Miyakogusa Predicted Gene

Lj6g3v2218150.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2218150.1 tr|G7IPJ0|G7IPJ0_MEDTR Metacaspase-1 OS=Medicago
truncatula GN=MTR_2g008980 PE=4 SV=1,67.75,0,FAMILY NOT NAMED,NULL;
Peptidase_C14,Peptidase C14, caspase catalytic; no
description,NULL,CUFF.60827.1
         (292 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G02170.1 | Symbols: LOL3, ATMCPB1, MCP1B, ATMC1, MC1 | metaca...   258   4e-69
AT5G64240.2 | Symbols: AtMC3, MC3 | metacaspase 3 | chr5:2569583...   240   8e-64
AT4G25110.1 | Symbols: AtMC2, MC2 | metacaspase 2 | chr4:1288773...   230   1e-60
AT4G25110.2 | Symbols: AtMC2, MC2 | metacaspase 2 | chr4:1288773...   226   1e-59
AT5G64240.1 | Symbols: AtMC3, MC3 | metacaspase 3 | chr5:2569583...   213   1e-55
AT1G79340.1 | Symbols: AtMC4, MC4 | metacaspase 4 | chr1:2984284...    83   2e-16
AT1G79310.1 | Symbols: AtMC7, MC7 | metacaspase 7 | chr1:2983398...    83   2e-16
AT1G79330.1 | Symbols: AMC6, ATMCP2B, ATMC5, MC5 | metacaspase 5...    80   1e-15
AT5G04200.1 | Symbols: AtMC9, MC9 | metacaspase 9 | chr5:1153893...    77   2e-14
AT1G79320.1 | Symbols: AtMC6, MC6 | metacaspase 6 | chr1:2983668...    74   9e-14
AT1G16420.1 | Symbols: ATMC8, MC8 | metacaspase 8 | chr1:5612304...    66   2e-11

>AT1G02170.1 | Symbols: LOL3, ATMCPB1, MCP1B, ATMC1, MC1 |
           metacaspase 1 | chr1:411883-413426 FORWARD LENGTH=367
          Length = 367

 Score =  258 bits (659), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 135/295 (45%), Positives = 189/295 (64%), Gaps = 35/295 (11%)

Query: 23  HAYGHKRAVLFGINYGNTAAPRLKGSVNNAQCMKDFLINKLGFPGDSIWMFTDDSEEKTA 82
           H +G KRAV+ GI+Y   +   LKG +N+A+CM+  LINK  F  DSI M T++  +   
Sbjct: 75  HPHGRKRAVICGISY-RFSRHELKGCINDAKCMRHLLINKFKFSPDSILMLTEEETDPYR 133

Query: 83  IPTKHNMRVAMKWLVEDCQAGDSLVFYFSGQVARVKDHNGDELDGCDEAICPVDYEDEGK 142
           IPTK NMR+A+ WLV+ C AGDSLVF++SG  +R +++NGDE+DG DE +CP+D+E +G 
Sbjct: 134 IPTKQNMRMALYWLVQGCTAGDSLVFHYSGHGSRQRNYNGDEVDGYDETLCPLDFETQGM 193

Query: 143 IRDDEINTAIVRPLPHGAKLHALVDASFSGTILDLQFVYTKMNWIGYWGWKDHRPRRGDF 202
           I DDEIN  IVRPLPHG KLH+++DA  SGT+LDL F+  +MN  G + W+DHRPR G +
Sbjct: 194 IVDDEINATIVRPLPHGVKLHSIIDACHSGTVLDLPFL-CRMNRAGQYVWEDHRPRSGLW 252

Query: 203 KGSKGGLAVCISACGDNAISADKSALTQ---------TFIQAMQ-DAPKLTYGSLLDAMR 252
           KG+ GG A+ IS C D+  SAD SAL++          FIQA++  A   TYGSLL++MR
Sbjct: 253 KGTAGGEAISISGCDDDQTSADTSALSKITSTGAMTFCFIQAIERSAQGTTYGSLLNSMR 312

Query: 253 STIYSA-------------------KAGKFVRDILQQYAHEPQLSSSEKFNIHSK 288
           +TI +                      G  +  + Q    EPQL++ + F++++K
Sbjct: 313 TTIRNTGNDGGGSGGVVTTVLSMLLTGGSAIGGLRQ----EPQLTACQTFDVYAK 363


>AT5G64240.2 | Symbols: AtMC3, MC3 | metacaspase 3 |
           chr5:25695836-25697249 FORWARD LENGTH=362
          Length = 362

 Score =  240 bits (613), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 134/279 (48%), Positives = 184/279 (65%), Gaps = 15/279 (5%)

Query: 25  YGHKRAVLFGINYGNTAAPRLKGSVNNAQCMKDFLINKLGFPGDSIWMFTDDSEEKTAIP 84
           +G KRAVL G+NY   +   LKG +++A+ M+  L+ ++GFP DSI M T+D      IP
Sbjct: 87  FGKKRAVLCGVNYKGKSYS-LKGCISDAKSMRSLLVQQMGFPIDSILMLTEDEASPQRIP 145

Query: 85  TKHNMRVAMKWLVEDCQAGDSLVFYFSGQVARVKDHNGDELDGCDEAICPVDYEDEGKIR 144
           TK N+R AM+WLVE  +A DSLVF+FSG  ++  D+NGDE+DG DEA+CP+D+E EGKI 
Sbjct: 146 TKRNIRKAMRWLVEGNRARDSLVFHFSGHGSQQNDYNGDEIDGQDEALCPLDHETEGKII 205

Query: 145 DDEINTAIVRPLPHGAKLHALVDASFSGTILDLQFVYTKMNWIGYWGWKDHRPRRGDFKG 204
           DDEIN  +VRPL HGAKLHA++DA  SGT+LDL F+  +M   G + W+DHR  R  +KG
Sbjct: 206 DDEINRILVRPLVHGAKLHAVIDACNSGTVLDLPFI-CRMERNGSYEWEDHRSVRA-YKG 263

Query: 205 SKGGLAVCISACGDNAISA--------DKSALTQTFIQAMQDA-PKLTYGSLLDAMRSTI 255
           + GG A C SAC D+  S         +  A+T +FI+A++ A P  TYG LL+ M S I
Sbjct: 264 TDGGAAFCFSACDDDESSGYTPVFTGKNTGAMTYSFIKAVKTAGPAPTYGHLLNLMCSAI 323

Query: 256 YSAKAG-KFVRDILQQYAH-EPQLSSSEKFNIH-SKLIL 291
             A++   F  D     A  EP L+SSE+F+++ +K +L
Sbjct: 324 REAQSRLAFNGDYTSSDASAEPLLTSSEEFDVYATKFVL 362


>AT4G25110.1 | Symbols: AtMC2, MC2 | metacaspase 2 |
           chr4:12887738-12889953 REVERSE LENGTH=418
          Length = 418

 Score =  230 bits (586), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 124/304 (40%), Positives = 174/304 (57%), Gaps = 42/304 (13%)

Query: 25  YGHKRAVLFGINYGNTAAPRLKGSVNNAQCMKDFLINKLGFPGDSIWMFTDDSEEKTAIP 84
           +G KRAV+ G++Y NT    LKG +N+A CMK  L+ +  FP   I M T++  +    P
Sbjct: 113 HGQKRAVIVGVSYKNTKD-ELKGCINDANCMKFMLMKRFQFPESCILMLTEEEADPMRWP 171

Query: 85  TKHNMRVAMKWLVEDCQAGDSLVFYFSGQVARVKDHNGDELDGCDEAICPVDYEDEGKIR 144
           TK+N+ +AM WLV  C+ GDSLVF+FSG      D NGDE+DG DE + PVD+   G I 
Sbjct: 172 TKNNITMAMHWLVLSCKPGDSLVFHFSGHGNNQMDDNGDEVDGFDETLLPVDHRTSGVIV 231

Query: 145 DDEINTAIVRPLPHGAKLHALVDASFSGTILDLQFVYTKMNWIGYWGWKDHRPRRGDFKG 204
           DDEIN  IVRPLP+G KLHA+VDA  SGT++DL ++  +M+ +G + W+DHRP+ G +KG
Sbjct: 232 DDEINATIVRPLPYGVKLHAIVDACHSGTVMDLPYL-CRMDRLGNYEWEDHRPKTGMWKG 290

Query: 205 SKGGLAVCISACGDNAISADKS---------ALTQTFIQAMQDAPKLTYGSLLDAMRSTI 255
           + GG     + C D+  SAD           A+T  FIQA++    +TYGSLL+AMRST+
Sbjct: 291 TSGGEVFSFTGCDDDQTSADTPQLSGSAWTGAMTYAFIQAIERGHGMTYGSLLNAMRSTV 350

Query: 256 YSAKAGKFVRDILQ-------------------------------QYAHEPQLSSSEKFN 284
           +        R++++                               Q   EPQLS++E F 
Sbjct: 351 HEIFDKNKGRELVEVGGADFLSTLLGLLILGASPPDEEEEVNQAPQKTQEPQLSANEAFA 410

Query: 285 IHSK 288
           ++ K
Sbjct: 411 VYEK 414


>AT4G25110.2 | Symbols: AtMC2, MC2 | metacaspase 2 |
           chr4:12887738-12889953 REVERSE LENGTH=417
          Length = 417

 Score =  226 bits (576), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 124/304 (40%), Positives = 175/304 (57%), Gaps = 43/304 (14%)

Query: 25  YGHKRAVLFGINYGNTAAPRLKGSVNNAQCMKDFLINKLGFPGDSIWMFTDDSEEKTAIP 84
           +G KRAV+ G++Y NT    LKG +N+A CMK  L+ +  FP   I M T++++     P
Sbjct: 113 HGQKRAVIVGVSYKNTKD-ELKGCINDANCMKFMLMKRFQFPESCILMLTEEAD-PMRWP 170

Query: 85  TKHNMRVAMKWLVEDCQAGDSLVFYFSGQVARVKDHNGDELDGCDEAICPVDYEDEGKIR 144
           TK+N+ +AM WLV  C+ GDSLVF+FSG      D NGDE+DG DE + PVD+   G I 
Sbjct: 171 TKNNITMAMHWLVLSCKPGDSLVFHFSGHGNNQMDDNGDEVDGFDETLLPVDHRTSGVIV 230

Query: 145 DDEINTAIVRPLPHGAKLHALVDASFSGTILDLQFVYTKMNWIGYWGWKDHRPRRGDFKG 204
           DDEIN  IVRPLP+G KLHA+VDA  SGT++DL ++  +M+ +G + W+DHRP+ G +KG
Sbjct: 231 DDEINATIVRPLPYGVKLHAIVDACHSGTVMDLPYL-CRMDRLGNYEWEDHRPKTGMWKG 289

Query: 205 SKGGLAVCISACGDNAISADKS---------ALTQTFIQAMQDAPKLTYGSLLDAMRSTI 255
           + GG     + C D+  SAD           A+T  FIQA++    +TYGSLL+AMRST+
Sbjct: 290 TSGGEVFSFTGCDDDQTSADTPQLSGSAWTGAMTYAFIQAIERGHGMTYGSLLNAMRSTV 349

Query: 256 YSAKAGKFVRDILQ-------------------------------QYAHEPQLSSSEKFN 284
           +        R++++                               Q   EPQLS++E F 
Sbjct: 350 HEIFDKNKGRELVEVGGADFLSTLLGLLILGASPPDEEEEVNQAPQKTQEPQLSANEAFA 409

Query: 285 IHSK 288
           ++ K
Sbjct: 410 VYEK 413


>AT5G64240.1 | Symbols: AtMC3, MC3 | metacaspase 3 |
           chr5:25695836-25696923 FORWARD LENGTH=305
          Length = 305

 Score =  213 bits (542), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 112/223 (50%), Positives = 147/223 (65%), Gaps = 5/223 (2%)

Query: 25  YGHKRAVLFGINYGNTAAPRLKGSVNNAQCMKDFLINKLGFPGDSIWMFTDDSEEKTAIP 84
           +G KRAVL G+NY   +   LKG +++A+ M+  L+ ++GFP DSI M T+D      IP
Sbjct: 87  FGKKRAVLCGVNYKGKSYS-LKGCISDAKSMRSLLVQQMGFPIDSILMLTEDEASPQRIP 145

Query: 85  TKHNMRVAMKWLVEDCQAGDSLVFYFSGQVARVKDHNGDELDGCDEAICPVDYEDEGKIR 144
           TK N+R AM+WLVE  +A DSLVF+FSG  ++  D+NGDE+DG DEA+CP+D+E EGKI 
Sbjct: 146 TKRNIRKAMRWLVEGNRARDSLVFHFSGHGSQQNDYNGDEIDGQDEALCPLDHETEGKII 205

Query: 145 DDEINTAIVRPLPHGAKLHALVDASFSGTILDLQFVYTKMNWIGYWGWKDHRPRRGDFKG 204
           DDEIN  +VRPL HGAKLHA++DA  SGT+LDL F+  +M   G + W+DHR  R  +KG
Sbjct: 206 DDEINRILVRPLVHGAKLHAVIDACNSGTVLDLPFI-CRMERNGSYEWEDHRSVRA-YKG 263

Query: 205 SKGGLAVCISACGDNAISADKSALTQTFIQAMQDAPKLTYGSL 247
           + GG A C SAC D+  S          I     A K TY S+
Sbjct: 264 TDGGAAFCFSACDDDESSGYTPVCFHYIIH--HHATKHTYLSV 304


>AT1G79340.1 | Symbols: AtMC4, MC4 | metacaspase 4 |
           chr1:29842849-29844368 FORWARD LENGTH=418
          Length = 418

 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/150 (36%), Positives = 83/150 (55%), Gaps = 7/150 (4%)

Query: 28  KRAVLFGINYGNTAAPRLKGSVNNAQCMKDFLINKLGFPGDSIWMFTDDSEEKTAIPTKH 87
           K+AVL GINY  T A  L+G VN+ + M   L+ + GF  ++I +  D ++E +  PT  
Sbjct: 3   KKAVLIGINYPGTKA-ELRGCVNDVRRMYKCLVERYGFSEENITVLID-TDESSTQPTGK 60

Query: 88  NMRVAMKWLVEDCQAGDSLVFYFSGQVARVKDHNGDELD-GCDEAICPVDYEDEGKIRDD 146
           N+R A+  LVE   +GD LV ++SG   R+    G++ D G DE I P D      I DD
Sbjct: 61  NIRRALADLVESADSGDVLVVHYSGHGTRLPAETGEDDDTGFDECIVPCDMN---LITDD 117

Query: 147 EINTAIVRPLPHGAKLHALVDASFSGTILD 176
           +    +V  +P G ++  + D+  SG ++D
Sbjct: 118 DFRD-LVDKVPPGCRMTIISDSCHSGGLID 146


>AT1G79310.1 | Symbols: AtMC7, MC7 | metacaspase 7 |
           chr1:29833986-29835412 FORWARD LENGTH=403
          Length = 403

 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 79/150 (52%), Gaps = 7/150 (4%)

Query: 28  KRAVLFGINYGNTAAPRLKGSVNNAQCMKDFLINKLGFPGDSIWMFTDDSEEKTAIPTKH 87
           KRA+L GINY  T    L+G VN+   M   L+++ GF  + I +  D  E  T  PT  
Sbjct: 3   KRALLIGINYPGTTE-ELQGCVNDVHRMHKCLVDRFGFAEEDITVLIDTDESYTQ-PTGK 60

Query: 88  NMRVAMKWLVEDCQAGDSLVFYFSGQVARVKDHNGDELD-GCDEAICPVDYEDEGKIRDD 146
           N+R A+  L++  ++GD L  ++SG   RV    G+E D G DE I P D      I DD
Sbjct: 61  NIRQALSELIKPAKSGDVLFVHYSGHGTRVPPETGEEDDTGFDECIVPSDL---NPIPDD 117

Query: 147 EINTAIVRPLPHGAKLHALVDASFSGTILD 176
           +    +V  +P G ++  + D+  SG ++D
Sbjct: 118 DFRD-LVEQVPEGCQITIVSDSCHSGGLID 146


>AT1G79330.1 | Symbols: AMC6, ATMCP2B, ATMC5, MC5 | metacaspase 5 |
           chr1:29838722-29840137 FORWARD LENGTH=410
          Length = 410

 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 79/150 (52%), Gaps = 7/150 (4%)

Query: 28  KRAVLFGINYGNTAAPRLKGSVNNAQCMKDFLINKLGFPGDSIWMFTDDSEEKTAIPTKH 87
           K+AVL GINY  T A  L+G VN+ + +   L+++ GF   +I    D  E  T  PT  
Sbjct: 3   KKAVLIGINYPGTKA-ELRGCVNDVRRVHKSLVDRFGFSERNITELIDTDESSTK-PTGK 60

Query: 88  NMRVAMKWLVEDCQAGDSLVFYFSGQVARVKDHNGDELD-GCDEAICPVDYEDEGKIRDD 146
           N+R A+  LVE  + GD LV ++SG   R+    G++ D G DE I P D      I DD
Sbjct: 61  NIRRALLNLVESAKPGDVLVVHYSGHGTRLPAETGEDDDTGYDECIVPCDM---NLITDD 117

Query: 147 EINTAIVRPLPHGAKLHALVDASFSGTILD 176
           E    +V  +P  A +  + D+  SG ++D
Sbjct: 118 EFRD-LVEKVPKEAHITIISDSCHSGGLID 146


>AT5G04200.1 | Symbols: AtMC9, MC9 | metacaspase 9 |
           chr5:1153893-1154870 FORWARD LENGTH=325
          Length = 325

 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 77/151 (50%), Gaps = 8/151 (5%)

Query: 28  KRAVLFGINYGNTAAPRLKGSVNNAQCMKDFLINKLGFPGDSIWMFTDDSEEKTAIPTKH 87
           + AVL G NY NT    L G +N+   MK+ ++++ GF  D I + TD+ E K   PT  
Sbjct: 10  RLAVLVGCNYPNTRN-ELHGCINDVLAMKETILSRFGFKQDDIEVLTDEPESKVK-PTGA 67

Query: 88  NMRVAMKWLVEDCQA--GDSLVFYFSGQVARVKDHNGDELDGCDEAICPVDYEDEGKIRD 145
           N++ A++ +V+  QA  GD L F++SG   R+           DEAI P D+     I D
Sbjct: 68  NIKAALRRMVDKAQAGSGDILFFHYSGHGTRIPSVKSAHPFKQDEAIVPCDFN---LITD 124

Query: 146 DEINTAIVRPLPHGAKLHALVDASFSGTILD 176
            +    +V  LP G     + D+  SG ++D
Sbjct: 125 VDFR-ELVNQLPKGTSFTMISDSCHSGGLID 154


>AT1G79320.1 | Symbols: AtMC6, MC6 | metacaspase 6 |
           chr1:29836686-29837908 FORWARD LENGTH=368
          Length = 368

 Score = 74.3 bits (181), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 81/150 (54%), Gaps = 7/150 (4%)

Query: 28  KRAVLFGINYGNTAAPRLKGSVNNAQCMKDFLINKLGFPGDSIWMFTDDSEEKTAIPTKH 87
           K+A+L GINY  T A  L+G VN+ + M+  L+ + GF  ++I M  D ++  +  PT  
Sbjct: 3   KKALLIGINYVGTKA-ELRGCVNDVRRMRISLVERYGFSEENIKMLID-TDSSSIKPTGK 60

Query: 88  NMRVAMKWLVEDCQAGDSLVFYFSGQVARVKDHNGDELD-GCDEAICPVDYEDEGKIRDD 146
           N+R A+  LVE  ++GD L  ++SG   R+    G++ D G DE I P D      I DD
Sbjct: 61  NIRQALLDLVEPAKSGDVLFVHYSGHGTRLPAETGEDDDTGYDECIVPSDM---NLITDD 117

Query: 147 EINTAIVRPLPHGAKLHALVDASFSGTILD 176
           +    +V  +P    +  + D+  SG ++D
Sbjct: 118 DFRD-LVDMVPKDCPITIISDSCHSGGLID 146


>AT1G16420.1 | Symbols: ATMC8, MC8 | metacaspase 8 |
           chr1:5612304-5613829 REVERSE LENGTH=381
          Length = 381

 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 8/150 (5%)

Query: 28  KRAVLFGINYGNTAAPRLKGSVNNAQCMKDFLINKLGFPGDSIWMFTDDSEEKTAIPTKH 87
           K+A+L GINY  TA   L+G VN+   M+  LI   GF    I +  D +++    PT  
Sbjct: 3   KKALLIGINYPGTAV-ELRGCVNDVHRMQKCLIELYGFANKDIVIMID-TDKSCIQPTGK 60

Query: 88  NMRVAMKWLVEDCQAGDSLVFYFSGQVARVKDHNGDELD--GCDEAICPVDYEDEGKIRD 145
           N+   +  L+   Q+GD LVF++SG   R+     D  D  G DE I P D      I+D
Sbjct: 61  NICDELDNLIASGQSGDFLVFHYSGHGTRIPPGIEDSEDPTGFDECITPCDM---NLIKD 117

Query: 146 DEINTAIVRPLPHGAKLHALVDASFSGTIL 175
            +    + R +  G +L  + D+  SG ++
Sbjct: 118 QQFREMVSR-VKEGCQLTIISDSCHSGGLI 146