Miyakogusa Predicted Gene

Lj6g3v2272050.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2272050.1 Non Chatacterized Hit- tr|I1MDP3|I1MDP3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20344
PE,86.87,0,seg,NULL; no description,NULL; RNI-like,NULL; PUTATIVE
UNCHARACTERIZED PROTEIN,NULL; KELCH REPEAT DO,CUFF.60948.1
         (421 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G10780.1 | Symbols:  | F-box/RNI-like superfamily protein | c...   563   e-160

>AT1G10780.1 | Symbols:  | F-box/RNI-like superfamily protein |
           chr1:3592875-3594310 REVERSE LENGTH=418
          Length = 418

 Score =  563 bits (1450), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 271/419 (64%), Positives = 332/419 (79%), Gaps = 1/419 (0%)

Query: 3   MEYVPDVILQCILSHISNARDVAACNCVSKRWKDSMAYVRSLYFPRNSFDSYSADESPDD 62
           M+ +PD ILQ ILS++++ARDVAACNCVSKRWK+S   V+S+ F RNSF+S    +  D 
Sbjct: 1   MDSLPDAILQYILSYLTSARDVAACNCVSKRWKESTDSVKSVVFHRNSFESIMETDDSDS 60

Query: 63  VVKRMVSTVVQLEALVVYPPFSPRGLASWLSLVGLSLSRLELRMDNLADNQASCESPSKL 122
           +V++M+S+  +LE LVVY PF+  GLASW+  V  SL  LELRMDNLA  +   E P KL
Sbjct: 61  IVRKMISSSRRLEELVVYSPFTSSGLASWMMHVSSSLRLLELRMDNLASEEVVVEGPLKL 120

Query: 123 DCIGAARNLESLKLWGVLMIHSPKWDVFQNLRTLEIVGARLEDSVLNVVLQSCPYLTRLL 182
           DCIG A+NLE LKLWGVLM+  PKWD+F NLR+LEIVGA+++DS L+  L++CP L+ LL
Sbjct: 121 DCIGVAKNLEILKLWGVLMMSPPKWDMFPNLRSLEIVGAKMDDSSLSHALRACPNLSNLL 180

Query: 183 LLGCEGIRSISIDLPYLEQCKLDFYGLGNCSLSLTSPKIESLEVQGCSWIRVPETKHLKN 242
           LL CEG++SISIDLPYLE CKLDFYG GN  L LTS ++ SL+VQGCSWIRVPETK LKN
Sbjct: 181 LLACEGVKSISIDLPYLEHCKLDFYGQGNTLLVLTSQRLVSLDVQGCSWIRVPETKFLKN 240

Query: 243 LTISNSAGRVYNIDFGNLSALEFLSMRGIQWCWDAICKMLKLASEVKHLYMKVEFTGDYE 302
           L+IS+  GRVY +DF NLS+LE LS+RG+QWCWDAIC +L+ A +VKHL+MKVEFTG+ E
Sbjct: 241 LSISSVTGRVYMVDFNNLSSLEALSIRGVQWCWDAICMILQQARDVKHLFMKVEFTGN-E 299

Query: 303 ALQAFPEIDFVEFFNSHPKLRKFDVHGAMFAALCQRNSLKHVGPGFVIPCLEEVVITVRS 362
           ALQ FPEIDFVEFFN+HPKL+ FD+HGAMFAALCQ+NSLK +  GF IPCLEEVVITVRS
Sbjct: 300 ALQPFPEIDFVEFFNNHPKLQTFDIHGAMFAALCQKNSLKKLETGFTIPCLEEVVITVRS 359

Query: 363 PLKAEQKMSTLESLLKYGKNLRTMVIKILQMKXXXXXXXXXXXXICRFRYMNYGIVRIE 421
           PL AEQKM+TLESL+KY + L+ MVI+IL+MK            IC+FR+MN  +V IE
Sbjct: 360 PLNAEQKMNTLESLVKYARGLKRMVIRILRMKSNHSSADDFCDDICKFRHMNEHLVHIE 418