Miyakogusa Predicted Gene
- Lj6g3v2193640.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v2193640.1 Non Chatacterized Hit- tr|I3RZT1|I3RZT1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.42,0,seg,NULL;
PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING PROTEIN,NULL; FAMILY NOT
NAMED,NULL; PPR,Pentatr,CUFF.60791.1
(399 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 449 e-126
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 4e-55
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 6e-50
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 2e-47
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 2e-47
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 2e-45
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 2e-45
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 6e-45
AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 3e-43
AT1G28020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 4e-34
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 2e-32
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 116 3e-26
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 116 3e-26
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 116 3e-26
AT3G11380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 9e-25
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 5e-19
AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 8e-19
AT1G28000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 74 2e-13
AT1G43010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT3G11350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 65 1e-10
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 63 3e-10
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 61 1e-09
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 4e-09
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 59 6e-09
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 59 7e-09
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 59 8e-09
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 8e-09
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 58 1e-08
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 58 1e-08
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 58 1e-08
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 2e-08
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 56 4e-08
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 5e-08
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 5e-08
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 8e-08
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 9e-08
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 9e-08
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 55 9e-08
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-07
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 54 2e-07
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 4e-07
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 4e-07
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 51 1e-06
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 51 2e-06
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 50 2e-06
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 2e-06
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 3e-06
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 50 3e-06
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 50 3e-06
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 49 4e-06
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 4e-06
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 5e-06
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 5e-06
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 49 6e-06
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 8e-06
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 8e-06
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 48 1e-05
>AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2941864-2943324 FORWARD
LENGTH=409
Length = 409
Score = 449 bits (1155), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/398 (54%), Positives = 294/398 (73%), Gaps = 9/398 (2%)
Query: 1 MAYRSLFLSLR---RNSGFISTNSHHHQSRCLLNRARFVSSGAVSTDFVEXXXXX---XX 54
MA RSLF SLR N+G + +N + +++ + + A+ VE
Sbjct: 1 MATRSLFHSLRCRLTNNGVLGSNFIRNAESSRFSKS-YNADAAIGNSLVEESEEKDDLKS 59
Query: 55 XXXXXXXPKRSATNILHKWVLEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEH 114
PKRSAT +L KW+ EGN +T++ELR+I+KELRR++RYKHALE++EWM+ HEE
Sbjct: 60 RIFRLRLPKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWMVQHEES 119
Query: 115 GLSDSDYAMRIDLMTKVFGIDAAERYFEALPVAAKTSETYTALLHSYAGAKMTEKAEELY 174
+SD+DYA RIDL++KVFGIDAAERYFE L + +KT+ETYT+LLH+YA +K TE+AE L+
Sbjct: 120 KISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTERAEALF 179
Query: 175 QRIKDSN-LSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAA 233
+RI +S+ L+F A+TYNEMMTLYMSVGQVEKVP V+E LKQ+ VSPDIFTYNLW+SSCAA
Sbjct: 180 KRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSSCAA 239
Query: 234 TLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASHLDNSSSNSLAETEKRITQSQW 293
T NIDE+R+IL+EM H A SNE W RY++L ++Y+ +S + N+ S E EK I+Q +W
Sbjct: 240 TFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQREW 299
Query: 294 ITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYLMLGHVKEVGEVIDQ 353
ITYDFL+IL+ GLG+K +DQIW SLR T Q + +R+Y C++S+YLMLGH++E E+I Q
Sbjct: 300 ITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLREAEEIIHQ 359
Query: 354 WKNS-TIDFDMLACKKIMDAFRATGLADIANNLNMILI 390
WK S T +FD AC +I++AFR GL IA+ ++IL+
Sbjct: 360 WKESKTTEFDASACLRILNAFRDVGLEGIASGFHLILV 397
>AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:1258581-1260265 FORWARD
LENGTH=532
Length = 532
Score = 212 bits (539), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 115/334 (34%), Positives = 192/334 (57%), Gaps = 3/334 (0%)
Query: 63 KRSATNILHKWVLEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDYA 122
KRSA + KW EG+SV EL I +ELR+ +RYKHALEI EWM+ E+ L DYA
Sbjct: 74 KRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQEDIKLQAGDYA 133
Query: 123 MRIDLMTKVFGIDAAERYFEALPVAAKTSETYTALLHSYAGAKMTEKAEELYQRIKDSNL 182
+ +DL++K+ G+++AE++FE +P + T+LLHSY K+++KAE L++++ +
Sbjct: 134 VHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGF 193
Query: 183 SFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRR 242
L YN M+++Y+S GQ EKVP +++ELK R SPDI TYNLW+++ A+ +++ +
Sbjct: 194 LKSCLPYNHMLSMYISRGQFEKVPVLIKELKIRT-SPDIVTYNLWLTAFASGNDVEGAEK 252
Query: 243 ILDEMSHGADSNESWTRYLNLANVYVTASHLDNSSSNSLAETEKRITQSQWITYDFLIIL 302
+ + N W Y L N+Y +++ + +L E EK +++ + Y LI L
Sbjct: 253 VYLKAKE-EKLNPDWVTYSVLTNLYAKTDNVEKARL-ALKEMEKLVSKKNRVAYASLISL 310
Query: 303 YAGLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYLMLGHVKEVGEVIDQWKNSTIDFD 362
+A LG KD ++ W ++ + +KM + Y +ISA + LG ++ + D+W++ + D
Sbjct: 311 HANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGD 370
Query: 363 MLACKKIMDAFRATGLADIANNLNMILIEKNINP 396
I+ + + ++EK INP
Sbjct: 371 ARIPNLILAEYMNRDEVLLGEKFYERIVEKGINP 404
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 194 bits (494), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 112/304 (36%), Positives = 171/304 (56%), Gaps = 6/304 (1%)
Query: 84 ELRDIAKELRRSQRYKHALEISEWMITHEEHGLSD--SDYAMRIDLMTKVFGIDAAERYF 141
E+ D K+LR Y AL++SE M EE G++ SD A+ +DL+ K I A E YF
Sbjct: 57 EVGDTIKKLRNRGLYYPALKLSEVM---EERGMNKTVSDQAIHLDLVAKAREITAGENYF 113
Query: 142 EALPVAAKTSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQ 201
LP +KT TY +LL+ Y +TEKAE L ++K+ N++ +++YN +MTLY G+
Sbjct: 114 VDLPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGE 173
Query: 202 VEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYL 261
EKVP++++ELK NV PD +TYN+W+ + AAT +I V R+++EM+ WT Y
Sbjct: 174 TEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYS 233
Query: 262 NLANVYVTASHLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRM 321
N+A++YV A L + +L E E + TQ + Y FLI LY LG ++ +IW SLR+
Sbjct: 234 NMASIYVDAG-LSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRL 292
Query: 322 TKQKMINRNYSCIISAYLMLGHVKEVGEVIDQWKNSTIDFDMLACKKIMDAFRATGLADI 381
K N Y +I + L + + +W+ + +D+ ++ A+ GL
Sbjct: 293 AIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQK 352
Query: 382 ANNL 385
AN L
Sbjct: 353 ANEL 356
>AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9693262-9694815 REVERSE
LENGTH=491
Length = 491
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 181/339 (53%), Gaps = 5/339 (1%)
Query: 62 PKRSATNILHKWVLEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDY 121
P+RS T++L + + G++V++SELR I+K L RS RY AL++ EWM ++ S D
Sbjct: 50 PRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWMENQKDIEFSVYDI 109
Query: 122 AMRIDLMTKVFGIDAAERYFEAL---PVAAKTSET-YTALLHSYAGAKMTEKAEELYQRI 177
A+R+DL+ K G+ E YFE L V+ + +++ Y LL +Y KM ++AE L +++
Sbjct: 110 ALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMVKEAEALMEKL 169
Query: 178 KDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNI 237
+NEMM LY + GQ EKV VV +K + ++ +YNLW+++C +
Sbjct: 170 NGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWMNACCEVSGV 229
Query: 238 DEVRRILDEMSHGADSNESWTRYLNLANVYVTASHLDNSSSNSLAETEKRITQSQWITYD 297
V + EM W+ LANVY+ S D + L + EK + +S + Y
Sbjct: 230 AAVETVYKEMVGDKSVEVGWSSLCTLANVYIK-SGFDEKARLVLEDAEKMLNRSNRLGYF 288
Query: 298 FLIILYAGLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYLMLGHVKEVGEVIDQWKNS 357
FLI LYA LG+K+ + ++W + ++ NY C++S+ + G ++E V +W+
Sbjct: 289 FLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAERVFSEWEAQ 348
Query: 358 TIDFDMLACKKIMDAFRATGLADIANNLNMILIEKNINP 396
++D+ ++ A+ G A +L+ ++E+ P
Sbjct: 349 CFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTP 387
>AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:408779-410433 FORWARD
LENGTH=524
Length = 524
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 186/339 (54%), Gaps = 2/339 (0%)
Query: 62 PKRSATNILHKWVLEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITH-EEHGLSDSD 120
P+ A ++L++W G +T EL + KELR+ +R ALE+ +WM E LS SD
Sbjct: 79 PELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNRGERFRLSASD 138
Query: 121 YAMRIDLMTKVFGIDAAERYFEALPVAAKTSETYTALLHSYAGAKMTEKAEELYQRIKDS 180
A+++DL+ KV GI AE +F LP K Y +LL++Y AK EKAE L ++D
Sbjct: 139 AAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEALLNTMRDK 198
Query: 181 NLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEV 240
+ L +N MMTLYM++ + +KV ++V E+KQ+++ DI++YN+W+SSC + +++++
Sbjct: 199 GYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCGSLGSVEKM 258
Query: 241 RRILDEMSHGADSNESWTRYLNLANVYVTASHLDNSSSNSLAETEKRITQSQWITYDFLI 300
+ +M +WT + +A +Y+ + + ++L + E RIT I Y +L+
Sbjct: 259 ELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEK-AEDALRKVEARITGRNRIPYHYLL 317
Query: 301 ILYAGLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYLMLGHVKEVGEVIDQWKNSTID 360
LY LG+K +L ++W+ + + N Y ++S+ + +G ++ +V ++W
Sbjct: 318 SLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEEWLPVKSS 377
Query: 361 FDMLACKKIMDAFRATGLADIANNLNMILIEKNINPGNN 399
+D +M+A+ + A L ++E P ++
Sbjct: 378 YDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSS 416
>AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11533257-11534817 REVERSE
LENGTH=492
Length = 492
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 174/321 (54%), Gaps = 1/321 (0%)
Query: 62 PKRSATNILHKWVLEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDY 121
PK S L WV G V+V+EL I +LRR +R+ HALE+S+WM S +++
Sbjct: 37 PKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHALEVSKWMNETGVCVFSPTEH 96
Query: 122 AMRIDLMTKVFGIDAAERYFEALPVAAKTSETYTALLHSYAGAKMTEKAEELYQRIKDSN 181
A+ +DL+ +V+G AE YFE L K +TY ALL+ Y + EK+ ++++K+
Sbjct: 97 AVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCYVRQQNVEKSLLHFEKMKEMG 156
Query: 182 LSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVR 241
+LTYN +M LY ++GQ EKVP V+EE+K+ NV+PD ++Y + I++ A +++ +
Sbjct: 157 FVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYRICINAFGAMYDLERIG 216
Query: 242 RILDEMSHGADSNESWTRYLNLANVYVTASHLDNSSSNSLAETEKRITQSQWITYDFLII 301
L +M D W Y A Y+ D + L +E R+ + Y+ LI
Sbjct: 217 GTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVE-LLKMSENRLEKKDGEGYNHLIT 275
Query: 302 LYAGLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYLMLGHVKEVGEVIDQWKNSTIDF 361
LYA LG K ++ ++W+ + ++ IN++Y ++ + + + + E EV+ +WK+S +
Sbjct: 276 LYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDALVEAEEVLTEWKSSGNCY 335
Query: 362 DMLACKKIMDAFRATGLADIA 382
D ++ + + + A
Sbjct: 336 DFRVPNTVIRGYIGKSMEEKA 356
>AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926110-8927722 FORWARD
LENGTH=490
Length = 490
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 185/365 (50%), Gaps = 3/365 (0%)
Query: 29 LLNRARFVSSGAVSTDFVEXXXXXXXXXXXXXXPKRSATNILHKWVLEGNSVTVSELRDI 88
+L R+ SG + ++ P S +L W+ +GN V SEL I
Sbjct: 17 ILRRSFLFHSGKTTPSPLDPYDTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSI 76
Query: 89 AKELRRSQRYKHALEISEWMITHEEHGLSDSDYAMRIDLMTKVFGIDAAERYFEALPVAA 148
K LR+ R+ HAL+IS+WM H H +S+ D A+R+DL+ KV G+ AE++FE +P+
Sbjct: 77 IKMLRKFSRFSHALQISDWMSEHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMER 136
Query: 149 KTSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSV 208
+ Y ALL+ YA K+ KAE+++Q +K+ L YN M+ LY+ G+ V +
Sbjct: 137 RNYHLYGALLNCYASKKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKL 196
Query: 209 VEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYV 268
+ E++ V PDIFT N + + + +++ + + L + W Y + AN Y+
Sbjct: 197 LREMEDETVKPDIFTVNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYI 256
Query: 269 TASHLDNSSSNSLAETEKRI-TQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMI 327
A L + L ++E+ + Q + Y+ L+ Y G K+++ ++W SL
Sbjct: 257 KAG-LTEKALEMLRKSEQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLW-SLYKELDGFY 314
Query: 328 NRNYSCIISAYLMLGHVKEVGEVIDQWKNSTIDFDMLACKKIMDAFRATGLADIANNLNM 387
N Y +ISA L + ++EV +++++W+ FD+ ++ + G+ + A +
Sbjct: 315 NTGYISVISALLKMDDIEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVN 374
Query: 388 ILIEK 392
IL++K
Sbjct: 375 ILVQK 379
>AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:474516-476383 FORWARD
LENGTH=537
Length = 537
Score = 178 bits (451), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 176/295 (59%), Gaps = 3/295 (1%)
Query: 70 LHKWVLEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDYAMRIDLMT 129
L+++++EG +V +L AK LR+ +R +HA EI +WM + S SD+A+ +DL+
Sbjct: 91 LNQFIMEGITVRKDDLFRCAKTLRKFRRPQHAFEIFDWM-EKRKMTFSVSDHAICLDLIG 149
Query: 130 KVFGIDAAERYFEALPVAAKTSE-TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALT 188
K G++AAE YF L +AK + TY AL++ Y EKA+ ++ + + N ++L
Sbjct: 150 KTKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEEKAKAHFEIMDELNFVNNSLP 209
Query: 189 YNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMS 248
+N MM++YM + Q EKVP +V+ +KQR +SP TY++W+ SC + ++D + +I+DEM
Sbjct: 210 FNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQSCGSLNDLDGLEKIIDEMG 269
Query: 249 HGADSNESWTRYLNLANVYVTASHLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGS 308
+++ +W + NLA +Y A + + S +L E+++ + ++ FL+ LYAG+
Sbjct: 270 KDSEAKTTWNTFSNLAAIYTKAGLYEKADS-ALKSMEEKMNPNNRDSHHFLMSLYAGISK 328
Query: 309 KDKLDQIWNSLRMTKQKMINRNYSCIISAYLMLGHVKEVGEVIDQWKNSTIDFDM 363
++ ++W SL+ + ++ N +Y ++ A LG + + ++ +W++ +DM
Sbjct: 329 GPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKIFTEWESKCWAYDM 383
>AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:871268-872885 REVERSE
LENGTH=502
Length = 502
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 169/294 (57%), Gaps = 2/294 (0%)
Query: 70 LHKWVLEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDYAMRIDLMT 129
L+++V+EG V +L AK+LR+ ++ + ALEI EWM +E + SD+A+R++L+
Sbjct: 60 LNQFVMEGVPVKKHDLIRYAKDLRKFRQPQRALEIFEWM-ERKEIAFTGSDHAIRLNLIA 118
Query: 130 KVFGIDAAERYFEALPVAAKTSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTY 189
K G++AAE YF +L + K TY +LL+ Y K KA+ ++ + D N ++L +
Sbjct: 119 KSKGLEAAETYFNSLDDSIKNQSTYGSLLNCYCVEKEEVKAKAHFENMVDLNHVSNSLPF 178
Query: 190 NEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSH 249
N +M +YM +GQ EKVP++V +K+++++P TY++WI SC + ++D V ++LDEM
Sbjct: 179 NNLMAMYMGLGQPEKVPALVVAMKEKSITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKA 238
Query: 250 GADSNESWTRYLNLANVYVTASHLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSK 309
+ SW + NLA +Y+ L + +L E + Y FLI LY G+ +
Sbjct: 239 EGEGIFSWNTFANLAAIYIKVG-LYGKAEEALKSLENNMNPDVRDCYHFLINLYTGIANA 297
Query: 310 DKLDQIWNSLRMTKQKMINRNYSCIISAYLMLGHVKEVGEVIDQWKNSTIDFDM 363
++ ++W+ L+ + N +Y ++ A L + V +V +W+++ +DM
Sbjct: 298 SEVYRVWDLLKKRYPNVNNSSYLTMLRALSKLDDIDGVKKVFAEWESTCWTYDM 351
>AT1G28020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:9768395-9771157 REVERSE
LENGTH=612
Length = 612
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 165/321 (51%), Gaps = 7/321 (2%)
Query: 69 ILHKWVLEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDYAMRIDLM 128
+L +W +GN V S +R I K+LR S + AL++SEWM + L D+A R+ L+
Sbjct: 55 VLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKEKICNLIPEDFAARLHLI 114
Query: 129 TKVFGIDAAERYFEALPVAAKTSETYTALLHSYAGA-KMTEKAEELYQRIKDSNLSFDAL 187
V G++ AE++FE++P A+ YT+LL+SYA + K KAE +Q+++D L +
Sbjct: 115 ENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEATFQKMRDLGLLLRPV 174
Query: 188 TYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILD-- 245
YN MM+LY ++ EKV ++ E+K +V D T N + +A ++ E+ + L+
Sbjct: 175 PYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVTEMEKFLNKW 234
Query: 246 EMSHGADSNESWTRYLNLANVYVTASHLDNSSSNSLAETEKRITQSQWIT-YDFLIILYA 304
E HG W L++A Y+ A + L TE+ + Q + YD L+ LY
Sbjct: 235 EGIHGIKL--EWHTTLDMAKAYLRARS-SGKAMKMLRLTEQLVDQKSLKSAYDHLMKLYG 291
Query: 305 GLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYLMLGHVKEVGEVIDQWKNSTIDFDML 364
G+++++ ++W + + N Y +I + L + + E+ W++ ++FD
Sbjct: 292 EAGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYKVWESLPLEFDHR 351
Query: 365 ACKKIMDAFRATGLADIANNL 385
+ +R G+ + A L
Sbjct: 352 IPTMLASGYRDRGMTEKAEKL 372
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 81/142 (57%), Gaps = 5/142 (3%)
Query: 64 RSATNILHKWVLEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDYAM 123
+ T +L +W G+ + S+L+ + K LR S+++ AL++SEWM + L DYA
Sbjct: 385 KPVTPLLEQW---GDQMKPSDLKCLIKNLRDSKQFSKALQVSEWMGEKQVCNLYLEDYAA 441
Query: 124 RIDLMTKVFGIDAAERYFEALPVAAKTSETYTALLHSYAGA--KMTEKAEELYQRIKDSN 181
R+ L V G++ AE+YFE +P K Y ALL SYA + + +E+ + ++++N
Sbjct: 442 RLYLTENVLGLEEAEKYFENIPENMKDYSVYVALLSSYAKSDKNLGNMVDEILREMEENN 501
Query: 182 LSFDALTYNEMMTLYMSVGQVE 203
+ D +T N ++ +Y + +++
Sbjct: 502 VDPDLITVNHVLKVYAAESKIQ 523
>AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926535-8927722 FORWARD
LENGTH=395
Length = 395
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 148/286 (51%), Gaps = 3/286 (1%)
Query: 108 MITHEEHGLSDSDYAMRIDLMTKVFGIDAAERYFEALPVAAKTSETYTALLHSYAGAKMT 167
M H H +S+ D A+R+DL+ KV G+ AE++FE +P+ + Y ALL+ YA K+
Sbjct: 1 MSEHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVL 60
Query: 168 EKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLW 227
KAE+++Q +K+ L YN M+ LY+ G+ V ++ E++ V PDIFT N
Sbjct: 61 HKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTR 120
Query: 228 ISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASHLDNSSSNSLAETEKR 287
+ + + +++ + + L + W Y + AN Y+ A L + L ++E+
Sbjct: 121 LHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAG-LTEKALEMLRKSEQM 179
Query: 288 I-TQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYLMLGHVKE 346
+ Q + Y+ L+ Y G K+++ ++W SL N Y +ISA L + ++E
Sbjct: 180 VNAQKRKHAYEVLMSFYGAAGKKEEVYRLW-SLYKELDGFYNTGYISVISALLKMDDIEE 238
Query: 347 VGEVIDQWKNSTIDFDMLACKKIMDAFRATGLADIANNLNMILIEK 392
V +++++W+ FD+ ++ + G+ + A + IL++K
Sbjct: 239 VEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQK 284
>AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 147/298 (49%), Gaps = 18/298 (6%)
Query: 62 PKRSATNILHKWVLEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDY 121
P S + L KWV EGN +T E+ +LRR + Y AL++SEW+ +++ +++ DY
Sbjct: 140 PGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDY 199
Query: 122 AMRIDLMTKVFGIDAAERYFEALPVAAKTSETYTALLHSYAGAKMTEKAEELYQRIKDSN 181
A R+DL K+ G++ E + +P + K Y LL + A +K+E ++ ++KD
Sbjct: 200 ASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDLG 259
Query: 182 LSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVR 241
T ++M+ L+ + + +K+ V+ +++ N+ P + TY + I AT +I +
Sbjct: 260 FPLSGFTCDQMLLLHKRIDR-KKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGME 318
Query: 242 RILDEMS-HGADSNESWTRYLNLANVYVTASH-----LDNSSSNSLAETEKRITQSQWIT 295
+IL+ M G + L+ +TA H L + + L E E ++
Sbjct: 319 QILETMKDEGVE--------LDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRA 370
Query: 296 YDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYLMLGHVKEVGEVIDQ 353
+ L+ +YA LG +D++ +IW ++ + K I A+ L V+E + ++
Sbjct: 371 FKDLLSIYASLGREDEVKRIW---KICESKPYFEESLAAIQAFGKLNKVQEAEAIFEK 425
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 75 LEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDYAMRIDLMTKVFGI 134
LE N +L I L R K W I + +S A I K+ +
Sbjct: 364 LEANRRAFKDLLSIYASLGREDEVKRI-----WKICESKPYFEESLAA--IQAFGKLNKV 416
Query: 135 DAAERYFEALPVAAK--TSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEM 192
AE FE + + +S TY+ LL Y KM K ++L +R+ +S +A T++ +
Sbjct: 417 QEAEAIFEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDAL 476
Query: 193 MTLYMSVGQVEKVPSVVEE 211
+ LY+ G+VEK S++++
Sbjct: 477 IKLYVEAGEVEKADSLLDK 495
>AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 147/298 (49%), Gaps = 18/298 (6%)
Query: 62 PKRSATNILHKWVLEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDY 121
P S + L KWV EGN +T E+ +LRR + Y AL++SEW+ +++ +++ DY
Sbjct: 140 PGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDY 199
Query: 122 AMRIDLMTKVFGIDAAERYFEALPVAAKTSETYTALLHSYAGAKMTEKAEELYQRIKDSN 181
A R+DL K+ G++ E + +P + K Y LL + A +K+E ++ ++KD
Sbjct: 200 ASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDLG 259
Query: 182 LSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVR 241
T ++M+ L+ + + +K+ V+ +++ N+ P + TY + I AT +I +
Sbjct: 260 FPLSGFTCDQMLLLHKRIDR-KKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGME 318
Query: 242 RILDEMS-HGADSNESWTRYLNLANVYVTASH-----LDNSSSNSLAETEKRITQSQWIT 295
+IL+ M G + L+ +TA H L + + L E E ++
Sbjct: 319 QILETMKDEGVE--------LDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRA 370
Query: 296 YDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYLMLGHVKEVGEVIDQ 353
+ L+ +YA LG +D++ +IW ++ + K I A+ L V+E + ++
Sbjct: 371 FKDLLSIYASLGREDEVKRIW---KICESKPYFEESLAAIQAFGKLNKVQEAEAIFEK 425
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 75 LEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDYAMRIDLMTKVFGI 134
LE N +L I L R K W I + +S A I K+ +
Sbjct: 364 LEANRRAFKDLLSIYASLGREDEVKRI-----WKICESKPYFEESLAA--IQAFGKLNKV 416
Query: 135 DAAERYFEALPVAAK--TSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEM 192
AE FE + + +S TY+ LL Y KM K ++L +R+ +S +A T++ +
Sbjct: 417 QEAEAIFEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDAL 476
Query: 193 MTLYMSVGQVEKVPSVVEE 211
+ LY+ G+VEK S++++
Sbjct: 477 IKLYVEAGEVEKADSLLDK 495
>AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 147/298 (49%), Gaps = 18/298 (6%)
Query: 62 PKRSATNILHKWVLEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDY 121
P S + L KWV EGN +T E+ +LRR + Y AL++SEW+ +++ +++ DY
Sbjct: 140 PGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDY 199
Query: 122 AMRIDLMTKVFGIDAAERYFEALPVAAKTSETYTALLHSYAGAKMTEKAEELYQRIKDSN 181
A R+DL K+ G++ E + +P + K Y LL + A +K+E ++ ++KD
Sbjct: 200 ASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDLG 259
Query: 182 LSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVR 241
T ++M+ L+ + + +K+ V+ +++ N+ P + TY + I AT +I +
Sbjct: 260 FPLSGFTCDQMLLLHKRIDR-KKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGME 318
Query: 242 RILDEMS-HGADSNESWTRYLNLANVYVTASH-----LDNSSSNSLAETEKRITQSQWIT 295
+IL+ M G + L+ +TA H L + + L E E ++
Sbjct: 319 QILETMKDEGVE--------LDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRA 370
Query: 296 YDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYLMLGHVKEVGEVIDQ 353
+ L+ +YA LG +D++ +IW ++ + K I A+ L V+E + ++
Sbjct: 371 FKDLLSIYASLGREDEVKRIW---KICESKPYFEESLAAIQAFGKLNKVQEAEAIFEK 425
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 75 LEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDYAMRIDLMTKVFGI 134
LE N +L I L R K W I + +S A I K+ +
Sbjct: 364 LEANRRAFKDLLSIYASLGREDEVKRI-----WKICESKPYFEESLAA--IQAFGKLNKV 416
Query: 135 DAAERYFEALPVAAK--TSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEM 192
AE FE + + +S TY+ LL Y KM K ++L +R+ +S +A T++ +
Sbjct: 417 QEAEAIFEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDAL 476
Query: 193 MTLYMSVGQVEKVPSVVEE 211
+ LY+ G+VEK S++++
Sbjct: 477 IKLYVEAGEVEKADSLLDK 495
>AT3G11380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3564079-3565779 FORWARD
LENGTH=541
Length = 541
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 151/305 (49%), Gaps = 38/305 (12%)
Query: 85 LRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDYAMRIDLMTKVFGIDAAERYFEAL 144
LR I ++LR S R + ALE+S+WM+ + + L + D++ R L KV ++ AE++FE++
Sbjct: 78 LRGIVEKLRSSNRPRQALEVSDWMVEQKMYNLPE-DFSARFHLTEKVLNLEEAEKFFESI 136
Query: 145 PVAAKTSETYTALLHSYA---GAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQ 201
P + Y +LL SYA G K +KAE +++++K L YN M +LY S+G
Sbjct: 137 PENMRFESMYNSLLRSYARQSGEKALKKAESVFKKMKKLGLLLRPSPYNSMTSLYSSLGN 196
Query: 202 VEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYL 261
+KV ++ E+K+ NV D T N + AA ++ + + L AD E
Sbjct: 197 RDKVDEILREMKENNVELDNVTVNNALRVYAAVSDVATMDKFL------ADRKE------ 244
Query: 262 NLANVYVTASHLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRM 321
+ LD + ++A+ Y+ L+ LY G + + ++W+ +
Sbjct: 245 --------ITRLDGLTMLAMAK-----------AYE-LMSLYGEAGEIEDVHRVWDKYKA 284
Query: 322 TKQKMINRNYSCIISAYLMLGHVKEVGEV-IDQWKNSTIDFDMLACKKIMDAFRATGLAD 380
T+QK N + +I + L LG K ++ ++W+ S ++FD ++ +R G+
Sbjct: 285 TRQK-DNEEFRTLIGSLLKLGDTKGAEKIYYNEWECSGLEFDNRIPDMLVSGYREKGMVM 343
Query: 381 IANNL 385
A+ L
Sbjct: 344 KADKL 348
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 98/179 (54%), Gaps = 2/179 (1%)
Query: 67 TNILHKWVLEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDYAMRID 126
T +L + +GN V+ LRD+ K LR S + ALE S WM + L DYA R+
Sbjct: 363 TLLLEEMDKKGNKVSPPGLRDLIKNLRDSNQLSKALEASTWMCQKKVFNLFSEDYATRLH 422
Query: 127 LMTKVFGIDAAERYFE-ALPVAAKTSETYTALLHSYAGAKMTE-KAEELYQRIKDSNLSF 184
L KV G++ AE +FE ++P K Y LL YA + T+ KAE +++++++ L
Sbjct: 423 LTEKVLGLEEAENFFESSIPENMKDYSVYDTLLSCYARSSNTQSKAEAVFEKMRELGLQS 482
Query: 185 DALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRI 243
+N +++LY G++ V ++ ++K +N+ PDI T N + + A L ID + ++
Sbjct: 483 KLSPFNSLISLYSGQGKLSVVNILLCDMKHKNIEPDIVTRNNVLRANAYILAIDSMEKV 541
>AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5318307-5320422 FORWARD
LENGTH=594
Length = 594
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 144/284 (50%), Gaps = 11/284 (3%)
Query: 65 SATNILHKWVLEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDYAMR 124
S + L KWV +G E +LR+ + + AL+++EW+ +++ + + DYA R
Sbjct: 141 SVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQMTEWLDENKQFEMEERDYACR 200
Query: 125 IDLMTKVFGIDAAERYFEALPVAAKTSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSF 184
+DL++KV G E Y + +P + + Y LL ++ AE ++ ++KD
Sbjct: 201 LDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDLGFPL 260
Query: 185 DALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRIL 244
T N+M+ LY V + +K+ V+ L++ N+ P++ TY + I + ++ +I + +I+
Sbjct: 261 STFTCNQMLILYKRVDK-KKIADVLLLLEKENLKPNLNTYKILIDTKGSSNDITGMEQIV 319
Query: 245 DEMSHGADSNESWTRYLNLANVYVTASHLDNSSSNSLAETE-KRITQSQWITYDFLIILY 303
+ M + R L +A Y +A L + L E E + + +++ + D L + Y
Sbjct: 320 ETMKSEGVELDLRARAL-IARHYASAG-LKEKAEKVLKEMEGESLEENRHMCKDLLSV-Y 376
Query: 304 AGLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYLMLGHVKEV 347
L +D++ ++W ++ ++ N Y+ +++A L G + +V
Sbjct: 377 GYLQREDEVRRVW---KICEE---NPRYNEVLAAILAFGKIDKV 414
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 4/144 (2%)
Query: 130 KVFGIDAAERYFE-ALPVAAK-TSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDAL 187
K+ + AE FE L ++ + +S Y+ LL Y KM + ++L +++ DS + AL
Sbjct: 410 KIDKVKDAEAVFEKVLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGAL 469
Query: 188 TYNEMMTLYMSVGQVEKVPSVVEE-LKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDE 246
T++ ++ LY+ G+VEK S + + ++ + + P + ++ + ++ +I
Sbjct: 470 TWDAVIKLYVEAGEVEKAESSLSKAIQSKQIKPLMSSFMYLMHEYVRRGDVHNTEKIFQR 529
Query: 247 MSHGADSNESWTRYLNLANVYVTA 270
M + W Y L YV A
Sbjct: 530 MKQAGYQSRFWA-YQTLIQAYVNA 552
>AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2336649-2338481 REVERSE
LENGTH=534
Length = 534
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 130/288 (45%), Gaps = 5/288 (1%)
Query: 70 LHKWVLEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDYAMRIDLMT 129
L W+ +G V ++ LR+ R K ALE+ EW+I + L + +Y+ ++
Sbjct: 85 LQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALELMEWIIRERPYRLGELEYSYLLEFTV 144
Query: 130 KVFGIDAAERYFEALPVAAKTSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTY 189
K+ G+ E+ F +P + Y L+ + + A E +++++ L Y
Sbjct: 145 KLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRELGYRTSHLVY 204
Query: 190 NEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSH 249
N ++ + G+ + + + +K +P + TY++ + A NID V + D M
Sbjct: 205 NRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLKAFDGMKK 264
Query: 250 -GADSNESWTRYLNLANVYVTASHLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGS 308
G + NE Y LA + A L + E EK IT W T D L+ILY LG
Sbjct: 265 AGVEPNE--VSYCILAMAHAVA-RLYTVAEAYTEEIEKSITGDNWSTLDILMILYGRLGK 321
Query: 309 KDKLDQIWNSLRMTKQKMINRNYSCIISAYLMLGHVKEVGEVIDQWKN 356
+ +L + WN +R + +++Y A+ +G++ E+ + KN
Sbjct: 322 EKELARTWNVIRGF-HHVRSKSYLLATEAFARVGNLDRAEELWLEMKN 368
>AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5275568-5277658 REVERSE
LENGTH=610
Length = 610
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 139/283 (49%), Gaps = 11/283 (3%)
Query: 64 RSATNILHKWVLEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDYAM 123
+S ++L KWV EG ++ +E+ LR+ + Y L++ EW+ + + ++++YA
Sbjct: 155 KSVKHVLEKWVKEGKDLSQAEVTLAIHNLRKRKSYAMCLQLWEWLGANTQFEFTEANYAS 214
Query: 124 RIDLMTKVFGIDAAERYFEALPVAAKTSETYTALLHSYAGAKMTEKAEELYQRIKDSNLS 183
++DL+ KV + AE + + +P +++ Y LL + KAE+++ ++K+
Sbjct: 215 QLDLVAKVHSLQKAEIFLKDIPESSRGEVVYRTLLANCVLKHHVNKAEDIFNKMKELKFP 274
Query: 184 FDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRI 243
N+++ LY S+ +K+ V+ +++ N+ P TY+ I+S +I + +I
Sbjct: 275 TSVFACNQLLLLY-SMHDRKKISDVLLLMERENIKPSRATYHFLINSKGLAGDITGMEKI 333
Query: 244 LDEMSHGADSNESWTRYLNLANVYVTASHLDNSSSNSLAETE-KRITQSQWITYDFLIIL 302
++ + + + + LA Y+ A L + + + E E K + Q+ W+ L+ L
Sbjct: 334 VETIKEEGIELDPELQSI-LAKYYIRAG-LKERAQDLMKEIEGKGLQQTPWVCRS-LLPL 390
Query: 303 YAGLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYLMLGHVK 345
YA +G D N R+++ N Y ISA G +K
Sbjct: 391 YADIGDSD------NVRRLSRFVDQNPRYDNCISAIKAWGKLK 427
>AT1G28000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9756674-9757947 REVERSE
LENGTH=388
Length = 388
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 118/254 (46%), Gaps = 11/254 (4%)
Query: 63 KRSATNILHKWVLEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDYA 122
++ T L +W+ G + + LR + L SQR+ HAL++SEW+ LS D+A
Sbjct: 46 QKKVTPPLDEWLKRGKDLNPAVLRGLINSLCESQRFNHALQVSEWITKRGIFDLSTEDFA 105
Query: 123 MRIDLMTKVFGIDAAERYFEALPVAAKTSETYTALLHSYAGAKMTE-KAEELYQRIKDSN 181
R+ L+ G+ AE++F+++P + +T LL Y +K T +AE YQ ++ N
Sbjct: 106 SRLCLVEISTGLKEAEKFFKSIPENMRDDSVHTTLLSLYTISKKTRHEAEATYQTMRVQN 165
Query: 182 LSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDI-FTYNLWISSCAATLNIDEV 240
+ Y M+ LY +G+ + ++ ++K+ V D T N + + A+ +++ +
Sbjct: 166 MLLKPYPYYSMIYLYALLGEKNMIDEILRQMKENGVEHDKNLTANNVLKAYASLPDVEAM 225
Query: 241 RRILDEMSHGADSNESWTRYLNLANVYVTASHLDNSSSNSLAETEKRI-----TQSQWIT 295
L G + E + + ++L SS E +R T+S+
Sbjct: 226 EMFL----MGLEVEEPRFSLAWQTGISIAKAYLKGGSSRKAVEMLRRTELVVDTKSKDSA 281
Query: 296 YDFLIILYAGLGSK 309
L+++Y G+K
Sbjct: 282 NKVLMMMYWDAGAK 295
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 141/322 (43%), Gaps = 5/322 (1%)
Query: 78 NSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDYAMRIDLMTKVFGIDAA 137
N +++++ + KE ++ +L + ++M ++ Y + I L+ + +D
Sbjct: 101 NKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKC 160
Query: 138 ERYFEALPV--AAKTSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTL 195
F+ +P +++ +YTAL+++Y E + EL R+K+ +S LTYN ++
Sbjct: 161 LEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINA 220
Query: 196 YMSVG-QVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSN 254
G E + + E++ + PDI TYN +S+CA DE + M+ G
Sbjct: 221 CARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVP 280
Query: 255 ESWTRYLNLANVYVTASHLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQ 314
+ T Y +L + L+ + L E + +Y+ L+ YA GS +
Sbjct: 281 D-LTTYSHLVETFGKLRRLEK-VCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMG 338
Query: 315 IWNSLRMTKQKMINRNYSCIISAYLMLGHVKEVGEVIDQWKNSTIDFDMLACKKIMDAFR 374
+++ ++ YS +++ + G +V ++ + K+S D D +++ F
Sbjct: 339 VFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFG 398
Query: 375 ATGLADIANNLNMILIEKNINP 396
G L ++E+NI P
Sbjct: 399 EGGYFKEVVTLFHDMVEENIEP 420
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 65/132 (49%), Gaps = 2/132 (1%)
Query: 119 SDYAMRIDLMTKVFGIDAAERYFEALPVAAKT--SETYTALLHSYAGAKMTEKAEELYQR 176
+ Y + ++ K I A F + A T + TY+ LL+ + + + +L+
Sbjct: 318 TSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLE 377
Query: 177 IKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLN 236
+K SN DA TYN ++ ++ G ++V ++ ++ + N+ PD+ TY I +C
Sbjct: 378 MKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGL 437
Query: 237 IDEVRRILDEMS 248
++ R+IL M+
Sbjct: 438 HEDARKILQYMT 449
>AT1G43010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:16153609-16154468 FORWARD
LENGTH=257
Length = 257
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 79/156 (50%), Gaps = 4/156 (2%)
Query: 63 KRSATNILHKWVLEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDYA 122
K S +L +W +G V S LR + K L + + ALE S+WM H D A
Sbjct: 49 KASIIPLLEQWRKQGYEVNPSHLRGLIKNLSDCKNFTTALEASKWMFKHSVFDNFPEDCA 108
Query: 123 MRIDLMTKVFGIDAAERYFEALPVAAKTSETYTALLHSYA-GAKMTEKAEELYQRIKDSN 181
++ L+ V G++ AE+ F+ +P + Y+ LL SY + +KAE ++++++
Sbjct: 109 AQLHLVNTVLGLEEAEKMFKNIP---EKMRDYSVLLSSYTKPVRTVDKAEATFKKMRELG 165
Query: 182 LSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNV 217
+N M+ LY + +++ V ++ +LK+ N+
Sbjct: 166 FLLKPYLFNSMICLYGQLQRLDMVEKLLYKLKKNNM 201
>AT3G11350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3558495-3560078 FORWARD
LENGTH=359
Length = 359
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 76/153 (49%), Gaps = 18/153 (11%)
Query: 95 SQRYKHALEISEWMITHEEHGLSDSDYAMRIDLMTKVFGIDAAERYFEALPVAAKTSETY 154
+ R ALE+S+WMI H+ L D++ R L+ V G++ AE+YFE++P + Y
Sbjct: 53 TARLHQALEVSDWMIEHKICCLVPEDFSARFQLIENVLGLEEAEKYFESIPENLRGESLY 112
Query: 155 TALLHSYAG---AKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEE 211
TALL SYA K ++A ++ + +D +S S G +KV + E
Sbjct: 113 TALLRSYAKRSEKKYLDRASRIHIQ-EDERIS--------------SFGTRDKVDESLRE 157
Query: 212 LKQRNVSPDIFTYNLWISSCAATLNIDEVRRIL 244
+K+ N+ D T N + AA ++ + R L
Sbjct: 158 MKESNIDLDRLTVNKALRVYAAASDVAAMERFL 190
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 131/319 (41%), Gaps = 57/319 (17%)
Query: 121 YAMRIDLMTKVFGIDAAERYFEALPVAAKTSE--TYTALLHSYAGAKMTEKAEELYQRIK 178
Y + +D K I+ A ++F + T TYTAL+H+Y AK A EL++ +
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 580
Query: 179 DSNLSFDALTYNEMMTLYMSVGQVEK-------------VPSVVEELKQRNVS---PDIF 222
+ +TY+ ++ + GQVEK VP V KQ + + P++
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVV 640
Query: 223 TYNLWISSCAATLNIDEVRRILDEMS-HGADSNESWTRYLNLANVYVTASHLDNSSSNSL 281
TY + + ++E R++LD MS G + N+ Y L + LD +
Sbjct: 641 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQ--IVYDALIDGLCKVGKLDEAQEVKT 698
Query: 282 AETEKRITQSQWITYDFLI----------------------------ILYA----GLGSK 309
+E + + TY LI ++Y GL
Sbjct: 699 EMSEHGFPATLY-TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 757
Query: 310 DKLDQIWNSLRMTKQKMINRN---YSCIISAYLMLGHVKEVGEVIDQWKNSTIDFDMLAC 366
K D+ + ++M ++K N Y+ +I + M+G ++ E++++ + + + +
Sbjct: 758 GKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTY 817
Query: 367 KKIMDAFRATGLADIANNL 385
+ ++D G D+A+NL
Sbjct: 818 RVLIDHCCKNGALDVAHNL 836
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 4/151 (2%)
Query: 103 EISEWMITHEEHGLSDS--DYAMRIDLMTKVFGIDAAERYFEAL--PVAAKTSETYTALL 158
E E EHG + Y+ ID KV D A + + A YT ++
Sbjct: 692 EAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMI 751
Query: 159 HSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVS 218
T++A +L Q +++ + +TY M+ + +G++E ++E + + V+
Sbjct: 752 DGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVA 811
Query: 219 PDIFTYNLWISSCAATLNIDEVRRILDEMSH 249
P+ TY + I C +D +L+EM
Sbjct: 812 PNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 842
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/336 (17%), Positives = 133/336 (39%), Gaps = 22/336 (6%)
Query: 78 NSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSD-SDYAMRIDLMTKVFGIDA 136
N + VS + L + +Y+ A + MI + + D S Y+ ++ + ++
Sbjct: 447 NKINVSSF---TRCLCSAGKYEKAFSVIREMIG--QGFIPDTSTYSKVLNYLCNASKMEL 501
Query: 137 AERYFEALPVAAKTSE--TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMT 194
A FE + ++ TYT ++ S+ A + E+A + + +++ + + +TY ++
Sbjct: 502 AFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIH 561
Query: 195 LYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSN 254
Y+ +V + E + P+I TY+ I +++ +I + M D
Sbjct: 562 AYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVP 621
Query: 255 ES---WTRYLN---LANVYVTASHLDNSSSNSLAETEKRI--------TQSQWITYDFLI 300
+ + +Y + NV + LD + E +++ + I YD LI
Sbjct: 622 DVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 681
Query: 301 ILYAGLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYLMLGHVKEVGEVIDQWKNSTID 360
+G D+ ++ + YS +I Y + +V+ + ++
Sbjct: 682 DGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA 741
Query: 361 FDMLACKKIMDAFRATGLADIANNLNMILIEKNINP 396
+++ +++D G D A L ++ EK P
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQP 777
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 130/279 (46%), Gaps = 26/279 (9%)
Query: 83 SELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDYAMRIDLMTKVFGIDA----AE 138
++L + K L S ++ A+ + EW++ G D+ + I++ ++ G ++ A
Sbjct: 137 TDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQV-IEIFVRILGRESQYSVAA 195
Query: 139 RYFEALPVAAKTSET--YTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLY 196
+ + +P+ + YT +LH+Y+ EKA +L++R+K+ S +TYN ++ ++
Sbjct: 196 KLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVF 255
Query: 197 MSVGQV-EKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMS-----HG 250
+G+ K+ V++E++ + + D FT + +S+CA + E + E+ G
Sbjct: 256 GKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPG 315
Query: 251 ADSNESWTRYLNLANVYVTASHLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLG-SK 309
+ + + A VY A + L E E+ + +TY+ L+ Y G SK
Sbjct: 316 TVTYNALLQVFGKAGVYTEALSV-------LKEMEENSCPADSVTYNELVAAYVRAGFSK 368
Query: 310 DKLDQIWNSLRMTKQKMINR--NYSCIISAYLMLGHVKE 346
+ I MTK+ ++ Y+ +I AY G E
Sbjct: 369 EAAGVIE---MMTKKGVMPNAITYTTVIDAYGKAGKEDE 404
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 52/96 (54%)
Query: 154 YTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELK 213
+ ++L + M ++AE + + I++ LS D +TYN +M +Y+ G+ K +++ L+
Sbjct: 634 FNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLE 693
Query: 214 QRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSH 249
+ + PD+ +YN I + E R+L EM+
Sbjct: 694 KSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTE 729
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 52/96 (54%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
TY +L+ Y KAEE+ + ++ S L D ++YN ++ + G +++ ++ E+
Sbjct: 668 TYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEM 727
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMS 248
+R + P IFTYN ++S A E+ +++ M+
Sbjct: 728 TERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMA 763
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 97 RYKHALEISEWMITHEEHGLSDSDYAMRIDLMTKVFGIDAAERYFE---ALPVAAKTSET 153
R +EIS+ +T G+ Y+ + ++K+ + A R F + PV + ++
Sbjct: 358 RLDGVVEISKRYMTQ---GI----YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGE-RDS 409
Query: 154 YTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELK 213
Y ++L S GA T +A E+ +I + + D + YN + + + Q+ + + E++K
Sbjct: 410 YMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMK 469
Query: 214 QRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASHL 273
+ SPDIFTYN+ I+S +DE I +E+ +D Y +L N +
Sbjct: 470 KDGPSPDIFTYNILIASFGRVGEVDEAINIFEELER-SDCKPDIISYNSLINCLGKNGDV 528
Query: 274 DNSSSNSLAETEKRITQSQWITYDFLI 300
D + E +++ +TY L+
Sbjct: 529 DEAHVR-FKEMQEKGLNPDVVTYSTLM 554
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 90/208 (43%), Gaps = 15/208 (7%)
Query: 151 SETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVE 210
S TY LL +Y ++ KA ++Y I+ D YN ++ ++ + EK V E
Sbjct: 203 SFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLD---ALAKDEKACQVFE 259
Query: 211 ELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEM-SHGADSNESWTRYLNLANVYVT 269
++K+R+ D +TY + I + DE + +EM + G N Y L V
Sbjct: 260 DMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLN--VVGYNTLMQVLAK 317
Query: 270 ASHLDNSSS--NSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMI 327
+D + + + ET R + TY L+ L G +LD + + ++K+ M
Sbjct: 318 GKMVDKAIQVFSRMVETGCRPNE---YTYSLLLNLLVAEGQLVRLDGV---VEISKRYMT 371
Query: 328 NRNYSCIISAYLMLGHVKEVGEVI-DQW 354
YS ++ LGHV E + D W
Sbjct: 372 QGIYSYLVRTLSKLGHVSEAHRLFCDMW 399
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 128/309 (41%), Gaps = 54/309 (17%)
Query: 120 DYAMRIDLMTKVFGIDAA----------ERYFEALPVAAKTSE--TYTALLHSYAGAKMT 167
+Y +R +L+T IDA ++F+ + + T+ +LL + +
Sbjct: 296 EYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLW 355
Query: 168 EKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLW 227
E A L+ + + + D +YN ++ GQ++ ++ ++ + + P++ +Y+
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 228 ISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASHLDNSSSNSLAETEKR 287
I A DE + EM RYL +A LD S N+L +
Sbjct: 416 IDGFAKAGRFDEALNLFGEM-----------RYLGIA--------LDRVSYNTLLSIYTK 456
Query: 288 ITQSQ-----------------WITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRN 330
+ +S+ +TY+ L+ G G + K D++ K++ + N
Sbjct: 457 VGRSEEALDILREMASVGIKKDVVTYNALL---GGYGKQGKYDEVKKVFTEMKREHVLPN 513
Query: 331 ---YSCIISAYLMLGHVKEVGEVIDQWKNSTIDFDMLACKKIMDAFRATGLADIANNLNM 387
YS +I Y G KE E+ ++K++ + D++ ++DA GL A +L
Sbjct: 514 LLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLID 573
Query: 388 ILIEKNINP 396
+ ++ I+P
Sbjct: 574 EMTKEGISP 582
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/297 (18%), Positives = 127/297 (42%), Gaps = 6/297 (2%)
Query: 88 IAKELRRSQRYKHALEISEWMITHEEHGLSDSDYA-MRIDLMTKVFGIDAAERYFEALPV 146
I +EL A+ E+ + E A I + + + A+R FE
Sbjct: 202 IIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFA 261
Query: 147 AA--KTSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVG-QVE 203
T ++AL+ +Y + + E+A ++ +K+ L + +TYN ++ G + +
Sbjct: 262 GGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFK 321
Query: 204 KVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNL 263
+V +E+++ V PD T+N ++ C+ + R + DEM++ + ++ Y L
Sbjct: 322 QVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFS-YNTL 380
Query: 264 ANVYVTASHLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTK 323
+ +D + LA+ + ++Y +I +A G D+ ++ +R
Sbjct: 381 LDAICKGGQMD-LAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG 439
Query: 324 QKMINRNYSCIISAYLMLGHVKEVGEVIDQWKNSTIDFDMLACKKIMDAFRATGLAD 380
+ +Y+ ++S Y +G +E +++ + + I D++ ++ + G D
Sbjct: 440 IALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYD 496
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 8/132 (6%)
Query: 121 YAMRIDLMTKVFGIDAAERYFEAL-----PVAAKTSETYTALLHSYAGAKMTEKAEELYQ 175
Y ID + D A +YF AL P + TS T L+ + + AE +++
Sbjct: 411 YTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTS---TILIGACSRFGSISDAESVFR 467
Query: 176 RIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATL 235
+K L D +TYN +M Y Q+ KV +++E++ +SPD+ TYN+ I S
Sbjct: 468 NMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRG 527
Query: 236 NIDEVRRILDEM 247
IDE I+ E+
Sbjct: 528 YIDEANEIISEL 539
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
T +ALLH Y A+ EKA L+ ++ D+ L D + YN ++ Y SVG +EK ++ +
Sbjct: 585 TCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLM 644
Query: 213 KQRNVSPD 220
QR + P+
Sbjct: 645 VQRGMLPN 652
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 8/132 (6%)
Query: 121 YAMRIDLMTKVFGIDAAERYFEAL-----PVAAKTSETYTALLHSYAGAKMTEKAEELYQ 175
Y ID + D A +YF AL P + TS T L+ + + AE +++
Sbjct: 411 YTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTS---TILIGACSRFGSISDAESVFR 467
Query: 176 RIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATL 235
+K L D +TYN +M Y Q+ KV +++E++ +SPD+ TYN+ I S
Sbjct: 468 NMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRG 527
Query: 236 NIDEVRRILDEM 247
IDE I+ E+
Sbjct: 528 YIDEANEIISEL 539
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
T +ALLH Y A+ EKA L+ ++ D+ L D + YN ++ Y SVG +EK ++ +
Sbjct: 585 TCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLM 644
Query: 213 KQRNVSPD 220
QR + P+
Sbjct: 645 VQRGMLPN 652
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 121/279 (43%), Gaps = 10/279 (3%)
Query: 126 DLMTKVFGI----DAAERYFEALPVAAKTSE--TYTALLHSYAGAKMTEKAEELYQRIKD 179
++M K +GI + A FE++ T + TY L+ A A M K +++++
Sbjct: 509 NVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRE 568
Query: 180 SNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDE 239
+ D + Y +++ ++ +GQ+ V +E+ + N+ PD+ Y + I++ A T N+ +
Sbjct: 569 TGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQ 628
Query: 240 VRRILDEMSHGADSNESWTRYLNLANVYVTASHLDNSSS--NSLAETEKRITQSQWITYD 297
++ M S Y +L +Y +LD + + L ++ + T +
Sbjct: 629 AMSYVEAMKEAGIPGNS-VIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSN 687
Query: 298 FLIILYAGLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYLMLGHVKEVGEVIDQWKNS 357
+I LY+ K + I++S++ + + ++ ++ Y G +E ++ Q +
Sbjct: 688 CMINLYSERSMVRKAEAIFDSMKQ-RGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREM 746
Query: 358 TIDFDMLACKKIMDAFRATGLADIANNLNMILIEKNINP 396
I D L+ ++ F G A ++ I P
Sbjct: 747 KILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQP 785
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 108/246 (43%), Gaps = 16/246 (6%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
TYTA++ E+A L+ RI + D Y ++ G + + S++ ++
Sbjct: 314 TYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDM 373
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASH 272
+QR + P I TYN I+ + E DE+S G + Y L + Y+ +
Sbjct: 374 EQRGIQPSILTYNTVINGLCMAGRVSEA----DEVSKGVVGD--VITYSTLLDSYIKVQN 427
Query: 273 LDNSSSNSLAETEKRITQSQ----WITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMIN 328
+D ++ E +R +++ + + L+ + +G+ + D ++ ++
Sbjct: 428 ID-----AVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDT 482
Query: 329 RNYSCIISAYLMLGHVKEVGEVIDQWKNSTIDFDMLACKKIMDAFRATGLADIANNLNMI 388
Y+ +I Y G ++E E+ ++ + S++ + +I+DA G+ D A + +
Sbjct: 483 ATYATMIKGYCKTGQIEEALEMFNELRKSSVS-AAVCYNRIIDALCKKGMLDTATEVLIE 541
Query: 389 LIEKNI 394
L EK +
Sbjct: 542 LWEKGL 547
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 100/219 (45%), Gaps = 18/219 (8%)
Query: 134 IDAAERYFEALPVAAKTSE--TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNE 191
I AE+ F+ + +A TY+ ++ + +A +++ + DS + +A+T+N
Sbjct: 271 ISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNN 330
Query: 192 MMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEM-SHG 250
+M +++ G+ EKV V ++K+ PD TYN I + N++ ++L+ M
Sbjct: 331 LMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKK 390
Query: 251 ADSNESWTRYLNLANVYVTASHLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKD 310
+ N S N Y+ N + ++ + + +TY+ L+ ++ G S D
Sbjct: 391 CEVNAST---FNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTD 447
Query: 311 KLDQIWNSLRMTKQ---KMINRN---YSCIISAYLMLGH 343
+ L+M K+ K + N Y +++ + +GH
Sbjct: 448 MV------LKMKKEMDDKEVEPNVNTYRLLVTMFCGMGH 480
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/339 (19%), Positives = 134/339 (39%), Gaps = 16/339 (4%)
Query: 66 ATNILHKWVLEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSD--YAM 123
A +L + L G D+ L + R A ++ M+ G + D Y
Sbjct: 271 ALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIR---GFAPDDITYGY 327
Query: 124 RIDLMTKVFGIDAAERYFEALPVAAKTSETYTALLHSYAG-AKMTEKAEELYQRIKDSNL 182
++ + K+ +DAA+ F +P + L+H + ++ + L + +
Sbjct: 328 LMNGLCKIGRVDAAKDLFYRIPKPEIV--IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGI 385
Query: 183 SFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRR 242
D TYN ++ Y G V V+ +++ + P++++Y + + IDE
Sbjct: 386 VPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYN 445
Query: 243 ILDEMSHGADSNESWTRYLNLANVYVTASHLDNSSSNSLAETEKRITQSQWITYDFLIIL 302
+L+EMS AD + T N H + E ++ + T++ LI
Sbjct: 446 VLNEMS--ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI-- 501
Query: 303 YAGLGSKDKLDQ-IWNSLRMTKQKMI--NRNYSCIISAYLMLGHVKEVGEVIDQWKNSTI 359
+GL D++ +W M + ++ Y+ +I+A+L G +KE +++++
Sbjct: 502 -SGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 560
Query: 360 DFDMLACKKIMDAFRATGLADIANNLNMILIEKNINPGN 398
D + ++ G D A +L ++ P N
Sbjct: 561 PLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSN 599
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 94/204 (46%), Gaps = 19/204 (9%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
Y ALL + + + +++Q + + L DA ++ + Y G V V++ +
Sbjct: 245 AYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRM 304
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASH 272
K+ ++ P+++T+N I + +D+ +LDEM + ++WT + A H
Sbjct: 305 KRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYN------SIMAYH 358
Query: 273 LDNSSSNSLAETEKRITQSQWI----TYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMIN 328
D+ N + R+ +++ + TY+ ++ L +G D+ +IW + M
Sbjct: 359 CDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIW-------EGMSE 411
Query: 329 RNYSCIISAYLMLGH--VKEVGEV 350
R + ++ Y ++ H V++ G++
Sbjct: 412 RKFYPTVATYTVMIHGLVRKKGKL 435
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 129/306 (42%), Gaps = 19/306 (6%)
Query: 94 RSQRYKHALEISEWMITHEEHGLSDSDYAMRIDLMTKVFGIDAAERYFEALPVAA--KTS 151
RS R+ A + E M + Y++ I +VF D + + +
Sbjct: 197 RSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNT 256
Query: 152 ETYTALLHSYAGAKM-TEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVE 210
TY L+ +Y AKM E L Q + + + D+ T N + + GQ+E + + E
Sbjct: 257 ITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYE 316
Query: 211 ELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTA 270
+ + + P+I T+N+ + S + N ++ +++ M + SWT + NV + A
Sbjct: 317 KFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQK---YHYSWT--IVTYNVVIDA 371
Query: 271 SHLDNSSSNSLAETEK--RITQSQWITYDFLII--LYAGLGSKDKLDQIWNSLRMTKQKM 326
+ L + E R+ QS+ I + + L G K D+I LR +
Sbjct: 372 F----GRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSD 427
Query: 327 INRN---YSCIISAYLMLGHVKEVGEVIDQWKNSTIDFDMLACKKIMDAFRATGLADIAN 383
I + ++C++ AY + E+ V++ + D + + ++ A+R +G+
Sbjct: 428 IRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVK 487
Query: 384 NLNMIL 389
L+ ++
Sbjct: 488 ELHGVV 493
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/228 (19%), Positives = 100/228 (43%), Gaps = 8/228 (3%)
Query: 154 YTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELK 213
Y L+ K EKA EL+Q + + + Y +++ Y G+ + +++E +K
Sbjct: 153 YVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMK 212
Query: 214 -QRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTAS- 271
N PD+ TY++ I S D+V+ +L +M + T Y L + Y A
Sbjct: 213 SSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTIT-YNTLIDAYGKAKM 271
Query: 272 --HLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINR 329
++++ L E + + W T + + + G G + ++ + + + + R
Sbjct: 272 FVEMESTLIQMLGEDDCK--PDSW-TMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIR 328
Query: 330 NYSCIISAYLMLGHVKEVGEVIDQWKNSTIDFDMLACKKIMDAFRATG 377
++ ++ +Y G+ K++ V++ + + ++ ++DAF G
Sbjct: 329 TFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAG 376
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 75/149 (50%), Gaps = 7/149 (4%)
Query: 106 EWMITHEE---HGLSDS--DYAMRIDLMTKVFGIDAAERYFEALPV--AAKTSETYTALL 158
+ ++ H E HGL+ S Y I M K ++ A + + + V TYT L+
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387
Query: 159 HSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVS 218
++ +A + + + D+ S +TYN ++ + G++E +V+E++K++ +S
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 447
Query: 219 PDIFTYNLWISSCAATLNIDEVRRILDEM 247
PD+ +Y+ +S + ++DE R+ EM
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREM 476
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 48/92 (52%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
TY++L+ + + T++A +LY+ + L D TY ++ Y G +EK + E+
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRIL 244
++ V PD+ TY++ I+ E +R+L
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 132/305 (43%), Gaps = 43/305 (14%)
Query: 90 KELRRSQRYKHALEISEWMITHEEHGLSDSDYAMRIDLMTKVFGI-DAAERYFEALPV-- 146
+ LR ++++ E+ ++ ++ + D+ +RI L+ G+ + A + F+ +P
Sbjct: 95 RRLREAKKFSTIDEVLQYQKKFDD--IKSEDFVIRIMLLYGYSGMAEHAHKLFDEMPELN 152
Query: 147 AAKTSETYTALLHSYAGAKMTEKAEELYQRIKDS-NLSFDALTYNEMMTLYMSVGQVEKV 205
+T +++ ALL +Y +K ++A + ++ + + ++ D +TYN M+ G ++ +
Sbjct: 153 CERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDI 212
Query: 206 PSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMS---------------HG 250
S+ EEL++ PD+ ++N + E RI D M G
Sbjct: 213 LSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRG 272
Query: 251 ADSNESWTRYLNLA---------------NVYVTASHLDNSSSNSLA---ETEKRITQSQ 292
N+ +T LNL N +TA +DN+ + E +++
Sbjct: 273 LTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPD 332
Query: 293 WITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRN--YSCIISAYLMLGHVKEVGEV 350
+TY LI L G D+ ++ S K K+++R Y ++ + G + E ++
Sbjct: 333 TVTYCMLIPLLCKKGDLDRAVEV--SEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQL 390
Query: 351 IDQWK 355
+ K
Sbjct: 391 VKNGK 395
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 88/195 (45%), Gaps = 27/195 (13%)
Query: 67 TNILHKWVLEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHG-LSDSDYAMRI 125
T ++ +V EGN + E R++ KE+ R + + + HG L D+ Y
Sbjct: 258 TALIDTFVKEGNLL---EARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF-- 312
Query: 126 DLM-------------TKVFGIDAAERYFEALPVAAKTSE--------TYTALLHSYAGA 164
DLM T + G ++R + + + + + TY L+H Y A
Sbjct: 313 DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQA 372
Query: 165 KMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTY 224
A++++ R+ D +S D +TYN ++ + G++EK +VE+L++ + DI TY
Sbjct: 373 GKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITY 432
Query: 225 NLWISSCAATLNIDE 239
N+ I T + E
Sbjct: 433 NIIIQGLCRTDKLKE 447
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%)
Query: 152 ETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEE 211
E Y LL +Y K EK + +R+K S D TYN M+ +Y G +++V V++E
Sbjct: 769 EAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKE 828
Query: 212 LKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEM 247
LK+ + PD+ +YN I + ++E ++ EM
Sbjct: 829 LKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEM 864
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/317 (20%), Positives = 133/317 (41%), Gaps = 15/317 (4%)
Query: 65 SATNILHKWVLEGNSVTVSELRDIAKELRRSQRYKH---ALEISEWMITHEEHGLSDSDY 121
SA +L ++ +G+ +L + L R ++ K EI EW+ S+ D+
Sbjct: 92 SAVPVLRQYKTDGDQGLPRDL--VLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDF 149
Query: 122 AMRIDLMTKVFGIDAAERYFEALPVAAKTSE--TYTALLHSYAGAKMTEKAEELYQRIKD 179
M I K+ + AER L T +YTAL+ SY AE +++R++
Sbjct: 150 LMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQS 209
Query: 180 SNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL---KQRNVSPDIFTYNLWISSCAATLN 236
S A+TY ++ ++ + ++ V E L K+ + PD Y++ I N
Sbjct: 210 SGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGN 269
Query: 237 IDEVRRILDEMSHGADSNESWTRYLNLANVYVTASHLDNSSSNSLAETEKRITQSQWITY 296
++ R++ M G +S Y +L + + + S + ++ Q ++Y
Sbjct: 270 YEKARKVFSSMV-GKGVPQSTVTYNSLMSFETSYKEV----SKIYDQMQRSDIQPDVVSY 324
Query: 297 DFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYLMLGHVKEVGEVIDQWKN 356
LI Y +++ ++ + + ++ Y+ ++ A+ + G V++ V +
Sbjct: 325 ALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRR 384
Query: 357 STIDFDMLACKKIMDAF 373
I D+ + ++ A+
Sbjct: 385 DRIFPDLWSYTTMLSAY 401
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/317 (20%), Positives = 133/317 (41%), Gaps = 15/317 (4%)
Query: 65 SATNILHKWVLEGNSVTVSELRDIAKELRRSQRYKH---ALEISEWMITHEEHGLSDSDY 121
SA +L ++ +G+ +L + L R ++ K EI EW+ S+ D+
Sbjct: 85 SAVPVLRQYKTDGDQGLPRDL--VLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDF 142
Query: 122 AMRIDLMTKVFGIDAAERYFEALPVAAKTSE--TYTALLHSYAGAKMTEKAEELYQRIKD 179
M I K+ + AER L T +YTAL+ SY AE +++R++
Sbjct: 143 LMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQS 202
Query: 180 SNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL---KQRNVSPDIFTYNLWISSCAATLN 236
S A+TY ++ ++ + ++ V E L K+ + PD Y++ I N
Sbjct: 203 SGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGN 262
Query: 237 IDEVRRILDEMSHGADSNESWTRYLNLANVYVTASHLDNSSSNSLAETEKRITQSQWITY 296
++ R++ M G +S Y +L + + + S + ++ Q ++Y
Sbjct: 263 YEKARKVFSSMV-GKGVPQSTVTYNSLMSFETSYKEV----SKIYDQMQRSDIQPDVVSY 317
Query: 297 DFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYLMLGHVKEVGEVIDQWKN 356
LI Y +++ ++ + + ++ Y+ ++ A+ + G V++ V +
Sbjct: 318 ALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRR 377
Query: 357 STIDFDMLACKKIMDAF 373
I D+ + ++ A+
Sbjct: 378 DRIFPDLWSYTTMLSAY 394
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 109/274 (39%), Gaps = 48/274 (17%)
Query: 133 GIDAAERYFEALPVAAKTSE--------TYTALLHSYAGAKMTEKAEELYQRIKDSNLSF 184
G R F+A+ + +K E Y ++ + A EL+ R++ +
Sbjct: 148 GFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRA 207
Query: 185 DALTYNEMMTLYMSVGQ-------------VEKVPSVV---------------------- 209
DA+TYN ++ G+ + VP+V+
Sbjct: 208 DAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLY 267
Query: 210 EELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVT 269
EE+ +R V PD+FTYN I+ +DE +++LD M + T Y L N +
Sbjct: 268 EEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVT-YNTLINGFCK 326
Query: 270 ASHLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINR 329
+ +D + E +R ITY+ +I Y G D +I++ RM + I R
Sbjct: 327 SKRVD-EGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS--RMDSRPNI-R 382
Query: 330 NYSCIISAYLMLGHVKEVGEVIDQWKNSTIDFDM 363
YS ++ M V++ + + + S I+ D+
Sbjct: 383 TYSILLYGLCMNWRVEKALVLFENMQKSEIELDI 416
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 139/326 (42%), Gaps = 29/326 (8%)
Query: 63 KRSATNILHKWVLEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDYA 122
+RS N WV N+VT + IAK +++ ALE+ + + + + Y
Sbjct: 80 RRSKAN---GWV---NTVTETLSDLIAK-----KQWLQALEVFDMLREQTFYQPKEGTYM 128
Query: 123 MRIDLMTKVFGIDAAERYFEALPVAA--KTSETYTALLHSYAGAKMTEKAEELYQRIKD- 179
+ L+ K + A++ F+ + T E YTALL +Y + + + A + ++K
Sbjct: 129 KLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSF 188
Query: 180 SNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDE 239
D TY+ ++ + Q + V S+ +E+ +R ++P+ T N+ +S D+
Sbjct: 189 PQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQ 248
Query: 240 VRRILDEM-SHGADSNESWTRYLNLANVYVTASHLDNSSS------NSLAETEKRITQSQ 292
+ ++L +M A + WT + L+ V+ +D S N E E R
Sbjct: 249 MEKVLSDMLVSTACKPDVWTMNIILS-VFGNMGKIDMMESWYEKFRNFGIEPETR----- 302
Query: 293 WITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYLMLGHVKEVGEVID 352
T++ LI Y DK+ + +R + Y+ II A+ +G K + D
Sbjct: 303 --TFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFD 360
Query: 353 QWKNSTIDFDMLACKKIMDAFRATGL 378
Q ++ + D +++ + GL
Sbjct: 361 QMRSEGMKADTKTFCCLINGYANAGL 386
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 113/230 (49%), Gaps = 14/230 (6%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
+YT LL+SY ++ KA+E++ ++ + +TYN ++ Y S G + + + ++
Sbjct: 392 SYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM 451
Query: 213 KQRNVSPDIFTYNLWISSCAAT---LNIDEVRRILDEMSHGADSNESWTRYLNLANVYVT 269
+Q + P++ + +++C+ + +N+D V + S G + N + Y + Y+
Sbjct: 452 EQDGIKPNVVSVCTLLAACSRSKKKVNVDTV--LSAAQSRGINLNTA--AYNSAIGSYIN 507
Query: 270 ASHLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQ---KM 326
A+ L+ + + + +K++ ++ +T+ LI +G K + + L+ + +
Sbjct: 508 AAELEKAIALYQSMRKKKV-KADSVTFTILI---SGSCRMSKYPEAISYLKEMEDLSIPL 563
Query: 327 INRNYSCIISAYLMLGHVKEVGEVIDQWKNSTIDFDMLACKKIMDAFRAT 376
YS ++ AY G V E + +Q K + + D++A ++ A+ A+
Sbjct: 564 TKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNAS 613
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 106/241 (43%), Gaps = 2/241 (0%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
+Y A+LHS G K + + +Y+++ + + D LTYN +M +G+ +++ +++E+
Sbjct: 224 SYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEM 283
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASH 272
+ SPD++TYN+ + A +L+ M + L + A
Sbjct: 284 VKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMRE-VGVEPGVIHFTTLIDGLSRAGK 342
Query: 273 LDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRNYS 332
L+ + + ET K + Y +I Y G +K ++++ + Q Y+
Sbjct: 343 LE-ACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYN 401
Query: 333 CIISAYLMLGHVKEVGEVIDQWKNSTIDFDMLACKKIMDAFRATGLADIANNLNMILIEK 392
+I + M G KE ++ + ++ + + + +++ + G A+ + ++EK
Sbjct: 402 SMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEK 461
Query: 393 N 393
Sbjct: 462 G 462
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 113/230 (49%), Gaps = 14/230 (6%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
+YT LL+SY ++ KA+E++ ++ + +TYN ++ Y S G + + + ++
Sbjct: 260 SYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM 319
Query: 213 KQRNVSPDIFTYNLWISSCAAT---LNIDEVRRILDEMSHGADSNESWTRYLNLANVYVT 269
+Q + P++ + +++C+ + +N+D V + S G + N + Y + Y+
Sbjct: 320 EQDGIKPNVVSVCTLLAACSRSKKKVNVDTV--LSAAQSRGINLNTA--AYNSAIGSYIN 375
Query: 270 ASHLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQ---KM 326
A+ L+ + + + +K++ ++ +T+ LI +G K + + L+ + +
Sbjct: 376 AAELEKAIALYQSMRKKKV-KADSVTFTILI---SGSCRMSKYPEAISYLKEMEDLSIPL 431
Query: 327 INRNYSCIISAYLMLGHVKEVGEVIDQWKNSTIDFDMLACKKIMDAFRAT 376
YS ++ AY G V E + +Q K + + D++A ++ A+ A+
Sbjct: 432 TKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNAS 481
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/340 (18%), Positives = 146/340 (42%), Gaps = 16/340 (4%)
Query: 65 SATNILHKWVLEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDYAMR 124
SA N+ + +G S+ V + S RY+ A+ + + M EE G + +
Sbjct: 191 SAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKM---EEDGCKPT--LIT 245
Query: 125 IDLMTKVFG--------IDAAERYFEALPVAAKTSETYTALLHSYAGAKMTEKAEELYQR 176
+++ VFG I + ++ +A + TY L+ + ++A ++++
Sbjct: 246 YNVILNVFGKMGTPWNKITSLVEKMKSDGIAPD-AYTYNTLITCCKRGSLHQEAAQVFEE 304
Query: 177 IKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLN 236
+K + S+D +TYN ++ +Y + ++ V+ E+ SP I TYN IS+ A
Sbjct: 305 MKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGM 364
Query: 237 IDEVRRILDEMSHGADSNESWTRYLNLANVYVTASHLDNSSSNSLAETEKRITQSQWITY 296
+DE + ++M+ + +T Y L + + A ++ S+ + E + T+
Sbjct: 365 LDEAMELKNQMAEKGTKPDVFT-YTTLLSGFERAGKVE-SAMSIFEEMRNAGCKPNICTF 422
Query: 297 DFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYLMLGHVKEVGEVIDQWKN 356
+ I +Y G ++ +I++ + + ++ +++ + G EV V + K
Sbjct: 423 NAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR 482
Query: 357 STIDFDMLACKKIMDAFRATGLADIANNLNMILIEKNINP 396
+ + ++ A+ G + A + +++ + P
Sbjct: 483 AGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTP 522
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 16/216 (7%)
Query: 151 SETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVE 210
S +Y LLH + K ++A E +R+ D +TYN M+T G+VE ++
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILN 438
Query: 211 ELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTA 270
+L + SP + TYN I A + ++LDEM D Y +L
Sbjct: 439 QLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM-RAKDLKPDTITYSSLVGGLSRE 497
Query: 271 SHLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRN 330
+D + E E+ + +T++ +++ GL + D+ + L MINR
Sbjct: 498 GKVD-EAIKFFHEFERMGIRPNAVTFNSIML---GLCKSRQTDRAIDFLVF----MINRG 549
Query: 331 -------YSCIISAYLMLGHVKEVGEVIDQWKNSTI 359
Y+ +I G KE E++++ N +
Sbjct: 550 CKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 14/163 (8%)
Query: 155 TALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQ 214
T L+ + T KA ++ + ++ S D +TYN M++ Y G++ SV++ +
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM-- 198
Query: 215 RNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASHLD 274
+VSPD+ TYN + S + + + +LD M D Y + + A+ D
Sbjct: 199 -SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ-RDCYPDVITY----TILIEATCRD 252
Query: 275 NSSSNS---LAETEKRITQSQWITYDFLIILYAGLGSKDKLDQ 314
+ ++ L E R +TY+ L+ G+ + +LD+
Sbjct: 253 SGVGHAMKLLDEMRDRGCTPDVVTYNVLV---NGICKEGRLDE 292
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 134/350 (38%), Gaps = 51/350 (14%)
Query: 91 ELRRSQRYKHALEISEWMITHEEHGLSDSDYAMRIDLMTKVFGI-------DAAERYFEA 143
E + R++ AL+I + + ++H Y R TK+F + D A FE
Sbjct: 117 EAIKENRWQSALKI--FNLLRKQHW-----YEPRCKTYTKLFKVLGNCKQPDQASLLFEV 169
Query: 144 LPVAA--KTSETYTALLHSYAGAKMTEKAEELYQRIKD-SNLSFDALTYNEMMTLYMSVG 200
+ T + YT+L+ Y +++ +KA + +K S+ D T+ +++ +G
Sbjct: 170 MLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLG 229
Query: 201 QVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADS------- 253
+ + V S+V E+ V TYN I +E+ +L +M DS
Sbjct: 230 RFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTL 289
Query: 254 ---------------NESWTRYLNLANVYVTASHLD------------NSSSNSLAETEK 286
ESW L V + + + + EK
Sbjct: 290 NSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEK 349
Query: 287 RITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYLMLGHVKE 346
R +TY+ +I + G +K+D ++ ++ K + Y +++AY G V +
Sbjct: 350 RFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVK 409
Query: 347 VGEVIDQWKNSTIDFDMLACKKIMDAFRATGLADIANNLNMILIEKNINP 396
+ V+ Q NS + D I++A+ G L + + E+ P
Sbjct: 410 IDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKP 459
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 117/277 (42%), Gaps = 21/277 (7%)
Query: 90 KELRRSQRYKHALEISEWMITHEEHGLSDSDYAMRIDLMTKVFGIDAAERYFEAL----- 144
+EL +S ++ LE+ WM + + Y+ I +M K A F +
Sbjct: 105 EELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGC 164
Query: 145 -PVAAKTSETYTALLHSYAGAKMTEKAEELYQRIKD-SNLSFDALTYNEMMTLYMSVGQV 202
P A+ + TA LH+ AK EK ++K + +TYN ++ + G+V
Sbjct: 165 RPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKV 224
Query: 203 EKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLN 262
++V ++ ++L VSPD++T+N + + I E+ +L M SNE +
Sbjct: 225 DQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMR----SNECKPDIIT 280
Query: 263 LANVYVTASHLDNSSSNSLAETEKRITQSQ----WITYDFLIILYAGLGSKDKLDQIWNS 318
NV + S+ + +T K + +S+ T++ +II Y DK + W
Sbjct: 281 F-NVLID-SYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAE--WVF 336
Query: 319 LRMTKQKMINR--NYSCIISAYLMLGHVKEVGEVIDQ 353
+M I Y C+I Y G V E+ ++
Sbjct: 337 KKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEE 373
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 82/180 (45%), Gaps = 6/180 (3%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
TY LL ++A + ++ L++ + S +S D T+N +M Y G ++++ +V+ +
Sbjct: 210 TYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM 269
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASH 272
+ PDI T+N+ I S +++ + + + T + N Y A
Sbjct: 270 RSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIIN-YGKARM 328
Query: 273 LDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGS----KDKLDQIWNSLRMTKQKMIN 328
+D + + S +ITY+ +I++Y GS ++ +++ S R+ K +N
Sbjct: 329 IDKAEWVFKKMNDMNYIPS-FITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLN 387
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 117/277 (42%), Gaps = 21/277 (7%)
Query: 90 KELRRSQRYKHALEISEWMITHEEHGLSDSDYAMRIDLMTKVFGIDAAERYFEAL----- 144
+EL +S ++ LE+ WM + + Y+ I +M K A F +
Sbjct: 105 EELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGC 164
Query: 145 -PVAAKTSETYTALLHSYAGAKMTEKAEELYQRIKD-SNLSFDALTYNEMMTLYMSVGQV 202
P A+ + TA LH+ AK EK ++K + +TYN ++ + G+V
Sbjct: 165 RPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKV 224
Query: 203 EKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLN 262
++V ++ ++L VSPD++T+N + + I E+ +L M SNE +
Sbjct: 225 DQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMR----SNECKPDIIT 280
Query: 263 LANVYVTASHLDNSSSNSLAETEKRITQSQ----WITYDFLIILYAGLGSKDKLDQIWNS 318
NV + S+ + +T K + +S+ T++ +II Y DK + W
Sbjct: 281 F-NVLID-SYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAE--WVF 336
Query: 319 LRMTKQKMINR--NYSCIISAYLMLGHVKEVGEVIDQ 353
+M I Y C+I Y G V E+ ++
Sbjct: 337 KKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEE 373
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 76/167 (45%), Gaps = 2/167 (1%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
TY LL ++A + ++ L++ + S +S D T+N +M Y G ++++ +V+ +
Sbjct: 210 TYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM 269
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASH 272
+ PDI T+N+ I S +++ + + + T + N Y A
Sbjct: 270 RSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIIN-YGKARM 328
Query: 273 LDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSL 319
+D + + S +ITY+ +I++Y GS + +I+ +
Sbjct: 329 IDKAEWVFKKMNDMNYIPS-FITYECMIMMYGYCGSVSRAREIFEEV 374
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 140/303 (46%), Gaps = 34/303 (11%)
Query: 62 PKRSATNIL-HKWVLEGN----SVTVSELRDIAKELRRSQ---------RYKHALEISEW 107
P + NIL H ++G V V EL+D+ ++ +S R + E+ +
Sbjct: 820 PTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKI 879
Query: 108 MITHEEHGLSDSD--YAMRIDLMTKVFGIDAAERYFEALPVAAKTSE--TYTALLHSYAG 163
+ + G + Y M I+L+ K + AE + A E + ++L Y
Sbjct: 880 YSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTA 939
Query: 164 AKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFT 223
+ +K ++YQRIK++ L D TYN ++ +Y + E+ ++++++ + P + T
Sbjct: 940 IEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDT 999
Query: 224 YNLWISSCAATLNIDEVRRILDE-MSHGADSNESWTRYLNLANVYVTASHLD-NSSSNSL 281
Y IS+ +++ ++ +E +S G + S+ Y T + +S S+S
Sbjct: 1000 YKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSF---------YHTMMKISRDSGSDSK 1050
Query: 282 AETEKRITQSQWI-----TYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRNYSCIIS 336
AE ++ ++ I T L++ Y+ G+ + +++ ++L+ T+ ++ YS +I
Sbjct: 1051 AEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVID 1110
Query: 337 AYL 339
AYL
Sbjct: 1111 AYL 1113
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 109/258 (42%), Gaps = 17/258 (6%)
Query: 96 QRYKHALEISEWMITHEEHGLSDSDYAMRIDLMTKVFG-----IDAAERYFEALPVAAKT 150
+ ++ ALE+ EW+ H S A + + V G A E + A P
Sbjct: 169 ESWQRALEVFEWLNLRHWH----SPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDR 224
Query: 151 SETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVE 210
+ Y A++ Y+ + KA+EL ++ D +++N ++ + G + P++
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGL--TPNLAV 282
Query: 211 EL----KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANV 266
EL + + PD TYN +S+C+ N+D ++ ++M + WT Y + +V
Sbjct: 283 ELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWT-YNAMISV 341
Query: 267 YVTASHLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKM 326
Y L + E E + +TY+ L+ +A + +K+ +++ ++
Sbjct: 342 YGRCG-LAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGK 400
Query: 327 INRNYSCIISAYLMLGHV 344
Y+ II Y G +
Sbjct: 401 DEMTYNTIIHMYGKQGQL 418
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 137 AERYFEALPVAA--KTSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMT 194
AER F L + + TY +LL+++A + TEK +E+YQ+++ D +TYN ++
Sbjct: 351 AERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIH 410
Query: 195 LYMSVGQVEKVPSVVEELK---QRNVSPDIFTYNLWISSCAATLNIDEVRRILDEM 247
+Y GQ++ + +++K RN PD TY + I S E ++ EM
Sbjct: 411 MYGKQGQLDLALQLYKDMKGLSGRN--PDAITYTVLIDSLGKANRTVEAAALMSEM 464
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 87/214 (40%), Gaps = 15/214 (7%)
Query: 134 IDAAERYFEALPVAAKTSE--TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNE 191
+D A + FE + + TY A++ Y + +AE L+ ++ DA+TYN
Sbjct: 313 LDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNS 372
Query: 192 MMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGA 251
++ + EKV V +++++ D TYN I +D ++ +M +
Sbjct: 373 LLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLS 432
Query: 252 DSNESWTRY------LNLANVYVTASHLDNSSSNSLAETEKRITQSQWITYDFLIILYAG 305
N Y L AN V A+ L ++E + TY LI YA
Sbjct: 433 GRNPDAITYTVLIDSLGKANRTVEAAAL-------MSEMLDVGIKPTLQTYSALICGYAK 485
Query: 306 LGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYL 339
G +++ + ++ + + K N YS ++ L
Sbjct: 486 AGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLL 519
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 56/98 (57%)
Query: 151 SETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVE 210
++TYT L++ + AEE+++ ++ ++ D +Y ++ + +G ++K S+ +
Sbjct: 592 AKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFD 651
Query: 211 ELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMS 248
E+ + ++P++ YN+ + + I++ + +LDEMS
Sbjct: 652 EMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS 689
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 108/262 (41%), Gaps = 5/262 (1%)
Query: 121 YAMRIDLMTKVFGIDAAERYFEALPVAAKTSET--YTALLHSYAGAKMTEKAEELYQRIK 178
Y + I+ +K+ + A F+ + T Y LL + + EKA+EL +
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS 689
Query: 179 DSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNID 238
L +A+TY ++ Y G + + + +E+K + + PD F Y + C +++
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 749
Query: 239 EVRRILDEMSHG-ADSNESWTRYLNLANVYVTASHLDNSSSNSLAETE-KRITQSQWITY 296
I G A S + +N + + L N L + R + +TY
Sbjct: 750 RAITIFGTNKKGCASSTAPFNALINWVFKF-GKTELKTEVLNRLMDGSFDRFGKPNDVTY 808
Query: 297 DFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYLMLGHVKEVGEVIDQWKN 356
+ +I G+ + ++++ ++ Y+ +++ Y +G E+ V D+
Sbjct: 809 NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868
Query: 357 STIDFDMLACKKIMDAFRATGL 378
+ I+ D + I++AF G+
Sbjct: 869 AGIEPDHIMYSVIINAFLKEGM 890
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 116/268 (43%), Gaps = 5/268 (1%)
Query: 121 YAMRIDLMTKVFGIDAAERYFEALPVAA--KTSETYTALLHSYAGAKMTEKAEELYQRIK 178
Y + + KV ++ A FE + A T TYT L+ A ++A Y+ +
Sbjct: 271 YTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDML 330
Query: 179 DSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSC-AATLNI 237
L+ D + N +M + VG+VE++ +V E+ +P + +YN I + + ++
Sbjct: 331 RDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHV 390
Query: 238 DEVRRILDEMSHGADSNESWTRYLNLANVYVTASHLDNSSSNSLAETEKRITQSQWITYD 297
EV D+M + S +T Y L + Y + ++ + L E +++ Y
Sbjct: 391 SEVSSWFDKMKADSVSPSEFT-YSILIDGYCKTNRVEKALL-LLEEMDEKGFPPCPAAYC 448
Query: 298 FLIILYAGLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYLMLGHVKEVGEVIDQWKNS 357
LI + ++++ L+ + +R Y+ +I + G + E ++ ++ KN
Sbjct: 449 SLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQ 508
Query: 358 TIDFDMLACKKIMDAFRATGLADIANNL 385
D+ A +M G+ + AN+L
Sbjct: 509 GSGPDVYAYNALMSGMVKAGMINEANSL 536
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
TY+AL+ SY + A L+ +KD+ + Y ++ +Y VG+VEK + EE+
Sbjct: 235 TYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEM 294
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEM 247
K+ SP ++TY I +DE +M
Sbjct: 295 KRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDM 329
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 85/191 (44%), Gaps = 18/191 (9%)
Query: 67 TNILHKWVLEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSD--YAMR 124
TN+ + + + TV + K L S+ H E+S W + +S S+ Y++
Sbjct: 358 TNVFSEMGMWRCTPTVVSYNTVIKALFESK--AHVSEVSSWFDKMKADSVSPSEFTYSIL 415
Query: 125 IDLMTKVFGIDAA--------ERYFEALPVAAKTSETYTALLHSYAGAKMTEKAEELYQR 176
ID K ++ A E+ F P A Y +L+++ AK E A EL++
Sbjct: 416 IDGYCKTNRVEKALLLLEEMDEKGFPPCPAA------YCSLINALGKAKRYEAANELFKE 469
Query: 177 IKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLN 236
+K++ + + Y M+ + G++ + + E+K + PD++ YN +S
Sbjct: 470 LKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGM 529
Query: 237 IDEVRRILDEM 247
I+E +L +M
Sbjct: 530 INEANSLLRKM 540
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 71/165 (43%), Gaps = 8/165 (4%)
Query: 155 TALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL-K 213
+ L+ + AKM KA ++ + K + TYN ++ + M GQ EKV V E+
Sbjct: 166 SELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCN 225
Query: 214 QRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASHL 273
+ + PD TY+ ISS D R+ DEM + Y L +Y +
Sbjct: 226 EGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNC-MQPTEKIYTTLLGIYFKVGKV 284
Query: 274 DNSSSNSLAETEKRITQSQWI-TYDFLIILYAGLGSKDKLDQIWN 317
+ + L E KR S + TY LI GLG ++D+ +
Sbjct: 285 EKAL--DLFEEMKRAGCSPTVYTYTELI---KGLGKAGRVDEAYG 324
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 138/326 (42%), Gaps = 13/326 (3%)
Query: 76 EGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDYAMRIDLM--TKVFG 133
+G S V + L + +Y+ A E+ M+ GLS R LM K
Sbjct: 299 KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML---RSGLSPDSTTYRSLLMEACKKGD 355
Query: 134 IDAAERYFEALPVAAKTSE--TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNE 191
+ E+ F + + +++++ + + +KA + +K++ L D + Y
Sbjct: 356 VVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTI 415
Query: 192 MMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGA 251
++ Y G + ++ E+ Q+ + D+ TYN + + E ++ +EM+ A
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERA 475
Query: 252 DSNESWTRYLNLANVYVTASHLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDK 311
+S+T + L + + +L N+ EKRI + +TY+ L+ + +G D
Sbjct: 476 LFPDSYTLTI-LIDGHCKLGNLQNAMELFQKMKEKRI-RLDVVTYNTLLDGFGKVGDIDT 533
Query: 312 LDQIWNSLRMTKQKMINRNYSCIISAYLMLGHVKEVGEVIDQWKNSTIDFDMLACKKIMD 371
+IW + + +YS +++A GH+ E V D+ + I ++ C ++
Sbjct: 534 AKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIK 593
Query: 372 AFRATGLADIANNLNMILIEKNINPG 397
+ +G A + +EK I+ G
Sbjct: 594 GYCRSGNASDGES----FLEKMISEG 615
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 78/167 (46%), Gaps = 2/167 (1%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
TY+ ++ S+ + AE+L + + + ++ D +T++ ++ + G+V + + ++
Sbjct: 113 TYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDM 172
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASH 272
+R + P TYN I +++ +R+LD M+ + S + T + L N Y A
Sbjct: 173 LRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVT-FSTLINGYCKAKR 231
Query: 273 LDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSL 319
+DN E +R + +TY LI + +G D + N +
Sbjct: 232 VDNGME-IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVM 277
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 98/222 (44%), Gaps = 17/222 (7%)
Query: 136 AAERYFEALPVAAKTSET--------YTALLHSYAGAKMTEKAEELYQRIKDSNLSFDAL 187
+ER EAL + + ET YT L+ S EKA EL ++ + L + +
Sbjct: 335 GSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVI 394
Query: 188 TYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEM 247
TYN ++ Y G +E VVE ++ R +SP+ TYN I + N+ + +L++M
Sbjct: 395 TYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKM 453
Query: 248 SHGADSNESWTRYLNLANVYVTASHLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLG 307
+ T Y +L + + + D++ ++ + QW TY +I L
Sbjct: 454 LERKVLPDVVT-YNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQW-TYTSMI---DSLC 508
Query: 308 SKDKLDQIWNSLRMTKQKMINRN---YSCIISAYLMLGHVKE 346
++++ + +QK +N N Y+ +I Y G V E
Sbjct: 509 KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDE 550
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 59/125 (47%), Gaps = 3/125 (2%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
Y LL+S A + ++ +++Y + + + + TYN+M+ Y +G VE+ V ++
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMS-HGADSNESWTRYLNLANVYVTAS 271
+ + PD FTY I ++D ++ +EM G NE Y +L + A
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNE--VAYTHLIHGLCVAR 302
Query: 272 HLDNS 276
+D +
Sbjct: 303 RIDEA 307
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 89/199 (44%), Gaps = 13/199 (6%)
Query: 121 YAMRIDLMTKVFGIDAAERYFEALPVAAKTSE--TYTALLHSYAGAKMTEKAEELYQRIK 178
+ + ID K +D A + + + ++ YT+L+ + ++ + L+ +
Sbjct: 215 WGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVL 274
Query: 179 DSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNID 238
+ S A+TYN ++ + +GQ+++ + E + +R V P+++TY I
Sbjct: 275 ERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTK 334
Query: 239 EVRRILDEMSHGADSNESWTRYLNLANVYVTASHLDNSSSNSLAETE---KRITQSQWIT 295
E ++L+ M D + Y N+ + D ++++ E KR T+ IT
Sbjct: 335 EALQLLNLMIE-KDEEPNAVTY----NIIINKLCKDGLVADAVEIVELMKKRRTRPDNIT 389
Query: 296 YDFLIILYAGLGSKDKLDQ 314
Y+ IL GL +K LD+
Sbjct: 390 YN---ILLGGLCAKGDLDE 405
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 90/199 (45%), Gaps = 17/199 (8%)
Query: 148 AKTSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPS 207
+ S+TYTA++ + M A+ L +++ S L YN +++ G +++
Sbjct: 491 VRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWR 550
Query: 208 VVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVY 267
+ EE+++ N PD+ ++N+ I +I +L MS S + +T Y L N +
Sbjct: 551 LFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFT-YSKLINRF 609
Query: 268 VTASHLDNSSS------NSLAETEKRITQSQWITYDFLIILYA-GLGSKDKLDQIWNSLR 320
+ +LD + S +S E + I S ++ Y G DKL ++ L
Sbjct: 610 LKLGYLDEAISFFDKMVDSGFEPDAHICDS--------VLKYCISQGETDKLTELVKKL- 660
Query: 321 MTKQKMINRNYSCIISAYL 339
+ K ++++ +C + Y+
Sbjct: 661 VDKDIVLDKELTCTVMDYM 679
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 100/236 (42%), Gaps = 41/236 (17%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
TYT L+ G T++A +L + + + +A+TYN ++ G V +VE +
Sbjct: 319 TYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELM 378
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASH 272
K+R PD TYN+ + A ++DE ++L YL L + T
Sbjct: 379 KKRRTRPDNITYNILLGGLCAKGDLDEASKLL---------------YLMLKDSSYTDP- 422
Query: 273 LDNSSSNSLAE---TEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINR 329
D S N+L E R+ Q+ I YD L+ LG+ D R+T ++N
Sbjct: 423 -DVISYNALIHGLCKENRLHQALDI-YDLLV---EKLGAGD---------RVTTNILLN- 467
Query: 330 NYSCIISAYLMLGHVKEVGEVIDQWKNSTIDFDMLACKKIMDAFRATGLADIANNL 385
+ L G V + E+ Q +S I + ++D F TG+ ++A L
Sbjct: 468 -------STLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGL 516
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/244 (18%), Positives = 101/244 (41%), Gaps = 2/244 (0%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
+ + LL Y + T A + + +F+ +N ++ + K S++ E+
Sbjct: 109 SLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREM 168
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASH 272
++ ++ PD+F+YN I +++ + +EM G+ + S + L + + A
Sbjct: 169 RRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM-KGSGCSWSLVTWGILIDAFCKAGK 227
Query: 273 LDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRNYS 332
+D + L E + ++ + Y LI + G D+ +++ + Y+
Sbjct: 228 MD-EAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYN 286
Query: 333 CIISAYLMLGHVKEVGEVIDQWKNSTIDFDMLACKKIMDAFRATGLADIANNLNMILIEK 392
+I + LG +KE E+ + + ++ ++D G A L ++IEK
Sbjct: 287 TLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK 346
Query: 393 NINP 396
+ P
Sbjct: 347 DEEP 350
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 100/239 (41%), Gaps = 2/239 (0%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
+Y ++ + K EKA EL +K S S+ +T+ ++ + G++++ ++E+
Sbjct: 179 SYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEM 238
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASH 272
K + D+ Y I +D + + DE+ DS + T Y L +
Sbjct: 239 KFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAIT-YNTLIRGFCKLGQ 297
Query: 273 LDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRNYS 332
L +S E+ + + + TY LI G+G + Q+ N + ++ Y+
Sbjct: 298 LKEASEIFEFMIERGVRPNVY-TYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYN 356
Query: 333 CIISAYLMLGHVKEVGEVIDQWKNSTIDFDMLACKKIMDAFRATGLADIANNLNMILIE 391
II+ G V + E+++ K D + ++ A G D A+ L ++++
Sbjct: 357 IIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLK 415
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 84/194 (43%), Gaps = 2/194 (1%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
TYT ++ YA T KA E + R+++ L D TY ++ G+++ +V +E+
Sbjct: 661 TYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM 720
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASH 272
RN+ + F YN+ I A ++ E ++ +M + T Y + + A
Sbjct: 721 SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHT-YTSFISACSKAGD 779
Query: 273 LDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRNYS 332
+ N ++ ++ E E + TY LI +A +K + ++ K Y
Sbjct: 780 M-NRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYH 838
Query: 333 CIISAYLMLGHVKE 346
C++++ L + E
Sbjct: 839 CLLTSLLSRASIAE 852
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 111/248 (44%), Gaps = 9/248 (3%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
Y L+H+ + + EKAE+L +++ + D TYN ++++Y + SV + +
Sbjct: 205 VYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRM 264
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASH 272
++ V+P+I TYN +I + + E R+ E+ +N Y L + Y +
Sbjct: 265 ERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANH--VTYTTLIDGYCRMND 322
Query: 273 LDNSSSNSLAET-EKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRNY 331
+D + L E E R +TY+ ++ G + +++ M+ +K+ N
Sbjct: 323 IDEAL--RLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLT--EMSGKKIEPDNI 378
Query: 332 SC--IISAYLMLGHVKEVGEVIDQWKNSTIDFDMLACKKIMDAFRATGLADIANNLNMIL 389
+C +I+AY + + +V + S + DM + K ++ F + A +
Sbjct: 379 TCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSM 438
Query: 390 IEKNINPG 397
IEK +PG
Sbjct: 439 IEKGFSPG 446
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 132/337 (39%), Gaps = 34/337 (10%)
Query: 62 PKRSATNILHKWVLEGNSV-TVSELRD----------------IAKELRRSQRYKHALEI 104
P S NIL + + T ELRD + L +SQ+ A +
Sbjct: 375 PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAM 434
Query: 105 SEWMITHEEHGLSDSD---YAMRIDLMTKVFGIDAAERYFEA-LPVAAKT-SETYTALLH 159
E M ++ + D + ID + KV +D A + +E L +T S YT+L+
Sbjct: 435 FEEM----DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIK 490
Query: 160 SYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSP 219
++ E ++Y+ + + N S D N M G+ EK ++ EE+K R P
Sbjct: 491 NFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVP 550
Query: 220 DIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASHLDNSSSN 279
D +Y++ I +E + M + TR N+ N +
Sbjct: 551 DARSYSILIHGLIKAGFANETYELFYSMKEQGCVLD--TRAYNIVIDGFCKCGKVNKAYQ 608
Query: 280 SLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRN---YSCIIS 336
L E + + + +TY +I GL D+LD+ + K K I N YS +I
Sbjct: 609 LLEEMKTKGFEPTVVTYGSVI---DGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 665
Query: 337 AYLMLGHVKEVGEVIDQWKNSTIDFDMLACKKIMDAF 373
+ +G + E ++++ + ++ ++DA
Sbjct: 666 GFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDAL 702
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 102/270 (37%), Gaps = 43/270 (15%)
Query: 125 IDLMTKVFGIDAAERYFEALPVA--AKTSETYTALLHSYAGAKMTEKAEELYQRIKDSNL 182
+D M K + FE + + +Y+ L+H A + EL+ +K+
Sbjct: 524 MDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGC 583
Query: 183 SFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAAT-------- 234
D YN ++ + G+V K ++EE+K + P + TY I A
Sbjct: 584 VLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYM 643
Query: 235 -----------LN----------------IDEVRRILDE-MSHGADSN-ESWTRYLNLAN 265
LN IDE IL+E M G N +W +L +
Sbjct: 644 LFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWN---SLLD 700
Query: 266 VYVTASHLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQK 325
V A ++ + + E + T +Q +TY LI + +K W ++ K
Sbjct: 701 ALVKAEEINEALVCFQSMKELKCTPNQ-VTYGILINGLCKVRKFNKAFVFWQEMQKQGMK 759
Query: 326 MINRNYSCIISAYLMLGHVKEVGEVIDQWK 355
+Y+ +IS G++ E G + D++K
Sbjct: 760 PSTISYTTMISGLAKAGNIAEAGALFDRFK 789
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 4/158 (2%)
Query: 121 YAMRIDLMTKVFGIDAAERYFEALPV-AAKTSE-TYTALLHSYAGAKMTEKAEELYQRIK 178
Y + ID KV +D A ++F + K E TYT+++ A ++A E+++ ++
Sbjct: 241 YNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLE 300
Query: 179 DSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNID 238
+ YN M+ Y S G+ ++ S++E + + P + YN ++ +D
Sbjct: 301 KNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVD 360
Query: 239 EVRRILDEMSHGADSNESWTRYLNLANVYVTASHLDNS 276
E ++ +EM A N S Y L ++ A LD +
Sbjct: 361 EALKVFEEMKKDAAPNLS--TYNILIDMLCRAGKLDTA 396
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 93/206 (45%), Gaps = 10/206 (4%)
Query: 154 YTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELK 213
YT L+ +++ ++ L+Q++++ + ++ + G+V+ S+++E+K
Sbjct: 171 YTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMK 230
Query: 214 QRNVSPDIFTYNLWISSCAATLNIDEVRRILDEM-SHGADSNESWTRYLNLANVYVTASH 272
++ DI YN+ I S +D + E+ ++G +E Y ++ V A+
Sbjct: 231 SSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDE--VTYTSMIGVLCKANR 288
Query: 273 LDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRN-- 330
LD + EK Y+ +I+ G GS K D+ ++ L + K +
Sbjct: 289 LD-EAVEMFEHLEKNRRVPCTYAYNTMIM---GYGSAGKFDEAYSLLERQRAKGSIPSVI 344
Query: 331 -YSCIISAYLMLGHVKEVGEVIDQWK 355
Y+CI++ +G V E +V ++ K
Sbjct: 345 AYNCILTCLRKMGKVDEALKVFEEMK 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 91/217 (41%), Gaps = 14/217 (6%)
Query: 107 WMITHE--EHGLSDSD--YAMRIDLMTKVFGIDAAERYFEALPVAAKTSETYT--ALLHS 160
W HE +GL + Y I ++ K +D A FE L + TY ++
Sbjct: 258 WKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMG 317
Query: 161 YAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPD 220
Y A ++A L +R + + YN ++T +G+V++ V EE+K ++ +P+
Sbjct: 318 YGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPN 376
Query: 221 IFTYNLWISSCAATLNIDEVRRILDEMSH-GADSNESWTRYLNLANVYVTASHLDNSSSN 279
+ TYN+ I +D + D M G N R +N+ + S + +
Sbjct: 377 LSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPN---VRTVNIMVDRLCKSQKLDEACA 433
Query: 280 SLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIW 316
E + ++ IT+ LI GLG ++D +
Sbjct: 434 MFEEMDYKVCTPDEITFCSLI---DGLGKVGRVDDAY 467
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 9/138 (6%)
Query: 152 ETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEE 211
+TY ++ Y +KA E++ + S L D Y M+ Y G++ + S+ E
Sbjct: 810 QTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSE 869
Query: 212 LKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTAS 271
++++ + P +YN+ + CA + EV +L M + T YL L VY
Sbjct: 870 MQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLST-YLTLIQVY---- 924
Query: 272 HLDNSSSNSLAETEKRIT 289
+ S+ AE EK IT
Sbjct: 925 ----AESSQFAEAEKTIT 938
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 93/200 (46%), Gaps = 8/200 (4%)
Query: 106 EWMITHEEHGLSDSD--YAMRIDLMTKVFGIDAA-ERYFEALPVAAKTSE-TYTALLHSY 161
+ +I E G S + Y ID K I+ A + +FE + +E TYT L++
Sbjct: 184 DLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGL 243
Query: 162 AGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDI 221
+ ++ E+Y+++++ + + TYN +M G+ + V +E+++R VS +I
Sbjct: 244 FKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNI 303
Query: 222 FTYNLWISSCAATLNIDEVRRILDEM-SHGADSNESWTRYLNLANVYVTASHLDNSSSNS 280
TYN I + ++E +++D+M S G + N Y L + + L + S
Sbjct: 304 VTYNTLIGGLCREMKLNEANKVVDQMKSDGINPN--LITYNTLIDGFCGVGKLGKALS-L 360
Query: 281 LAETEKRITQSQWITYDFLI 300
+ + R +TY+ L+
Sbjct: 361 CRDLKSRGLSPSLVTYNILV 380
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/247 (18%), Positives = 116/247 (46%), Gaps = 7/247 (2%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
TY+A+L Y+ + E+ LY+R + DA+ ++ + ++ G + + V++E+
Sbjct: 258 TYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEM 317
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEM-SHGADSNESWTRYLNLANVYVTAS 271
K +V P++ YN + + R + +EM G NE L +Y A
Sbjct: 318 KSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEK--TLTALVKIYGKA- 374
Query: 272 HLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQ-KMINRN 330
+ E + + +I Y+ L+ + A +G +++ ++++N ++ + Q + N +
Sbjct: 375 RWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFS 434
Query: 331 YSCIISAYLMLGHVKEVGEVIDQWKNSTIDFDMLACKKIMDAF-RATGLADIANNLNMIL 389
Y+ +++ Y G ++ E+ ++ + + +++ C ++ +A + D+ ++
Sbjct: 435 YTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLS- 493
Query: 390 IEKNINP 396
I++ + P
Sbjct: 494 IKRGVKP 500
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%)
Query: 148 AKTSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPS 207
+ S TYT+L+ + E+A+ L++ ++ L + Y ++ Y +GQ+ KV
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 736
Query: 208 VVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWT 258
++ E+ +NV P+ TY + I A N+ E R+L+EM +S T
Sbjct: 737 LLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSIT 787
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 82/195 (42%), Gaps = 4/195 (2%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
TY+ ++ A+ TE+ +E + + N+ + + YN ++ Y G++ + E++
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMS-HGADSNESWTRYLNLANVYVTAS 271
K + +SP+ TY I + ++E + + +EM G + N Y L + Y
Sbjct: 672 KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN--VFHYTALIDGYGKLG 729
Query: 272 HLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRNY 331
+ L E + ITY +I YA G+ + ++ N +R + Y
Sbjct: 730 QMVKVEC-LLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Query: 332 SCIISAYLMLGHVKE 346
I YL G V E
Sbjct: 789 KEFIYGYLKQGGVLE 803
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 4/171 (2%)
Query: 94 RSQRYKHALEISEWMITHEEHGLSDSDYAMRIDLMTKVFGIDAAERYFEALPVAAKTSET 153
RS R ALE+ E M H+ + + Y I M+ + ++ A+ FE + +
Sbjct: 657 RSGRLSMALELREDM-KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNV 715
Query: 154 --YTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEE 211
YTAL+ Y K E L + + N+ + +TY M+ Y G V + ++ E
Sbjct: 716 FHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNE 775
Query: 212 LKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLN 262
++++ + PD TY +I + E + DE ++ A E W + +
Sbjct: 776 MREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAAII-EGWNKLIQ 825
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%)
Query: 148 AKTSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPS 207
+ S TYT+L+ + E+A+ L++ ++ L + Y ++ Y +GQ+ KV
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 736
Query: 208 VVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWT 258
++ E+ +NV P+ TY + I A N+ E R+L+EM +S T
Sbjct: 737 LLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSIT 787
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 82/195 (42%), Gaps = 4/195 (2%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
TY+ ++ A+ TE+ +E + + N+ + + YN ++ Y G++ + E++
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMS-HGADSNESWTRYLNLANVYVTAS 271
K + +SP+ TY I + ++E + + +EM G + N Y L + Y
Sbjct: 672 KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN--VFHYTALIDGYGKLG 729
Query: 272 HLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRNY 331
+ L E + ITY +I YA G+ + ++ N +R + Y
Sbjct: 730 QMVKVEC-LLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Query: 332 SCIISAYLMLGHVKE 346
I YL G V E
Sbjct: 789 KEFIYGYLKQGGVLE 803
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 4/171 (2%)
Query: 94 RSQRYKHALEISEWMITHEEHGLSDSDYAMRIDLMTKVFGIDAAERYFEALPVAAKTSET 153
RS R ALE+ E M H+ + + Y I M+ + ++ A+ FE + +
Sbjct: 657 RSGRLSMALELREDM-KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNV 715
Query: 154 --YTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEE 211
YTAL+ Y K E L + + N+ + +TY M+ Y G V + ++ E
Sbjct: 716 FHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNE 775
Query: 212 LKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLN 262
++++ + PD TY +I + E + DE ++ A E W + +
Sbjct: 776 MREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAAII-EGWNKLIQ 825
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
Query: 142 EALPVAAKTSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQ 201
+A ++AKT+ T +++ + A + T +AE L++ ++ S + YN ++ Y+ G
Sbjct: 296 QATGLSAKTA-TLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGP 354
Query: 202 VEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHG 250
++ S+V E+++R VSPD TY+L I + + R +L EM G
Sbjct: 355 LKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAG 403
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 77/167 (46%), Gaps = 2/167 (1%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
TY ++ S+ + A++L + + + ++ D +T++ ++ ++ +V + + +E+
Sbjct: 47 TYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEM 106
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASH 272
+ ++ P TYN I +D+ +R+LD M+ S + T + L N Y A
Sbjct: 107 LRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVT-FSTLINGYCKAKR 165
Query: 273 LDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSL 319
+DN E +R + +TY LI + +G D + N +
Sbjct: 166 VDNGME-IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM 211
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 75/160 (46%), Gaps = 5/160 (3%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
T++AL++++ + +AEE+Y+ + ++ +TYN M+ + +V+ +++ +
Sbjct: 82 TFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSM 141
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASH 272
+ SPD+ T++ I+ +D I EM H + Y L + +
Sbjct: 142 ASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM-HRRGIVANTVTYTTLIHGFCQVGD 200
Query: 273 LDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKL 312
LD ++ + L E +IT+ ++ AGL SK +L
Sbjct: 201 LD-AAQDLLNEMISCGVAPDYITFHCML---AGLCSKKEL 236
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 100/235 (42%), Gaps = 7/235 (2%)
Query: 164 AKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFT 223
K+ E E + I+ L D + Y ++ + G + E+ R+++PD+ T
Sbjct: 330 CKLAEAEEAFSEMIRQGILP-DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLT 388
Query: 224 YNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASHLDNS--SSNSL 281
Y IS ++ E ++ EM +S T + L N Y A H+ ++ N +
Sbjct: 389 YTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT-FTELINGYCKAGHMKDAFRVHNHM 447
Query: 282 AETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYLML 341
+ +TY LI G D +++ + + + Y+ I++
Sbjct: 448 IQAG---CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 342 GHVKEVGEVIDQWKNSTIDFDMLACKKIMDAFRATGLADIANNLNMILIEKNINP 396
G+++E +++ +++ + ++ D + +MDA+ +G D A + ++ K + P
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 559
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 134/310 (43%), Gaps = 24/310 (7%)
Query: 75 LEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDS--DYAMRIDLMTKVF 132
LE +SVT +EL ++ K A + MI + G S + Y ID + K
Sbjct: 417 LEPDSVTFTEL---INGYCKAGHMKDAFRVHNHMI---QAGCSPNVVTYTTLIDGLCKEG 470
Query: 133 GIDAA-ERYFEALPVAAKTS-ETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYN 190
+D+A E E + + + TY ++++ + E+A +L + + L+ D +TY
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530
Query: 191 EMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEM-SH 249
+M Y G+++K +++E+ + + P I T+N+ ++ +++ ++L+ M +
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 590
Query: 250 GADSNESWTRYLNLANVYVTASHLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSK 309
G N T + +L Y ++L +++ + R TY+ L+ G
Sbjct: 591 GIAPNA--TTFNSLVKQYCIRNNL-KAATAIYKDMCSRGVGPDGKTYENLV---KGHCKA 644
Query: 310 DKLDQIWNSLRMTKQKMIN---RNYSCIISAYLMLGHVKEVGEVIDQWKNSTIDFDMLAC 366
+ + W + K K + YS +I +L E EV DQ + + D
Sbjct: 645 RNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD---- 700
Query: 367 KKIMDAFRAT 376
K+I D F T
Sbjct: 701 KEIFDFFSDT 710
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 99/236 (41%), Gaps = 5/236 (2%)
Query: 121 YAMRIDLMTKVFGIDAAERYFEALPVAAKTSE--TYTALLHSYAGAKMTEKAEELYQRIK 178
Y ID K I AA ++F + T + TYTA++ + +A +L+ +
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 179 DSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNID 238
L D++T+ E++ Y G ++ V + Q SP++ TY I ++D
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 239 EVRRILDEMSHGADSNESWTRYLNLANVYVTASHLDNSSSNSLAETEKRITQSQWITYDF 298
+L EM +T Y ++ N + +++ + + E E + +TY
Sbjct: 474 SANELLHEMWKIGLQPNIFT-YNSIVNGLCKSGNIE-EAVKLVGEFEAAGLNADTVTYTT 531
Query: 299 LIILYAGLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYLMLGHVKEVGEVIDQW 354
L+ Y G DK +I + + ++ +++ + + G +++ GE + W
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED-GEKLLNW 586
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 100/235 (42%), Gaps = 7/235 (2%)
Query: 164 AKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFT 223
K+ E E + I+ L D + Y ++ + G + E+ R+++PD+ T
Sbjct: 330 CKLAEAEEAFSEMIRQGILP-DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLT 388
Query: 224 YNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASHLDNS--SSNSL 281
Y IS ++ E ++ EM +S T + L N Y A H+ ++ N +
Sbjct: 389 YTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT-FTELINGYCKAGHMKDAFRVHNHM 447
Query: 282 AETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYLML 341
+ +TY LI G D +++ + + + Y+ I++
Sbjct: 448 IQAG---CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 342 GHVKEVGEVIDQWKNSTIDFDMLACKKIMDAFRATGLADIANNLNMILIEKNINP 396
G+++E +++ +++ + ++ D + +MDA+ +G D A + ++ K + P
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 559
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 134/310 (43%), Gaps = 24/310 (7%)
Query: 75 LEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDS--DYAMRIDLMTKVF 132
LE +SVT +EL ++ K A + MI + G S + Y ID + K
Sbjct: 417 LEPDSVTFTEL---INGYCKAGHMKDAFRVHNHMI---QAGCSPNVVTYTTLIDGLCKEG 470
Query: 133 GIDAA-ERYFEALPVAAKTS-ETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYN 190
+D+A E E + + + TY ++++ + E+A +L + + L+ D +TY
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530
Query: 191 EMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEM-SH 249
+M Y G+++K +++E+ + + P I T+N+ ++ +++ ++L+ M +
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 590
Query: 250 GADSNESWTRYLNLANVYVTASHLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSK 309
G N T + +L Y ++L +++ + R TY+ L+ G
Sbjct: 591 GIAPNA--TTFNSLVKQYCIRNNL-KAATAIYKDMCSRGVGPDGKTYENLV---KGHCKA 644
Query: 310 DKLDQIWNSLRMTKQKMIN---RNYSCIISAYLMLGHVKEVGEVIDQWKNSTIDFDMLAC 366
+ + W + K K + YS +I +L E EV DQ + + D
Sbjct: 645 RNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD---- 700
Query: 367 KKIMDAFRAT 376
K+I D F T
Sbjct: 701 KEIFDFFSDT 710
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 99/236 (41%), Gaps = 5/236 (2%)
Query: 121 YAMRIDLMTKVFGIDAAERYFEALPVAAKTSE--TYTALLHSYAGAKMTEKAEELYQRIK 178
Y ID K I AA ++F + T + TYTA++ + +A +L+ +
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 179 DSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNID 238
L D++T+ E++ Y G ++ V + Q SP++ TY I ++D
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 239 EVRRILDEMSHGADSNESWTRYLNLANVYVTASHLDNSSSNSLAETEKRITQSQWITYDF 298
+L EM +T Y ++ N + +++ + + E E + +TY
Sbjct: 474 SANELLHEMWKIGLQPNIFT-YNSIVNGLCKSGNIE-EAVKLVGEFEAAGLNADTVTYTT 531
Query: 299 LIILYAGLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYLMLGHVKEVGEVIDQW 354
L+ Y G DK +I + + ++ +++ + + G +++ GE + W
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED-GEKLLNW 586
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 99/223 (44%), Gaps = 10/223 (4%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
TY+ L++SY AK + L++ I L + +TYN ++ + G++ + +E+
Sbjct: 387 TYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 446
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYV---- 268
R V P + TY + + +++ I ++M T + + N+ +
Sbjct: 447 VSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK-----SRMTLGIGIYNIIIHGMC 501
Query: 269 TASHLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMIN 328
AS +D++ S + ++K + + +TY+ +I GS + D ++ ++ +
Sbjct: 502 NASKVDDAWSLFCSLSDKGV-KPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 560
Query: 329 RNYSCIISAYLMLGHVKEVGEVIDQWKNSTIDFDMLACKKIMD 371
Y+ +I A+L + E+I++ K D K ++D
Sbjct: 561 FTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID 603
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 100/224 (44%), Gaps = 20/224 (8%)
Query: 144 LP-VAAKTSETYTALLHSY-AGAKMTEKAE--ELYQRIKDSNLSFDALTYNEMMTLYMSV 199
LP V A S YT L+ Y ++ + A E +R D N D +TY +++ +++
Sbjct: 406 LPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNA 465
Query: 200 GQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTR 259
G +++ V+ E+ + V + TYN+ + L ID +L EM+ A
Sbjct: 466 GLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVS 525
Query: 260 YLNLANVYVTASHLDNSSSNSLA---ETEKRITQSQWITYDFLIILYAGLGSKDKL---- 312
Y N+ + L + S+ +LA E R I+Y L+ +A + + KL
Sbjct: 526 Y----NIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFA-MSGQPKLANRV 580
Query: 313 -DQIWNSLRMTKQKMINRNYSCIISAYLMLGHVKEVGEVIDQWK 355
D++ N R+ K +I N ++ Y LG +++ V+ + K
Sbjct: 581 FDEMMNDPRV-KVDLIAWNM--LVEGYCRLGLIEDAQRVVSRMK 621
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 139/319 (43%), Gaps = 14/319 (4%)
Query: 85 LRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDYAMRIDL--MTKVFGIDAAERYFE 142
+R + L R ++ +L + +W+ HEE + S +A + L + + D A F+
Sbjct: 122 IRFMVSLLSRENDWQRSLALLDWV--HEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFD 179
Query: 143 ALPVAAKTSE--TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVG 200
+ A + TY+ L+ S+ M + A Q+++ +S D + Y+ ++ L +
Sbjct: 180 EMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLC 239
Query: 201 QVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRY 260
K S+ LK+ ++PD+ YN I+ E R ++ EM+ A + Y
Sbjct: 240 DYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNE-AGVLPNTVSY 298
Query: 261 LNLANVYVTASHLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLR 320
L +VYV +H + + AE ++ T + +I +Y L + D+++ SLR
Sbjct: 299 STLLSVYV-ENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLR 357
Query: 321 MTKQKMINRNYSCIISAYLMLGHVKEVGEVIDQWK---NSTIDFDMLACKKIMDAFRATG 377
+ +Y+ I+ Y G + GE I ++ I+ +++ ++ + T
Sbjct: 358 KMDIEPNVVSYNTILRVY---GEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTM 414
Query: 378 LADIANNLNMILIEKNINP 396
+ A NL + + I P
Sbjct: 415 EHEKATNLVQEMQSRGIEP 433
>AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:13116547-13118059 FORWARD
LENGTH=452
Length = 452
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 78/159 (49%), Gaps = 4/159 (2%)
Query: 97 RYKHALEISEWMITHEEH--GLSDSDYAMRIDLMTKVFGIDAAERYF-EALPVAAKTSET 153
R+ AL++ EW +++ L+ +YA I + + I+ A F EA +T+
Sbjct: 81 RHYLALQVLEWRRGQKDYCIPLTSEEYAKGIKIAGRARDINLAVYLFDEAAKKRMQTASV 140
Query: 154 YTALLHSYAGAKMTEKAEELYQRIK-DSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
Y +L+ Y + E+ + L++ + ++ + +TYN ++++Y + V+ + + EEL
Sbjct: 141 YNSLMSVYMWNGLAEECQSLFKDFRRQTHCAPTVVTYNILVSVYGRLLMVKNMEAAFEEL 200
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGA 251
++ + P+ TYN I+ N D++ EM G
Sbjct: 201 QKVKLPPNSVTYNFLIAGYMTAWNWDKMEATFQEMKRGP 239
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/293 (19%), Positives = 122/293 (41%), Gaps = 26/293 (8%)
Query: 91 ELRRSQRYKHALEISEWMI-THEEHGLSDSDYAMRIDLMTKVFGIDAAERYFEALPVAAK 149
EL RSQ K +++ +I T+ ++ + D + M ++FG + A R
Sbjct: 67 ELIRSQECKCDEDVALSVIKTYGKNSMPDQALDV-FKRMREIFGCEPAIR---------- 115
Query: 150 TSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVV 209
+Y LL+++ AK K E L+ + + ++ + TYN ++ + + EK +
Sbjct: 116 ---SYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFL 172
Query: 210 EELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVT 269
+ + + PD+F+Y+ I+ A +D+ + DEMS + + + N+ +
Sbjct: 173 DWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPD-----VTCYNILID 227
Query: 270 ASHLDNSSSNSLAETEKRITQSQWI-----TYDFLIILYAGLGSKDKLDQIWNSLRMTKQ 324
L + E R+ + + T++ +I + G D +IW ++ ++
Sbjct: 228 G-FLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNER 286
Query: 325 KMINRNYSCIISAYLMLGHVKEVGEVIDQWKNSTIDFDMLACKKIMDAFRATG 377
+ YS +I G+V + V ++ D++ ++ F G
Sbjct: 287 EKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCG 339
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 103/242 (42%), Gaps = 3/242 (1%)
Query: 156 ALLHSYAGAKMTEKAEELY-QRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQ 214
AL+ A+ + A E+ + IK + + + YN +++ + G++EK ++ + +
Sbjct: 189 ALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSK 248
Query: 215 RNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASHLD 274
PD+ TYN+ ++ + ++ EM ++++ Y L + SH D
Sbjct: 249 IGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYS-YNQLLKRHCRVSHPD 307
Query: 275 NSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRNYSCI 334
+ + E E R ++Y LI + + K +++ +R M Y+ +
Sbjct: 308 KCYNFMVKEMEPR-GFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSL 366
Query: 335 ISAYLMLGHVKEVGEVIDQWKNSTIDFDMLACKKIMDAFRATGLADIANNLNMILIEKNI 394
I A+L G+ +++DQ + D + I+D +G D A + +IE I
Sbjct: 367 IKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEI 426
Query: 395 NP 396
P
Sbjct: 427 TP 428
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 66/124 (53%), Gaps = 10/124 (8%)
Query: 134 IDAAERYFEALPVAAKTSET--------YTALLHSYAGAKMTEKAEELYQ-RIKDSNLSF 184
++A + + EAL VA + + Y L+H+ A A E+AE +++ + + +S
Sbjct: 304 LNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSI 363
Query: 185 DALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVS-PDIFTYNLWISSCAATLNIDEVRRI 243
+ TYN M+ +Y + +K +++E++ N+ PD+ TY + SC ++ EV ++
Sbjct: 364 NTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKL 423
Query: 244 LDEM 247
L EM
Sbjct: 424 LKEM 427
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 66/124 (53%), Gaps = 10/124 (8%)
Query: 134 IDAAERYFEALPVAAKTSET--------YTALLHSYAGAKMTEKAEELYQ-RIKDSNLSF 184
++A + + EAL VA + + Y L+H+ A A E+AE +++ + + +S
Sbjct: 304 LNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSI 363
Query: 185 DALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVS-PDIFTYNLWISSCAATLNIDEVRRI 243
+ TYN M+ +Y + +K +++E++ N+ PD+ TY + SC ++ EV ++
Sbjct: 364 NTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKL 423
Query: 244 LDEM 247
L EM
Sbjct: 424 LKEM 427
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 113/254 (44%), Gaps = 22/254 (8%)
Query: 121 YAMRIDLMTKVFGIDAAERYFEALPVAAKTSET--YTALLHSYAGAKMTEKAEELYQRIK 178
Y++ ID + K +D A F + + ++ YT L+ + A + +L + +
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 179 DSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNID 238
++ D + ++ ++ ++ G++ + + +E+ QR +SPD TY I +D
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 239 EVRRILDEM-SHGADSNESWTRYLN-LANVYVTASHLDNSSSNSLAETEKRITQSQWITY 296
+ +LD M S G N R N L N Y A+ +D+ + R + +TY
Sbjct: 370 KANHMLDLMVSKGCGPN---IRTFNILINGYCKANLIDD-GLELFRKMSLRGVVADTVTY 425
Query: 297 DFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYLML-------GHVKEVGE 349
+ LI + LG + +++ Q+M++R I +Y +L G ++ E
Sbjct: 426 NTLIQGFCELGKLEVAKELF-------QEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478
Query: 350 VIDQWKNSTIDFDM 363
+ ++ + S ++ D+
Sbjct: 479 IFEKIEKSKMELDI 492
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/287 (18%), Positives = 114/287 (39%), Gaps = 19/287 (6%)
Query: 94 RSQRYKHALEISEWMITHEEHGLSDSD--YAMRIDLMTKVFGIDAAERYFEAL--PVAAK 149
+ + + A E+ + MI + G+S Y ID K +D A + +
Sbjct: 329 KEGKLREAEELHKEMI---QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP 385
Query: 150 TSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVV 209
T+ L++ Y A + + EL++++ + D +TYN ++ + +G++E +
Sbjct: 386 NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELF 445
Query: 210 EELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVT 269
+E+ R V PDI +Y + + ++ I +++ E L++ +
Sbjct: 446 QEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI-------EKSKMELDIGIYNII 498
Query: 270 ASHLDNSSS-----NSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQ 324
+ N+S + + + TY+ +I GS + D ++ +
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Query: 325 KMINRNYSCIISAYLMLGHVKEVGEVIDQWKNSTIDFDMLACKKIMD 371
Y+ +I A+L G + ++I++ K D K ++D
Sbjct: 559 SPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVD 605
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 86/179 (48%), Gaps = 18/179 (10%)
Query: 69 ILHKWVLEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDYAMRIDLM 128
++H +E N + +E+ + +E+R ++ + + + +HG + +A+ ++M
Sbjct: 368 LIHGLFME-NKIEAAEI--LIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMM 424
Query: 129 TKVFGIDAAERYFEALPVAAKTSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALT 188
T GI T TYT+L++ T +A+EL++++ + D +
Sbjct: 425 TD--GIQP-------------TQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVM 469
Query: 189 YNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEM 247
N +M + ++G +++ S+++E+ +++PD TYN + +E R ++ EM
Sbjct: 470 MNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEM 528
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 84/187 (44%), Gaps = 6/187 (3%)
Query: 78 NSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDYAMRIDLMTKVFGIDAA 137
NS+T S L D L R K A+E+ E MI+ E + + I+ + ++ A
Sbjct: 231 NSITYSTLMDC---LFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERA 287
Query: 138 ERYFEALPVAAKTSETY--TALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTL 195
++ + + Y +AL++ + ++A++ + +K + L D + Y +M
Sbjct: 288 KKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNC 347
Query: 196 YMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDE-MSHGADSN 254
+ G+ ++ ++ E+K D TYN+ + ++ +E ++LD+ S G N
Sbjct: 348 FCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLN 407
Query: 255 ESWTRYL 261
+ R +
Sbjct: 408 KGSYRII 414
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
TY L+ + +AE+L I L D TYN +++ Y G V++ ++ EE+
Sbjct: 566 TYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEM 625
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGAD 252
K+ + P + TY+L IS C I+ R+ EMS D
Sbjct: 626 KRSGIKPTLKTYHLLISLCTKE-GIELTERLFGEMSLKPD 664
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 108/251 (43%), Gaps = 10/251 (3%)
Query: 147 AAKTSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVP 206
+ + ETY L+ Y +K ++ + ++D+ + ++Y ++ ++ +
Sbjct: 455 VSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQ 514
Query: 207 SVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEM-SHGADSNESWTRYLNLAN 265
V +++ R VSP + YN+ I C + I++ R EM G + N Y L +
Sbjct: 515 IVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELN--LVTYNTLID 572
Query: 266 VYVTASHLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQK 325
L + + + L E ++ + TY+ LI Y G+ + ++ ++ + K
Sbjct: 573 GLSMTGKL-SEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIK 631
Query: 326 MINRNYSCIISAYLMLGHVKEVGEVIDQ-WKNSTIDFDMLACKKIMDAFRATGLADIANN 384
+ Y +IS KE E+ ++ + ++ D+L ++ + G + A N
Sbjct: 632 PTLKTYHLLISL-----CTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFN 686
Query: 385 LNMILIEKNIN 395
L +IEK+I
Sbjct: 687 LQKQMIEKSIG 697
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 114/294 (38%), Gaps = 54/294 (18%)
Query: 84 ELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDYAMRIDLMTKVFGIDAAERYFEA 143
+L D+ K L R KH I Y + ID + K ++ AE+ F+
Sbjct: 191 KLSDVGKGLELFNRMKHDRIYPSVFI-----------YNVLIDGLCKGKRMNDAEQLFDE 239
Query: 144 LPVAAKTSE---TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVG 200
+ +A + TY L+ Y A EK+ ++ +R+K ++ +T+N ++ G
Sbjct: 240 M-LARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAG 298
Query: 201 QVEKVPSVVEELKQRNVSPDIFTYNLWIS----------------------------SCA 232
VE +V++E+K PD FT+++ +C+
Sbjct: 299 MVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCS 358
Query: 233 ATLN-------IDEVRRILD-EMSHGADSNESWTRYLNLANVYVTASHLDNSSSNSLAET 284
LN I++ IL EM+ G NE Y + + Y L + +
Sbjct: 359 ILLNALCKEGKIEKAEEILGREMAKGLVPNEVI--YNTMIDGYCRKGDLVGARMK-IEAM 415
Query: 285 EKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAY 338
EK+ + + Y+ LI + LG + ++ N +++ Y+ +I Y
Sbjct: 416 EKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGY 469
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 101/232 (43%), Gaps = 16/232 (6%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
+Y A+L+S G K + E +Y+++ + S D LTYN ++ +G++++ + +E+
Sbjct: 221 SYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEM 280
Query: 213 KQRNVSPDIFTYNLWI-------SSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLAN 265
+ SPD +TYN+ + AA ++ ++ + G D S Y L +
Sbjct: 281 ARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEV------GIDP--SVLHYTTLID 332
Query: 266 VYVTASHLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQK 325
A +L+ + L E K + + Y +I Y G DK +++ + + Q
Sbjct: 333 GLSRAGNLE-ACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQL 391
Query: 326 MINRNYSCIISAYLMLGHVKEVGEVIDQWKNSTIDFDMLACKKIMDAFRATG 377
Y+ +I M G +E ++ + ++ + + + ++ R G
Sbjct: 392 PNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAG 443
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/293 (19%), Positives = 117/293 (39%), Gaps = 10/293 (3%)
Query: 94 RSQRYKHALEISEWMITHEEHGLSDSDYAMRIDLMTKVFGIDAAERYFEALPVAAKTSET 153
RS Y +L + E M+ + D + L+ F + + + + K +
Sbjct: 101 RSGNYIESLHLLETMVRKG----YNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQP 156
Query: 154 ----YTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVV 209
Y AL++ + + A + R++ + S D +TYN M+ S G+++ V+
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216
Query: 210 EELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVT 269
+L N P + TY + I + +DE +++DEM + +T Y +
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFT-YNTIIRGMCK 275
Query: 270 ASHLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINR 329
+D + + E + + I+Y+ L+ G ++ +++ + K
Sbjct: 276 EGMVDRAFE-MVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 330 NYSCIISAYLMLGHVKEVGEVIDQWKNSTIDFDMLACKKIMDAFRATGLADIA 382
YS +I+ G ++E ++ K + D + ++ AF G D+A
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 387
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 107/267 (40%), Gaps = 27/267 (10%)
Query: 150 TSETYTALLHSYAGAKMTEKAEEL-YQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSV 208
+S T A++ YA + +AE + Y + S D L YN M+ Y EK S+
Sbjct: 478 SSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSL 537
Query: 209 VEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYV 268
+ +K + PD TYN A +DE +RIL EM + Y + YV
Sbjct: 538 FKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLD-SGCKPGCKTYAAMIASYV 596
Query: 269 TASHLDNSSSNSLAET-EKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMI 327
L S + L E EK + + Y LI G +++ RM ++ +
Sbjct: 597 RLGLL--SDAVDLYEAMEKTGVKPNEVVYGSLI---NGFAESGMVEEAIQYFRMMEEHGV 651
Query: 328 NRNY---SCIISAYLMLGHVKEVGEVIDQWKNSTIDFDMLA----------------CKK 368
N+ + +I AY +G ++E V D+ K+S D+ A +
Sbjct: 652 QSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAES 711
Query: 369 IMDAFRATGLADIANNLNMILIEKNIN 395
I +A R G D+ + M+ + K +
Sbjct: 712 IFNALREKGTCDVISFATMMYLYKGMG 738
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 80/175 (45%), Gaps = 5/175 (2%)
Query: 76 EGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDYAMR--IDLMTKVFG 133
E VT+ + + + L +S +Y A + ++ + +G+ AM +D + K
Sbjct: 197 ESKLVTLDTMSKVMRRLAKSGKYNKA--VDAFLEMEKSYGVKTDTIAMNSLMDALVKENS 254
Query: 134 IDAAERYFEALPVAAKT-SETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEM 192
I+ A F L K + T+ L+H + A+ + A + +K + + D +TY
Sbjct: 255 IEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSF 314
Query: 193 MTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEM 247
+ Y G +V ++EE+++ +P++ TY + + S + + E + ++M
Sbjct: 315 VEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKM 369
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 71/165 (43%), Gaps = 2/165 (1%)
Query: 155 TALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQ 214
+++L Y +A +L++ +++N+S D + YN +G+VE+ + E+
Sbjct: 365 SSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTG 424
Query: 215 RNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASHLD 274
+ ++PD+ Y I C + ++ EM G Y LA T + L
Sbjct: 425 KGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMD-GTGKTPDIVIYNVLAGGLAT-NGLA 482
Query: 275 NSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSL 319
+ +L E R + ++T++ +I G DK + + SL
Sbjct: 483 QEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESL 527
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 98/215 (45%), Gaps = 8/215 (3%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
TY++L+ + AE + ++ + +T++ ++ Y G++ KV SV + +
Sbjct: 85 TYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMM 144
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEM-SHGADSNESWTRYLNLANVYVTAS 271
Q ++ P++FTY+ I +DE ++LD M S G N Y LAN + +S
Sbjct: 145 IQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPN--VVTYSTLANGFFKSS 202
Query: 272 HLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMIN--R 329
+D+ L + +R + ++ + LI Y G D ++ MT +I R
Sbjct: 203 RVDD-GIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFG--YMTSNGLIPNIR 259
Query: 330 NYSCIISAYLMLGHVKEVGEVIDQWKNSTIDFDML 364
+Y+ +++ G V++ + + + D D++
Sbjct: 260 SYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDII 294
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 109/247 (44%), Gaps = 7/247 (2%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
T A++ +Y A + A LY R + DA+T++ ++ +Y G + ++ EE+
Sbjct: 247 TMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEM 306
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRIL-DEMSHGADSNESWTRYLNLANVYVTAS 271
K V P++ YN I S + + I D +++G N W+ Y L Y A
Sbjct: 307 KALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPN--WSTYAALVRAYGRAR 364
Query: 272 HLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINR-N 330
+ D++ + EK ++ + I Y+ L+ + A D+ +I+ ++ + +
Sbjct: 365 YGDDALAIYREMKEKGLSLTV-ILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWT 423
Query: 331 YSCIISAYLMLGHVKEVGEVIDQWKNSTIDFDMLACKKIMDAF-RATGLADIANNLNMIL 389
+S +I+ Y G V E + Q + + + + ++ + +A + D+ + +L
Sbjct: 424 FSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVL 483
Query: 390 IEKNINP 396
E I P
Sbjct: 484 -ELGITP 489
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 88/204 (43%), Gaps = 39/204 (19%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQV---------- 202
TYTAL++++A + EKAEE+++++++ L D YN +M Y G
Sbjct: 301 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 360
Query: 203 -------------------------EKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNI 237
+V EE+K+ ++P + ++ L +S+ + ++
Sbjct: 361 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDV 420
Query: 238 DEVRRILDEMSHGADSNESWTRYLN-LANVYVTASHLDNSSSNSLAETEKRITQSQWITY 296
+ I+ EMS + E T LN + N+Y LAE E + TY
Sbjct: 421 TKCEAIVKEMSE--NGVEPDTFVLNSMLNLYGRLGQF-TKMEKILAEMENGPCTADISTY 477
Query: 297 DFLIILYAGLGSKDKLDQIWNSLR 320
+ LI +Y G +++++++ L+
Sbjct: 478 NILINIYGKAGFLERIEELFVELK 501
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 145 PVAAKTSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEK 204
P A S TY L++ Y A E+ EEL+ +K+ N D +T+ + Y K
Sbjct: 469 PCTADIS-TYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVK 527
Query: 205 VPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHG 250
V EE+ +PD T + +S+C++ +++V +L M G
Sbjct: 528 CLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKG 573
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 88/204 (43%), Gaps = 39/204 (19%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQV---------- 202
TYTAL++++A + EKAEE+++++++ L D YN +M Y G
Sbjct: 323 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 382
Query: 203 -------------------------EKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNI 237
+V EE+K+ ++P + ++ L +S+ + ++
Sbjct: 383 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDV 442
Query: 238 DEVRRILDEMSHGADSNESWTRYLN-LANVYVTASHLDNSSSNSLAETEKRITQSQWITY 296
+ I+ EMS + E T LN + N+Y LAE E + TY
Sbjct: 443 TKCEAIVKEMSE--NGVEPDTFVLNSMLNLYGRLGQF-TKMEKILAEMENGPCTADISTY 499
Query: 297 DFLIILYAGLGSKDKLDQIWNSLR 320
+ LI +Y G +++++++ L+
Sbjct: 500 NILINIYGKAGFLERIEELFVELK 523
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 145 PVAAKTSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEK 204
P A S TY L++ Y A E+ EEL+ +K+ N D +T+ + Y K
Sbjct: 491 PCTADIS-TYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVK 549
Query: 205 VPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHG 250
V EE+ +PD T + +S+C++ +++V +L M G
Sbjct: 550 CLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKG 595
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 3/142 (2%)
Query: 136 AAERYFEALPVAAKTS-ETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMT 194
A E + E+ K S E++ ALL A+ ++ K N+ FD+ +YN M++
Sbjct: 205 AIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFN-AKKGNIPFDSCSYNIMIS 263
Query: 195 LYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSN 254
+ +G+VE++ V++E+ + PD +Y+ I T I++ I D + H +
Sbjct: 264 GWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVP 323
Query: 255 ESWTRYLNLANVYVTASHLDNS 276
++ + N +++A D S
Sbjct: 324 DANVYNAMICN-FISARDFDES 344
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
Query: 125 IDLMTKVFGIDAAERYFEALPVAAKTSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSF 184
ID+ K + A F+ + AK + +L+ + A + + AE L R++ +
Sbjct: 267 IDMYIKTGYLPYARMVFDMMD--AKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKP 324
Query: 185 DALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRIL 244
DA+T+N + + Y ++G+ EK V+ ++K++ V+P++ ++ S C+ N ++
Sbjct: 325 DAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVF 384
Query: 245 DEM 247
+M
Sbjct: 385 IKM 387
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 5/118 (4%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
TY +L+ Y + EKA +L ++++ + D +TY ++ +GQ +K V++E+
Sbjct: 248 TYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEM 307
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEM-----SHGADSNESWTRYLNLAN 265
K+ PD+ YN I + + + +++DEM S A + + R L+LAN
Sbjct: 308 KEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLAN 365
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
YT+L+ + K EK E Q+++ + +TY M+ YMS+G+VE+ + +
Sbjct: 891 VYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNM 950
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEM 247
++R SPD TY+ +I+ ++ ++L EM
Sbjct: 951 EERGTSPDFKTYSKFINCLCQACKSEDALKLLSEM 985
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 134 IDAAERYFEALP-VAAKTSE-TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNE 191
+DAA F+ +P K +E T+ L+ Y A +T+K EL ++ + + + YN
Sbjct: 163 VDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNT 222
Query: 192 MMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEM 247
+++ + G+ + +VE++++ + PDI T+N IS+ + + RI +M
Sbjct: 223 IVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDM 278
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 52/96 (54%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
TY AL++ + M ++A +++ +K YN ++ Y +G+++ ++ EE+
Sbjct: 368 TYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMS 248
++ + PD+ TYN I+ NI+ +++ D+++
Sbjct: 428 EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT 463
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 88/197 (44%), Gaps = 2/197 (1%)
Query: 150 TSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVV 209
T+ T+ L+ YA A AEE+ ++ D +T+ ++ Y VGQV + +
Sbjct: 311 TNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLW 370
Query: 210 EELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVT 269
EE+ R + P+ FTY++ I++ + + R +L +++ D Y + + +
Sbjct: 371 EEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLA-SKDIIPQPFMYNPVIDGFCK 429
Query: 270 ASHLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINR 329
A + N ++ + E EK+ + IT+ LII + G + I++ +
Sbjct: 430 AGKV-NEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKI 488
Query: 330 NYSCIISAYLMLGHVKE 346
S ++S L G KE
Sbjct: 489 TVSSLLSCLLKAGMAKE 505
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 88/197 (44%), Gaps = 2/197 (1%)
Query: 150 TSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVV 209
T+ T+ L+ YA A AEE+ ++ D +T+ ++ Y VGQV + +
Sbjct: 311 TNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLW 370
Query: 210 EELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVT 269
EE+ R + P+ FTY++ I++ + + R +L +++ D Y + + +
Sbjct: 371 EEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLA-SKDIIPQPFMYNPVIDGFCK 429
Query: 270 ASHLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINR 329
A + N ++ + E EK+ + IT+ LII + G + I++ +
Sbjct: 430 AGKV-NEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKI 488
Query: 330 NYSCIISAYLMLGHVKE 346
S ++S L G KE
Sbjct: 489 TVSSLLSCLLKAGMAKE 505
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 103/245 (42%), Gaps = 4/245 (1%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
TY AL+ A L + + + + +T+ ++ ++ VG++ + + +
Sbjct: 225 TYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVM 284
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMS-HGADSNESWTRYLNLANVYVTAS 271
Q +V PD+FTY I+ +DE R++ M +G NE Y L + + +
Sbjct: 285 IQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE--VIYTTLIHGFCKSK 342
Query: 272 HLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRNY 331
+++ ++K + + ITY LI Y +G D +++N + + R Y
Sbjct: 343 RVEDGMKIFYEMSQKGVVANT-ITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTY 401
Query: 332 SCIISAYLMLGHVKEVGEVIDQWKNSTIDFDMLACKKIMDAFRATGLADIANNLNMILIE 391
+ ++ G V++ + + + +D +++ I+ G + A +L L
Sbjct: 402 NVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFS 461
Query: 392 KNINP 396
K + P
Sbjct: 462 KGMKP 466
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 116/253 (45%), Gaps = 20/253 (7%)
Query: 121 YAMRIDLMTKVFGIDAAERYFEALPVAAKTSE--TYTALLHSYAGAKMTEKAEELYQRIK 178
Y++ ID + K +D A F + + ++ TY L+ + A + +L + +
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 179 DSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNID 238
+S + +T++ ++ ++ G++ + +++E+ QR ++P+ TYN I ++
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 239 EVRRILDEM-SHGADSNESWTRYLNLANVYVTASHLDNSSSNSLAETEKRITQSQWITYD 297
E +++D M S G D + + L N Y A+ +D+ E R + +TY+
Sbjct: 386 EAIQMVDLMISKGCDPD--IMTFNILINGYCKANRIDDGLE-LFREMSLRGVIANTVTYN 442
Query: 298 FLIILYAGLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYLML-------GHVKEVGEV 350
L+ + G + +++ Q+M++R I +Y +L G +++ E+
Sbjct: 443 TLVQGFCQSGKLEVAKKLF-------QEMVSRRVRPDIVSYKILLDGLCDNGELEKALEI 495
Query: 351 IDQWKNSTIDFDM 363
+ + S ++ D+
Sbjct: 496 FGKIEKSKMELDI 508
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 106/245 (43%), Gaps = 4/245 (1%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
TYTAL++ + A L + ++ + +TY+ ++ ++ G+V + + EE+
Sbjct: 227 TYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 286
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEM-SHGADSNESWTRYLNLANVYVTAS 271
+ ++ PDI TY+ I+ IDE ++ D M S G ++ Y L N + A
Sbjct: 287 VRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD--VVSYNTLINGFCKAK 344
Query: 272 HLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRNY 331
+++ E +R S +TY+ LI + G DK + ++ + Y
Sbjct: 345 RVED-GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTY 403
Query: 332 SCIISAYLMLGHVKEVGEVIDQWKNSTIDFDMLACKKIMDAFRATGLADIANNLNMILIE 391
+ ++ G +++ + + + +D D++ ++ TG + A +L L
Sbjct: 404 NILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSL 463
Query: 392 KNINP 396
K + P
Sbjct: 464 KGLKP 468
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Query: 134 IDAAERYFEALPVAAKTSE--TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNE 191
ID A + F+ + ++ +Y L++ + AK E +L++ + L + +TYN
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 192 MMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEM 247
++ + G V+K ++ +SPDI+TYN+ + +++ I ++M
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 121 YAMRIDLMTKVFGIDAAERYFEALPVAAKTSET--YTALLHSYAGAKMTEKAEELYQRIK 178
Y I V ++ A ++E + A + + Y AL+ + A + +++K
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 179 DSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNID 238
+ S D L YN ++ L+ EKV ++ ++++ PD TYN IS + +
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 239 EVRRILDEMSH-GADSNESWTRYLNLANVYVTASHLDNS 276
V R++++M G D + T Y + + Y + LD +
Sbjct: 599 SVERMMEQMREDGLDP--TVTTYGAVIDAYCSVGELDEA 635
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 88/195 (45%), Gaps = 9/195 (4%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
TY L+H+ EKA Y+++ ++ S DA Y +++ V + VVE+L
Sbjct: 478 TYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKL 537
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASH 272
K+ S D+ YN+ I N ++V +L +M +S T Y L + + H
Sbjct: 538 KEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSIT-YNTLISFF--GKH 594
Query: 273 LDNSSSNSLAETEKRITQSQWI-TYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRN- 330
D S + E + + TY +I Y +G D+ +++ + + + +N N
Sbjct: 595 KDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSK--VNPNT 652
Query: 331 --YSCIISAYLMLGH 343
Y+ +I+A+ LG+
Sbjct: 653 VIYNILINAFSKLGN 667
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 5/140 (3%)
Query: 138 ERYFEALPVAAKTSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYM 197
E+ EA + ++ Y AL+ + A + +++K+ S D L YN ++ L+
Sbjct: 500 EKMLEA--GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFC 557
Query: 198 SVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSH-GADSNES 256
EKV ++ ++++ PD TYN IS + + V R++++M G D +
Sbjct: 558 DKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDP--T 615
Query: 257 WTRYLNLANVYVTASHLDNS 276
T Y + + Y + LD +
Sbjct: 616 VTTYGAVIDAYCSVGELDEA 635
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 88/195 (45%), Gaps = 9/195 (4%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
TY L+H+ EKA Y+++ ++ S DA Y +++ V + VVE+L
Sbjct: 478 TYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKL 537
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASH 272
K+ S D+ YN+ I N ++V +L +M +S T Y L + + H
Sbjct: 538 KEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSIT-YNTLISFF--GKH 594
Query: 273 LDNSSSNSLAETEKRITQSQWI-TYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRN- 330
D S + E + + TY +I Y +G D+ +++ + + + +N N
Sbjct: 595 KDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSK--VNPNT 652
Query: 331 --YSCIISAYLMLGH 343
Y+ +I+A+ LG+
Sbjct: 653 VIYNILINAFSKLGN 667
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 105/247 (42%), Gaps = 8/247 (3%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
T ++LL+ Y +K A L ++ + D T+ ++ + + ++V+++
Sbjct: 155 TLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQM 214
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASH 272
QR PD+ TY ++ +ID +L +M G + Y + + H
Sbjct: 215 VQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI-YNTIIDGLCKYKH 273
Query: 273 LDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRN-- 330
+D+ + N E + + + TY LI G ++ + + ++ IN N
Sbjct: 274 MDD-ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM---IERKINPNVV 329
Query: 331 -YSCIISAYLMLGHVKEVGEVIDQWKNSTIDFDMLACKKIMDAFRATGLADIANNLNMIL 389
+S +I A++ G + E ++ D+ +ID D+ +++ F D A ++ ++
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 389
Query: 390 IEKNINP 396
I K+ P
Sbjct: 390 ISKDCFP 396
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 97/237 (40%), Gaps = 45/237 (18%)
Query: 129 TKVFGIDAAERYFEALPVAAKTSE--------TYTALLHSYAGAKMTEKAEELYQRIKDS 180
T + G A+R E + + + S+ TYT L+H + A+ + A+ +++++
Sbjct: 403 TLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV 462
Query: 181 NLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEV 240
+ + LTYN ++ G++ K V E L++ + PDI+TYN+ I
Sbjct: 463 GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG---------- 512
Query: 241 RRILDEMSHGADSNESWTRYLNLANVYVTASHLDNSSSNSLAETEKRITQSQWITYDFLI 300
M + W + NL+ L S N +A Y+ +I
Sbjct: 513 ------MCKAGKVEDGWELFCNLS--------LKGVSPNVIA-------------YNTMI 545
Query: 301 ILYAGLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYLMLGHVKEVGEVIDQWKNS 357
+ GSK++ D + ++ + Y+ +I A L G + E+I + ++
Sbjct: 546 SGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSC 602
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 5/140 (3%)
Query: 138 ERYFEALPVAAKTSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYM 197
E+ EA + ++ Y AL+ + A + +++K+ S D L YN ++ L+
Sbjct: 500 EKMLEA--GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFC 557
Query: 198 SVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSH-GADSNES 256
EKV ++ ++++ PD TYN IS + + V R++++M G D +
Sbjct: 558 DKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDP--T 615
Query: 257 WTRYLNLANVYVTASHLDNS 276
T Y + + Y + LD +
Sbjct: 616 VTTYGAVIDAYCSVGELDEA 635
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 88/195 (45%), Gaps = 9/195 (4%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
TY L+H+ EKA Y+++ ++ S DA Y +++ V + VVE+L
Sbjct: 478 TYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKL 537
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASH 272
K+ S D+ YN+ I N ++V +L +M +S T Y L + + H
Sbjct: 538 KEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSIT-YNTLISFF--GKH 594
Query: 273 LDNSSSNSLAETEKRITQSQWI-TYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRN- 330
D S + E + + TY +I Y +G D+ +++ + + + +N N
Sbjct: 595 KDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSK--VNPNT 652
Query: 331 --YSCIISAYLMLGH 343
Y+ +I+A+ LG+
Sbjct: 653 VIYNILINAFSKLGN 667
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 2/149 (1%)
Query: 101 ALEISEWMITHEEHGLSDSDYAMRIDLMTKVFGIDAAERYFEALPVAAKTSE--TYTALL 158
A + E M+ + H + Y +RID + KV + A + + + TYT ++
Sbjct: 498 AFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVI 557
Query: 159 HSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVS 218
Y + A LY + L +TY ++ + G++E+ E+K+R V
Sbjct: 558 RGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVR 617
Query: 219 PDIFTYNLWISSCAATLNIDEVRRILDEM 247
P++ T+N + NIDE R L +M
Sbjct: 618 PNVMTHNALLYGMCKAGNIDEAYRYLCKM 646
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 82/176 (46%), Gaps = 8/176 (4%)
Query: 75 LEGNSVTVSELRD-IAKELRRSQRYKHALEISEWMITHEEHGLSDSDYAMRIDLMTKVFG 133
L+ N V+ S L D KE Q K +++ + E+ Y ID K+
Sbjct: 363 LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEY-----TYTSLIDANCKIGN 417
Query: 134 IDAAERYF-EALPVAAK-TSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNE 191
+ A R E L V + TYTAL+ A+ ++AEEL+ ++ + + + +YN
Sbjct: 418 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNA 477
Query: 192 MMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEM 247
++ ++ +++ ++ ELK R + PD+ Y +I + I+ + +++EM
Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM 533
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/285 (19%), Positives = 117/285 (41%), Gaps = 18/285 (6%)
Query: 121 YAMRIDLMTKVFGIDAAERYFEALPVAAKTSE--TYTALLHSYAGAKMTEKAEELYQRIK 178
Y+ ID + + IDAA F+ + S TY +L+ A L + +
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 290
Query: 179 DSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNID 238
+ + +T+N ++ +++ G++++ + +E+ R +SP+I TYN + +
Sbjct: 291 SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLS 350
Query: 239 EVRRILDEMSHGADSNESWTRYLNLANVYVTASHLDNSSSNSLAETEKRITQSQWITYDF 298
E +LD M S + T + +L Y +D+ KR + +TY
Sbjct: 351 EANNMLDLMVRNKCSPDIVT-FTSLIKGYCMVKRVDD-GMKVFRNISKRGLVANAVTYSI 408
Query: 299 LIILYAGLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYLML-------GHVKEVGEVI 351
L+ + G ++++ Q+M++ + Y +L G +++ E+
Sbjct: 409 LVQGFCQSGKIKLAEELF-------QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461
Query: 352 DQWKNSTIDFDMLACKKIMDAFRATGLADIANNLNMILIEKNINP 396
+ + S +D ++ I++ G + A NL L K + P
Sbjct: 462 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKP 506
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 154 YTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELK 213
+ +L+ SY A + +++ +L+Q +K +S LT+N ++++ + G+ + +E++
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 214 QR-NVSPDIFTYNLWISSCAATLNIDEVRRILDEM 247
+ V+PD +T+N I+ +DE RI +M
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDM 235
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 86/200 (43%), Gaps = 2/200 (1%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
++T L+ + +K +A L ++ ++ D YN +M + ++ + + V +++
Sbjct: 232 SFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKM 291
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASH 272
K+ V PD TYN I + ++E R L M ++ T Y +L N
Sbjct: 292 KEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTAT-YTSLMNGMCRKGE 350
Query: 273 LDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRNYS 332
+ S L E E R TY+ L+ DK +++ ++ + K+ + Y+
Sbjct: 351 SLGALS-LLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYA 409
Query: 333 CIISAYLMLGHVKEVGEVID 352
++ + + G V E EV D
Sbjct: 410 TLVRSLVKSGKVAEAYEVFD 429
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 102/245 (41%), Gaps = 20/245 (8%)
Query: 138 ERYFEALPVAAKTSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYM 197
E++ + L V K TY L+ A M E A++++ ++K + D TYN ++ Y
Sbjct: 773 EKFTKDLGVQPKLP-TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYG 831
Query: 198 SVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESW 257
G+++++ + +E+ + T+N+ IS N+D+ + ++ D + +
Sbjct: 832 KSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTA 891
Query: 258 TRYLNLANVYVTASHLDNSSSNSLAETEKRI-------TQSQWITYDFLIILYAGLGSKD 310
Y L + S S L E ++ + Y+ LI + G D
Sbjct: 892 CTYGPLIDGL--------SKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEAD 943
Query: 311 KLDQIWNSLRMTKQKMIN--RNYSCIISAYLMLGHVKEVGEVIDQWKNSTIDFDMLACKK 368
++ RM K+ + + YS ++ M+G V E + K S ++ D++
Sbjct: 944 AACALFK--RMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNL 1001
Query: 369 IMDAF 373
I++
Sbjct: 1002 IINGL 1006
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%)
Query: 156 ALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQR 215
A L+S A A +A++++ +KD L D++TYN MM Y VG++++ ++ E+ +
Sbjct: 473 ASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMEN 532
Query: 216 NVSPDIFTYNLWISSCAATLNIDEVRRILDEM 247
PD+ N I++ +DE ++ M
Sbjct: 533 GCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 68/148 (45%), Gaps = 1/148 (0%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
T+ L+H Y+ E A E+ + D+ + D TYN ++ + E V + +
Sbjct: 463 TFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTM 522
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASH 272
++ +P++FT+N+ + S +DE +L+EM + + + ++ T + L + +
Sbjct: 523 VEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVT-FGTLIDGFCKNGD 581
Query: 273 LDNSSSNSLAETEKRITQSQWITYDFLI 300
LD + + E S TY+ +I
Sbjct: 582 LDGAYTLFRKMEEAYKVSSSTPTYNIII 609
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 59/114 (51%), Gaps = 9/114 (7%)
Query: 129 TKVFGIDAAERYFEALPVAAKTSE--------TYTALLHSYAGAKMTEKAEELYQRIKDS 180
T + G A+R E + + + S+ TYT L+H + A+ + A+ +++++
Sbjct: 401 TLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSD 460
Query: 181 NLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISS-CAA 233
+ D +TY+ ++ + G+VE V E L++ + PDI+TYN+ I C A
Sbjct: 461 GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKA 514
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 2/139 (1%)
Query: 111 HEEHGLSD-SDYAMRIDLMTKVFGIDAAERYFEALPVAAKT-SETYTALLHSYAGAKMTE 168
HE D + + +D++ K ++ A F AL + TY +L+ + K T
Sbjct: 153 HEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTP 212
Query: 169 KAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWI 228
KA E+ + + + ++ + TYN M+ + GQ+ E+K+R+ D+ TY +
Sbjct: 213 KALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVV 272
Query: 229 SSCAATLNIDEVRRILDEM 247
I R + DEM
Sbjct: 273 HGFGVAGEIKRARNVFDEM 291
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 185 DALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRIL 244
D +TYN ++ Y +++ +V +++ + PD+ TYN IS A L ++ V ++
Sbjct: 47 DVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLF 106
Query: 245 DEMSHGADSNESWTRYLNLANVY 267
DEM H S + W+ Y L + Y
Sbjct: 107 DEMLHSGLSPDMWS-YNTLMSCY 128
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 100/233 (42%), Gaps = 8/233 (3%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
TY L+ Y ++A + +R++++ + D TYN +++ + +V + +E+
Sbjct: 50 TYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEM 109
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASH 272
+SPD+++YN +S E +IL E H A Y L + + H
Sbjct: 110 LHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGH 169
Query: 273 LDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRN-- 330
DN+ L + K + + +TY+ LI GL ++ + +R K+ N
Sbjct: 170 TDNAI--ELFKHLKSRVKPELMTYNILI---NGLCKSRRVGSVDWMMRELKKSGYTPNAV 224
Query: 331 -YSCIISAYLMLGHVKEVGEVIDQWKNSTIDFDMLACKKIMDAFRATGLADIA 382
Y+ ++ Y +++ ++ + K FD A ++ A TG A+ A
Sbjct: 225 TYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEA 277
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/301 (19%), Positives = 125/301 (41%), Gaps = 39/301 (12%)
Query: 92 LRRSQRYKHALEISEWMITHEEHGLSDSD---YAMRIDLMTKVFGIDAAERYFEALPVAA 148
L R++RY A E+ M+ D Y + I ++K I+ A + ++P
Sbjct: 313 LFRARRYTQAFELYANMLKKN----IKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKG 368
Query: 149 KTSETYT--ALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVP 206
+ +TY A++ + G + E+ L + ++ DA T+ ++ G V +
Sbjct: 369 ISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAE 428
Query: 207 SVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANV 266
+ E+++ SP + T+N I + + E R +L +M G A++
Sbjct: 429 EIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRP-----------ASL 477
Query: 267 YVTASHLDNSSSNSLAETEKRI-------------TQSQWITYDFLIILYAGLGSKDKLD 313
++ SH N S +++ E+ + + ++Y+ LI + G D
Sbjct: 478 FLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGAL 537
Query: 314 QIWNSLRMTKQKMINRNYSCIISAYLMLGHVKEVGEVI---DQWKNSTIDFDML---ACK 367
++ N L++ + Y+ +I+ +G +E ++ D +++S + L +C+
Sbjct: 538 KLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWSCR 597
Query: 368 K 368
K
Sbjct: 598 K 598
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 79/190 (41%), Gaps = 4/190 (2%)
Query: 150 TSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVV 209
T + Y LL S A + E+ + LY + + +S D T+N ++ Y +G V + V
Sbjct: 119 TPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYV 178
Query: 210 EELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSH-GADSNESWTRYLNLANVYV 268
L Q PD FTY +I+ +D ++ EM+ G NE Y L
Sbjct: 179 TWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNE--VSYTQLIYGLF 236
Query: 269 TASHLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMIN 328
A +D + S L + + TY LI G G K + ++ + + K +
Sbjct: 237 EAKKIDEALS-LLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDD 295
Query: 329 RNYSCIISAY 338
Y+ +I ++
Sbjct: 296 CMYTVLIQSF 305
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 70/161 (43%), Gaps = 4/161 (2%)
Query: 148 AKTSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPS 207
+ +S TY AL+ AE L ++ ++ + +N ++ Y G V++
Sbjct: 361 SPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASM 420
Query: 208 VVEELKQRNVSPDIFTYNLWISSCAATLN-IDEVRRILDEMSHGADSNESWTRYLNLANV 266
+ + ++Q+ D+FT N I+SC L DE ++ L M G S Y NL +V
Sbjct: 421 IYDVMEQKGFQADVFTCN-TIASCFNRLKRYDEAKQWLFRMMEGG-VKLSTVSYTNLIDV 478
Query: 267 YVTASHLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLG 307
Y +++ + E + Q ITY+ +I Y G
Sbjct: 479 YCKEGNVE-EAKRLFVEMSSKGVQPNAITYNVMIYAYCKQG 518
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
+YT L+ Y E+A+ L+ + + +A+TYN M+ Y G++++ + +
Sbjct: 471 SYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANM 530
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMS-HGADSN 254
+ + PD +TY I N+DE R+ EM G D N
Sbjct: 531 EANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQN 573
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 60/126 (47%), Gaps = 1/126 (0%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
T+ +++ Y E+A E+++++ D S D L++N +M + + + E+
Sbjct: 352 TFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEM 411
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASH 272
+++NV PD +TY L + +C IDE M ++ + Y L + + A
Sbjct: 412 EEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVE-SNLRPNLAVYNRLQDQLIKAGK 470
Query: 273 LDNSSS 278
LD++ S
Sbjct: 471 LDDAKS 476
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 130/318 (40%), Gaps = 18/318 (5%)
Query: 88 IAKELRRSQRYKHA---LEISEWMITHEEHGLSDSDYAMRIDLMTKVFGIDAAERYFEAL 144
+ L R Q+ + A L SEW ++ G S + + K+ +D A+ +F +
Sbjct: 193 VVDGLCRQQKLEDAVLFLRTSEW----KDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 145 PVAAKTSETYT--ALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQV 202
Y+ L++ +A EL + + D++TYN + + +G +
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 203 EKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEM-SHGADSNESWTRYL 261
V+ ++ + +SPD+ TY + + NID +L +M S G + N +
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 262 NLANVYVTASHLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQ-IWNSLR 320
L+ + T +D + S + + + Y +I GL K D +W
Sbjct: 369 MLSGLCKTG-RIDEALS-LFNQMKADGLSPDLVAYSIVI---HGLCKLGKFDMALWLYDE 423
Query: 321 MTKQKMI--NRNYSCIISAYLMLGHVKEVGEVIDQWKNSTIDFDMLACKKIMDAFRATGL 378
M ++++ +R + ++ G + E ++D +S D++ ++D + +G
Sbjct: 424 MCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGC 483
Query: 379 ADIANNLNMILIEKNINP 396
+ A L ++IE I P
Sbjct: 484 IEEALELFKVVIETGITP 501
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 130/318 (40%), Gaps = 18/318 (5%)
Query: 88 IAKELRRSQRYKHA---LEISEWMITHEEHGLSDSDYAMRIDLMTKVFGIDAAERYFEAL 144
+ L R Q+ + A L SEW ++ G S + + K+ +D A+ +F +
Sbjct: 193 VVDGLCRQQKLEDAVLFLRTSEW----KDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 145 PVAAKTSETYT--ALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQV 202
Y+ L++ +A EL + + D++TYN + + +G +
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 203 EKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEM-SHGADSNESWTRYL 261
V+ ++ + +SPD+ TY + + NID +L +M S G + N +
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 262 NLANVYVTASHLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQ-IWNSLR 320
L+ + T +D + S + + + Y +I GL K D +W
Sbjct: 369 MLSGLCKTG-RIDEALS-LFNQMKADGLSPDLVAYSIVI---HGLCKLGKFDMALWLYDE 423
Query: 321 MTKQKMI--NRNYSCIISAYLMLGHVKEVGEVIDQWKNSTIDFDMLACKKIMDAFRATGL 378
M ++++ +R + ++ G + E ++D +S D++ ++D + +G
Sbjct: 424 MCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGC 483
Query: 379 ADIANNLNMILIEKNINP 396
+ A L ++IE I P
Sbjct: 484 IEEALELFKVVIETGITP 501
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/243 (19%), Positives = 105/243 (43%), Gaps = 9/243 (3%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
T+ L++ A + A E+ + D TYN +++ +G+V++ V++++
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASH 272
R+ SP+ TYN IS+ ++E + ++ + T + + +T +H
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH 416
Query: 273 LDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRN-- 330
+ E + + TY+ LI L SK KLD+ N L+ + R+
Sbjct: 417 --RVAMELFEEMRSKGCEPDEFTYNMLI---DSLCSKGKLDEALNMLKQMELSGCARSVI 471
Query: 331 -YSCIISAYLMLGHVKEVGEVIDQWKNSTIDFDMLACKKIMDAF-RATGLADIANNLNMI 388
Y+ +I + +E E+ D+ + + + + ++D ++ + D A ++ +
Sbjct: 472 TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Query: 389 LIE 391
++E
Sbjct: 532 IME 534
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%)
Query: 154 YTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELK 213
Y ++ +K + A +L R++ + D +TYN +++ S G+ +V +
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT 248
Query: 214 QRNVSPDIFTYNLWISSCAATLNIDEVRRILDEM 247
+R + PD+FT+N I +C + E +EM
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRVSEAEEFYEEM 282
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
TYT L+ A ELY ++ L D + Y ++ GQ KV + EE+
Sbjct: 726 TYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEM 785
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEM 247
K+ NV+P++ YN I+ N+DE R+ DEM
Sbjct: 786 KKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEM 820
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 121 YAMRIDLMTKVFGIDAAERYFEALPVAA--KTSETYTALLHSYAGAKMTEKAEELYQRIK 178
Y +RID K A R FE + T + T L+H A+ KA +L+ I
Sbjct: 248 YGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEIS 307
Query: 179 DSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYN 225
L+ D YN +M+ M G V V++E++++ + PD T++
Sbjct: 308 KRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFH 354
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 65/131 (49%), Gaps = 7/131 (5%)
Query: 125 IDLMTKVFGIDA----AERYFEALPVAAKTS-ETYTALLHSYAGAKMTEKAEELYQRIKD 179
++++ + FGI + FE + K S TY++ + + GAK KA E+YQ I D
Sbjct: 101 LNVILRDFGISGRWQDLIQLFEWMQQHGKISVSTYSSCI-KFVGAKNVSKALEIYQSIPD 159
Query: 180 SNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLN-ID 238
+ + N +++ + G+++ + +++K+ + PD+ TYN ++ C N
Sbjct: 160 ESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYP 219
Query: 239 EVRRILDEMSH 249
+ ++ E+ H
Sbjct: 220 KAIELIGELPH 230
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
TY L+HSY A ++A ++ +++++ D +TY ++ ++ G ++ + + +
Sbjct: 396 TYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRM 455
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEM-SHGADSN 254
++ +SPD FTY++ I+ ++ R+ EM G N
Sbjct: 456 QEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPN 498
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 3/122 (2%)
Query: 137 AERYFEALPVAAKTSETYT--ALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMT 194
+RY + + V S Y+ A++ A+ E A ++D +S + +T+N ++
Sbjct: 409 GDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLS 468
Query: 195 LYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSH-GADS 253
Y G V+KV V+E+L PD+ T++L I+ I + EM G +
Sbjct: 469 GYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEP 528
Query: 254 NE 255
NE
Sbjct: 529 NE 530
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 3/134 (2%)
Query: 95 SQRYKHALEISEWMITHEEHGLSDSDYAMRIDLMTKVFGIDAAERYFEALPVAA--KTSE 152
+++ + ALE+ E +I + L Y + I M K +D A F +LP+ +
Sbjct: 515 NEKLEEALELFE-VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 573
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
TY ++ + G A L+ ++KD+ D TYN ++ + G+++K ++ E+
Sbjct: 574 TYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Query: 213 KQRNVSPDIFTYNL 226
+ S D FT +
Sbjct: 634 RSNGFSGDAFTIKM 647
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 3/134 (2%)
Query: 95 SQRYKHALEISEWMITHEEHGLSDSDYAMRIDLMTKVFGIDAAERYFEALPVAA--KTSE 152
+++ + ALE+ E +I + L Y + I M K +D A F +LP+ +
Sbjct: 515 NEKLEEALELFE-VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 573
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
TY ++ + G A L+ ++KD+ D TYN ++ + G+++K ++ E+
Sbjct: 574 TYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Query: 213 KQRNVSPDIFTYNL 226
+ S D FT +
Sbjct: 634 RSNGFSGDAFTIKM 647
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/184 (18%), Positives = 81/184 (44%), Gaps = 3/184 (1%)
Query: 68 NILHKWVLEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDYAMRIDL 127
N+ H N + EL D+ K LR+ AL + + + + + I
Sbjct: 27 NVNHLLTESPNHAEIKEL-DVVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRK 85
Query: 128 MTKVFGIDAAERYFEALPVAA--KTSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFD 185
+ +D+ + + + + + + + +++ Y + E+A E++ RIK+
Sbjct: 86 LAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPS 145
Query: 186 ALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILD 245
YN ++ + +++ + V ++K+ P++FTYN+ + + +D +++L
Sbjct: 146 VKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLV 205
Query: 246 EMSH 249
EMS+
Sbjct: 206 EMSN 209
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 80/177 (45%), Gaps = 10/177 (5%)
Query: 77 GNSVTVSELRDIAKELRRSQRYK--HALEISEWMITHEEHGLSDSDYA--MRIDLMTKVF 132
G +V L + L ++QR+ HA+ + + E G++ + + + + + K
Sbjct: 150 GVKRSVRSLNTLLNVLIQNQRFDLVHAM----FKNSKESFGITPNIFTCNLLVKALCKKN 205
Query: 133 GIDAAERYFEALPVAAKTSE--TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYN 190
I++A + + +P TYT +L Y E A+ + + + D DA TY
Sbjct: 206 DIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYT 265
Query: 191 EMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEM 247
+M Y +G+ + +V++++++ + P+ TY + I + E R + DEM
Sbjct: 266 VLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEM 322
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
TYT L+H + A+ + A+ +++++ + + +TYN ++ G++EK V E L
Sbjct: 437 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 496
Query: 213 KQRNVSPDIFTYNLWISS-CAA 233
++ + P I+TYN+ I C A
Sbjct: 497 QRSKMEPTIYTYNIMIEGMCKA 518
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
TYT L+H + A + A+ +++++ + + +TYN ++ G++EK V E L
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476
Query: 213 KQRNVSPDIFTYNL 226
++ + PDI+TYN+
Sbjct: 477 QKSKMEPDIYTYNI 490
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 102/245 (41%), Gaps = 18/245 (7%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQ--VEKVPSVVE 210
TY LL + +G + ++ I+ LS D N ++ Y G V + E
Sbjct: 119 TYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFE 178
Query: 211 ELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTA 270
++ +R D ++N + + + RR+ DEM SW L+ Y
Sbjct: 179 KMSER----DTVSWNSMLGGLVKAGELRDARRLFDEMPQ--RDLISWNTMLD---GYARC 229
Query: 271 SHLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRN 330
+ + E +++ + +++ +++ Y+ G + +++ + + + ++
Sbjct: 230 REMSKA-----FELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVT-- 282
Query: 331 YSCIISAYLMLGHVKEVGEVIDQWKNSTIDFDMLACKKIMDAFRATGLADIANNLNMILI 390
++ II+ Y G +KE ++DQ S + FD A I+ A +GL + ++ IL
Sbjct: 283 WTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILK 342
Query: 391 EKNIN 395
N+
Sbjct: 343 RSNLG 347
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 98/233 (42%), Gaps = 9/233 (3%)
Query: 150 TSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVV 209
+ + + L+ S+ + E+A + ++ + + + YN +M Y +E+V +
Sbjct: 343 SQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLF 402
Query: 210 EELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSH-GADSNESWTRYLNLANVYV 268
E++ + + P TYN+ + + A + D V +L EM G + N Y L + Y
Sbjct: 403 TEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPN--VKSYTCLISAYG 460
Query: 269 TASHLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMIN 328
+ + ++++ +K + +Y LI Y+ G +K + + K
Sbjct: 461 RTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSV 520
Query: 329 RNYSCIISAYLMLGHVKEVGEVIDQWK---NSTIDFDMLACKKIMDAFRATGL 378
Y+ ++ A+ G + G++++ WK I + ++D F GL
Sbjct: 521 ETYTSVLDAFRRSG---DTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGL 570
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 91/224 (40%), Gaps = 1/224 (0%)
Query: 154 YTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELK 213
Y L+ +Y + E+ E L+ ++D L A TYN +M Y Q + V +++ E++
Sbjct: 382 YNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREME 441
Query: 214 QRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASHL 273
+ P++ +Y IS+ T + ++ S Y L + Y + S
Sbjct: 442 DLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAY-SVSGW 500
Query: 274 DNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRNYSC 333
+ S E K + TY ++ + G KL +IW + K K Y+
Sbjct: 501 HEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNT 560
Query: 334 IISAYLMLGHVKEVGEVIDQWKNSTIDFDMLACKKIMDAFRATG 377
++ + G E +V+ ++ + ++ +M+A+ G
Sbjct: 561 LLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGG 604
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
T+ +L+H Y KA Y + ++ +S + TYN ++ G +++V + E+
Sbjct: 715 TFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEM 774
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEM 247
K R + PD FTYN IS A N+ I EM
Sbjct: 775 KSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEM 809
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 78 NSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDS--DYAMRIDLMTKVFGID 135
N VT + L D L ++ Y+HAL + M+ G+ Y + +D + K +
Sbjct: 293 NHVTYTTLVD---SLFKANIYRHALALYSQMVVR---GIPVDLVVYTVLMDGLFKAGDLR 346
Query: 136 AAERYFEALPVAAKTSE--TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMM 193
AE+ F+ L + TYTAL+ A AE + ++ + ++ + +TY+ M+
Sbjct: 347 EAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMI 406
Query: 194 TLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWI 228
Y+ G +E+ S++ +++ +NV P+ FTY I
Sbjct: 407 NGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVI 441
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 91/205 (44%), Gaps = 11/205 (5%)
Query: 149 KTSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSV 208
++S TALL +Y E+A +++ I D D + ++ M+ Y G+ E +
Sbjct: 426 RSSTVGTALLDAYVKLGKVEEAAKVFSGIDDK----DIVAWSAMLAGYAQTGETEAAIKM 481
Query: 209 VEELKQRNVSPDIFTYNLWISSCAAT-LNIDEVRRILDEMSHGADSNESWTRYLNLANVY 267
EL + + P+ FT++ ++ CAAT ++ + ++ HG L +++
Sbjct: 482 FGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQF-----HGFAIKSRLDSSLCVSSAL 536
Query: 268 VTASHLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMI 327
+T + + S E KR + ++++ +I YA G K ++ ++ K KM
Sbjct: 537 LTM-YAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMD 595
Query: 328 NRNYSCIISAYLMLGHVKEVGEVID 352
+ + +A G V+E + D
Sbjct: 596 GVTFIGVFAACTHAGLVEEGEKYFD 620
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
TY L++ + +E A + + + L D ++YN ++ ++ + + E+ + E++
Sbjct: 295 TYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDM 354
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEM 247
+R SPD +Y + L +E ILDEM
Sbjct: 355 PRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEM 389
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%)
Query: 153 TYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEEL 212
TYT L+H A A KA L + + + +TYN ++ +G V++ ++ +L
Sbjct: 757 TYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKL 816
Query: 213 KQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEM 247
Q+ ++P+ TYN I + N+ E R+ ++M
Sbjct: 817 PQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKM 851
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 96/218 (44%), Gaps = 8/218 (3%)
Query: 66 ATNILHKW--VLEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDYAM 123
+ +L +W +LE N V L +LR + + L+++E ++ + S SDY+
Sbjct: 334 PSGLLAEWAELLEPNRVDWIAL---INQLREGNTHAY-LKVAEGVLDEKSFNASISDYSK 389
Query: 124 RIDLMTKVFGIDAAERYFEALPVAAKTSE--TYTALLHSYAGAKMTEKAEELYQRIKDSN 181
I + K I+ ER + + + T TAL+H Y+ + E+A E ++ +K
Sbjct: 390 LIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYG 449
Query: 182 LSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVR 241
L D Y M+ Y++ G+ + +++E++ + + Y + + A + +
Sbjct: 450 LRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAA 509
Query: 242 RILDEMSHGADSNESWTRYLNLANVYVTASHLDNSSSN 279
I M + +D S+ Y Y A +D + SN
Sbjct: 510 GISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSN 547