65.9 bits (159), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M +G N +F +LSAC ++ V S I + D +G+ALVDM +KCG
Sbjct: 143 MHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGN 202
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+++A +F+ M D++V SW ++I+ +G +A+ +F M
Sbjct: 203 VNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMM 244
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 12 TFVGLLSACPASESIHL--------VRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDE 63
+F +L AC +HL ++H F E + D +G +L+DM KCG ++E
Sbjct: 388 SFANILKACADLAELHLGMQAHVHVLKHGFKFQSGE--EDDIFVGNSLIDMYVKCGCVEE 445
Query: 64 AMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F +M ++D SW AMI G +G +A+ LF M
Sbjct: 446 GYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREM 484
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 12 TFVGLLSACPASESIHLVRHVTS-FIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFER 70
T ++SAC + +I + + V ++ +KL+ D +L A VDM AKC + EA IF+
Sbjct: 255 TLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDS 314
Query: 71 MEDKDVKSWTAMISGHGVHGQPTKAIRL-FNRM 102
M ++V + T+MISG+ + TKA RL F +M
Sbjct: 315 MPIRNVIAETSMISGYAM-AASTKAARLMFTKM 346
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 8 TNSSTFVGLLSACPASE-SIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMG 66
T+SS F LL +C S+ S VR+V + + + + + L+D +KCG L++
Sbjct: 17 TDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQ 76
Query: 67 IFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F++M +++ +W ++++G G +A LF M
Sbjct: 77 VFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSM 112
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 65.9 bits (159), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 52/102 (50%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR N TF LLSAC S ++ R V L+ + +L+ M KCG
Sbjct: 212 MRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGD 271
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L +A IF++ +KDV SW +MI+G+ HG +AI LF M
Sbjct: 272 LKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELM 313
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 65.9 bits (159), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 57/98 (58%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEA 64
G+ + T+ +L C S L + + + + +++LQ D + + LVDM +KCG L ++
Sbjct: 598 GITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDS 657
Query: 65 MGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+FE+ +D +W AMI G+ HG+ +AI+LF RM
Sbjct: 658 RLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERM 695
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 46/98 (46%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEA 64
G+ + + G+ AC + + + + L LD + A +DM KC L EA
Sbjct: 377 GLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEA 436
Query: 65 MGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F+ M +D SW A+I+ H +G+ + + LF M
Sbjct: 437 FRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSM 474
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 50/95 (52%)
Query: 8 TNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGI 67
+ S + +L +C A + L + + + D ++ TA +DM AKC + +A +
Sbjct: 279 VSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQIL 338
Query: 68 FERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
F+ E+ + +S+ AMI+G+ KA+ LF+R+
Sbjct: 339 FDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRL 373
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 65.9 bits (159), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 5 GMKTNSSTFVGLLSACPASE-SIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDE 63
G+K N TF +L+ C A+ S+ + F + +L + +AL+ M AK G ++
Sbjct: 489 GIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIES 548
Query: 64 AMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
A +F+R +KD+ SW +MISG+ HGQ KA+ +F M
Sbjct: 549 AEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEM 587
Score = 59.3 bits (142), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 58/102 (56%), Gaps = 4/102 (3%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ +G++ N T+ +L+A P V + + + + + +GTAL+D K G
Sbjct: 388 MKRKGVRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGK 443
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
++EA +F ++DKD+ +W+AM++G+ G+ AI++F +
Sbjct: 444 VEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGEL 485
Score = 45.4 bits (106), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 50/102 (49%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ +G + NS TF L V + + + L + +L+++ KCG
Sbjct: 185 MQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGN 244
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ +A +F++ E K V +W +MISG+ +G +A+ +F M
Sbjct: 245 VRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM 286
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 65.9 bits (159), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 53/102 (51%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ N T +LSAC ++ L + V + + + TAL+ M AKCG
Sbjct: 411 MQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGS 470
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ EA +F+ M K+ +W MISG+G+HGQ +A+ +F M
Sbjct: 471 IAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEM 512
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
+ + G + SST V L+ P S + L+ + + + A + TAL + +K
Sbjct: 313 LMLSGARLRSSTLVSLV---PVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNE 369
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
++ A +F+ +K + SW AMISG+ +G AI LF M
Sbjct: 370 IESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREM 411
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 65.1 bits (157), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR + +K ++ T+V +++A H + + + L + + TALVDM AKCG
Sbjct: 429 MRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGA 488
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ A IF+ M ++ V +W AMI G+G HG A+ LF M
Sbjct: 489 IMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEM 530
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 12 TFVGLLSACPASESIHLV---RHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIF 68
+F+ ++S PA ++ L+ + + + + TALVDM AKCG L+ A +F
Sbjct: 235 SFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLF 294
Query: 69 ERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ M +++V SW +MI + + P +A+ +F +M
Sbjct: 295 DGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKM 328
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 49/102 (48%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR ++ F LL C + + + + + + LD T L +M AKC
Sbjct: 126 MRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQ 185
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
++EA +F+RM ++D+ SW +++G+ +G A+ + M
Sbjct: 186 VNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSM 227
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%)
Query: 4 QGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDE 63
+G+K + +G L AC + R + E L + + +L+ M KC +D
Sbjct: 331 EGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDT 390
Query: 64 AMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
A +F +++ + + SW AMI G +G+P A+ F++M
Sbjct: 391 AASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM 429
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 65.1 bits (157), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 50/102 (49%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ G + N+ TF + AC + V + + + D +GTA VDM KC
Sbjct: 43 MKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNS 102
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+D A +FERM ++D +W AM+SG G KA LF M
Sbjct: 103 VDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREM 144
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVL-GTALVDMCAKCGFLDE 63
G K + T + L+S C S+ + + + + + D V+ AL+DM +KCG + E
Sbjct: 352 GEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHE 411
Query: 64 AMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
A IF+ +K V +WT MI+G+ ++G +A++LF++M
Sbjct: 412 ARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKM 450
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 65.1 bits (157), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEA 64
G+K + + ++SAC + + V S I L+ + + AL++M AKCG LD
Sbjct: 339 GIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDAT 398
Query: 65 MGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+FE+M ++V SW++MI+ +HG+ + A+ LF RM
Sbjct: 399 RDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARM 436
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 31/133 (23%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCA---- 56
M+ + + ++SAC + ++ R + F+ E +++D L TALV M A
Sbjct: 203 MKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGC 262
Query: 57 ---------------------------KCGFLDEAMGIFERMEDKDVKSWTAMISGHGVH 89
KCG LD+A IF++ E KD+ WT MIS +
Sbjct: 263 MDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVES 322
Query: 90 GQPTKAIRLFNRM 102
P +A+R+F M
Sbjct: 323 DYPQEALRVFEEM 335
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 57/102 (55%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+I G+ +S T LLSAC +S+ L + V FI L+ D + +++ + CG
Sbjct: 487 MKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGE 546
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L +F+ MEDK + SW +I+G+ +G P +A+ +F +M
Sbjct: 547 LCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQM 588
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 57/102 (55%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M + G++ + + + AC S+ L R ++ + L+ DA + +L+DM AK G
Sbjct: 588 MVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGS 647
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ ++ +F +++K SW AMI G+G+HG +AI+LF M
Sbjct: 648 ITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEM 689
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%)
Query: 11 STFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFER 70
+T V +L C I L + V + + +L + VL AL+DM +KCG + A IF+
Sbjct: 293 ATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKM 352
Query: 71 MEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+K+V SW M+ G G + +M
Sbjct: 353 NNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQM 384
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEK-LQLDAVLGTALVDMCAKCG 59
M ++G++ + + L+AC ++ + + F++++ ++ D +GTALVDM AKCG
Sbjct: 209 MLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCG 268
Query: 60 FLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
++ A+ +F+++ ++V SW A+I G+ +G KA+ R+
Sbjct: 269 CIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERL 311
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 9 NSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQL-DAVLGTALVDMCAKCGFLDEAMGI 67
N+ T + LL+AC S + + L + D +GT++VD AKCG ++ A
Sbjct: 425 NAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRT 484
Query: 68 FERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
F+++ +K++ SWT +IS + ++G P KA+ LF+ M
Sbjct: 485 FDQITEKNIISWTVIISAYAINGLPDKALALFDEM 519
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEK--LQLDAVLGTALVDMCAKCGFLD 62
G+K +ST+ LLS+ A+ ++ +H+ I + D +L +LV M AKCG ++
Sbjct: 461 GLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIE 520
Query: 63 EAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+A IF +M KD SW +MI G HG KA+ LF M
Sbjct: 521 DAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEM 560
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 64.3 bits (155), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEA 64
G++ N +T+V ++SAC L R + I+E++++L+ + TAL+DM AKC + A
Sbjct: 259 GVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSA 318
Query: 65 MGIFERM-EDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
IF + +++ +W AMISG+ G + A +LF+ M
Sbjct: 319 RRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTM 357
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 44 DAVLGTALVDMCAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
D V T ++ AK L+ A F+RM +K V SW AM+SG+ +G A+RLFN M
Sbjct: 197 DVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDM 255
Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 51/96 (53%)
Query: 7 KTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMG 66
K + T + +LSAC + L + +I + +++L+ +L+ M A+ G L EA
Sbjct: 395 KPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKR 454
Query: 67 IFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F+ M+++DV S+ + + +G + + L ++M
Sbjct: 455 VFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKM 490
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 64.3 bits (155), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 58/102 (56%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M +G+K + T V LLSAC ++ L + V ++ + L + L+D+ A+CG
Sbjct: 213 MNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGR 272
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
++EA +F+ M DK+ SWT++I G V+G +AI LF M
Sbjct: 273 VEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 314
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Query: 1 MRIQGM-KTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCG 59
MR+ G+ + ++ T+ L+ A + L + S + + +L+ + A CG
Sbjct: 111 MRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCG 170
Query: 60 FLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ A +F++M +KD+ +W ++I+G +G+P +A+ L+ M
Sbjct: 171 DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 64.3 bits (155), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Query: 6 MKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAM 65
++ N T +LSAC ++ + V ++I++ +++D VLGTAL+DM AKCG L+ A
Sbjct: 195 VRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAK 254
Query: 66 GIFERM-EDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F + KDVK+++AMI ++G + +LF+ M
Sbjct: 255 RVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEM 292
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Query: 4 QGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDE 63
QG N TF L++AC +++ + + I + L AL+DM AKCG + +
Sbjct: 307 QGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPD 366
Query: 64 AMGIF-ERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ +F E ++ +++ SWT+M+ G+G HG +A+ LF++M
Sbjct: 367 SQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKM 406
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 64.3 bits (155), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 58/102 (56%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M +G+K + T V LLSAC ++ L + V ++ + L + L+D+ A+CG
Sbjct: 80 MNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGR 139
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
++EA +F+ M DK+ SWT++I G V+G +AI LF M
Sbjct: 140 VEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 181
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 55/91 (60%)
Query: 12 TFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFERM 71
T++ L+ AC +S S+ R + I + D +L ++ M KCG L +A +F+ M
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 72 EDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
++++ S+T++I+G+ +GQ +AIRL+ +M
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKM 159
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%)
Query: 9 NSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIF 68
N F L AC + + + +L +A+ G +L DM A+CGFL+ A +F
Sbjct: 269 NEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVF 328
Query: 69 ERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+++E D SW +I+G +G +A+ +F++M
Sbjct: 329 DQIERPDTASWNVIIAGLANNGYADEAVSVFSQM 362
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%)
Query: 12 TFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFERM 71
T LL C S+ L V + + L + + L+DM AKCG L +A IF+ M
Sbjct: 475 TMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSM 534
Query: 72 EDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+++DV SW+ +I G+ G +A+ LF M
Sbjct: 535 DNRDVVSWSTLIVGYAQSGFGEEALILFKEM 565
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%)
Query: 9 NSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIF 68
+ T +L AC + + R + +I D + +LVDM AKCG L A +F
Sbjct: 498 DERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLF 557
Query: 69 ERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ + KD+ SWT MI+G+G+HG +AI LFN+M
Sbjct: 558 DDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQM 591
Score = 63.2 bits (152), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M + G++ + +T V + + C S I L R V S + + L+DM +KCG
Sbjct: 287 MLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGD 346
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
LD A +F M D+ V S+T+MI+G+ G +A++LF M
Sbjct: 347 LDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388
Score = 62.4 bits (150), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M +G+ + T +L+ C + + V +I+E L D + AL+DM AKCG
Sbjct: 388 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGS 447
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFN 100
+ EA +F M KD+ SW +I G+ + +A+ LFN
Sbjct: 448 MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFN 487
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 53/102 (51%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+I+ + N T+ +L C + L + S I + QL+A + + L+DM AK G
Sbjct: 481 MQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGK 540
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
LD A I R KDV SWT MI+G+ + KA+ F +M
Sbjct: 541 LDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQM 582
Score = 55.8 bits (133), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Query: 1 MRIQGMKTNSSTFVGLLSACPA-SESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCG 59
M + + N TF G+L AC S + +V + + I + L+ V+ L+D+ ++ G
Sbjct: 177 MVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNG 236
Query: 60 FLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
F+D A +F+ + KD SW AMISG + +AIRLF M
Sbjct: 237 FVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDM 279
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 52/102 (50%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M +G+ N+ TF + A + ++ + V + I + + + AL+ M AKCG
Sbjct: 683 MNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGS 742
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ +A F + K+ SW A+I+ + HG ++A+ F++M
Sbjct: 743 ISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQM 784
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 8 TNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGI 67
TN+ + L A + IH V+ F + Q ALV + ++CG ++E+
Sbjct: 595 TNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQ------NALVTLYSRCGKIEESYLA 648
Query: 68 FERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
FE+ E D +W A++SG G +A+R+F RM
Sbjct: 649 FEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRM 683
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 45/102 (44%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M + G+ F +LSAC ES+ + + + + D + ALV + G
Sbjct: 279 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGN 338
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L A IF M +D ++ +I+G G KA+ LF RM
Sbjct: 339 LISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM 380
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 52/102 (50%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M + G++ +S+T L+ AC A ++ + + ++ + + + AL+++ AKC
Sbjct: 380 MHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD 439
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
++ A+ F E ++V W M+ +G+ + R+F +M
Sbjct: 440 IETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQM 481
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 8/106 (7%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQL----DAVLGTALVDMCA 56
M+I G + N TFV +LS+C S +R I E +++ + ++L+ M +
Sbjct: 183 MKISGCRPNKITFVTVLSSC----SDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYS 238
Query: 57 KCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
KCG L +A F ED+D W++MIS +G HGQ +AI LFN M
Sbjct: 239 KCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTM 284
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 63.2 bits (152), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 53/96 (55%)
Query: 7 KTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMG 66
K N T + L+SAC A + L++ + S+ ++ L + LV+ +CG +
Sbjct: 179 KPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQL 238
Query: 67 IFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F+ MED+DV +W+++IS + +HG A++ F M
Sbjct: 239 VFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEM 274
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 63.2 bits (152), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 57/102 (55%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ QG++ T + +LS C + S+H + V + + + +D + + L+ M KCG
Sbjct: 322 MQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGE 381
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L ++ IF+R KD+ W ++ISG+ HG +A+++F M
Sbjct: 382 LVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEM 423
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 62.8 bits (151), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 56/102 (54%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ QG++ + + + +LS C S+ R V + + + D + + L+ M KCG
Sbjct: 322 MQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGE 381
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L +A +F+R KD+ W ++ISG+ HG +A+++F+ M
Sbjct: 382 LVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEM 423
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 58/94 (61%)
Query: 7 KTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMG 66
+ +S T V LL AC ++ ++ + + + + ++ +++ TALVDM +KCG+L+ A
Sbjct: 445 QVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQR 504
Query: 67 IFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFN 100
F+ + KDV SW +I+G+G HG+ A+ +++
Sbjct: 505 CFDSISWKDVVSWGILIAGYGFHGKGDIALEIYS 538
Score = 62.4 bits (150), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEA 64
G +S ++++C S L V ++ LD +L+ M AKCG LD++
Sbjct: 341 GSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKS 400
Query: 65 MGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ IFERM ++D+ SW A+ISG+ + KA+ LF M
Sbjct: 401 LVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEM 438
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR G++ + TF LS + + R + I + +D L TAL+ M KCG
Sbjct: 236 MRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGK 295
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ + + E + +KDV WT MISG G+ KA+ +F+ M
Sbjct: 296 EEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEM 337
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%)
Query: 9 NSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIF 68
++ TF LL AC + + + + + D + ++LV++ AK G L A +F
Sbjct: 45 DTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVF 104
Query: 69 ERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
E M ++DV WTAMI + G +A L N M
Sbjct: 105 EEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEM 138
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR QG+K T + +LS I ++ + F D + +++++ KC
Sbjct: 138 MRFQGIKPGPVTLLEMLSGVL---EITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDH 194
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ +A +F++ME +D+ SW MISG+ G ++ ++L RM
Sbjct: 195 VGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRM 236
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 51/102 (50%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
R G+K N +F GLL+AC S + L R + + VL +++D AKCG
Sbjct: 170 FRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQ 229
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
++ A F+ M KD+ WT +ISG+ G A +LF M
Sbjct: 230 MESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEM 271
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEA 64
G+K TF L A + S+ + + ++ ++ +A++ ++L+DM +K G L+ +
Sbjct: 306 GVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEAS 365
Query: 65 MGIFERMEDK-DVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F +DK D W MIS HG KA+R+ + M
Sbjct: 366 ERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDM 404
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 7 KTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMG 66
+ N TFV ++AC + ++ R + + +++ Q + ++GTAL+DM +KC A
Sbjct: 228 EPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYI 287
Query: 67 IFERMED-KDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F ++D +++ SW ++ISG ++GQ A+ LF ++
Sbjct: 288 VFTELKDTRNLISWNSVISGMMINGQHETAVELFEKL 324
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 16 LLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFERME--D 73
LLSAC ++ + + + + + D + T+L+DM KCG A IF+R E
Sbjct: 374 LLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKP 433
Query: 74 KDVKSWTAMISGHGVHGQPTKAIRLF 99
KD W MISG+G HG+ AI +F
Sbjct: 434 KDPVFWNVMISGYGKHGECESAIEIF 459
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%)
Query: 6 MKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAM 65
+ T+ + ++SAC + S+ L V + L D V+ ++L+D+ KCGF++
Sbjct: 446 LPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGR 505
Query: 66 GIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F+ M D W +MISG+ +GQ +AI LF +M
Sbjct: 506 RVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKM 542
Score = 48.5 bits (114), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 10 SSTFVGLLSACPAS-ESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIF 68
+ST + + S C + E+ L V S+ D +L +++ + CG +D+A +F
Sbjct: 356 ASTLLDMYSKCGSPMEACKLFSEVESY--------DTILLNSMIKVYFSCGRIDDAKRVF 407
Query: 69 ERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
ER+E+K + SW +M +G +G + + F++M
Sbjct: 408 ERIENKSLISWNSMTNGFSQNGCTVETLEYFHQM 441
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 62.4 bits (150), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%)
Query: 6 MKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAM 65
++ + F L+ AC SI R V + D V+ ++LVDM AKCG L+ A
Sbjct: 101 LRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAK 160
Query: 66 GIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLF 99
+F+ + K+ SWTAM+SG+ G+ +A+ LF
Sbjct: 161 AVFDSIRVKNTISWTAMVSGYAKSGRKEEALELF 194
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%)
Query: 47 LGTALVDMCAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ AL+DM AKC + A IF RM +DV SWT++I G HGQ KA+ L++ M
Sbjct: 275 ISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDM 330
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 62.4 bits (150), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR+ K N T V ++ AC +++ + V +I + L L +L T+L+DM AKCG
Sbjct: 232 MRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGS 291
Query: 61 LDEAMGIFER--MEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ +A +F R +++ D W A+I G HG ++++LF++M
Sbjct: 292 IGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKM 335
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 62.4 bits (150), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 57/102 (55%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ + +K + T V LL+AC + R + +I + +L++++ TAL+DM KCG
Sbjct: 249 MQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGC 308
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
++E + +FE K + W +MI G +G +A+ LF+ +
Sbjct: 309 IEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSEL 350
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 62.4 bits (150), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 57/102 (55%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ +G++ + STF +L AC A++++ R + + I + Q D +G+AL+++ A G
Sbjct: 349 MQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGS 408
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
++ M F +D+ SWT+MI H + Q A LF ++
Sbjct: 409 TEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQL 450
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%)
Query: 2 RIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFL 61
R +K + T+ G L C + L + + L L L+DM +KCG L
Sbjct: 140 REANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKL 199
Query: 62 DEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
D+AM +F+R +++D SW ++ISG+ G + + L +M
Sbjct: 200 DQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKM 240
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 62.4 bits (150), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEA 64
G + N +T + +L AC A+ + R + L+ + + TALVDM KC +EA
Sbjct: 259 GTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEA 318
Query: 65 MGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F R+ KDV SW A+ISG ++G ++I F+ M
Sbjct: 319 YAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIM 356
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 7 KTNSSTFVGLLSACPASESIHLVRHVTSFIEEE-KLQLDAVLGTALVDMCAKCGFLDEAM 65
K ++ T L AC ++ + F++++ L D +G++L+ M KCG + EA+
Sbjct: 57 KPDNFTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEAL 116
Query: 66 GIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F+ +E D+ +W++M+SG +G P +A+ F RM
Sbjct: 117 RMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRM 153
Score = 58.5 bits (140), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 50/89 (56%)
Query: 14 VGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFERMED 73
V +L +C + + S++ + + +G +LV++ ++CG L A +F +
Sbjct: 370 VKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIAL 429
Query: 74 KDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
KD WT++I+G+G+HG+ TKA+ FN M
Sbjct: 430 KDTVVWTSLITGYGIHGKGTKALETFNHM 458
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%)
Query: 12 TFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFERM 71
T + L+SAC + L R V F+ D L +L++ AK EA+ +F+ +
Sbjct: 165 TLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMI 224
Query: 72 EDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+KDV SW+ +I+ + +G +A+ +FN M
Sbjct: 225 AEKDVISWSTVIACYVQNGAAAEALLVFNDM 255
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 62.0 bits (149), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M +G + N S+F LS C ++ L + + + + + +G AL+ M KCG
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 459
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
++EA +F+ M KD+ SW MI+G+ HG A+R F M
Sbjct: 460 IEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESM 501
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 56 AKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
A+CG + EA +F++M +D SW AMI+G+ G +A+RLF +M
Sbjct: 354 AQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQM 400
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 62.0 bits (149), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 56/102 (54%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR+ G+ + T L A ++ R + + + D +GT+LVDM AKCG
Sbjct: 609 MRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGS 668
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+D+A +F+R+E ++ +W AM+ G HG+ + ++LF +M
Sbjct: 669 IDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQM 710
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 51/102 (50%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M QG +++ T + C +I+ + V ++ + LD + + ++DM KCG
Sbjct: 508 MHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGD 567
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ A F+ + D +WT MISG +G+ +A +F++M
Sbjct: 568 MSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQM 609
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 62.0 bits (149), Expect = 8e-11, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 55/102 (53%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M + G+ + + LSAC S + + F+ + L D + L+DM AKCG
Sbjct: 533 MGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGN 592
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L AM +F+ M++K++ SW ++I+ G HG+ ++ LF+ M
Sbjct: 593 LKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEM 634
Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 50/94 (53%)
Query: 9 NSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIF 68
N T V +L ++ L R + FI ++ +G A++DM AKCG ++ A IF
Sbjct: 440 NEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIF 499
Query: 69 ERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
ER+ +D+ SW +MI+ P+ AI +F +M
Sbjct: 500 ERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQM 533
Score = 51.6 bits (122), Expect = 9e-08, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 48/102 (47%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR+ + N+ TF +LS C + I L + + + + + +L+ M +KCG
Sbjct: 230 MRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGR 289
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
D+A +F M D +W MISG+ G +++ F M
Sbjct: 290 FDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEM 331
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 48/95 (50%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEA 64
G+ ++ TF LL + E++ + + +I + LD L +AL+D KC + A
Sbjct: 335 GVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMA 394
Query: 65 MGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLF 99
IF + DV +TAMISG+ +G ++ +F
Sbjct: 395 QNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMF 429
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 62.0 bits (149), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 58/101 (57%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR +G K + T +LSAC + + + + + L+ +GTAL+D+ AKCG
Sbjct: 153 MRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGM 212
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNR 101
+ +A+ +FE M+DK +W++M++G+ + +A+ L+ R
Sbjct: 213 IKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRR 253
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 52/98 (53%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEA 64
++ N T ++ AC ++ + + + I + + + ++ VDM AKCG L E+
Sbjct: 258 SLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRES 317
Query: 65 MGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
IF +++K+++ W +ISG H +P + + LF +M
Sbjct: 318 YIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKM 355
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%)
Query: 6 MKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAM 65
+K + T + L AC ++ + V FI+E L L LV M ++CG +D+A
Sbjct: 213 VKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAY 272
Query: 66 GIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F M +++V SWTA+ISG ++G +AI FN M
Sbjct: 273 QVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEM 309
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 56/102 (54%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR++ +K + T L+SA +E++ L + V + + D VL + ++DM AKCG
Sbjct: 366 MRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGS 425
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ +A +F+ +KD+ W +++ + G +A+RLF M
Sbjct: 426 IVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGM 467
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 49/84 (58%)
Query: 19 ACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFERMEDKDVKS 78
AC A + R V ++ + L+ + ++L DM KCG LD+A +F+ + D++ +
Sbjct: 182 ACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVA 241
Query: 79 WTAMISGHGVHGQPTKAIRLFNRM 102
W A++ G+ +G+ +AIRLF+ M
Sbjct: 242 WNALMVGYVQNGKNEEAIRLFSDM 265
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR QG++ T LSA + + + ++LD +LGT+L++ K G
Sbjct: 265 MRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGL 324
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
++ A +F+RM +KDV +W +ISG+ G AI + M
Sbjct: 325 IEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLM 366
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLG--TALVDMCAKC 58
M+ G++ N+ + LSAC S+H+ R + +I LQ +++ T+LVDM AKC
Sbjct: 537 MQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIR-NLQHSSLVSIETSLVDMYAKC 595
Query: 59 GFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
G +++A +F ++ AMIS + ++G +AI L+ +
Sbjct: 596 GDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSL 639
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%)
Query: 6 MKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAM 65
K N T + + AC S + V + E +Q+D L A++ AKCG LD A
Sbjct: 230 FKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYAR 289
Query: 66 GIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F+ M +KD ++ A+ISG+ HG +A+ LF+ M
Sbjct: 290 ALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEM 326
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 52/98 (53%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEA 64
G + N+ T LL + S ++ + + +F + + T+++D AK GFL A
Sbjct: 361 GSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGA 420
Query: 65 MGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F+ +D+ + +WTA+I+ + VHG A LF++M
Sbjct: 421 QRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQM 458
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 39/86 (45%)
Query: 17 LSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFERMEDKDV 76
LS C L R V F+ D +G ++ KC ++ A +F+ M ++DV
Sbjct: 139 LSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDV 198
Query: 77 KSWTAMISGHGVHGQPTKAIRLFNRM 102
SW +MISG+ G +++ M
Sbjct: 199 VSWNSMISGYSQSGSFEDCKKMYKAM 224
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEA 64
G+ + +L C + S+ + + ++ + + V TALVDM KCG +D
Sbjct: 438 GLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNG 497
Query: 65 MGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ +F+ M ++DV SWT +I G G +G+ +A R F++M
Sbjct: 498 VVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKM 535
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 46/95 (48%)
Query: 8 TNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGI 67
N + +L AC I L V I +E L+ D VL ++VDM K G L EA
Sbjct: 105 ANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSS 164
Query: 68 FERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
F+ + SW +ISG+ G +A+ LF+RM
Sbjct: 165 FKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRM 199
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 44/86 (51%)
Query: 17 LSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFERMEDKDV 76
L C ++ + + + ++ + + + ++ M L +A +F+ M ++++
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 77 KSWTAMISGHGVHGQPTKAIRLFNRM 102
+WT M+SG+ G+P KAI L+ RM
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRM 97
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%)
Query: 9 NSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIF 68
+S T G L C ++ L V S + +LD ++G+ LVD+ A G + +A +F
Sbjct: 341 DSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLF 400
Query: 69 ERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
R+ +KD+ +++ +I G G + A LF +
Sbjct: 401 HRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFREL 434
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 8/106 (7%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHV----TSFIEEEKLQLDAVLGTALVDMCA 56
MR + + +TF+ L C + + L + + F E +LQ+ G AL++M +
Sbjct: 500 MRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQI----GNALIEMYS 555
Query: 57 KCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
KCG L+ + +FERM +DV +WT MI +G++G+ KA+ F M
Sbjct: 556 KCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADM 601
Score = 55.5 bits (132), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%)
Query: 6 MKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAM 65
K + T +L AC + L +++ +++ + L++ + L+D+ AKCG + A
Sbjct: 303 FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITAR 362
Query: 66 GIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F ME KD SW ++ISG+ G +A++LF M
Sbjct: 363 DVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMM 399
Score = 55.1 bits (131), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 52/102 (50%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
+R + + TF ++ AC + V I + + D +G ALVDM ++ G
Sbjct: 97 LRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGL 156
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L A +F+ M +D+ SW ++ISG+ HG +A+ +++ +
Sbjct: 157 LTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHEL 198
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 56/94 (59%)
Query: 9 NSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIF 68
N T +L +C + S+ + V ++ +++DAV T+ +DM A+CG + A +F
Sbjct: 311 NQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVF 370
Query: 69 ERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ M +++V SW++MI+ G++G +A+ F++M
Sbjct: 371 DMMPERNVISWSSMINAFGINGLFEEALDCFHKM 404
Score = 52.0 bits (123), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 11/108 (10%)
Query: 1 MRIQGMKTNSSTFVGLLSAC------PASESIHLVRHVTSFIEEEKLQLDAVLGTALVDM 54
MR G+ ++ T + L+ AC + +H V SFI++ L +++DM
Sbjct: 201 MRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDY-----LQASIIDM 255
Query: 55 CAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
KC LD A +FE D++V WT +ISG + +A LF +M
Sbjct: 256 YVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQM 303
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M QG+ +S + +L A ++ S+ + + + + D L AL+DM KCGF
Sbjct: 568 MLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGF 627
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
A IF++M+ K + +W MI G+G HG A+ LF+ M
Sbjct: 628 SKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEM 669
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 53/97 (54%)
Query: 6 MKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAM 65
+K +S + +AC E++ V + + L L+ +G++L+D+ +KCG + A+
Sbjct: 472 LKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMAL 531
Query: 66 GIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F M +++ +W +MIS + + P +I LFN M
Sbjct: 532 KVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLM 568
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%)
Query: 4 QGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDE 63
+K S++F G L AC SE+ R + + + L D + T+L+ M +KCG + E
Sbjct: 266 NSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGE 325
Query: 64 AMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
A +F + DK ++ W AM++ + + A+ LF M
Sbjct: 326 AETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFM 364
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 8 TNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGI 67
T+ TF LL AC A ++ + + + + D + T+LV+M KCGFLD A+ +
Sbjct: 58 TSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQV 117
Query: 68 FERMED-------KDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
F+ +DV W +MI G+ + + + F RM
Sbjct: 118 FDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRM 159
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 58/102 (56%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR + + +S T ++S C + + V + + + +Q + + +AL+ + +KCG
Sbjct: 364 MRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGC 423
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+A +F+ ME+KD+ +W ++ISG +G+ +A+++F M
Sbjct: 424 DPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDM 465
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%)
Query: 6 MKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAM 65
++ N TFVGLLSA S + Q + + ALVDM + CG L+ M
Sbjct: 675 LEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGM 734
Query: 66 GIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F + +W ++IS HG HG KA+ LF +
Sbjct: 735 KVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKEL 771
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%)
Query: 6 MKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAM 65
+ N T+V +L AC + ++ + + + L LD + T+L DM KCG L++A+
Sbjct: 447 IAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDAL 506
Query: 66 GIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F ++ + W +I+ HG HG KA+ LF M
Sbjct: 507 SLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEM 543
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQL-DAVLGTALVDMCAKCG 59
MR+ ++ + T + L S I R V F + L D +G A+V M AK G
Sbjct: 339 MRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLG 398
Query: 60 FLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+D A +F + + DV SW +ISG+ +G ++AI ++N M
Sbjct: 399 LVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIM 441
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%)
Query: 9 NSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIF 68
+S T V LLSAC + + + S+ + L+ + + L+D+ A+ G L + +F
Sbjct: 246 DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVF 305
Query: 69 ERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+RM +D+ SW ++I + ++ QP +AI LF M
Sbjct: 306 DRMYVRDLISWNSIIKAYELNEQPLRAISLFQEM 339
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 53/94 (56%)
Query: 9 NSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIF 68
++ T LLS C ++ S+ L +++ + ++G AL++M ++CG + ++ +F
Sbjct: 488 DAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVF 547
Query: 69 ERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+M +KDV SW ++IS + HG+ A+ + M
Sbjct: 548 NQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTM 581
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 54/97 (55%)
Query: 6 MKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAM 65
+ + T + +L A + ++ L F++ +KL + TA++DM +KCG +++A
Sbjct: 270 LDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAK 329
Query: 66 GIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
IF+ M +K V SW AMI G+ ++G A+ LF M
Sbjct: 330 RIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTM 366
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%)
Query: 9 NSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIF 68
++ TF L +C S ++ + S I D + T +VDM AK G + A F
Sbjct: 77 DNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAF 136
Query: 69 ERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ M + SWTA+ISG+ G+ A +LF++M
Sbjct: 137 DEMPHRSEVSWTALISGYIRCGELDLASKLFDQM 170
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 7 KTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMG 66
K +S T+ +L+AC + E + + V + + + + D + TA+VD+ AKCG + EAM
Sbjct: 248 KPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAME 306
Query: 67 IFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F R+ + V SWT M+SG+ A+ +F M
Sbjct: 307 VFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEM 342
Score = 57.0 bits (136), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M +G++T+ + LLS + ++L + V + + L LD +G++L + +KCG
Sbjct: 444 MLQEGLRTDEFSVCSLLSVL---DCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGS 500
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L+E+ +F+ + KD W +MISG +G +AI LF+ M
Sbjct: 501 LEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEM 542
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR G++ N+ T ++SAC + V +++ + LD+ + AL+ M +K G
Sbjct: 342 MRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGD 401
Query: 61 LDEAMGIFERMEDKDVKSW-TAMISGHGVHGQPTKAIRLFNRM 102
+D + +FE ++D ++ MI+ +P KAIRLF RM
Sbjct: 402 IDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRM 444
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 55/102 (53%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M + G +S +L A S+ L V ++I + L + +G++L+ M +K G
Sbjct: 643 MVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGS 702
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+D+ F ++ D+ +WTA+I+ + HG+ +A++++N M
Sbjct: 703 IDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLM 744
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEA 64
G + ST +L+ C + S+ + + + + LG+ALV+M +KCG L A
Sbjct: 546 GTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLA 605
Query: 65 MGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+++R+ + D S +++ISG+ HG LF M
Sbjct: 606 RQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDM 643
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLD--AVLGTALVDMCAKC 58
M G++ + T G +SAC + ++ V+G+AL+DM +KC
Sbjct: 272 MEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKC 331
Query: 59 GFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
G ++EA+ +F M +K+V ++++MI G HG+ +A+ LF+ M
Sbjct: 332 GNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYM 375
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR + + S TF LL AC + ++L R + + +G ++DM KC
Sbjct: 140 MRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCES 199
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+D A +F+ M ++DV SWT +I+ + G A LF +
Sbjct: 200 IDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESL 241
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 11 STFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFER 70
+T + + C ESI R V +E + D + T L+ A+ G ++ A +FE
Sbjct: 188 NTMIDMYVKC---ESIDCARKVF----DEMPERDVISWTELIAAYARVGNMECAAELFES 240
Query: 71 MEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ KD+ +WTAM++G + +P +A+ F+RM
Sbjct: 241 LPTKDMVAWTAMVTGFAQNAKPQEALEYFDRM 272
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 58/102 (56%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR + + TF + AC A + + + + + + ++ + ++ +ALVDM KC
Sbjct: 200 MRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSS 259
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ +F+++ ++V +WT++ISG+G HG+ ++ ++ F +M
Sbjct: 260 FSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKM 301
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M G+ NS+T + LL AC + + + + L+ + +AL+DM KCGF
Sbjct: 279 MLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGF 338
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ EAM +F + K ++ +MI + HG KA+ LF++M
Sbjct: 339 ISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQM 380
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%)
Query: 12 TFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFERM 71
TF LLS SI + S + + L + + AL+ M +KCG +D A +F M
Sbjct: 476 TFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFM 535
Query: 72 EDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
E+++V SWT+MI+G HG + + FN+M
Sbjct: 536 ENRNVISWTSMITGFAKHGFAIRVLETFNQM 566
Score = 58.9 bits (141), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 60/106 (56%), Gaps = 6/106 (5%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKC-- 58
M + G +++ T + SAC E++ L + + S+ L D + +LVDM AKC
Sbjct: 260 MVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSA 317
Query: 59 -GFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQ-PTKAIRLFNRM 102
G +D+ +F+RMED V SWTA+I+G+ + T+AI LF+ M
Sbjct: 318 DGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEM 363
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Query: 9 NSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIF 68
+S TF LL +C + L + V + + E ++ D+VL +L+ + +K G +A +F
Sbjct: 61 DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVF 120
Query: 69 ERME---DKDVKSWTAMISGHGVHGQPTKAIRLF 99
E M +DV SW+AM++ +G +G+ AI++F
Sbjct: 121 ETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVF 154
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 55/99 (55%)
Query: 4 QGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDE 63
+G+ + T ++SAC + + + V + + LD +G+ALVDM +KCG L+
Sbjct: 1026 EGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLER 1085
Query: 64 AMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
A+ +F + K++ W ++I G HG +A+++F +M
Sbjct: 1086 ALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKM 1124
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEA 64
G + N ST V LL+AC S + R V + + L V+ TAL+DM KC + A
Sbjct: 245 GFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLA 304
Query: 65 MGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
IF+ + ++ +W MI H +HG+P + LF M
Sbjct: 305 RRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAM 342
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%)
Query: 4 QGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDE 63
Q ++ N+ T +L AC S+ L + + F + L + + +ALVDM +K G +
Sbjct: 515 QNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKY 574
Query: 64 AMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
A +F + ++++ ++T MI G+G HG +AI LF M
Sbjct: 575 AEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSM 613
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ QG K + T LLSA + + + +F+ + +Q + + + L+DM +K G
Sbjct: 410 MQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSGL 468
Query: 61 LDEAMGIFER--MEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ + +FE ++D +W +MISG+ +G K +F +M
Sbjct: 469 IRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKM 512
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%)
Query: 12 TFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFERM 71
T++ SA A + + L R F+ + +L V+ +L+ M ++CG + ++ G+F M
Sbjct: 320 TYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSM 379
Query: 72 EDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
++DV SW MIS +G + + L M
Sbjct: 380 RERDVVSWNTMISAFVQNGLDDEGLMLVYEM 410
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIE--------EEKLQLDAVLGTALV 52
M+ G+K N + V LL AC + I + F++ + K+ + +L T+L+
Sbjct: 199 MQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLI 258
Query: 53 DMCAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLF 99
DM AKCG L A +F+ M ++ + SW ++I+G+ +G +A+ +F
Sbjct: 259 DMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMF 305
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEA 64
G+ + TF+ ++ A L + + +++ + DA + ALV+M AK G + A
Sbjct: 312 GIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESA 371
Query: 65 MGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
FE +E KD +WT +I G HG +A+ +F RM
Sbjct: 372 KKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRM 409
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 15/108 (13%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKL-----QLDAVLGTALVDMC 55
M +G++ + T V L AC H+ E E + + ++ A +DM
Sbjct: 201 METEGIRRSEVTVVAALGACS---------HLGDVKEGENIFHGYSNDNVIVSNAAIDMY 251
Query: 56 AKCGFLDEAMGIFERME-DKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+KCGF+D+A +FE+ K V +W MI+G VHG+ +A+ +F+++
Sbjct: 252 SKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKL 299
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 36 IEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKA 95
I L D++L T L+D +K G L A +F+ M +DV SW A+I+G + ++A
Sbjct: 135 INRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEA 194
Query: 96 IRLFNRM 102
+ L+ RM
Sbjct: 195 MELYKRM 201
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 9 NSSTFVGLLSACPASESIHLVRHVTSFIEEEKL-QLDAVLGTALVDMCAKCGFLDEAMGI 67
N +T +LSAC + + V + E ++D + AL+DM KCG ++ AM +
Sbjct: 187 NDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEV 246
Query: 68 FERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
F+ ++ +D+ SW MI+G HG T+A+ LF+ M
Sbjct: 247 FKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEM 281
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 55/102 (53%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
+R +G ++N TF +L+AC + + + V I + + + + +AL+DM AKC
Sbjct: 218 LRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCRE 277
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
++ A + E ME DV SW +MI G G +A+ +F RM
Sbjct: 278 MESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRM 319
Score = 55.8 bits (133), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 40/57 (70%)
Query: 46 VLGTALVDMCAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
++ ALVDM AK G +D A+ +FE M +KDV SWTA+++G+ +G +A++LF M
Sbjct: 365 LVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNM 421
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 47/102 (46%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR+ G+ + +LSA + + V + + +LV M KCG
Sbjct: 421 MRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGS 480
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L++A IF ME +D+ +WT +I G+ +G A R F+ M
Sbjct: 481 LEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSM 522
Score = 45.1 bits (105), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 1 MRIQGMKTNSSTFVGLLSACPA------SESIHLVRHVTSFIEEEKLQLDAVLGTALVDM 54
M+ G+K N T +L C + E IH T F LD + L+ M
Sbjct: 116 MQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGF------DLDVNVVNGLLAM 169
Query: 55 CAKCGFLDEAMGIFERME-DKDVKSWTAMISGHGVHGQPTKAIRLF 99
A+C + EA +FE ME +K+ +WT+M++G+ +G KAI F
Sbjct: 170 YAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECF 215
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 59.3 bits (142), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 58/104 (55%), Gaps = 5/104 (4%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTS--FIEEEKLQLDAVLGTALVDMCAKC 58
MR+Q ++ N + V L+ +C + VR V + ++ + L L+ +GT+L+D+ +KC
Sbjct: 208 MRMQ-VRPNELSLVALIKSC--ANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKC 264
Query: 59 GFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
G L A +F+ M +DV + AMI G VHG + I L+ +
Sbjct: 265 GCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSL 308
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%)
Query: 12 TFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFERM 71
TF L AC + S+ L V + + +L+DM AKCG + A +F M
Sbjct: 451 TFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEM 510
Query: 72 EDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
E DV SW A+ISG+ HG +A+R+ + M
Sbjct: 511 ETIDVASWNALISGYSTHGLGRQALRILDIM 541
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR + N T +L+ C + L + + + LD + AL+D+ AKC
Sbjct: 339 MREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEK 398
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLF 99
+D A+ +F + K+ SW +I G+ G+ KA +F
Sbjct: 399 MDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMF 437
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 58.9 bits (141), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%)
Query: 4 QGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDE 63
QG+ N TF L AC ++ + F + ++ +G +LVDM +KCG ++E
Sbjct: 101 QGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINE 160
Query: 64 AMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
A +F R+ D+ + SW AMI+G G +KA+ F M
Sbjct: 161 AEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMM 199
Score = 58.9 bits (141), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%)
Query: 43 LDAVLGTALVDMCAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L+ + ++VDM KCG +DEA F M+ KDV SWT +I+G+G HG K++R+F M
Sbjct: 346 LETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEM 405
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 7 KTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQL--DAVLGTALVDMCAKCGFLDEA 64
+ + T LL AC ++ I+ + + F+ A + +LVD+ KCG+L A
Sbjct: 207 RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSA 266
Query: 65 MGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
F+++++K + SW+++I G+ G+ +A+ LF R+
Sbjct: 267 RKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRL 304
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 58.9 bits (141), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 4 QGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEE---KLQLDAVLGTALVDMCAKCGF 60
+ + + T +LSAC S+ L +F+ + + +D ++ +L++M KCG
Sbjct: 245 RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGS 304
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L A +F+ M+ +D+ SW AMI G HG+ +A+ F+RM
Sbjct: 305 LRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRM 346
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 58.9 bits (141), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 52/102 (50%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
+R + + + TF +L AC + + + + + D VL +L+ AKCG
Sbjct: 360 LRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGS 419
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
LD M +F+ M+ +DV SW +M+ + +HGQ + +F +M
Sbjct: 420 LDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM 461
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 14/98 (14%)
Query: 13 FVGLLSACPASESI--------HLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEA 64
+ L AC ++ H++ H + + + +L L++M AKCG + A
Sbjct: 62 YAALFQACAEQRNLLDGINLHHHMLSHPYCYSQ------NVILANFLINMYAKCGNILYA 115
Query: 65 MGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F+ M +++V SWTA+I+G+ G + LF+ M
Sbjct: 116 RQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM 153
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 58.9 bits (141), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 55/98 (56%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEA 64
++ +S T V +LSAC S+ + + +E++ + ++ A +DM KCG + A
Sbjct: 205 AVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAA 264
Query: 65 MGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+FE M+ ++V SW+ MI G+ ++G +A+ LF M
Sbjct: 265 RVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTM 302
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%)
Query: 4 QGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDE 63
+GM N T+ LL+A + + + +L AVL +L+DM +KCG L
Sbjct: 248 EGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSY 307
Query: 64 AMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
A +F+ M ++ SW AM+ G+ HG + + LF M
Sbjct: 308 ARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLM 346
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR G K N TF +L++C + + L + + I + +G++L+DM AK G
Sbjct: 145 MRSDG-KPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQ 203
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ EA IFE + ++DV S TA+I+G+ G +A+ +F+R+
Sbjct: 204 IKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRL 245
Score = 45.4 bits (106), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%)
Query: 13 FVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFERME 72
+ LL+AC ++ + V + + + + L T L+ KC L++A + + M
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 73 DKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+K+V SWTAMIS + G ++A+ +F M
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEM 144
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 1 MRIQGMKTNSSTFVGLLSAC----PASESIHLVRHVTSFIEEEKLQLD---AVLGTALVD 53
M + G++ N TF+ LLS C SE++ + H + KL LD ++GTA++
Sbjct: 62 MTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYAC----KLGLDRNHVMVGTAIIG 117
Query: 54 MCAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
M +K G +A +F+ MEDK+ +W MI G+ GQ A ++F++M
Sbjct: 118 MYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKM 166
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 52/102 (50%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+I G+K + + L+AC ++ V ++ + + + + +L+D+ +CG
Sbjct: 197 MQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGC 256
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
++ A +F ME + V SW ++I G +G +++ F +M
Sbjct: 257 VEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKM 298
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%)
Query: 7 KTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMG 66
+ N TF G+L+AC + L + V ++ + ++LVDM KCG ++ A
Sbjct: 316 RPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKH 375
Query: 67 IFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFN 100
+ + D+ SWT++I G +GQP +A++ F+
Sbjct: 376 VVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFD 409
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%)
Query: 4 QGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDE 63
+ K +ST+ L+ C + ++ + V I V+ L+ M AKCG L +
Sbjct: 79 RAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVD 138
Query: 64 AMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
A +F+ M ++D+ SW M++G+ G +A +LF+ M
Sbjct: 139 ARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM 177
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%)
Query: 41 LQLDAVLGTALVDMCAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFN 100
L D VL ++L+DM KCG +DEA IF+++ +KDV SWT+MI + + + LF+
Sbjct: 249 LDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFS 308
Query: 101 RM 102
+
Sbjct: 309 EL 310
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%)
Query: 38 EEKLQLDAVLGTALVDMCAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIR 97
+E D +V+ A+ G L+EA +F+ M +KD SWTAM++G+ QP +A+
Sbjct: 144 DEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALV 203
Query: 98 LFNRM 102
L++ M
Sbjct: 204 LYSLM 208
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 57.8 bits (138), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 12 TFVGLLSACPASE--SIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFE 69
TF LLSAC + IH + S+ Q D + TAL++M AK L +A FE
Sbjct: 247 TFSSLLSACRIEQGKQIHAILFKVSY------QFDIPVATALLNMYAKSNHLSDARECFE 300
Query: 70 RMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
M ++V SW AMI G +G+ +A+RLF +M
Sbjct: 301 SMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQM 333
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%)
Query: 12 TFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFERM 71
+F+GL+ C S ++ + + ++ L+ T+LV KCG + EA +FE +
Sbjct: 144 SFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAV 203
Query: 72 EDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
D+D+ W A++S + ++G +A L M
Sbjct: 204 LDRDLVLWNALVSSYVLNGMIDEAFGLLKLM 234
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 53/102 (51%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M ++ ++ + TF +LS+C +I ++ V + + ++ + +L+ ++ G
Sbjct: 333 MLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGN 392
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L EA+ F + + D+ SWT++I HG +++++F M
Sbjct: 393 LSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESM 434
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 57.8 bits (138), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 35 FIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHG 90
+I E++ L LG AL+DM +KCG + AM +FE +E+K + W AMI G +HG
Sbjct: 375 YIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHG 430
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 1 MRIQG-MKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCG 59
MR +G +K NS+T + AC + + L+ D LG +L+ M +K G
Sbjct: 265 MRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLG 324
Query: 60 FLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
++ EA +F M++KD SW ++I+G Q ++A LF +M
Sbjct: 325 YMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM 367
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%)
Query: 9 NSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIF 68
NS TF +LSA + + + + + + D + +LV M KCG ++A IF
Sbjct: 437 NSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIF 496
Query: 69 ERMEDKDVKSWTAMISGHGVHGQPTKAIRLFN 100
+ + ++ S+ MISG+ +G KA++LF+
Sbjct: 497 SCISEPNIVSYNTMISGYSYNGFGKKALKLFS 528
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Query: 1 MRIQGMKTNSSTFVGLLSACP-ASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCG 59
MR++G+ +N T V +LSAC + + + + ++I + D + +L+ M AKCG
Sbjct: 437 MRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCG 496
Query: 60 FLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L + +F ++++++ +W AM++ + HG + ++L ++M
Sbjct: 497 DLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKM 539
Score = 52.0 bits (123), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEA 64
G N TF L+AC + R + + L + ++G ALV M K G + E+
Sbjct: 340 GKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSES 399
Query: 65 MGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ +M +DV +W A+I G+ P KA+ F M
Sbjct: 400 RRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTM 437
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVR-HVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDE 63
G+K +S L++AC S S+ V F+ + L D + TA++ + G +
Sbjct: 36 GIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSC 95
Query: 64 AMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ +FE M D++V SWT+++ G+ G+P + I ++ M
Sbjct: 96 SRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGM 134
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 53/102 (51%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR +G+ N ++ ++S+C + L R + + + L+ + +L+ M G
Sbjct: 134 MRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGN 193
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+D A IF++M ++D SW ++ + + +G ++ R+F+ M
Sbjct: 194 VDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLM 235
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Query: 1 MRIQGMKTNSSTFVGLLSACP-ASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCG 59
MR++G+ +N T V +LSAC + + + + ++I + D + +L+ M AKCG
Sbjct: 454 MRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCG 513
Query: 60 FLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L + +F ++++++ +W AM++ + HG + ++L ++M
Sbjct: 514 DLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKM 556
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEA 64
G N TF L+AC + R + + L + ++G ALV M K G + E+
Sbjct: 357 GKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSES 416
Query: 65 MGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ +M +DV +W A+I G+ P KA+ F M
Sbjct: 417 RRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTM 454
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVR-HVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDE 63
G+K +S L++AC S S+ V F+ + L D + TA++ + G +
Sbjct: 53 GIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSC 112
Query: 64 AMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ +FE M D++V SWT+++ G+ G+P + I ++ M
Sbjct: 113 SRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGM 151
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 53/102 (51%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR +G+ N ++ ++S+C + L R + + + L+ + +L+ M G
Sbjct: 151 MRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGN 210
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+D A IF++M ++D SW ++ + + +G ++ R+F+ M
Sbjct: 211 VDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLM 252
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 6 MKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAM 65
M+ + +L A +S+ +V+ + I + L LD V+ LVD+ KC + A
Sbjct: 483 MEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYAT 541
Query: 66 GIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+FE ++ KDV SWT+MIS ++G ++A+ LF RM
Sbjct: 542 RVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRM 578
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 30 RHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVH 89
R + ++ + L+ + A+VDM A CG L A +F+R+E K + +T+MI+ +G+H
Sbjct: 607 REIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMH 666
Query: 90 GQPTKAIRLFNRM 102
G A+ LF++M
Sbjct: 667 GCGKAAVELFDKM 679
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 2 RIQGMKTNS--STFVGLLSACPASESIHLVRHVTS--FIEEEKLQLDAVLGTALVDMCAK 57
R+ + NS F +L C ++ R + S F +LD + G LV M K
Sbjct: 70 RLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGK-LVFMYGK 128
Query: 58 CGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
CG LD+A +F+ M D+ +W MI + +G+P A+ L+ M
Sbjct: 129 CGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNM 173
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHV-TSFIEEEKLQLDAVLGTALVDMCAKCG 59
M + G NS T V L+AC L + + S ++ + + AL+ M +CG
Sbjct: 275 MHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCG 334
Query: 60 FLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ +A I +M + DV +W ++I G+ + +A+ F+ M
Sbjct: 335 KMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDM 377
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%)
Query: 2 RIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFL 61
R +G+ + STF +L+AC + + + + + + V+ ++L+DM KCG +
Sbjct: 257 RGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSV 316
Query: 62 DEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
EA +F M K+ SW+A++ G+ +G+ KAI +F M
Sbjct: 317 REARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM 357
Score = 45.1 bits (105), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 46/90 (51%)
Query: 13 FVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFERME 72
F +L AC ++ L + + + ++ +AL+D+ K G +D A ++ +M
Sbjct: 365 FGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMS 424
Query: 73 DKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+++ +W AM+S +G+ +A+ FN M
Sbjct: 425 IRNMITWNAMLSALAQNGRGEEAVSFFNDM 454
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%)
Query: 4 QGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDE 63
+G+ + +F L AC S + I E L+ D +GTALV+M K L
Sbjct: 94 KGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVS 153
Query: 64 AMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
A +F++M KDV +W M+SG +G + A+ LF+ M
Sbjct: 154 ARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDM 192
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 53/102 (51%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+++ + N+ TFV ++ A ++ + V S + + +G +LVDM AKCG
Sbjct: 595 MKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGM 654
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
++ + F + +K + SW M+S + HG + A+ LF M
Sbjct: 655 IESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSM 696
Score = 52.0 bits (123), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 44 DAVLGTALVDMCAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
D + T+L+ M +KCG L+ A +F +ED+DV SW+AMI+ + GQ +AI LF M
Sbjct: 334 DVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDM 392
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MRI +K N+ T +L C + L + + + + ++ + TA++ M AKCG
Sbjct: 393 MRIH-IKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGR 451
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
A+ FER+ KD ++ A+ G+ G KA ++ M
Sbjct: 452 FSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNM 493
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M++ G+ +S T VG+L C V I + + + AL++M KC
Sbjct: 493 MKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDA 552
Query: 61 LDEAMGIFERME-DKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L A+ +F++ +K SW M++G+ +HGQ +A+ F +M
Sbjct: 553 LAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQM 595
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR G+ + T ++ + L + + + + + V TALVD +K G
Sbjct: 316 MRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGR 375
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+D A +F+++ K++ SW A++ G+ HG+ T A++LF +M
Sbjct: 376 VDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKM 417
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%)
Query: 6 MKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAM 65
K ST+ L+ AC +SI V+ V F+ + + + ++ M KCG + +A
Sbjct: 119 FKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDAR 178
Query: 66 GIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F+ + ++++ S+ ++ISG G +A LF M
Sbjct: 179 RLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMM 215
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQ--LDAVLGTALVDMCAKC 58
M+ G++ + T V + ++C + L + + + K + D ++ +L+DM KC
Sbjct: 209 MKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKC 268
Query: 59 GFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
G +D A IFE M ++V SW++MI G+ +G +A+ F +M
Sbjct: 269 GRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQM 312
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR + N T+ L+ AC ++H + + + ++L + L T+L+DM KCG
Sbjct: 233 MRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGD 292
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ A +F D+ WTAMI G+ +G +A+ LF +M
Sbjct: 293 ISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKM 334
Score = 56.6 bits (135), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 10/108 (9%)
Query: 1 MRIQGMKTNSSTFVGLLSACPA------SESIHLVRHVTSFIEEEKLQLDAVLGTALVDM 54
M + + N T L SAC + S+H F+ + + GTAL+D
Sbjct: 434 MNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHV----GTALLDF 489
Query: 55 CAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
AKCG A IF+ +E+K+ +W+AMI G+G G ++ LF M
Sbjct: 490 YAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEM 537
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 6 MKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAM 65
+K N T +LS C E++ L R V + + D + ALV M AKC +A
Sbjct: 339 IKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAK 397
Query: 66 GIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+FE +KD+ +W ++ISG +G +A+ LF+RM
Sbjct: 398 YVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRM 434
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 56.6 bits (135), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 55/99 (55%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR + ++ + TFV LL A + S+ L + + + + L LD G+AL+D+ + C
Sbjct: 445 MRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYC 504
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLF 99
L ++ +F+ M+ KD+ W +M +G+ + +A+ LF
Sbjct: 505 LKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLF 543
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 51/96 (53%)
Query: 7 KTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMG 66
+ + TF +++A S+ L + + + L+ + + AL+DM AKCG ++A
Sbjct: 552 RPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHK 611
Query: 67 IFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
F+ +DV W ++IS + HG+ KA+++ +M
Sbjct: 612 AFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKM 647
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%)
Query: 16 LLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFERMEDKD 75
+LSAC + + + + I L++DA L L+D KCG + A +F M +K+
Sbjct: 255 VLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKN 314
Query: 76 VKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ SWT ++SG+ + +A+ LF M
Sbjct: 315 IISWTTLLSGYKQNALHKEAMELFTSM 341
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%)
Query: 28 LVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFERMEDKDVKSWTAMISGHG 87
+V + SF+ + D +GT L+D K G +D A +F+ + +K +WT MISG
Sbjct: 166 MVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCV 225
Query: 88 VHGQPTKAIRLFNRM 102
G+ +++LF ++
Sbjct: 226 KMGRSYVSLQLFYQL 240
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M G +S V LL AC ++ + V + L LG A+ DM KC
Sbjct: 226 MGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSI 285
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
LD A +F M +DV SW+++I G+G+ G + +LF+ M
Sbjct: 286 LDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEM 327
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
Query: 9 NSSTFVGLLSACPASES--IHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMG 66
N +TFV +LS+C + I L + + ++ +++ L LGTAL+DM K G L+ A+
Sbjct: 220 NEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALT 279
Query: 67 IFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
IF+++ DK V +W A+IS +G+P +A+ +F M
Sbjct: 280 IFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMM 315
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 55.8 bits (133), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFI---EEEKLQLDAVLGTALVDMCAKCGFL 61
G++ + T+ ++ AC + + L + V +++ E+ D +LV + KCG
Sbjct: 281 GIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD----NSLVSLYYKCGKF 336
Query: 62 DEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
DEA IFE+M KD+ SW A++SG+ G +A +F M
Sbjct: 337 DEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEM 377
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 40 KLQLDAVL--GTALVDMCAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIR 97
K+ D+ L G AL+ M AKCG ++EA +F M D SW A+I+ G HG +A+
Sbjct: 445 KIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVD 504
Query: 98 LFNRM 102
++ M
Sbjct: 505 VYEEM 509
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 55.8 bits (133), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 54/102 (52%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M++ G+K N T +L AC ++ R F L + +G+AL+DM AKCG
Sbjct: 379 MQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGR 438
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
++ + +F M K++ W ++++G +HG+ + + +F +
Sbjct: 439 INLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESL 480
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 55.8 bits (133), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 11/100 (11%)
Query: 9 NSSTFVGLLSAC------PASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLD 62
N +F L+AC P IH + ++ + + V+G L+DM KCGF+D
Sbjct: 155 NEFSFTAALAACARLHLSPLGACIH-----SKLVKLGLEKGNVVVGNCLIDMYGKCGFMD 209
Query: 63 EAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+A+ +F+ ME+KD SW A+++ +G+ + F++M
Sbjct: 210 DAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM 249
Score = 55.1 bits (131), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 40 KLQLDA--VLGTALVDMCAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIR 97
KL LD+ V+ +AL+DM +KCG L A +F M K++ W MISG+ +G +AI+
Sbjct: 348 KLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIK 407
Query: 98 LFNRM 102
LFN++
Sbjct: 408 LFNQL 412
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ G+ + T V +LS+C + + V +E + + A + M A+CG
Sbjct: 248 MKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGN 307
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L +A +F+ M K + SWTAMI +G+HG + LF+ M
Sbjct: 308 LAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDM 349
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 50/102 (49%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ G+ +S T +GL+ C E + L R + + L + + + + M KCG
Sbjct: 147 MKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGS 206
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
++ +F+ M K + +W A+ISG+ +G + L+ +M
Sbjct: 207 VEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQM 248
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEA 64
G++ ++ T + ++ C + + R V I + LD L +L+ M +KCG L +
Sbjct: 197 GVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSS 256
Query: 65 MGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
IFE++ K+ SWTAMIS + KA+R F+ M
Sbjct: 257 ERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEM 294
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 6 MKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAM 65
++ N TF+ ++ AC + S+ + V + L+ D TAL+DM AKCG L+ A
Sbjct: 501 LEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAE 559
Query: 66 GIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F M + + SW++MI+ +G+HG+ AI FN+M
Sbjct: 560 TVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQM 596
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M Q +K ++ T +SAC + + L + + + + D + +L+DM +K G
Sbjct: 396 MVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYSKSGS 454
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+D A +F +++ + V +W +M+ G +G +AI LF+ M
Sbjct: 455 VDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYM 496
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ +G+ N++T LL +H + V F + L DA + TALVDM K G
Sbjct: 387 MQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGD 446
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L A+ IF +++K + SW M+ G+ + G+ + I F+ M
Sbjct: 447 LQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVM 488
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 48/85 (56%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+I G+K ++S+ LL A + L + + +I +L D + T L+DM K G+
Sbjct: 216 MQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGY 275
Query: 61 LDEAMGIFERMEDKDVKSWTAMISG 85
L A +F+ M+ K++ +W +++SG
Sbjct: 276 LPYARMVFDMMDAKNIVAWNSLVSG 300
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 50/102 (49%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ G K ST V LL C E R + ++ L+ + + +L+ M ++ G
Sbjct: 80 MQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGK 139
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L+ + +F M+D+++ SW +++S + G AI L + M
Sbjct: 140 LELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEM 181
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQL-DAVLGTALVDMCAKCG 59
M ++ + TFV +LS C + L + I + D + L+DM KCG
Sbjct: 536 MLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCG 595
Query: 60 FLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLF 99
+ M +FE +K++ +WTA+IS G+HG +A+ F
Sbjct: 596 SIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKF 635
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M G N T+V +L + + R + + + + VLG AL+D AKCG
Sbjct: 307 MPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGN 366
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L+++ F+ + DK++ W A++SG+ P + LF +M
Sbjct: 367 LEDSRLCFDYIRDKNIVCWNALLSGYANKDGPI-CLSLFLQM 407
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 55.1 bits (131), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%)
Query: 9 NSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIF 68
+S TF +L AC R V + + ++ + + TAL+DM +K G L +++ +F
Sbjct: 83 SSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVF 142
Query: 69 ERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
E +E+KD+ SW A++SG +G+ +A+ +F M
Sbjct: 143 ESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAM 176
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 14/100 (14%)
Query: 3 IQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLD 62
+ G NS ++G + IH V F+ + KL L+DM KCG +
Sbjct: 288 LAGCSDNSDLWIG--------KQIHCVALRNGFVSDSKL------CNGLMDMYGKCGQIV 333
Query: 63 EAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+A IF + K V SWT+MI + V+G KA+ +F M
Sbjct: 334 QARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREM 373
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 55.1 bits (131), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 52/98 (53%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEA 64
G+K + TF +L AC S+ + + + +E D + ALV M AKCG + +A
Sbjct: 190 GVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKA 249
Query: 65 MGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F+ + KD SW +M++G+ HG +A+ +F M
Sbjct: 250 RNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLM 287
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M I+G K + T LLSA ++ L + + + + D + AL+ M ++CG
Sbjct: 400 MNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIP-DVPVHNALITMYSRCGE 458
Query: 61 LDEAMGIFERME-DKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ E+ IF+ M+ ++V +W AMI G+ HG ++A+ LF M
Sbjct: 459 IMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSM 501
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR +G+ + T +LSA S I R + + D V+ AL+DM K +
Sbjct: 253 MREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKW 312
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L+EA IFE M+++D+ +W +++ H G + LF RM
Sbjct: 313 LEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERM 354
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKL----QLDAVLGTALVDMCA 56
M G++ + T +L C S+ R + ++ L + + +L+DM
Sbjct: 354 MLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYV 413
Query: 57 KCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
KCG L +A +F+ M KD SW MI+G+GV A+ +F+ M
Sbjct: 414 KCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCM 459
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M QG +++T V LL C + R V + L+LD+ + AL+ +KC
Sbjct: 142 MLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAE 201
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L A +F M+DK SW MI + G +AI +F M
Sbjct: 202 LGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNM 243
Score = 48.5 bits (114), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 51/102 (50%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M G+ ++ T LL+ C ++L + + + + + + TAL+DM AKCG
Sbjct: 440 MLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGN 499
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+A +F+ ++ +W +MISG+ + G +A+ + M
Sbjct: 500 EVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEM 541
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 54.3 bits (129), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 54/102 (52%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
+R+ G K + +L +C + V S++ L+LD + +AL+DM +KCG
Sbjct: 299 LRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGL 358
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L AM +F + +K++ S+ ++I G G+HG + A F +
Sbjct: 359 LKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEI 400
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 41 LQLDAVLGTALVDMCAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFN 100
L D + G+A+V +K G + EA +F + D D+ W MI G+G G K I LFN
Sbjct: 137 LGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFN 196
Query: 101 RM 102
M
Sbjct: 197 LM 198
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 57/102 (55%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR + NS T++ L+AC S+ I + + + + + ++ + + +AL+DM +KCG
Sbjct: 247 MRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGS 306
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+++A IFE + D S T ++ G +G +AI+ F RM
Sbjct: 307 IEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRM 348
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 50/98 (51%)
Query: 5 GMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEA 64
G++ +++ +L S+ L + + S + + K + + L++M +KCG L ++
Sbjct: 352 GVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDS 411
Query: 65 MGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F RM ++ SW +MI+ HG A++L+ M
Sbjct: 412 QTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEM 449
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%)
Query: 32 VTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQ 91
V S+I E +++D +L T+L+D+ K G +A +F + KD S++AMI G G++G
Sbjct: 353 VESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGM 412
Query: 92 PTKAIRLFNRM 102
T+A LF M
Sbjct: 413 ATEANSLFTAM 423
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%)
Query: 9 NSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIF 68
N ++F +LS+C S+ R + + D+ + TAL DM KCG +D A F
Sbjct: 518 NETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFF 577
Query: 69 ERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ + K+ W MI G+G +G+ +A+ L+ +M
Sbjct: 578 DAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKM 611
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR + + T ++SAC L R + +++ +D + +L M G
Sbjct: 288 MRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGS 347
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
EA +F RME KD+ SWT MISG+ + P KAI + M
Sbjct: 348 WREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMM 389
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%)
Query: 3 IQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLD 62
+ G+K + TF +L C + + V + +LD + AL+ M KCG +
Sbjct: 189 VGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVK 248
Query: 63 EAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
A +F+RM +D+ SW AMISG+ +G + + LF M
Sbjct: 249 SARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAM 288
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 43 LDAVLGTALVDMCAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
LD L AL+DM +CG ++ A F + KDV SW +++G+ GQ + + LF+RM
Sbjct: 531 LDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRM 589
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR G K LLS I R V + L+ ++ + ++L++M +KCG
Sbjct: 402 MRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGS 461
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNR 101
+ EA IF + D+ S TAMI+G+ HG+ +AI LF +
Sbjct: 462 IKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEK 502
Score = 48.5 bits (114), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%)
Query: 8 TNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGI 67
+++ TF L AC + + + + + + +L M +CG + + + +
Sbjct: 207 SDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCL 266
Query: 68 FERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
FE M ++DV SWT++I + GQ KA+ F +M
Sbjct: 267 FENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKM 301
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 6/107 (5%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEE-----EKLQLDAVLGTALVDMC 55
MR G + T + LLSAC + + + +I E + + + AL+DM
Sbjct: 266 MRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMY 325
Query: 56 AKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
AKCG +D A+ +F ++D+D+ +W +I G +H +I +F M
Sbjct: 326 AKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEM 371
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 44 DAVLGTALVDMCAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
D V ++ C KC +D A +F+R +KDV +W AMISG+ G P +A+ +F M
Sbjct: 208 DQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEM 266
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 15 GLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFERMEDK 74
+LS C S+H + T + D +G++LVDM AKCG + A +F+ M +
Sbjct: 127 AILSRCDIGRSVHCLSMKTGY------DADVFVGSSLVDMYAKCGEIVYARKMFDEMPQR 180
Query: 75 DVKSWTAMISGHGVHGQPTKAIRLF 99
+V +W+ M+ G+ G+ +A+ LF
Sbjct: 181 NVVTWSGMMYGYAQMGENEEALWLF 205
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%)
Query: 3 IQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLD 62
+ + N +F ++S C S + L R + + + +G++LV + +KCG +
Sbjct: 210 FENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPE 269
Query: 63 EAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
A +F + K++ W AM+ + H K I LF RM
Sbjct: 270 GAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRM 309
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 41 LQLDAVLGTALVDMCAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFN 100
Q A +G ALV++ AKCG + EA F + +KD+ SW M+ GVHG +A++L++
Sbjct: 368 FQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYD 427
Query: 101 RM 102
M
Sbjct: 428 NM 429
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 43 LDAVLGTALVDMCAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L V +++D C K G ++A+ +F +K++ +WT MI+G+G +G +A+R F M
Sbjct: 269 LTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEM 328
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 4 QGMKTNSSTFVGLLSACPASESIHLV---RHVTSFIEEEKLQLDAV-LGTALVDMCAKCG 59
QG + +T V +L P S S+ ++ + + S E L D + +G ALVD K G
Sbjct: 228 QGFDPDEATVVTVL---PISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSG 284
Query: 60 FLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L+ A IF +M+ ++V SW +ISG V+G+ I LF+ M
Sbjct: 285 DLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAM 327
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 9 NSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIF 68
N TF + AC A + +++ + +E L+ + V+ ++LVDM KC ++ A +F
Sbjct: 130 NEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVF 189
Query: 69 ERM--EDKDVKSWTAMISGHGVHGQPTKAIRLF 99
+ M ++V SWT+MI+ + + + +AI LF
Sbjct: 190 DSMIGYGRNVVSWTSMITAYAQNARGHEAIELF 222
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%)
Query: 7 KTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMG 66
+ N ++SAC + + + + + + V+ T+L+DM AKCG L A
Sbjct: 233 RANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEK 292
Query: 67 IFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
IF R+ V S+T+MI HG A++LF+ M
Sbjct: 293 IFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEM 328
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Query: 4 QGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDE 63
+ +K N T V +L AC + + R + + E + + A ++M +KCG +D
Sbjct: 209 KSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDV 268
Query: 64 AMGIFERM-EDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
A +FE + +++ SW +MI HG+ +A+ LF +M
Sbjct: 269 AKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQM 308
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%)
Query: 9 NSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIF 68
+S+T +L A S S+ R + ++I + + + ++ +LV M A CG L++A F
Sbjct: 430 DSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCF 489
Query: 69 ERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ KDV SW ++I + VHG ++ LF+ M
Sbjct: 490 NHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEM 523
Score = 52.0 bits (123), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 4 QGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDE 63
G++ + T + LL A E R + + VL TAL+DM +CG L
Sbjct: 328 NGLQPDVITSINLLPASAILEG----RTIHGYAMRRGFLPHMVLETALIDMYGECGQLKS 383
Query: 64 AMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
A IF+RM +K+V SW ++I+ + +G+ A+ LF +
Sbjct: 384 AEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQEL 422
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%)
Query: 4 QGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDE 63
+G++ T +L++ A+ + + V SFI + L+ + + +L++M AKCG
Sbjct: 140 EGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMM 199
Query: 64 AMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
A +F+RM +D+ SW AMI+ H GQ A+ F +M
Sbjct: 200 AKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQM 238
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 49 TALVDMCAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
TAL+D K G +++A IF ++D+DV +WTAMI G+ HG +AI LF M
Sbjct: 351 TALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSM 404
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 12/105 (11%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESI------HLVRHVTSFIEEEKLQLDAVLGTALVDM 54
MR G+ N TFVGL++A +E I H + T F+ E + G + + +
Sbjct: 363 MRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSV------GNSFITL 416
Query: 55 CAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLF 99
AK L++A FE + +++ SW AMISG +G +A+++F
Sbjct: 417 YAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMF 461
Score = 52.0 bits (123), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 9 NSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDA--VLGTALVDMCAKCGFLDEAMG 66
N TF +L+A +E I + + KL L++ V+ +AL+DM AK G +DE+
Sbjct: 471 NEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEK 530
Query: 67 IFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F M K+ WT++IS + HG + LF++M
Sbjct: 531 VFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKM 566
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ G+ ++ T+ LS C SE L + S + + L+ D V+G + + M ++ G
Sbjct: 165 MKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGS 224
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHG 90
A +F+ M KD+ SW +++SG G
Sbjct: 225 FRGARRVFDEMSFKDMISWNSLLSGLSQEG 254
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 52.0 bits (123), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 51/91 (56%)
Query: 12 TFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFERM 71
T ++ AC S ++ + + + + + + D V+ T++ DM KC L+ A +F++
Sbjct: 265 TVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQT 324
Query: 72 EDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
KD+KSWT+ +SG+ + G +A LF+ M
Sbjct: 325 RSKDLKSWTSAMSGYAMSGLTREARELFDLM 355
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 49/93 (52%)
Query: 7 KTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMG 66
K + T LL+ C +++L + + F+ + ++D V+ A+VDM +KC D A+
Sbjct: 493 KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIE 552
Query: 67 IFERMEDKDVKSWTAMISGHGVHGQPTKAIRLF 99
+F+ +D+ W ++I G +G+ + LF
Sbjct: 553 VFKEAATRDLILWNSIIRGCCRNGRSKEVFELF 585
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR + ++ T V +L+ C + + + FI + ++ AL+DM KCG
Sbjct: 386 MRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGT 445
Query: 61 LDEAMGIFERM-EDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L A F +M E +D SW A+++G G+ +A+ F M
Sbjct: 446 LQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGM 488
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
+R +K N T+V +LSAC + + + I + Q + ++ +AL++M +K G
Sbjct: 322 LRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGE 381
Query: 61 LDEAMGIFER--MEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L A +F+ + +D+ SW +MI+ + HG +AI ++N+M
Sbjct: 382 LIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQM 425
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%)
Query: 38 EEKLQLDAVLGTALVDMCAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIR 97
+E + + V ++V + G +DEAM +FERM +DV SWTAM+ G +G+ +A R
Sbjct: 164 DEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARR 223
Query: 98 LFNRM 102
LF+ M
Sbjct: 224 LFDCM 228
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 44 DAVLGTALVDMCAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
D V TA+VD AK G +DEA +F+ M ++++ SW AMI+G+ + + +A +LF M
Sbjct: 201 DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVM 259
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Query: 4 QGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDE 63
+G K + T+ L++A + H + + S +E+ L+ D +L A+++ ++ G LD+
Sbjct: 348 EGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQ 407
Query: 64 AMGIFERMEDKDVK----SWTAMISGHGVHGQPTKAIRLFNRM 102
AM IFE+M++ K ++ +I G+G G+ ++ RL + M
Sbjct: 408 AMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMM 450
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%)
Query: 4 QGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDE 63
+G+ N++TF LL AC +S+ + V I L+ + L T LV M CG + +
Sbjct: 105 RGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKD 164
Query: 64 AMGIFERMEDKDVKSWTAMISGHGVHGQ 91
A +F+ +V SW A++ G + G+
Sbjct: 165 AQKVFDESTSSNVYSWNALLRGTVISGK 192
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 45/83 (54%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M+ +G + + T +L C +I + + + + + L T+L+ M +KCG
Sbjct: 409 MQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGV 468
Query: 61 LDEAMGIFERMEDKDVKSWTAMI 83
+ + +F+R+E ++VK+WTAMI
Sbjct: 469 PEYPIRLFDRLEQRNVKAWTAMI 491
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M G++ + + G +SA ++ +H+ + + A + +LVDM +KCG
Sbjct: 519 MYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGS 578
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L++A +FE + DV SW ++SG +G + A+ F M
Sbjct: 579 LEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEM 620
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR G++ N+ T+ +LS C A S+ + + S + + +G ALVDM KC
Sbjct: 316 MRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSA 375
Query: 61 LD-EAMGIFERMEDKDVKSWTAMISGHGVHG 90
+ EA +F M +V SWT +I G HG
Sbjct: 376 SEVEASRVFGAMVSPNVVSWTTLILGLVDHG 406
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 50/102 (49%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M G N TF ++ +C I V + + + ++V+G++L D+ +KCG
Sbjct: 115 MMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQ 174
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
EA +F +++ D SWT MIS + +A++ ++ M
Sbjct: 175 FKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEM 216
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR G + + T GL++AC + + L++ + F + + A V +K G
Sbjct: 131 MRKLGFEVDGFTLSGLIAAC--CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGL 188
Query: 61 LDEAMGIFERMED-KDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L EA+ +F M++ +D SW +MI +G H + KA+ L+ M
Sbjct: 189 LREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEM 231
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAV-LGTALVDMCAKCG 59
M+ G + + +FV + SAC S + + + + + + + AL+ + K G
Sbjct: 336 MQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSG 395
Query: 60 FLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L +A +F+RM + + S+ MI G+ HG T+A+ L+ RM
Sbjct: 396 NLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRM 438
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%)
Query: 2 RIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFL 61
R G + + +TF+ +L +C + L + + I + + TAL+D+ +K G L
Sbjct: 227 RRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRL 286
Query: 62 DEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+++ +F + D +WTAM++ + HG AI+ F M
Sbjct: 287 EDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELM 327
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 46/99 (46%)
Query: 4 QGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDE 63
+G + FV L +C +S+ + V + K + D L ++ M +C + +
Sbjct: 230 KGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITD 289
Query: 64 AMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
A +F+ M DKD+ SW M+ + +G A+ LF M
Sbjct: 290 AKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEM 328
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 17 LSACPASESIHLVRHVTS--FIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFERMEDK 74
LSAC ++ + + S + +L +D L +L++M K G ++A +F+ K
Sbjct: 174 LSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRK 233
Query: 75 DVKSWTAMISGHGVHGQPTKAIRLFNRM 102
DV ++T+MI G+ ++GQ +++ LF +M
Sbjct: 234 DVTTYTSMIFGYALNGQAQESLELFKKM 261
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%)
Query: 11 STFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFER 70
+T +L AC ++ + + + I + K + D L +L+DM KCG ++ + +F+
Sbjct: 338 ATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDV 397
Query: 71 MEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
M KD+ SW M++ + ++G + I LF M
Sbjct: 398 MLTKDLASWNIMLNCYAINGNIEEVINLFEWM 429
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 52/97 (53%)
Query: 6 MKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAM 65
++T+ +LSAC + L R + + + ++ +G+ALVDM KCG ++++
Sbjct: 306 VETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSE 365
Query: 66 GIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
F+ M +K++ + ++I G+ GQ A+ LF M
Sbjct: 366 QAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEM 402
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%)
Query: 9 NSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIF 68
N STF L++C A ++ + + + L+ DA +G +LV M + G +++A+ +F
Sbjct: 325 NQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVF 384
Query: 69 ERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
++ K + SW ++I G HG+ A +F +M
Sbjct: 385 IKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQM 418
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 44 DAVLGTALVDMCAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
D V +++ C +CG ++ A+ +F+ M ++ V SWTAM++G G+ +A RLF +M
Sbjct: 96 DVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQM 154
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAK--C 58
M+ ++T+ T+ GLLSAC E + + + ++ L+ AL+ M +
Sbjct: 296 MQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPT 355
Query: 59 GFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
G +++A+ +FE ++ KD+ SW ++I+G G A++ F+ +
Sbjct: 356 GTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYL 399
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
+R +K + F LL +C ++ L + + + + + + ++L+ M +KCG
Sbjct: 399 LRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGI 458
Query: 61 LDEAMGIFERMEDK-DVKSWTAMISGHGVHGQPTKAIRLFNRM 102
++ A F+++ K +W AMI G+ HG ++ LF++M
Sbjct: 459 IESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQM 501
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 52/102 (50%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M +G++ + T+ ++ AC A R V IE + + + AL+ M + G
Sbjct: 175 MMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGK 234
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+D A +F+RM ++D SW A+I+ + + +A +L +RM
Sbjct: 235 VDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRM 276
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 52/102 (50%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M +G++ + T+ ++ AC A R V IE + + + AL+ M + G
Sbjct: 175 MMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGK 234
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+D A +F+RM ++D SW A+I+ + + +A +L +RM
Sbjct: 235 VDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRM 276
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 46 VLGTALVDMCAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
++G ALV+M AK G +++A F M +D+ +W MISG HG +A+ F+RM
Sbjct: 374 MVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRM 430
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 48.5 bits (114), Expect = 8e-07, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR +GM N T+ L+ A + + + + + E L D + T ++D K G
Sbjct: 351 MRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGN 410
Query: 61 LDEAMGIFERMEDKDVK----SWTAMISGHGVHGQPTKAIRLFNRM 102
+D+A G+F M + ++ S+ ++ISG G+ T+AI+LF M
Sbjct: 411 VDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDM 456
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 48.5 bits (114), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 50/102 (49%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M + +K NSSTF L+ C E + + + S I + + V+ T+++ M + CG
Sbjct: 190 MAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGD 249
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L+ A IF+ + ++D +W MI G + + + F M
Sbjct: 250 LESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNM 291
Score = 46.2 bits (108), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 51/102 (50%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M + G+ T+ +L+ C S L + + + I D L AL+DM CG
Sbjct: 291 MLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGD 350
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ EA +F R+ + ++ SW ++ISG +G +A+ ++ R+
Sbjct: 351 MREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRL 392
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 11 STFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFER 70
STF L+S C +S+ I R V ++E + D L T L+ CAK G +D +F +
Sbjct: 468 STFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQ 527
Query: 71 MEDKDVK----SWTAMISGHGVHGQPTKAIRLF 99
M + V+ ++ A+I G GQ KA +
Sbjct: 528 MSNSGVEANLHTFGALIDGCARAGQVAKAFGAY 560
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 43/97 (44%)
Query: 6 MKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAM 65
+K NS T L C R + + + D G+ L+D+ KCG D A
Sbjct: 364 IKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMAR 423
Query: 66 GIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+F+ + + DV S MI + +G +A+ LF RM
Sbjct: 424 LVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERM 460
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 44 DAVLGTALVDMCAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ +G+ALVDM K G EA + +R+E+KDV TA+I G+ G+ T+A++ F M
Sbjct: 200 NVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSM 258
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%)
Query: 44 DAVLGTALVDMCAKCGFLDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
D LG +L+ M AKC D+A+ IF M + DV SW ++IS + + +A+ L++RM
Sbjct: 555 DISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRM 613
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 4 QGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDE 63
Q ++ + TF +LS+ A H V S + + LD + T+L++M K G +D
Sbjct: 330 QSVRPDKFTFSSVLSSMNAVMLDHGA-DVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDL 388
Query: 64 AMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
AMG+F + + KD+ W +I G + + +++ +FN++
Sbjct: 389 AMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQL 427
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 52/102 (50%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
M +G++ ++ T+ +L AC + + R V IE + + AL+ M +
Sbjct: 135 MVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRN 194
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ A +F+RM ++D SW A+I+ + G ++A LF++M
Sbjct: 195 MGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKM 236
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 44/91 (48%)
Query: 11 STFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIFER 70
S + L C +E + + V I LD L++M + CG +EA +FE+
Sbjct: 255 SRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEK 314
Query: 71 MEDKDVKSWTAMISGHGVHGQPTKAIRLFNR 101
M +K++++W +I +G AI +F+R
Sbjct: 315 MSEKNLETWCIIIRCFAKNGFGEDAIDMFSR 345
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 6 MKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAM 65
+K ++ T V + SA + S+ + ++ + + L A++DM AKCG ++ A+
Sbjct: 434 VKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETAL 493
Query: 66 GIFERMED---KDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
IF + ++ + W A+I G HG A+ L++ +
Sbjct: 494 NIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDL 533
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%)
Query: 1 MRIQGMKTNSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGF 60
MR G+ N T ++SAC I R + S + KL+ + T L+ M C
Sbjct: 164 MRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLC 223
Query: 61 LDEAMGIFERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
L +A +F+ M ++++ +W M++G+ G +A LF+++
Sbjct: 224 LKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQI 265
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%)
Query: 9 NSSTFVGLLSACPASESIHLVRHVTSFIEEEKLQLDAVLGTALVDMCAKCGFLDEAMGIF 68
+S V +L AC + + + + +D L TA VDM +KCG ++ A IF
Sbjct: 392 DSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIF 451
Query: 69 ERMEDKDVKSWTAMISGHGVHGQPTKAIRLFNRM 102
+ ++D + AMI+G HG K+ + F M
Sbjct: 452 DSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDM 485