Miyakogusa Predicted Gene

Lj6g3v2274450.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2274450.1 Non Chatacterized Hit- tr|I1MDN3|I1MDN3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.39144 PE,83.97,0,GB DEF:
HYPOTHETICAL PROTEIN AT1G61000/T7P1_14,NULL; MEMBRALIN/KINETOCHORE
PROTEIN NUF2,NULL; Membra,CUFF.60966.1
         (670 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G60995.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   793   0.0  

>AT1G60995.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: 20 plant
           structures; EXPRESSED DURING: 10 growth stages; CONTAINS
           InterPro DOMAIN/s: Membralin (InterPro:IPR019144); Has
           172 Blast hits to 170 proteins in 70 species: Archae -
           0; Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 38;
           Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).
           | chr1:22465768-22470575 REVERSE LENGTH=623
          Length = 623

 Score =  793 bits (2047), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/674 (62%), Positives = 486/674 (72%), Gaps = 72/674 (10%)

Query: 1   MDPEQTFIRVQERLSQLLPPKIRVGLEYLCLFTAISFFCILVVMHANYVQQPGCSAELSG 60
           MDPEQTFIRVQER SQ+L P+IR  LEY  LF AI+ FCILVVMHANYVQQPGCS+EL+G
Sbjct: 1   MDPEQTFIRVQERFSQILTPRIRGFLEYTYLFVAITLFCILVVMHANYVQQPGCSSELTG 60

Query: 61  VLTSEAQLIQIKITSAGLWSHNDSQSNIIDPPQTQVLKDKIEVSDVTGDDLTFLASKFWW 120
           V  +EA+L+QIKITSAGLWS ND +S   D P+     D +EVS                
Sbjct: 61  VELAEAELMQIKITSAGLWSRND-ESTAADVPRVVAATDSLEVS---------------- 103

Query: 121 NWIASADRRGKSVFKFWKTDTDFHEHQPETTTTSPNSRPVVQDAVINIDKEEPRNSFSSS 180
                            KTD        E++T+  N+     D  + IDKEEPR+SFS S
Sbjct: 104 -----------------KTDQ-------ESSTSEENT----DDTFVKIDKEEPRSSFSVS 135

Query: 181 AKETIKAIIIMIGKKWYRRITFISRHTAQIIASFQKLWDIAGVHLNIDIPKWMHILRLDK 240
           AKE ++A I+   KK YRRI+F+ +HTA+I+   +K+W+I G+ LN+D+PK +H+L +DK
Sbjct: 136 AKENVRAAILRFLKKCYRRISFVLQHTARILRGVRKIWNIIGIPLNLDVPKLLHVLYMDK 195

Query: 241 LNSYAVQWLKTKSKLSEPLYLYTMEKGYFLLPESAKSHHNIRTVNVSISAWHSCFGNRWQ 300
           +N YAVQWL++K++  EP YLYTMEKGYFLLP+ AKS HNIRT NVSISA H CFGNRWQ
Sbjct: 196 VNYYAVQWLESKTQEFEPTYLYTMEKGYFLLPDEAKSRHNIRTANVSISARHPCFGNRWQ 255

Query: 301 QLLINRFVKYDTILINSLLSSPGQGYLYNYQSKEFYNLSYAHEAPEGPARFGDYLVMKCG 360
           QLLINR V YDTI++NSL +S GQGYLYNYQ++EFYNLSY+ E P+G A FGDYLV KCG
Sbjct: 256 QLLINRVVGYDTIIMNSLQNSAGQGYLYNYQTREFYNLSYSQELPDGSAHFGDYLVTKCG 315

Query: 361 VXXXXXXXXXXXXXXXXXXXRETQTRMLKFTVQLQHHARHRLPTFQLIFVHVIESLVFVP 420
           V                   RETQTRMLKFTVQLQHHA+HRLPTFQLIFVHVIESLVFVP
Sbjct: 316 VLMMSLFVFFTTTMSVSFTLRETQTRMLKFTVQLQHHAQHRLPTFQLIFVHVIESLVFVP 375

Query: 421 IMIGILFFLFEFYDDQLLAFMVLILVWLCELFTLISVRTPISMKFFPRFFLLYFLVFHIY 480
           IMIGILFFLFEFYDDQLLAFMVL+LVWLCELFTLISVRTPISMKFFPRFFLLYFLVFHIY
Sbjct: 376 IMIGILFFLFEFYDDQLLAFMVLVLVWLCELFTLISVRTPISMKFFPRFFLLYFLVFHIY 435

Query: 481 FFSYAYGFSYLALFTTAAFMLHLILYFWDRFEVPALQRFMQNRRS---QHPDFHITSSTI 537
           FFSYAYGFSYLAL TTAAFM HLILYFW+RFEVPALQRF+Q+R+S   QHPDFHITSSTI
Sbjct: 436 FFSYAYGFSYLALMTTAAFMQHLILYFWNRFEVPALQRFLQSRQSHLQQHPDFHITSSTI 495

Query: 538 LASTLHITRLN--TRNQGLSVTDFPSGAGFRPGFNQSTPQNRPGI--MDSQGRSENNPDR 593
           LASTLHITRLN  TRN+       PSG       N +TP          + G    NP +
Sbjct: 496 LASTLHITRLNRTTRNRT------PSGP------NHTTPNQNTETRSFTADGGGVGNPAQ 543

Query: 594 VANPAQIPDQADIRQAERGPNP---GSMNSFSSLLLWILGGASSEGLNSFFSMFRDVR-- 648
                +  +   +  AE  PNP   G+M+SFSS+LLWILGGASSEGLNSF SMFRDVR  
Sbjct: 544 YQEQQEENEANTV-PAE--PNPQQAGAMSSFSSMLLWILGGASSEGLNSFLSMFRDVRDE 600

Query: 649 DQGQVFTETPGHEN 662
           D+ QVF +T   +N
Sbjct: 601 DEAQVFADTSPPQN 614