Miyakogusa Predicted Gene
- Lj6g3v2275060.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v2275060.1 Non Chatacterized Hit- tr|K4ATP6|K4ATP6_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,47.66,8e-17,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.61038.1
(110 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-14
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-13
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-11
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-11
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-11
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-11
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-11
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-11
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 61 2e-10
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 61 2e-10
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-10
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 60 4e-10
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-10
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-09
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-09
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-09
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-09
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-09
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 56 4e-09
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-09
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-09
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-09
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 6e-09
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-09
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-09
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 55 1e-08
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-08
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-08
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-08
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-08
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-08
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 54 2e-08
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-08
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-08
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-08
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-08
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 53 5e-08
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-08
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-08
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 52 1e-07
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-07
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-07
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-07
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 51 1e-07
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-07
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-07
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-07
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-07
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 3e-07
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-07
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 50 3e-07
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-07
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-07
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-07
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-07
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-07
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 8e-07
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 1e-06
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 1e-06
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 48 1e-06
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 48 1e-06
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 1e-06
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 48 1e-06
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 2e-06
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 48 2e-06
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 2e-06
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 2e-06
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 2e-06
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 3e-06
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 3e-06
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 47 3e-06
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 47 3e-06
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 4e-06
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 4e-06
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 46 5e-06
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 46 5e-06
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 46 6e-06
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 46 6e-06
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 46 6e-06
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 46 6e-06
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 45 7e-06
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 45 8e-06
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 45 8e-06
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 75.1 bits (183), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L EAY+LI++LPI D+TAWR LL+ACRVYG+ L E V + + HP D++L++ T
Sbjct: 483 LEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGT 542
Query: 62 YAAAG 66
+A AG
Sbjct: 543 HAVAG 547
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 68.9 bits (167), Expect = 7e-13, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 6/102 (5%)
Query: 1 MLHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISS 60
+L +AY LIKS+ +K D+T WRTLL ACRV+GDV+L E V + + A D +L+ +
Sbjct: 370 LLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLN 429
Query: 61 TYAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAG 102
TY+ G+ +++ + +++ +H K G S ++ G
Sbjct: 430 TYSTVGK------WEKVTELRSLMKEKRIHTKPGCSAIELQG 465
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 64.3 bits (155), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 14/108 (12%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L EA LI ++PIK + W+TLLS CRV+GD++L + V ++ I A +P + +++S+
Sbjct: 466 LKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNL 525
Query: 62 YAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAGLSWVVID 109
Y AG ++ +E+ GL KEAG+SWV I+
Sbjct: 526 YGQAGYWNEQGNARELGNIK------GLK--------KEAGMSWVEIE 559
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 63.5 bits (153), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 53/87 (60%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L EAY LIK++P+K DA W TLL AC +G+V++AE + + + +P + +++S+
Sbjct: 369 LQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNI 428
Query: 62 YAAAGRISDLIPMQEIKQTNVVVENYG 88
YAA + ++ M+++ + + + G
Sbjct: 429 YAANEKWDGVLRMRKLMKKETMTKAAG 455
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 63.5 bits (153), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 6/95 (6%)
Query: 4 EAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISSTYA 63
EA+K +K++P+ +A W +LLSACR +GDVKLAE + I + + +L+S+ YA
Sbjct: 391 EAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYA 450
Query: 64 AAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTV 98
GR Q++++ +++ L + G ST+
Sbjct: 451 EEGR------WQDVEKVRTLMKKNRLRKSTGQSTI 479
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 63.2 bits (152), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L +AY I +PI A WRTLL AC +G+++LAE VK +N + + D +L+S+
Sbjct: 423 LQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNA 482
Query: 62 YAAAGRISDL------IPMQEIKQT 80
YA AG+ D+ + +Q IK+T
Sbjct: 483 YATAGKWKDVASIRKSMIVQRIKKT 507
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 62.0 bits (149), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 4 EAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISSTYA 63
+AY+ IKS+P++ + WRTLL AC V+GD LAE+ + I + H D +L+S+ YA
Sbjct: 378 KAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYA 437
Query: 64 AAGRISDLIPMQEIKQ 79
+ R SD+ Q+I++
Sbjct: 438 SEQRWSDV---QKIRK 450
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 62.0 bits (149), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 4 EAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISSTYA 63
+AY+ IKS+P++ + WRTLL AC V+GD LAE+ + I + H D +L+S+ YA
Sbjct: 245 KAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYA 304
Query: 64 AAGRISDLIPMQEIKQ 79
+ R SD+ Q+I++
Sbjct: 305 SEQRWSDV---QKIRK 317
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 60.8 bits (146), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Query: 1 MLHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISS 60
+L EA +LI+ +P++ + W +LL+ACRV G+V++A Y + I + +L+S+
Sbjct: 622 LLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSN 681
Query: 61 TYAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAG 102
YA+AGR +D+ + + ++ GL + G S+++ G
Sbjct: 682 VYASAGRWNDM------AKVRLSMKEKGLRKPPGTSSIQIRG 717
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 60.8 bits (146), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Query: 1 MLHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISS 60
+L EA +LI+ +P++ + W +LL+ACRV G+V++A Y + I + +L+S+
Sbjct: 622 LLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSN 681
Query: 61 TYAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAG 102
YA+AGR +D+ + + ++ GL + G S+++ G
Sbjct: 682 VYASAGRWNDM------AKVRLSMKEKGLRKPPGTSSIQIRG 717
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 60.1 bits (144), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 20/113 (17%)
Query: 1 MLHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDS---LL 57
+L +A+ L+K++P + DA W TLL A RV+G+ +LAE D I+A P +S +L
Sbjct: 561 LLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAAD---KIFAMEPENSGMYVL 617
Query: 58 ISSTYAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAGLSWVVIDN 110
+S+ YA++GR D + + V + + G+ K G SW+ I N
Sbjct: 618 LSNLYASSGRWGD------VGKLRVRMRDKGVK--------KVPGYSWIEIQN 656
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 59.7 bits (143), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 20/113 (17%)
Query: 1 MLHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDS---LL 57
M+ AY+ IK +PI+ + W L +ACR++G +L + N++ P DS +L
Sbjct: 464 MVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAE---NLFKLDPKDSGNHVL 520
Query: 58 ISSTYAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAGLSWVVIDN 110
+S+T+AAAGR + + N V E E KG K AG SW+ + N
Sbjct: 521 LSNTFAAAGRWA---------EANTVRE-----ELKGVGIKKGAGYSWITVKN 559
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 58.5 bits (140), Expect = 8e-10, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 58/98 (59%), Gaps = 6/98 (6%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L EAY LI ++P + +T W LL+AC + +V+L E + + + + + +L+++
Sbjct: 577 LDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANI 636
Query: 62 YAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVK 99
YAA GR D M++++ ++EN GL +K G ST++
Sbjct: 637 YAALGRWKD---MEKVRS---MMENVGLRKKPGHSTIE 668
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 14/109 (12%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L EAY LIK +P + D+ W LL++CR+ +V LAE + + ++ +P +L+S+
Sbjct: 541 LQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNI 600
Query: 62 YAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAGLSWVVIDN 110
YAA G + E+ +E+ GL K G SW+ + N
Sbjct: 601 YAAKGMWT------EVDSIRNKMESLGLK--------KNPGCSWIQVKN 635
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 57.8 bits (138), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 44/66 (66%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L EA+ ++S+ I+ +A WRTLL AC++YG+V+L +Y + + ++ D +L+S+
Sbjct: 432 LEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNI 491
Query: 62 YAAAGR 67
YA+ G+
Sbjct: 492 YASTGQ 497
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 14/105 (13%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L EA + I +P DA W TLLSACR G++++ ++ + + + HP L+SS
Sbjct: 524 LEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSI 583
Query: 62 YAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAGLSWV 106
YA+ G+ + ++ G+ EK + KE G SW+
Sbjct: 584 YASKGKWDSVAQLRR-----------GMREK---NVKKEPGQSWI 614
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 14/109 (12%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L +A + I +P+K DA W TLL A +VY V + E + + + +P + +++S+
Sbjct: 342 LTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNI 401
Query: 62 YAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAGLSWVVIDN 110
Y AGR D ++ V + + G KEAG+SW+ D+
Sbjct: 402 YGDAGRFDDAARLK------VAMRDTGFK--------KEAGVSWIETDD 436
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 56.6 bits (135), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 60/110 (54%), Gaps = 16/110 (14%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L EA KLI+S+P + A + TLL ACRV+ +V+LAE+ + + + + + + +++
Sbjct: 437 LEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANI 496
Query: 62 YAAAGRISDLIPMQE-IKQTNVVVENYGLHEKKGGSTVKEAGLSWVVIDN 110
YA+ R D+ +++ +K++NV VK G SW+ I N
Sbjct: 497 YASKNRWEDVARVRKRMKESNV---------------VKVPGYSWIEIRN 531
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 56.2 bits (134), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 16/109 (14%)
Query: 1 MLHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISS 60
+L +A++ I ++P + D WRT L ACRV+ + +L + I + P + +S+
Sbjct: 626 LLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSN 685
Query: 61 TYAAAGRISDLIPM-QEIKQTNVVVENYGLHEKKGGSTVKEAGLSWVVI 108
YA AG+ + M +++K+ N+ VKE G SW+ +
Sbjct: 686 IYACAGKWEESTEMRRKMKERNL---------------VKEGGCSWIEV 719
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 55.8 bits (133), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 14/105 (13%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L+ A +LI+ +P++ W LS CR++G V+L EY + I + + H L+S+
Sbjct: 631 LNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNL 690
Query: 62 YAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAGLSWV 106
YA AGR D+ ++ L KG K G SWV
Sbjct: 691 YANAGRWKDVTRIRS------------LMRHKG--VKKRPGCSWV 721
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 55.8 bits (133), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 57/104 (54%), Gaps = 6/104 (5%)
Query: 1 MLHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISS 60
+L EA ++I+S+P+ + W +L+SACR++G+++L ++ I + H +L+S+
Sbjct: 496 LLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSN 555
Query: 61 TYAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAGLS 104
YA R D ++ V+E + ++KG S + + G S
Sbjct: 556 IYAREQRWED------VRNIRRVMEEKNVFKEKGLSRIDQNGKS 593
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 55.8 bits (133), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 14/107 (13%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L EA +LI+ + +K + W LLSACR++ DV E I N+ + +L+S+
Sbjct: 480 LKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNI 539
Query: 62 YAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAGLSWVVI 108
YA+AGR S++ ++ + KK G +K+ G SWVVI
Sbjct: 540 YASAGRWSNVSKLR-------------VKMKKNG-IMKKPGSSWVVI 572
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 55.8 bits (133), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 49/84 (58%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L EAY+LIKS+P + A+AW +LL C ++G+ ++AE V + + +L+S+
Sbjct: 458 LKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNI 517
Query: 62 YAAAGRISDLIPMQEIKQTNVVVE 85
YAA R +D+ +++ N + +
Sbjct: 518 YAALDRWTDVAHLRDKMNENGITK 541
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 55.5 bits (132), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 16/110 (14%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L EAY+L S PI + WR++LS+CR++G+ LA ++ + H +L+S+
Sbjct: 520 LEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNV 579
Query: 62 YAAAGRISDLIPMQE-IKQTNVVVENYGLHEKKGGSTVKEAGLSWVVIDN 110
Y AG+ +++ +++ ++Q NV K G SW+V+ N
Sbjct: 580 YVEAGKYEEVLDVRDAMRQQNV---------------KKTPGCSWIVLKN 614
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 55.1 bits (131), Expect = 9e-09, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 43/64 (67%)
Query: 1 MLHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISS 60
+L EAY+LIKS+P A+ W +LL++CRVY +++LAE + + + + + +L+S+
Sbjct: 415 LLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSN 474
Query: 61 TYAA 64
YAA
Sbjct: 475 IYAA 478
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L A K IKS+ ++ DA+ W LLSACRV+G+V L + + + + H +L+S+
Sbjct: 604 LETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNM 663
Query: 62 YAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVK 99
YA+AG+ + + + + GL + G S+++
Sbjct: 664 YASAGK------WEGVDEIRSIAHGKGLRKTPGWSSME 695
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 38/69 (55%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L EA K+ +PI+ A WR LL AC VY D +LAE V + + +H D +L+S+
Sbjct: 413 LEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNI 472
Query: 62 YAAAGRISD 70
+ GR D
Sbjct: 473 FCGTGRFLD 481
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 14/109 (12%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
+EA ++I S+ ++ DA W +LL ACR + + +AE+ + I + +L+S+
Sbjct: 485 FNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNM 544
Query: 62 YAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAGLSWVVIDN 110
YA+ GR +D+ ++++ +T +V K G SW ++N
Sbjct: 545 YASQGRWADVAELRKLMKTRLV--------------RKSPGCSWTEVEN 579
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 1 MLHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISS 60
+L EA + I+S+PI+ + WRT LS CRV +++L + + + + +P D LLIS+
Sbjct: 386 LLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISN 445
Query: 61 TYAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAG 102
Y + G++ D ++ +T + GL + G S V+ G
Sbjct: 446 LY-SQGQMWD-----DVARTRTEIAIKGLKQTPGFSIVELKG 481
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 59/101 (58%), Gaps = 6/101 (5%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L +AY LI+ + +K D+ W +LL+ACR++ +V+LAE + + +++ +L+S
Sbjct: 440 LQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHI 499
Query: 62 YAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAG 102
YA AGR D +++ ++++N GL + G S ++ G
Sbjct: 500 YADAGRWKD------VERVRMIMKNRGLVKPPGFSLLELNG 534
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 20/107 (18%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDS---LLI 58
L +A +I+S+PIK D W+TLLSAC ++ K AE + V I P DS +L+
Sbjct: 346 LDQAEAIIRSMPIKTDIVIWKTLLSACNIH---KNAEMAQRVFKEILQIDPNDSACYVLL 402
Query: 59 SSTYAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAGLSW 105
++ +A+A R D+ E++++ + + KEAG+SW
Sbjct: 403 ANVHASAKRWRDV---SEVRKS-----------MRDKNVKKEAGISW 435
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L +AY+ I+++PI DAT W LL CR++ DVKLAE V + + + + +L+++
Sbjct: 652 LIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANI 711
Query: 62 YAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAG 102
YA A + +++K+ + GL + G S ++ G
Sbjct: 712 YAEAEK------WEQVKRLRKRIGQRGLRKNPGCSWIEIKG 746
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L +A++ I +PIK + WRTLL AC ++G+V+L E V+ I + H D + +S+
Sbjct: 328 LKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNI 387
Query: 62 YAAAG 66
YA+ G
Sbjct: 388 YASKG 392
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 53.1 bits (126), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 1 MLHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISS 60
+L EAY+ IK +P++ D W LL AC V+ D+ L + V DV+ + +L+S+
Sbjct: 364 LLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSN 423
Query: 61 TYAAAGR 67
YAAAG+
Sbjct: 424 IYAAAGK 430
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 38/66 (57%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
EAYK+I+++P K A W LL ACR YG+++LAE + + +P + +L+
Sbjct: 335 FEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYVLLGKI 394
Query: 62 YAAAGR 67
Y + GR
Sbjct: 395 YMSVGR 400
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 59/107 (55%), Gaps = 14/107 (13%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L EA +I+ +P++ D+ W +LL+AC+V+ ++ L +YV + + + ++ +L+S+
Sbjct: 545 LEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNM 604
Query: 62 YAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAGLSWVVI 108
YA G+ D++ +++ +K G T K+ G SW+ I
Sbjct: 605 YAELGKWEDVMNVRK-------------SMRKEGVT-KQPGCSWIKI 637
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 52.8 bits (125), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 48/82 (58%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L EA ++IK +P+K D W LLSA R +G+V++AE + I +H +++S+
Sbjct: 594 LEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNV 653
Query: 62 YAAAGRISDLIPMQEIKQTNVV 83
YA AGR D+ ++E +T V
Sbjct: 654 YADAGRWEDVALVREEMRTRDV 675
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 52.4 bits (124), Expect = 6e-08, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 20/113 (17%)
Query: 1 MLHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDS---LL 57
++ +A LI+S+ ++ A+ +RTLL+ACRV GD E K V + P DS +L
Sbjct: 770 LVKQAENLIESMSMEASASMYRTLLAACRVQGD---TETGKRVATKLLELEPLDSSAYVL 826
Query: 58 ISSTYAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAGLSWVVIDN 110
+S+ YAAA + E+K ++ KG K+ G SW+ + N
Sbjct: 827 LSNMYAAASK------WDEMKLARTMM--------KGHKVKKDPGFSWIEVKN 865
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 51.6 bits (122), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 9/100 (9%)
Query: 4 EAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISSTYA 63
EAY+LI+S+PI+ D WR+LLS+ R Y + +L E I N+ A D +L+S+ Y+
Sbjct: 320 EAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEI---AIQNLSKAKSGDYVLLSNIYS 376
Query: 64 AAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAGL 103
+ + ++E+ + G+ + KG S ++ G+
Sbjct: 377 STKKWESAQKVREL------MSKEGIRKAKGKSWLEFGGM 410
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 62/101 (61%), Gaps = 12/101 (11%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDS---LLI 58
L EAY+ I+++PI+ D TLLSAC+++G+++L E + ++ + DS +L+
Sbjct: 408 LEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGE---KIAKRLFESENPDSGTYVLL 464
Query: 59 SSTYAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVK 99
S+ YA++G+ + EI+++ + + G+ ++ G ST++
Sbjct: 465 SNLYASSGKWKE---STEIRES---MRDSGIEKEPGCSTIE 499
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 46/87 (52%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L +A KL ++ P K + W LLS+CRV+GDV LA V + + + +L+S+T
Sbjct: 672 LEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNT 731
Query: 62 YAAAGRISDLIPMQEIKQTNVVVENYG 88
Y++ + D +Q + N V + G
Sbjct: 732 YSSLRQWDDSAALQGLMNKNRVHKTPG 758
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 53/99 (53%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L EA+ +I S+ + D W++LL A +Y DV++AE I + + D +L+S+
Sbjct: 359 LREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNV 418
Query: 62 YAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKE 100
YAA GR D+ +++ ++ V + GL + T+ E
Sbjct: 419 YAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHE 457
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 24/115 (20%)
Query: 1 MLHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDS---LL 57
+L A + I+ +PIK DA WRTLLSAC V+ ++++ E+ +++ P DS +L
Sbjct: 844 LLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAA---HHLLELEPEDSATYVL 900
Query: 58 ISSTYAAAGR--ISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAGLSWVVIDN 110
+S+ YA + + DL Q++K+ V KE G SW+ + N
Sbjct: 901 LSNLYAVSKKWDARDLT-RQKMKEKGV---------------KKEPGQSWIEVKN 939
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 14/107 (13%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L +AY++IK +P++ T W LLSAC+ + V+L EY + +I ++ + +S+
Sbjct: 475 LDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNL 534
Query: 62 YAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAGLSWVVI 108
YAAA R+ D + + V ++ GL+ K+ G SWV +
Sbjct: 535 YAAA-RLWD-----RVAEVRVRMKEKGLN--------KDVGCSWVEV 567
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 16/110 (14%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
+ EA K+I+++P K A+ W +LL++CR++G+V + E + + +P + +++S+
Sbjct: 490 IKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNI 549
Query: 62 YAAAGRISDLIPMQE-IKQTNVVVENYGLHEKKGGSTVKEAGLSWVVIDN 110
YA A ++ ++E +KQ V KEAG SWV + +
Sbjct: 550 YADAKMWDNVDKIREMMKQRGV---------------KKEAGCSWVQVKD 584
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 14/109 (12%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L+ A + I+ +PI+ A W+ LL+ACR++ + +L Y + + + P +++ +
Sbjct: 414 LNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNI 473
Query: 62 YAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAGLSWVVIDN 110
YA+ GR +D +++ + K KE SWV I+N
Sbjct: 474 YASGGRWNDAARVRK--------------KMKESGVKKEPACSWVEIEN 508
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
+ +A + I+++PIK DA+ W ++L ACR GD++ AE V I + P S+L S+
Sbjct: 662 ISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNA 721
Query: 62 YAA 64
YAA
Sbjct: 722 YAA 724
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L EAY+ +KS+P DA W TLL ACR++ +V+LAE + ++ ++ +LIS+
Sbjct: 696 LTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNA 755
Query: 62 YAAA 65
+A A
Sbjct: 756 HANA 759
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 41/72 (56%)
Query: 1 MLHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISS 60
+L EA LIK++P++ D W +LLSACR G+V++A+ + + +L+S+
Sbjct: 410 LLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSN 469
Query: 61 TYAAAGRISDLI 72
YA+ G + +
Sbjct: 470 AYASYGLFEEAV 481
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 14/106 (13%)
Query: 4 EAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISSTYA 63
+A +I+SLP K A W LLS CRV+G+++L D + + H +L+S+ +A
Sbjct: 572 DAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHA 631
Query: 64 AAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAGLSWVVID 109
A G+ +E+ + ++ + G+ KE SW+ ++
Sbjct: 632 ATGQ------WEEVARVRKLMRDRGVK--------KEVACSWIEME 663
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 45/75 (60%)
Query: 1 MLHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISS 60
+L EA + I ++PIK D W+ LL ACR+ G+V++ + V +++ ++ + +S+
Sbjct: 426 LLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSN 485
Query: 61 TYAAAGRISDLIPMQ 75
YA+ G S++ M+
Sbjct: 486 MYASQGNWSEVSEMR 500
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 37/67 (55%)
Query: 1 MLHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISS 60
+L EA I SLP+K D W+ LL AC +GD ++ EY + + + +LI++
Sbjct: 509 LLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIAN 568
Query: 61 TYAAAGR 67
Y++ G+
Sbjct: 569 IYSSRGK 575
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 49.3 bits (116), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 6/84 (7%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L EA +LI+++ K DA W LL+AC+++ +VK+AE + + N+ + +++
Sbjct: 511 LEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANI 570
Query: 62 YAAAG------RISDLIPMQEIKQ 79
YAAAG RI ++ + IK+
Sbjct: 571 YAAAGMWDGFARIRSIMKQRNIKK 594
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 48.9 bits (115), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 20/111 (18%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDS---LLI 58
L++A +LI+ +P K A WR+LLS C G+V+LAE+ ++ + P DS ++
Sbjct: 707 LNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEM---AILSDPKDSGSFTML 763
Query: 59 SSTYAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAGLSWVVID 109
S+ YA+ G ++ ++E K VKE G SW+ I+
Sbjct: 764 SNIYASKGMWTEAKKVRE--------------RMKVEGVVKEPGRSWIGIN 800
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 20/112 (17%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDS---LLI 58
L +A K+I+++P +T WRT+L+ACRV+ +L + I A P DS +L+
Sbjct: 648 LEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAE---KIIAMKPEDSAAYVLL 704
Query: 59 SSTYAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAGLSWVVIDN 110
S+ YA +G + ++++ ++E+ + KE G SW+ + N
Sbjct: 705 SNMYAESGDWQERAKVRKL-----------MNER---NVKKEPGYSWIEVKN 742
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 56/98 (57%), Gaps = 6/98 (6%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L EA K+++++P++ + W LL ACR++ +V +A+ V D + + P + L+S+
Sbjct: 468 LKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNI 527
Query: 62 YAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVK 99
YAAA D + +I+ +++ G+ + G S+V+
Sbjct: 528 YAAA---EDWEGVADIRSK---MKSMGVEKPSGASSVE 559
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 48.5 bits (114), Expect = 8e-07, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 15/111 (13%)
Query: 1 MLHEAYKLI-KSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLIS 59
++ EA +LI +S P A WRTLLSAC ++++ Y + I + +L+S
Sbjct: 654 LVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLS 713
Query: 60 STYAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAGLSWVVIDN 110
+ YA GR D+ M+ + +G ++ K+ GLSW+ ++N
Sbjct: 714 NLYAVNGRWEDVAEMRR--------------KIRGLASSKDPGLSWIEVNN 750
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 46/88 (52%)
Query: 1 MLHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISS 60
+L +AY LIK +P++ + W LL ACRVY D +L + + + + +++S+
Sbjct: 387 LLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSN 446
Query: 61 TYAAAGRISDLIPMQEIKQTNVVVENYG 88
Y+A+G D ++ + + +V G
Sbjct: 447 IYSASGLWKDASRIRNLMKQKGLVRASG 474
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Query: 1 MLHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDS---LL 57
ML +AY+LI +P++ +A W LLS CR+ D +LAE V+ + A P ++ +
Sbjct: 465 MLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAE---TVLKELIALEPWNAGNYVQ 521
Query: 58 ISSTYAAAGR 67
+S+ Y+ GR
Sbjct: 522 LSNIYSVGGR 531
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
EA +I S+P + D T W LL ACR+Y +V LA + ++ + T +L+ +
Sbjct: 562 FEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNM 621
Query: 62 YAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEA 101
YA D+ E Q + +E+ + +++G S V +
Sbjct: 622 YA------DMGLWDEASQVRMNMESKRIKKERGSSWVDSS 655
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 17 DATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISSTYAAAGRISDLIPMQE 76
D W +LL AC+++G+V+L E + + I +P +L+S+ YA+AGR E
Sbjct: 537 DGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGR------WNE 590
Query: 77 IKQTNVVVENYGLHEKKGGSTVK 99
+ +T ++ + G+ + G S+++
Sbjct: 591 VAKTRALLNDKGMKKVPGCSSIE 613
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
+ EAY+ I+ + ++ + W LL ACRV+ D + D + + +L+S+
Sbjct: 462 VKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNI 521
Query: 62 YAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVK 99
YA AGR +E+ ++++ GL + G S V+
Sbjct: 522 YAKAGR------WEEVTNIRNIMKSKGLKKNPGASNVE 553
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 47.8 bits (112), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L +AY+ I LPI WR LL+AC + ++ LAE V + I + +H D +++S+
Sbjct: 383 LEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNL 442
Query: 62 YAAAGRISDLIPMQEIKQTNVVVE---------NYGLHEKKGGSTVKEA 101
YA + + ++++ + V+ N +HE G VK A
Sbjct: 443 YARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSA 491
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 39/65 (60%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L+EA + I + ++ D W+TLLSAC+ G+V LA+ + I I + T +L+ S
Sbjct: 626 LNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSM 685
Query: 62 YAAAG 66
+A++G
Sbjct: 686 HASSG 690
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 14/105 (13%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L EA ++I ++PI + W LL++C V+ + +LA + D + + + +S+
Sbjct: 369 LQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNA 428
Query: 62 YAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAGLSWV 106
YAA GR D +++ + + G EK KE GLSWV
Sbjct: 429 YAADGRFEDAAKARKL------LRDRG--EK------KETGLSWV 459
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 19/110 (17%)
Query: 4 EAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSL---LISS 60
EA ++IK +P+ DA W LL +CR +G+ +L + D + + PT+S+ +S+
Sbjct: 521 EAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKEL--VEPTNSMSYIQMSN 578
Query: 61 TYAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAGLSWVVIDN 110
Y A G ++ N + E + KE LSW I N
Sbjct: 579 IYNAEGSFNE--------------ANLSIKEMETWRVRKEPDLSWTEIGN 614
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 40/65 (61%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L EAY++IK++ ++ D W LL+ACR +G+++LA + + + + LL++S
Sbjct: 441 LVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSL 500
Query: 62 YAAAG 66
YA AG
Sbjct: 501 YANAG 505
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 45/79 (56%)
Query: 1 MLHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISS 60
L +A +I ++P K W TLL+AC ++G+ ++ ++ + + + +P +LI++
Sbjct: 534 FLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIAN 593
Query: 61 TYAAAGRISDLIPMQEIKQ 79
YAAAG S L ++ I +
Sbjct: 594 MYAAAGSWSKLAEVRTIMR 612
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 14/105 (13%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
+ EA++ IK +P K A +LL ACRV+ V + E V + I + + +++S+
Sbjct: 409 IDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNL 468
Query: 62 YAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAGLSWV 106
YA+AGR +D+ ++ + V KE G SW+
Sbjct: 469 YASAGRWADVNNVRAMMMQKAV--------------TKEPGRSWI 499
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 39/63 (61%)
Query: 4 EAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISSTYA 63
EA I ++P+K A+AW LLSACR++ +V LA + + + ++ + +L+S+ YA
Sbjct: 467 EAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYA 526
Query: 64 AAG 66
AG
Sbjct: 527 DAG 529
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 20/111 (18%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDS---LLI 58
L +A KL+ + + DA WRTLL ACRV ++ LAEY + A P D+ L+
Sbjct: 411 LDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAA---KKVIALDPEDAGTYTLL 467
Query: 59 SSTYAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAGLSWVVID 109
S+ YA + + +++ + + G+ KE G SW+ ++
Sbjct: 468 SNIYANSQK------WDSVEEIRTRMRDRGIK--------KEPGCSWIEVN 504
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 12/106 (11%)
Query: 1 MLHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDS---LL 57
+L EA +L++S+P++ DA W LL CR++G+V+L E + P+DS +L
Sbjct: 541 LLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGE---KAAKKLLELDPSDSGIYVL 597
Query: 58 ISSTYAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAGL 103
+ Y A D K+ ++ G+ + G S+++ G+
Sbjct: 598 LDGMYGEANMWED------AKRARRMMNERGVEKIPGCSSIEVNGI 637
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 46.6 bits (109), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 14/109 (12%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L EA + I+S I WR LLSAC+ +G +L Y + + + + + + +S
Sbjct: 576 LKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGI 635
Query: 62 YAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAGLSWVVIDN 110
Y A GR+ D VE H + G + KE G SW+ + N
Sbjct: 636 YTALGRMRD-------------VERVWKHMRANGVS-KEVGCSWIELKN 670
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 46.6 bits (109), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 49/88 (55%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L EA + IK +P+K +AT WR+ L + + +GD + E + + + + +L+S+
Sbjct: 369 LEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNI 428
Query: 62 YAAAGRISDLIPMQEIKQTNVVVENYGL 89
YA R +D+ +E+ + + V ++ G+
Sbjct: 429 YAGVNRWTDVEKTRELMKDHRVNKSPGI 456
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 46.2 bits (108), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 6/98 (6%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L EAY I + ++ + W TLLS+C V+ +++LAE V + I + + + +L+ +
Sbjct: 496 LEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNM 555
Query: 62 YAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVK 99
YA+ GR +E+ + + + GL +K S ++
Sbjct: 556 YASNGR------WKEMAKLRLRMRKKGLRKKPACSWIE 587
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 45.8 bits (107), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 14/108 (12%)
Query: 1 MLHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISS 60
+L EA + I+ +PI+ D W +LLSACRV+ ++ L + + + + + +++
Sbjct: 566 LLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALAN 625
Query: 61 TYAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAGLSWVVI 108
Y+A G+ + +++ K G KE G SW+ +
Sbjct: 626 LYSACGKWEEAAKIRK--------------SMKDGRVKKEQGFSWIEV 659
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 45.8 bits (107), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 14/107 (13%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L EA+K I+ +P+ D W LL+ACR++ + L E I + +L+ +
Sbjct: 649 LQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNL 708
Query: 62 YAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAGLSWVVI 108
YA G+ ++ ++ + + N G TV +AG SWV +
Sbjct: 709 YADCGKWREVAKVRRMMKEN-------------GLTV-DAGCSWVEV 741
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 45.8 bits (107), Expect = 6e-06, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 38/65 (58%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L EAY+ IK +P DA+ W +L++ CR++ + + + +K+ +++I L+S+
Sbjct: 656 LKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNI 715
Query: 62 YAAAG 66
YA G
Sbjct: 716 YAEEG 720
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 45.8 bits (107), Expect = 6e-06, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 39/70 (55%)
Query: 1 MLHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISS 60
+L EA K ++ +P+K D +LS C+VYG+V++ E V + + + + ++
Sbjct: 386 LLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAG 445
Query: 61 TYAAAGRISD 70
Y+AAGR +
Sbjct: 446 LYSAAGRFDE 455
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 45.8 bits (107), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L A ++ K++P+K D+ W +LLS+CR G++ +A D + + + +L+++
Sbjct: 394 LERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANI 453
Query: 62 YAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVK 99
YA G+ D+ ++++ + N + + GGS ++
Sbjct: 454 YADLGKWEDVSRLRKM------IRNENMKKTPGGSLIE 485
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 45.4 bits (106), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISST 61
L EA +LIK++ ++ W LL ACR++ + ++AE + + + + +L+S+
Sbjct: 437 LQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNV 496
Query: 62 YAAAG------RISDLIPMQEIKQTNVV 83
YA+AG R+ LI + +K+T V
Sbjct: 497 YASAGDWGGVLRVRKLIKEKGLKKTPAV 524
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 45.4 bits (106), Expect = 8e-06, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 20/111 (18%)
Query: 2 LHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDS---LLI 58
L +AY + +P++ +A W TLL AC Y + L V N++ A D+ +LI
Sbjct: 720 LDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGH---SVANHLLQAESDDTGNHVLI 776
Query: 59 SSTYAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAGLSWVVID 109
S+ YAA + V+E L +KK K AG SW+ +D
Sbjct: 777 SNMYAADAKWEG------------VMELRNLMKKK--EMKKPAGCSWLEVD 813
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 45.4 bits (106), Expect = 8e-06, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 15/107 (14%)
Query: 1 MLHEAYKLIKSLPIKGDATAWRTLLSACRVYGDVKLAEYVKDVINNIYAAHPTDSLLISS 60
+ EA +LI +P++ D T W +LL+AC + + L + + + + P+ +S+
Sbjct: 595 LFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSN 654
Query: 61 TYAAAGRISDLIPMQEIKQTNVVVENYGLHEKKGGSTVKEAGLSWVV 107
YA G L ++E KK G+ KE+G+SW++
Sbjct: 655 AYATLGMWDQLSKVREAA-------------KKLGA--KESGMSWII 686