Miyakogusa Predicted Gene

Lj6g3v2205890.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2205890.1 Non Chatacterized Hit- tr|I1KUF6|I1KUF6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.21796
PE,84.57,0,PS_Dcarbxylase,Phosphatidylserine decarboxylase-related;
PHOSPHATIDYLSERINE DECARBOXYLASE,NULL; PHOS,CUFF.60853.1
         (180 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G57190.1 | Symbols: PSD2 | phosphatidylserine decarboxylase 2...   248   1e-66
AT4G25970.1 | Symbols: PSD3 | phosphatidylserine decarboxylase 3...   244   2e-65

>AT5G57190.1 | Symbols: PSD2 | phosphatidylserine decarboxylase 2 |
           chr5:23171531-23175364 REVERSE LENGTH=635
          Length = 635

 Score =  248 bits (633), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 113/161 (70%), Positives = 137/161 (85%), Gaps = 1/161 (0%)

Query: 2   GVKELLQNISEKQGARMDSPESAADIPNFIESFKDQLNLAECKYPLEHFKTFNEFFIREL 61
           G KE+LQ +SEKQG +M S ESA  IP F+E FKDQ+N+AE KYPL+HFKTFNEFFIREL
Sbjct: 363 GAKEILQRLSEKQGKKMSSVESAQKIPRFLEFFKDQINMAEVKYPLQHFKTFNEFFIREL 422

Query: 62  KPGSRPIAFAERDDIAVCAADCRLTAFKSVDDSTRFWIKGQKFSLQGLLGKEVLSSSAFV 121
           KPG+RPIA   R+D+AVCAADCRL AF+SV+DSTRFWIKG+KFS++GLLGK V + +AF+
Sbjct: 423 KPGARPIACMNRNDVAVCAADCRLMAFQSVEDSTRFWIKGKKFSIRGLLGKNV-NPNAFL 481

Query: 122 DGTMVIFRLAPQDYHRFHVPVSGIIEQFVDIPDAYIQSIPL 162
           DG++VIFRLAPQDYHRFHVPVSG+IEQFVD+  +     P+
Sbjct: 482 DGSLVIFRLAPQDYHRFHVPVSGVIEQFVDVSGSLYTVNPI 522


>AT4G25970.1 | Symbols: PSD3 | phosphatidylserine decarboxylase 3 |
           chr4:13184240-13189139 FORWARD LENGTH=635
          Length = 635

 Score =  244 bits (623), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 110/161 (68%), Positives = 139/161 (86%), Gaps = 1/161 (0%)

Query: 2   GVKELLQNISEKQGARMDSPESAADIPNFIESFKDQLNLAECKYPLEHFKTFNEFFIREL 61
           G KE+LQN+SEKQG +M+S ESA +IP+F+E FKDQ+N+AE KYPL+HFKTFNEFF+REL
Sbjct: 362 GAKEILQNLSEKQGKKMNSVESAQNIPSFLEFFKDQINMAEVKYPLDHFKTFNEFFVREL 421

Query: 62  KPGSRPIAFAERDDIAVCAADCRLTAFKSVDDSTRFWIKGQKFSLQGLLGKEVLSSSAFV 121
           KPG+RPIA  ++DD+AV AADCRL AF+SVDDSTRFWIKG+KFS++GLLG +V  S AF+
Sbjct: 422 KPGARPIACMDQDDVAVSAADCRLMAFQSVDDSTRFWIKGRKFSIKGLLGNDV-QSDAFL 480

Query: 122 DGTMVIFRLAPQDYHRFHVPVSGIIEQFVDIPDAYIQSIPL 162
           DG++VIFRLAPQDYHRFH PVSG+IE+FV++  +     P+
Sbjct: 481 DGSLVIFRLAPQDYHRFHSPVSGVIEKFVNVSGSLYTVNPI 521