Miyakogusa Predicted Gene

Lj6g3v2221940.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2221940.3 tr|D3AWK7|D3AWK7_POLPA Phosphatidylserine
decarboxylase proenzyme 2 OS=Polysphondylium pallidum
GN=P,59.7,0.000000000000002,PS_Dcarbxylase,Phosphatidylserine
decarboxylase-related; PHOSPHATIDYLSERINE DECARBOXYLASE,NULL;
PHOS,CUFF.60908.3
         (72 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G57190.1 | Symbols: PSD2 | phosphatidylserine decarboxylase 2...   116   3e-27
AT4G25970.1 | Symbols: PSD3 | phosphatidylserine decarboxylase 3...   115   5e-27

>AT5G57190.1 | Symbols: PSD2 | phosphatidylserine decarboxylase 2 |
           chr5:23171531-23175364 REVERSE LENGTH=635
          Length = 635

 Score =  116 bits (290), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 55/72 (76%), Positives = 63/72 (87%)

Query: 1   MVGSITFTKKKGDHVKKGDEFGYFSFGGSTVICVFEKNSITIDQDLLINSTRPLETLVSV 60
           MVGSI F +K+G+HVKKGDE GYFSFGGSTVICVFEK++I ID DLL+NS R LETLVSV
Sbjct: 559 MVGSINFVRKEGEHVKKGDELGYFSFGGSTVICVFEKDAIGIDNDLLVNSGRSLETLVSV 618

Query: 61  GMRLGVSTRKLS 72
           GM+LGVSTR  +
Sbjct: 619 GMQLGVSTRTFA 630


>AT4G25970.1 | Symbols: PSD3 | phosphatidylserine decarboxylase 3 |
           chr4:13184240-13189139 FORWARD LENGTH=635
          Length = 635

 Score =  115 bits (289), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 55/71 (77%), Positives = 63/71 (88%)

Query: 1   MVGSITFTKKKGDHVKKGDEFGYFSFGGSTVICVFEKNSITIDQDLLINSTRPLETLVSV 60
           MVGSI+F +++GDHVKKGDE GYFSFGGSTVICVFEK+SI ID+DLL NS R LETLV+V
Sbjct: 558 MVGSISFVRQEGDHVKKGDELGYFSFGGSTVICVFEKDSIKIDEDLLANSARSLETLVTV 617

Query: 61  GMRLGVSTRKL 71
           GM+LGVS  KL
Sbjct: 618 GMQLGVSFPKL 628