Miyakogusa Predicted Gene

Lj6g3v2221990.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2221990.1 tr|I3S0L6|I3S0L6_LOTJA Methylenetetrahydrofolate
reductase OS=Lotus japonicus PE=2
SV=1,99.69,0,METHYLENETETRAHYDROFOLATE REDUCTASE,NULL;
METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE
RELA,CUFF.60905.1
         (323 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G44160.1 | Symbols: MTHFR2 | methylenetetrahydrofolate reduct...   560   e-160
AT3G59970.3 | Symbols: MTHFR1 | methylenetetrahydrofolate reduct...   541   e-154
AT3G59970.1 | Symbols: MTHFR1 | methylenetetrahydrofolate reduct...   539   e-153
AT3G59970.2 | Symbols: MTHFR1 | methylenetetrahydrofolate reduct...   538   e-153

>AT2G44160.1 | Symbols: MTHFR2 | methylenetetrahydrofolate reductase
           2 | chr2:18262301-18265185 FORWARD LENGTH=594
          Length = 594

 Score =  560 bits (1443), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 262/327 (80%), Positives = 289/327 (88%), Gaps = 6/327 (1%)

Query: 1   MKVIEKIHEAAASDPNKVVFSFEFFPPKTEDGVVNLLERMDRMVAHSPSFCDITWGAGGS 60
           MKVI+KI   A  D  K  FSFEFFPPKTEDGV NL ERMDRMVA+ P+FCDITWGAGGS
Sbjct: 1   MKVIDKIQSLA--DEGKTAFSFEFFPPKTEDGVDNLFERMDRMVAYGPTFCDITWGAGGS 58

Query: 61  TADVTLDIAKKMQNTVGVETMMHLTCTNMPVEKIDDALETIKSNGLQNVLALRGDPPHGQ 120
           TAD+TLDIA +MQN V VE+MMHLTCTNMPVEKID ALETI+SNG+QNVLALRGDPPHGQ
Sbjct: 59  TADLTLDIASRMQNVVCVESMMHLTCTNMPVEKIDHALETIRSNGIQNVLALRGDPPHGQ 118

Query: 121 DKFVQVEGGFACARDLVKHIRAKHGDYFGITIAGYPEAHPDAIGSNGLATPEDYQNDLTY 180
           DKFVQVEGGF CA DLV HIR+K+GDYFGIT+AGYPEAHPD IG NGLA+ E YQ+DL Y
Sbjct: 119 DKFVQVEGGFDCALDLVNHIRSKYGDYFGITVAGYPEAHPDVIGENGLASNEAYQSDLEY 178

Query: 181 LKSKVDAGADLIITQLFYDTDIFLKFANDCRQIGITCPIVPGIMPINNYKGFIRMTGFCK 240
           LK K+DAGADLI+TQLFYDTDIFLKF NDCRQIGI+CPIVPGIMPINNY+GF+RMTGFCK
Sbjct: 179 LKKKIDAGADLIVTQLFYDTDIFLKFVNDCRQIGISCPIVPGIMPINNYRGFLRMTGFCK 238

Query: 241 TKIPAEIMAALEPIKDNEEAVKAYGIHLGTEMCKKILAHGFKTLHLYTLNLEKSALAILK 300
           TKIP E+MAALEPIKDNEEAVKAYGIHLGTEMCKK+LAHG K+LHLYTLN+EKSALAIL 
Sbjct: 239 TKIPVEVMAALEPIKDNEEAVKAYGIHLGTEMCKKMLAHGVKSLHLYTLNMEKSALAILM 298

Query: 301 NLGLIEET----SIPRTRPANAIQAKE 323
           NLG+I+E+    S+P  RPAN  + KE
Sbjct: 299 NLGMIDESKISRSLPWRRPANVFRTKE 325


>AT3G59970.3 | Symbols: MTHFR1 | methylenetetrahydrofolate reductase
           1 | chr3:22151303-22154323 FORWARD LENGTH=592
          Length = 592

 Score =  541 bits (1395), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 250/327 (76%), Positives = 286/327 (87%), Gaps = 6/327 (1%)

Query: 1   MKVIEKIHEAAASDPNKVVFSFEFFPPKTEDGVVNLLERMDRMVAHSPSFCDITWGAGGS 60
           MKV++KI   + ++  +  FSFEFFPPKTEDGV NL ERMDR+V++ P+FCDITWGAGGS
Sbjct: 1   MKVVDKIK--SVTEQGQTAFSFEFFPPKTEDGVENLFERMDRLVSYGPTFCDITWGAGGS 58

Query: 61  TADVTLDIAKKMQNTVGVETMMHLTCTNMPVEKIDDALETIKSNGLQNVLALRGDPPHGQ 120
           TAD+TL+IA +MQN + VETMMHLTCTNMP+EKID ALETI+SNG+QNVLALRGDPPHGQ
Sbjct: 59  TADLTLEIASRMQNVICVETMMHLTCTNMPIEKIDHALETIRSNGIQNVLALRGDPPHGQ 118

Query: 121 DKFVQVEGGFACARDLVKHIRAKHGDYFGITIAGYPEAHPDAIGSNGLATPEDYQNDLTY 180
           DKFVQVEGGFACA DLV HIR+K+GDYFGIT+AGYPEAHPD I ++GLATPE YQ+DL Y
Sbjct: 119 DKFVQVEGGFACALDLVNHIRSKYGDYFGITVAGYPEAHPDVIEADGLATPESYQSDLAY 178

Query: 181 LKSKVDAGADLIITQLFYDTDIFLKFANDCRQIGITCPIVPGIMPINNYKGFIRMTGFCK 240
           LK KVDAGADLI+TQLFYDTDIFLKF NDCRQIGI CPIVPGIMPI+NYKGF+RM GFCK
Sbjct: 179 LKKKVDAGADLIVTQLFYDTDIFLKFVNDCRQIGINCPIVPGIMPISNYKGFLRMAGFCK 238

Query: 241 TKIPAEIMAALEPIKDNEEAVKAYGIHLGTEMCKKILAHGFKTLHLYTLNLEKSALAILK 300
           TKIPAE+ AALEPIKDN+EAVKAYGIH  TEMCKKILAHG  +LHLYTLN++KSA+ IL 
Sbjct: 239 TKIPAELTAALEPIKDNDEAVKAYGIHFATEMCKKILAHGITSLHLYTLNVDKSAIGILM 298

Query: 301 NLGLIEET----SIPRTRPANAIQAKE 323
           NLGLI+E+    S+P  RPAN  + KE
Sbjct: 299 NLGLIDESKISRSLPWRRPANVFRTKE 325


>AT3G59970.1 | Symbols: MTHFR1 | methylenetetrahydrofolate reductase
           1 | chr3:22151303-22153412 FORWARD LENGTH=421
          Length = 421

 Score =  539 bits (1388), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 250/327 (76%), Positives = 286/327 (87%), Gaps = 6/327 (1%)

Query: 1   MKVIEKIHEAAASDPNKVVFSFEFFPPKTEDGVVNLLERMDRMVAHSPSFCDITWGAGGS 60
           MKV++KI   + ++  +  FSFEFFPPKTEDGV NL ERMDR+V++ P+FCDITWGAGGS
Sbjct: 1   MKVVDKI--KSVTEQGQTAFSFEFFPPKTEDGVENLFERMDRLVSYGPTFCDITWGAGGS 58

Query: 61  TADVTLDIAKKMQNTVGVETMMHLTCTNMPVEKIDDALETIKSNGLQNVLALRGDPPHGQ 120
           TAD+TL+IA +MQN + VETMMHLTCTNMP+EKID ALETI+SNG+QNVLALRGDPPHGQ
Sbjct: 59  TADLTLEIASRMQNVICVETMMHLTCTNMPIEKIDHALETIRSNGIQNVLALRGDPPHGQ 118

Query: 121 DKFVQVEGGFACARDLVKHIRAKHGDYFGITIAGYPEAHPDAIGSNGLATPEDYQNDLTY 180
           DKFVQVEGGFACA DLV HIR+K+GDYFGIT+AGYPEAHPD I ++GLATPE YQ+DL Y
Sbjct: 119 DKFVQVEGGFACALDLVNHIRSKYGDYFGITVAGYPEAHPDVIEADGLATPESYQSDLAY 178

Query: 181 LKSKVDAGADLIITQLFYDTDIFLKFANDCRQIGITCPIVPGIMPINNYKGFIRMTGFCK 240
           LK KVDAGADLI+TQLFYDTDIFLKF NDCRQIGI CPIVPGIMPI+NYKGF+RM GFCK
Sbjct: 179 LKKKVDAGADLIVTQLFYDTDIFLKFVNDCRQIGINCPIVPGIMPISNYKGFLRMAGFCK 238

Query: 241 TKIPAEIMAALEPIKDNEEAVKAYGIHLGTEMCKKILAHGFKTLHLYTLNLEKSALAILK 300
           TKIPAE+ AALEPIKDN+EAVKAYGIH  TEMCKKILAHG  +LHLYTLN++KSA+ IL 
Sbjct: 239 TKIPAELTAALEPIKDNDEAVKAYGIHFATEMCKKILAHGITSLHLYTLNVDKSAIGILM 298

Query: 301 NLGLIEET----SIPRTRPANAIQAKE 323
           NLGLI+E+    S+P  RPAN  + KE
Sbjct: 299 NLGLIDESKISRSLPWRRPANVFRTKE 325


>AT3G59970.2 | Symbols: MTHFR1 | methylenetetrahydrofolate reductase
           1 | chr3:22151303-22153989 FORWARD LENGTH=407
          Length = 407

 Score =  538 bits (1387), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 250/327 (76%), Positives = 286/327 (87%), Gaps = 6/327 (1%)

Query: 1   MKVIEKIHEAAASDPNKVVFSFEFFPPKTEDGVVNLLERMDRMVAHSPSFCDITWGAGGS 60
           MKV++KI   + ++  +  FSFEFFPPKTEDGV NL ERMDR+V++ P+FCDITWGAGGS
Sbjct: 1   MKVVDKIK--SVTEQGQTAFSFEFFPPKTEDGVENLFERMDRLVSYGPTFCDITWGAGGS 58

Query: 61  TADVTLDIAKKMQNTVGVETMMHLTCTNMPVEKIDDALETIKSNGLQNVLALRGDPPHGQ 120
           TAD+TL+IA +MQN + VETMMHLTCTNMP+EKID ALETI+SNG+QNVLALRGDPPHGQ
Sbjct: 59  TADLTLEIASRMQNVICVETMMHLTCTNMPIEKIDHALETIRSNGIQNVLALRGDPPHGQ 118

Query: 121 DKFVQVEGGFACARDLVKHIRAKHGDYFGITIAGYPEAHPDAIGSNGLATPEDYQNDLTY 180
           DKFVQVEGGFACA DLV HIR+K+GDYFGIT+AGYPEAHPD I ++GLATPE YQ+DL Y
Sbjct: 119 DKFVQVEGGFACALDLVNHIRSKYGDYFGITVAGYPEAHPDVIEADGLATPESYQSDLAY 178

Query: 181 LKSKVDAGADLIITQLFYDTDIFLKFANDCRQIGITCPIVPGIMPINNYKGFIRMTGFCK 240
           LK KVDAGADLI+TQLFYDTDIFLKF NDCRQIGI CPIVPGIMPI+NYKGF+RM GFCK
Sbjct: 179 LKKKVDAGADLIVTQLFYDTDIFLKFVNDCRQIGINCPIVPGIMPISNYKGFLRMAGFCK 238

Query: 241 TKIPAEIMAALEPIKDNEEAVKAYGIHLGTEMCKKILAHGFKTLHLYTLNLEKSALAILK 300
           TKIPAE+ AALEPIKDN+EAVKAYGIH  TEMCKKILAHG  +LHLYTLN++KSA+ IL 
Sbjct: 239 TKIPAELTAALEPIKDNDEAVKAYGIHFATEMCKKILAHGITSLHLYTLNVDKSAIGILM 298

Query: 301 NLGLIEET----SIPRTRPANAIQAKE 323
           NLGLI+E+    S+P  RPAN  + KE
Sbjct: 299 NLGLIDESKISRSLPWRRPANVFRTKE 325