Miyakogusa Predicted Gene

Lj6g3v2245640.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2245640.1 Non Chatacterized Hit- tr|I1J491|I1J491_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,76.36,8e-16,NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER,NULL;
NUCLEOTIDE-SUGAR TRANSMEMBRANE
TRANSPORTER,Nucleoti,NODE_1923_length_1416_cov_64.768364.path2.1
         (159 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G35335.1 | Symbols:  | Nucleotide-sugar transporter family pr...   194   3e-50

>AT4G35335.1 | Symbols:  | Nucleotide-sugar transporter family
           protein | chr4:16807286-16810015 FORWARD LENGTH=352
          Length = 352

 Score =  194 bits (492), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 105/149 (70%), Positives = 117/149 (78%), Gaps = 10/149 (6%)

Query: 1   MEYRKIKDEDKVRD--SDVESV-----AVAVNNTVSDGETKVDSHRTQVQWKRKSMVTFA 53
           MEYRKIKDED   D  SD+ESV      VA +N ++     V S   ++ WKRK +VT A
Sbjct: 1   MEYRKIKDEDD-HDVASDIESVKGKSHTVASSN-IAMATLGVGSSE-RINWKRKGVVTCA 57

Query: 54  LTILTSSQAILIVWSKRAGKYEYSVTTANFMVETLKCAISLVALGRIWNKEGVTDDNRLT 113
           LTILTSSQAILIVWSKRAGKYEYSVTTANF+V TLKCA+SL+AL RIW  EGVTDDNRL+
Sbjct: 58  LTILTSSQAILIVWSKRAGKYEYSVTTANFLVGTLKCALSLLALTRIWKNEGVTDDNRLS 117

Query: 114 TTLDEVIVYPIPAALYLVKNLLQYYIFAY 142
           TT DEV V+PIPAALYL KNLLQYYIFAY
Sbjct: 118 TTFDEVKVFPIPAALYLFKNLLQYYIFAY 146