Miyakogusa Predicted Gene

Lj6g3v2272080.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2272080.1 tr|Q8H178|Q8H178_ARATH At1g60870 OS=Arabidopsis
thaliana GN=At1g60870 PE=2 SV=1,58.47,0.00000000002, ,CUFF.60952.1
         (147 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G60870.1 | Symbols: MEE9 | maternal effect embryo arrest 9 | ...   100   4e-22

>AT1G60870.1 | Symbols: MEE9 | maternal effect embryo arrest 9 |
           chr1:22409712-22410227 FORWARD LENGTH=147
          Length = 147

 Score =  100 bits (248), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 68/147 (46%), Positives = 85/147 (57%)

Query: 1   MEALLSQFTFLSDQALQDKNFDPSTIEDLMKLFEIESYKXXXXXXXXXXXXXXXXXXXXX 60
           MEAL+  FT LSDQAL DK FDPS IEDLM+LFE++SYK                     
Sbjct: 1   MEALIHHFTLLSDQALVDKTFDPSRIEDLMRLFEVDSYKAWAALESEQQQELEEAEESLR 60

Query: 61  XXXNYLESAMESAMDXXXXXXXXXXXMSRDEVDSLVQTAESARKMGNLMEKAASVASKRY 120
                L+  ME  M+           M   E+  L + AE+AR+ GNLMEKAA+VA+KR+
Sbjct: 61  EAELELDRDMEWGMEEYRRTLEEMERMEAAELKELEEKAETARRTGNLMEKAATVAAKRH 120

Query: 121 IEAALNSATASMKSAWRGISSGKVHPS 147
           I AA+ SA ASM+SAW+  +  KVHPS
Sbjct: 121 IAAAMGSAAASMRSAWKTAAGNKVHPS 147