Miyakogusa Predicted Gene

Lj6g3v2203730.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2203730.1 Non Chatacterized Hit- tr|I1MDY7|I1MDY7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.4647
PE=,82.99,0,RibA,GTP cyclohydrolase II, RibA;
RibB,3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB;
RibBA,Ri,CUFF.60799.1
         (528 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G64300.1 | Symbols: ATGCH, GCH, ATRIBA1, RFD1 | GTP cyclohydr...   759   0.0  
AT2G22450.1 | Symbols:  | riboflavin biosynthesis protein, putat...   588   e-168
AT5G59750.1 | Symbols:  | DHBP synthase RibB-like alpha/beta dom...   567   e-162
AT5G59750.2 | Symbols:  | DHBP synthase RibB-like alpha/beta dom...   550   e-157

>AT5G64300.1 | Symbols: ATGCH, GCH, ATRIBA1, RFD1 | GTP
           cyclohydrolase II | chr5:25718459-25720790 FORWARD
           LENGTH=543
          Length = 543

 Score =  759 bits (1960), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/497 (75%), Positives = 426/497 (85%), Gaps = 10/497 (2%)

Query: 29  VRLNCKFPLSDNVVY----RTKATLVSAGGGLVSHPDTNNVVIAKNLPGD---ESVGFED 81
           V L    PLS   +     + KA ++S    L+S  + N  +   +L  D   E +  + 
Sbjct: 35  VTLPSNHPLSTFSIKTNTGKVKAAVISREDDLLSFTNGNTPLSNGSLIDDRTEEPLEADS 94

Query: 82  QPNGTLAEDTG---LTGNVSDEEHDDLNSPTPGFASIPEAIEDIRQGKMVLVVDDEDREN 138
              GTLA D+      G V++++  +L+ PTPGF+SIPEAIEDIRQGK+V+VVDDEDREN
Sbjct: 95  VSLGTLAADSAPAPANGFVAEDDDFELDLPTPGFSSIPEAIEDIRQGKLVVVVDDEDREN 154

Query: 139 EGDLIMAAQLATPQAMAFIVKYGTGIVCVSMKEEDLDRLELPLMVDSKANAEKLSTAFTV 198
           EGDL+MAAQLATP+AMAFIV++GTGIVCVSMKE+DL+RL LPLMV+ K N EKLSTAFTV
Sbjct: 155 EGDLVMAAQLATPEAMAFIVRHGTGIVCVSMKEDDLERLHLPLMVNQKENEEKLSTAFTV 214

Query: 199 TVDAKHGTTTGVSAQDRATTVLALASRDSTPGDFNRPGHIFPLKYREGGVLKRAGHTEAS 258
           TVDAKHGTTTGVSA+DRATT+L+LASRDS P DFNRPGHIFPLKYREGGVLKRAGHTEAS
Sbjct: 215 TVDAKHGTTTGVSARDRATTILSLASRDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEAS 274

Query: 259 VDLAMLAGLDPVAVLCEVVDDDGSMARLPKLRQFAELENLKIVSIADLIRYRRKRDKLVD 318
           VDL +LAGLDPV VLCE+VDDDGSMARLPKLR+FA   NLK+VSIADLIRYRRKRDKLV+
Sbjct: 275 VDLTVLAGLDPVGVLCEIVDDDGSMARLPKLREFAAENNLKVVSIADLIRYRRKRDKLVE 334

Query: 319 RSSAARIPTMWGPFTAYCYKSLIDGMEHIAMVKGDIGDGQDVLVRVHSECLTGDIFGSAR 378
           R+SAARIPTMWGPFTAYCY+S++DG+EHIAMVKG+IGDGQD+LVRVHSECLTGDIFGSAR
Sbjct: 335 RASAARIPTMWGPFTAYCYRSILDGIEHIAMVKGEIGDGQDILVRVHSECLTGDIFGSAR 394

Query: 379 CDCGGQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGL 438
           CDCG QLAL+MQQIEA GRGVLVYLRGHEGRGIGLGHKLRAYNLQD GRDTVEANEELGL
Sbjct: 395 CDCGNQLALSMQQIEATGRGVLVYLRGHEGRGIGLGHKLRAYNLQDAGRDTVEANEELGL 454

Query: 439 PVDSREYGIGAQILRDLGVRSMKLMTNNPSKYGGLKGYGLTVSGRIPLLTLITSENKRYL 498
           PVDSREYGIGAQI+RDLGVR+MKLMTNNP+KY GLKGYGL + GR+PLL+LIT ENKRYL
Sbjct: 455 PVDSREYGIGAQIIRDLGVRTMKLMTNNPAKYVGLKGYGLAIVGRVPLLSLITKENKRYL 514

Query: 499 ETKRVKMGHVYGKEFNG 515
           ETKR KMGH+YG +F G
Sbjct: 515 ETKRTKMGHMYGLKFKG 531


>AT2G22450.1 | Symbols:  | riboflavin biosynthesis protein, putative
           | chr2:9530654-9532691 FORWARD LENGTH=476
          Length = 476

 Score =  588 bits (1515), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 294/420 (70%), Positives = 346/420 (82%), Gaps = 17/420 (4%)

Query: 77  VGFEDQPN----GTLAED----TGLTGNVSDEEHDDLNSPTPGFASIPEAIEDIRQGKMV 128
           +G E QP+    GTLA +    T  +  V DEE D L+ PT GFASIP+AIEDIR GKMV
Sbjct: 64  MGIELQPDLVSFGTLAAEMIPTTMDSPEVEDEEFD-LDRPTDGFASIPQAIEDIRHGKMV 122

Query: 129 LVVDDEDRENEGDLIMAAQLATPQAMAFIVKYGTGIVCVSMKEEDLDRLELPLMVDSKAN 188
           +VVDDEDRENEGDLIMAA LATP+AMAF+VK+GTGIVCVSMK EDL+RLELPLMV  K N
Sbjct: 123 VVVDDEDRENEGDLIMAASLATPEAMAFVVKHGTGIVCVSMKGEDLERLELPLMVTRKDN 182

Query: 189 AEKLSTAFTVTVDAKHGTTTGVSAQDRATTVLALASRDSTPGDFNRPGHIFPLKYREGGV 248
            EKL TAFTV+VDAK GT+TGVSA+DRA T+L LAS+DS P DFNRPGHIFPL+YREGGV
Sbjct: 183 EEKLRTAFTVSVDAKKGTSTGVSARDRAQTILTLASKDSKPEDFNRPGHIFPLRYREGGV 242

Query: 249 LKRAGHTEASVDLAMLAGLDPVAVLCEVVDDDGSMARLPKLRQFAELENLKIVSIADLIR 308
           LKRAGHTEASVDL +LAGL+PV+VLCE+VDDDGSMARLP+LRQFA+  NLK++SIADLIR
Sbjct: 243 LKRAGHTEASVDLTVLAGLEPVSVLCEIVDDDGSMARLPRLRQFAQENNLKLISIADLIR 302

Query: 309 YRRKRDKLVDRSSAARIPTMWGPFTAYCYKSLIDGMEHIAMVKGDIGDGQDVLVRVHSEC 368
           YRRKR++LV+ ++ A IPTMWGPF A+C+KSL+DG+EHIAMVKG+IGDG+D+LVRVH+EC
Sbjct: 303 YRRKRERLVEFTAVAPIPTMWGPFKAHCFKSLLDGVEHIAMVKGEIGDGKDILVRVHAEC 362

Query: 369 LTGDIFGSARCDCGGQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRD 428
           +T DIFG++    G QLA+AM+ IE  GRGV VYLRG E +GI L HK R YN   D   
Sbjct: 363 ITDDIFGNS--SGGKQLAIAMRLIEENGRGVFVYLRGPESKGIDLSHKPRTYNTNSD--- 417

Query: 429 TVEANEELGLPVDSREYGIGAQILRDLGVRSMKLMTNNPSKYGGLKGYGLTVSGRIPLLT 488
                E +  PV SREYGIGAQILRDLGVR MK+MTNNP+ Y GLKGYGL++SG++PL+T
Sbjct: 418 ---QAEGVSFPVASREYGIGAQILRDLGVREMKVMTNNPAHYVGLKGYGLSISGKVPLIT 474


>AT5G59750.1 | Symbols:  | DHBP synthase RibB-like alpha/beta
           domain;GTP cyclohydrolase II | chr5:24073397-24075411
           FORWARD LENGTH=509
          Length = 509

 Score =  567 bits (1462), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 272/419 (64%), Positives = 344/419 (82%), Gaps = 2/419 (0%)

Query: 97  VSDEEHDDLNSPTPGFASIPEAIEDIRQGKMVLVVDDEDRENEGDLIMAAQLATPQAMAF 156
           VSD E D  + PT G++SI  A++ +R+GK V+VVDDE  + EG+LIMAA L +P+ +AF
Sbjct: 87  VSDAEGDP-DCPTQGYSSIELALQALRKGKFVIVVDDETGDVEGNLIMAATLTSPKDIAF 145

Query: 157 IVKYGTGIVCVSMKEEDLDRLELPLMVDSKANAEKLSTAFTVTVDAKHGTTTGVSAQDRA 216
           ++K G+GIV V MK+E+L+RL L LM     + +  +  FT+TVDAK GT+TGVSA DRA
Sbjct: 146 LIKNGSGIVSVGMKKENLERLSLTLMSPEMEDEDSSAPTFTITVDAKSGTSTGVSASDRA 205

Query: 217 TTVLALASRDSTPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAMLAGLDPVAVLCEV 276
            TVLAL+S D+ P DF RPGH+FPLKYR+GGVL+RAGHTEASVDL +LAGL P++VL  +
Sbjct: 206 MTVLALSSLDAKPDDFRRPGHVFPLKYRDGGVLRRAGHTEASVDLMILAGLRPLSVLSAI 265

Query: 277 VD-DDGSMARLPKLRQFAELENLKIVSIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAY 335
           +D +DGSMA LP +++ A   ++ IVS+ DLIRYRRKRDKLV+R + +R+PT WG F AY
Sbjct: 266 LDQEDGSMASLPYMKKLATEHDIPIVSLTDLIRYRRKRDKLVERITVSRLPTKWGLFQAY 325

Query: 336 CYKSLIDGMEHIAMVKGDIGDGQDVLVRVHSECLTGDIFGSARCDCGGQLALAMQQIEAA 395
           CY+S +DG E+IA+VKG++G+G+D+LVRVHSECLTGDIFGSARCDCG QL LAM+ IE  
Sbjct: 326 CYRSKLDGTENIALVKGNVGNGEDILVRVHSECLTGDIFGSARCDCGNQLDLAMELIEKE 385

Query: 396 GRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQILRDL 455
           GRGV+VYLRGHEGRGIGLGHKLRAYNLQD+G DTV+AN ELGL +DSREYGIGAQ+LRD+
Sbjct: 386 GRGVVVYLRGHEGRGIGLGHKLRAYNLQDEGHDTVQANVELGLSIDSREYGIGAQMLRDI 445

Query: 456 GVRSMKLMTNNPSKYGGLKGYGLTVSGRIPLLTLITSENKRYLETKRVKMGHVYGKEFN 514
           GVR+M+LMTNNP+K+ GLKGYGL V GR+P++T IT EN+RY+ETKR KMGH+Y  + N
Sbjct: 446 GVRTMRLMTNNPAKFTGLKGYGLAVVGRVPVVTPITKENRRYMETKRKKMGHIYISDNN 504


>AT5G59750.2 | Symbols:  | DHBP synthase RibB-like alpha/beta
           domain;GTP cyclohydrolase II | chr5:24073397-24075411
           FORWARD LENGTH=543
          Length = 543

 Score =  550 bits (1418), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 272/453 (60%), Positives = 345/453 (76%), Gaps = 36/453 (7%)

Query: 97  VSDEEHDDLNSPTPGFASIPEAIEDIRQGKM----------------------------- 127
           VSD E D  + PT G++SI  A++ +R+GK+                             
Sbjct: 87  VSDAEGDP-DCPTQGYSSIELALQALRKGKVCSLTIFLKTSDYDDLFLQLYRFGLTKKLS 145

Query: 128 -----VLVVDDEDRENEGDLIMAAQLATPQAMAFIVKYGTGIVCVSMKEEDLDRLELPLM 182
                V+VVDDE  + EG+LIMAA L +P+ +AF++K G+GIV V MK+E+L+RL L LM
Sbjct: 146 LMFQFVIVVDDETGDVEGNLIMAATLTSPKDIAFLIKNGSGIVSVGMKKENLERLSLTLM 205

Query: 183 VDSKANAEKLSTAFTVTVDAKHGTTTGVSAQDRATTVLALASRDSTPGDFNRPGHIFPLK 242
                + +  +  FT+TVDAK GT+TGVSA DRA TVLAL+S D+ P DF RPGH+FPLK
Sbjct: 206 SPEMEDEDSSAPTFTITVDAKSGTSTGVSASDRAMTVLALSSLDAKPDDFRRPGHVFPLK 265

Query: 243 YREGGVLKRAGHTEASVDLAMLAGLDPVAVLCEVVD-DDGSMARLPKLRQFAELENLKIV 301
           YR+GGVL+RAGHTEASVDL +LAGL P++VL  ++D +DGSMA LP +++ A   ++ IV
Sbjct: 266 YRDGGVLRRAGHTEASVDLMILAGLRPLSVLSAILDQEDGSMASLPYMKKLATEHDIPIV 325

Query: 302 SIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYKSLIDGMEHIAMVKGDIGDGQDVL 361
           S+ DLIRYRRKRDKLV+R + +R+PT WG F AYCY+S +DG E+IA+VKG++G+G+D+L
Sbjct: 326 SLTDLIRYRRKRDKLVERITVSRLPTKWGLFQAYCYRSKLDGTENIALVKGNVGNGEDIL 385

Query: 362 VRVHSECLTGDIFGSARCDCGGQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYN 421
           VRVHSECLTGDIFGSARCDCG QL LAM+ IE  GRGV+VYLRGHEGRGIGLGHKLRAYN
Sbjct: 386 VRVHSECLTGDIFGSARCDCGNQLDLAMELIEKEGRGVVVYLRGHEGRGIGLGHKLRAYN 445

Query: 422 LQDDGRDTVEANEELGLPVDSREYGIGAQILRDLGVRSMKLMTNNPSKYGGLKGYGLTVS 481
           LQD+G DTV+AN ELGL +DSREYGIGAQ+LRD+GVR+M+LMTNNP+K+ GLKGYGL V 
Sbjct: 446 LQDEGHDTVQANVELGLSIDSREYGIGAQMLRDIGVRTMRLMTNNPAKFTGLKGYGLAVV 505

Query: 482 GRIPLLTLITSENKRYLETKRVKMGHVYGKEFN 514
           GR+P++T IT EN+RY+ETKR KMGH+Y  + N
Sbjct: 506 GRVPVVTPITKENRRYMETKRKKMGHIYISDNN 538