Miyakogusa Predicted Gene

Lj6g3v2274990.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2274990.1 Non Chatacterized Hit- tr|B6SZH9|B6SZH9_MAIZE
Putative uncharacterized protein OS=Zea mays PE=2
SV=1,32.29,1e-18,coiled-coil,NULL; seg,NULL,CUFF.61009.1
         (276 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G58070.1 | Symbols:  | unknown protein; Has 286 Blast hits to...   100   1e-21

>AT1G58070.1 | Symbols:  | unknown protein; Has 286 Blast hits to
           266 proteins in 81 species: Archae - 2; Bacteria - 25;
           Metazoa - 90; Fungi - 19; Plants - 78; Viruses - 4;
           Other Eukaryotes - 68 (source: NCBI BLink). |
           chr1:21502968-21503822 FORWARD LENGTH=284
          Length = 284

 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 98/278 (35%), Positives = 131/278 (47%), Gaps = 37/278 (13%)

Query: 18  VDTSRPFTSVKEAVAIFGERLLV-GEIYSPKPFSDTPYSPIIKREPSWRFSSPSPNYPIK 76
           VDTSRPF+SVKEAVAIFG+R+++  + ++    S +P +       + +  SP  +  +K
Sbjct: 17  VDTSRPFSSVKEAVAIFGQRIMLPVQTHTMNSKSASPIAASRSINQNAKPRSPGLSQTVK 76

Query: 77  PKEENNVNALSDTA------FSPPVKREPS-----WRFSS---PSPIKPKEENNENALFD 122
                   ++S TA       SP + +  S     W+  S   PSP  PKEE     + D
Sbjct: 77  LVIPTASPSISQTAKLVSPIASPSISQTASSSSSPWKQRSLLPPSPQGPKEE-----IMD 131

Query: 123 TXXXXXXXXXXXXXXXXMLKERGSETEVALATLNAELHKNMSKLXXXXXXXXXXXXXXXT 182
                            MLKER SETEVALATLNAELHKN SK+               T
Sbjct: 132 VLKKLEAEITETKTEVKMLKERESETEVALATLNAELHKNKSKIAKAEADAAGKSAAAMT 191

Query: 183 KTVRFE--IERENGEKELNMIXXXXXXXXXXXXXXXXXXXTETLAKIL--SLGENDHLFG 238
           K+V F+   E+ENGE +                         +LA+IL  + G  D  F 
Sbjct: 192 KSVSFKDTKEKENGEDQ-----------RRKELMRKMQKEYPSLAQILDSNKGNRDGYFA 240

Query: 239 G--KKVRKQKPIIPLVGDFFFKRKSSSTTNHHNPLYAS 274
              K  +K+KPIIPLVGDFFF +K  S+     PLY +
Sbjct: 241 NTKKTKKKKKPIIPLVGDFFFFKKKGSSPEISGPLYTT 278