Miyakogusa Predicted Gene
- Lj6g3v2193490.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v2193490.1 tr|G7IS57|G7IS57_MEDTR Sentrin-specific protease
OS=Medicago truncatula GN=MTR_2g009580 PE=4
SV=1,72.4,0,ULP_PROTEASE,Peptidase C48, SUMO/Sentrin/Ubl1;
Peptidase_C48,Peptidase C48, SUMO/Sentrin/Ubl1; SUBFA,CUFF.60871.1
(470 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G09730.2 | Symbols: | Cysteine proteinases superfamily prote... 397 e-111
AT1G09730.1 | Symbols: | Cysteine proteinases superfamily prote... 397 e-111
AT4G33620.1 | Symbols: | Cysteine proteinases superfamily prote... 333 2e-91
AT1G10570.1 | Symbols: OTS2, ULP1C | Cysteine proteinases superf... 107 2e-23
AT1G10570.2 | Symbols: OTS2, ULP1C | Cysteine proteinases superf... 107 2e-23
AT1G60220.1 | Symbols: OTS1, ULP1D | UB-like protease 1D | chr1:... 106 3e-23
AT4G15880.1 | Symbols: ESD4, ATESD4 | Cysteine proteinases super... 71 2e-12
AT3G48480.1 | Symbols: | Cysteine proteinases superfamily prote... 69 7e-12
AT3G06910.1 | Symbols: ULP1A, ELS1, AtULP1a | UB-like protease 1... 62 1e-09
AT4G00690.1 | Symbols: ULP1B | UB-like protease 1B | chr4:281313... 61 2e-09
>AT1G09730.2 | Symbols: | Cysteine proteinases superfamily protein
| chr1:3148017-3154236 REVERSE LENGTH=931
Length = 931
Score = 397 bits (1021), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/399 (49%), Positives = 266/399 (66%), Gaps = 16/399 (4%)
Query: 2 LKFTVYDSHWSKAEIAIKLLDVRYSDIWNTVFDIDTDNKGSISALGKDSFFSHRPYFPIF 61
LK V + +W + I L V+Y +WNT + D + G + + YFP F
Sbjct: 325 LKIAVKEHNWPNKQQKINSLHVKYPAVWNTDLEDDVEVSGY-------NLNQQKRYFPSF 377
Query: 62 DETFDEVIYPKGEPDAVSISKRDIGLLQPETFINDTIIDFYIKYLKNKLPTDEQEKXXXX 121
DE F++V+YPKG+PDAVSI KRD+ LLQPETF+NDTIIDFYI YLKN++ T+E+ +
Sbjct: 378 DEPFEDVVYPKGDPDAVSICKRDVELLQPETFVNDTIIDFYINYLKNQIQTEEKHRFHFF 437
Query: 122 XXXXXRKLADLDKNPSSACNGREAFQRVRKWTRKVNLFEKDYILIPINYSLHWSLVVICH 181
RKLADLDK+PSS +G+ AF RVRKWTRKV++F KDYI +P+NY+LHWSL+VICH
Sbjct: 438 NSFFFRKLADLDKDPSSIADGKAAFLRVRKWTRKVDMFGKDYIFVPVNYNLHWSLIVICH 497
Query: 182 PGEVTRVGGEEIKESSKVPCILHMDSLKGSHKGLKDVFQSYLCEEWKERHANVEDDLASE 241
PGEV ++ +S KVPCILHMDS+KGSH GLK++ Q+YLCEEWKERH DD++S
Sbjct: 498 PGEVANRTDLDLDDSKKVPCILHMDSIKGSHAGLKNLVQTYLCEEWKERHKETSDDISSR 557
Query: 242 FLHLRFISLELPQQENLYDCGLFLLHYVECFLKEAPVNFNPFKITKFSNFLKNNWFPPAE 301
F++LRF+SLELPQQEN +DCGLFLLHY+E FL EAP+NF+PFKI SNFL NWFPPAE
Sbjct: 558 FMNLRFVSLELPQQENSFDCGLFLLHYLELFLAEAPLNFSPFKIYNASNFLYLNWFPPAE 617
Query: 302 ASLKRSHIHNLIYDISGNNFLQAPPADCHDKGLSSEVSGVIKHKVDVDSPGVCCYPAT-W 360
ASLKR+ I LI+++ N + +++ S E + + ++ C P
Sbjct: 618 ASLKRTLIQKLIFELLENRSREV----SNEQNQSCESPVAVNDDMGIEVLSERCSPLIDC 673
Query: 361 HGNPSNSRSD----IQFPTASPVRVASCLRETGIVSKDL 395
+G+ + ++ D + S +R ++G+V +DL
Sbjct: 674 NGDMTQTQDDQGIEMTLLERSSMRHIQAANDSGMVLRDL 712
>AT1G09730.1 | Symbols: | Cysteine proteinases superfamily protein
| chr1:3148017-3154236 REVERSE LENGTH=963
Length = 963
Score = 397 bits (1021), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/399 (49%), Positives = 266/399 (66%), Gaps = 16/399 (4%)
Query: 2 LKFTVYDSHWSKAEIAIKLLDVRYSDIWNTVFDIDTDNKGSISALGKDSFFSHRPYFPIF 61
LK V + +W + I L V+Y +WNT + D + G + + YFP F
Sbjct: 357 LKIAVKEHNWPNKQQKINSLHVKYPAVWNTDLEDDVEVSGY-------NLNQQKRYFPSF 409
Query: 62 DETFDEVIYPKGEPDAVSISKRDIGLLQPETFINDTIIDFYIKYLKNKLPTDEQEKXXXX 121
DE F++V+YPKG+PDAVSI KRD+ LLQPETF+NDTIIDFYI YLKN++ T+E+ +
Sbjct: 410 DEPFEDVVYPKGDPDAVSICKRDVELLQPETFVNDTIIDFYINYLKNQIQTEEKHRFHFF 469
Query: 122 XXXXXRKLADLDKNPSSACNGREAFQRVRKWTRKVNLFEKDYILIPINYSLHWSLVVICH 181
RKLADLDK+PSS +G+ AF RVRKWTRKV++F KDYI +P+NY+LHWSL+VICH
Sbjct: 470 NSFFFRKLADLDKDPSSIADGKAAFLRVRKWTRKVDMFGKDYIFVPVNYNLHWSLIVICH 529
Query: 182 PGEVTRVGGEEIKESSKVPCILHMDSLKGSHKGLKDVFQSYLCEEWKERHANVEDDLASE 241
PGEV ++ +S KVPCILHMDS+KGSH GLK++ Q+YLCEEWKERH DD++S
Sbjct: 530 PGEVANRTDLDLDDSKKVPCILHMDSIKGSHAGLKNLVQTYLCEEWKERHKETSDDISSR 589
Query: 242 FLHLRFISLELPQQENLYDCGLFLLHYVECFLKEAPVNFNPFKITKFSNFLKNNWFPPAE 301
F++LRF+SLELPQQEN +DCGLFLLHY+E FL EAP+NF+PFKI SNFL NWFPPAE
Sbjct: 590 FMNLRFVSLELPQQENSFDCGLFLLHYLELFLAEAPLNFSPFKIYNASNFLYLNWFPPAE 649
Query: 302 ASLKRSHIHNLIYDISGNNFLQAPPADCHDKGLSSEVSGVIKHKVDVDSPGVCCYPAT-W 360
ASLKR+ I LI+++ N + +++ S E + + ++ C P
Sbjct: 650 ASLKRTLIQKLIFELLENRSREV----SNEQNQSCESPVAVNDDMGIEVLSERCSPLIDC 705
Query: 361 HGNPSNSRSD----IQFPTASPVRVASCLRETGIVSKDL 395
+G+ + ++ D + S +R ++G+V +DL
Sbjct: 706 NGDMTQTQDDQGIEMTLLERSSMRHIQAANDSGMVLRDL 744
>AT4G33620.1 | Symbols: | Cysteine proteinases superfamily protein
| chr4:16147692-16152853 FORWARD LENGTH=783
Length = 783
Score = 333 bits (853), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 182/386 (47%), Positives = 246/386 (63%), Gaps = 17/386 (4%)
Query: 1 MLKFTVYDSHWSKAEIAIKLLDVRYSDIWNTVFDIDTDNKGSISALGKDSFFSHRPYFPI 60
+LKF+VYD WSK I+ LD RY +IW FD T+++ I+ G D S
Sbjct: 236 LLKFSVYDPKWSKEVETIRSLDSRYKNIW---FDTITESE-EIAFSGHDLGTS----LTN 287
Query: 61 FDETFDEVIYPKGEPDAVSISKRDIGLLQPETFINDTIIDFYIKYLKNKLPTDEQEKXXX 120
++F++++YP+GEPDAV + K+DI LL+P FINDTIIDFYIKYLKN++ E+ +
Sbjct: 288 LADSFEDLVYPQGEPDAVVVRKQDIELLKPRRFINDTIIDFYIKYLKNRISPKERGRFHF 347
Query: 121 XXXXXXRKLADLDKNPSSACNGREAFQRVRKWTRKVNLFEKDYILIPINYSLHWSLVVIC 180
RKLA+LDK S C GREA+QRV+KWT+ V+LFEKDYI IPIN S HWSLV+IC
Sbjct: 348 FNCFFFRKLANLDKGTPSTCGGREAYQRVQKWTKNVDLFEKDYIFIPINCSFHWSLVIIC 407
Query: 181 HPGEVT------RVGGEEIKESSKVPCILHMDSLKGSHK-GLKDVFQSYLCEEWKERHAN 233
HPGE+ +E++ +VPCILH+DS+KGSHK GL ++F SYL EEWK RH N
Sbjct: 408 HPGELVPSHVNFHSFDDEVENPQRVPCILHLDSIKGSHKGGLINIFPSYLREEWKARHEN 467
Query: 234 VEDDLASEFLHLRFISLELPQQENLYDCGLFLLHYVECFLKEAPVNFNPFKITKFSNFLK 293
+D +S +++ ISLELPQQEN +DCGLFLLHY++ F+ +AP FNP I++ +NFL
Sbjct: 468 TTND-SSRAPNMQSISLELPQQENSFDCGLFLLHYLDLFVAQAPAKFNPSLISRSANFLT 526
Query: 294 NNWFPPAEASLKRSHIHNLIYDISGNNFLQAPPADCHDKGLSSEVSGVIKHKVDVDSPGV 353
NWFP EASLKR +I L+Y++ + PA+ + VS + + ++
Sbjct: 527 RNWFPAKEASLKRRNILELLYNLHKGHDPSILPANSKSEPPHCGVSNRNDQETESENVIE 586
Query: 354 CCYPATWHGNPSNSRSDI-QFPTASP 378
CC S++ +DI Q T SP
Sbjct: 587 CCNWIKPFDGSSSTVTDISQTKTCSP 612
>AT1G10570.1 | Symbols: OTS2, ULP1C | Cysteine proteinases
superfamily protein | chr1:3487639-3491102 FORWARD
LENGTH=571
Length = 571
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 130/266 (48%), Gaps = 32/266 (12%)
Query: 66 DEVIYPKGEP----DAVSISKRDIGLLQPETFINDTIIDFYIKYLKNKLPTDEQEKXX-- 119
+++ YP + D V +S +D+ L P ++ +I+FYI+Y+++ + + ++
Sbjct: 315 EDIYYPSSDQSDGRDLVQVSLKDLKCLSPGEYLTSPVINFYIRYVQHHVFSADKTAANCH 374
Query: 120 XXXXXXXRKLADLDKNPSSACNGREA-FQRVRKWTRKVNLFEKDYILIPINYSLHWSLVV 178
+KL + S N R+A F + R+W + +LF K YI IPI+ LHWSLV+
Sbjct: 375 FFNTFFYKKLTEA---VSYKGNDRDAYFVKFRRWWKGFDLFCKSYIFIPIHEDLHWSLVI 431
Query: 179 ICHPGEVTRVGGEEIKESSKVPCILHMDSLKGSHKGLK-DVFQSYLCEEWKERHANVEDD 237
IC P KE I+H+DSL + L + + +L EEW + + D
Sbjct: 432 ICIPD----------KEDESGLTIIHLDSLGLHPRNLIFNNVKRFLREEWNYLNQDAPLD 481
Query: 238 LASEFLHLRFI-------SLELPQQENLYDCGLFLLHYVECFLKEAPVNFNPFKITKFSN 290
L R + +++PQQ+N +DCGLFLL ++ F++EAP +
Sbjct: 482 LPISAKVWRDLPNMINEAEVQVPQQKNDFDCGLFLLFFIRRFIEEAPQRLTLQDL----K 537
Query: 291 FLKNNWFPPAEASLKRSHIHNLIYDI 316
+ WF P EAS R I N++ D+
Sbjct: 538 MIHKKWFKPEEASALRIKIWNILVDL 563
>AT1G10570.2 | Symbols: OTS2, ULP1C | Cysteine proteinases
superfamily protein | chr1:3487639-3491102 FORWARD
LENGTH=570
Length = 570
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 130/266 (48%), Gaps = 32/266 (12%)
Query: 66 DEVIYPKGEP----DAVSISKRDIGLLQPETFINDTIIDFYIKYLKNKLPTDEQEKXX-- 119
+++ YP + D V +S +D+ L P ++ +I+FYI+Y+++ + + ++
Sbjct: 314 EDIYYPSSDQSDGRDLVQVSLKDLKCLSPGEYLTSPVINFYIRYVQHHVFSADKTAANCH 373
Query: 120 XXXXXXXRKLADLDKNPSSACNGREA-FQRVRKWTRKVNLFEKDYILIPINYSLHWSLVV 178
+KL + S N R+A F + R+W + +LF K YI IPI+ LHWSLV+
Sbjct: 374 FFNTFFYKKLTEA---VSYKGNDRDAYFVKFRRWWKGFDLFCKSYIFIPIHEDLHWSLVI 430
Query: 179 ICHPGEVTRVGGEEIKESSKVPCILHMDSLKGSHKGLK-DVFQSYLCEEWKERHANVEDD 237
IC P KE I+H+DSL + L + + +L EEW + + D
Sbjct: 431 ICIPD----------KEDESGLTIIHLDSLGLHPRNLIFNNVKRFLREEWNYLNQDAPLD 480
Query: 238 LASEFLHLRFI-------SLELPQQENLYDCGLFLLHYVECFLKEAPVNFNPFKITKFSN 290
L R + +++PQQ+N +DCGLFLL ++ F++EAP +
Sbjct: 481 LPISAKVWRDLPNMINEAEVQVPQQKNDFDCGLFLLFFIRRFIEEAPQRLTLQDL----K 536
Query: 291 FLKNNWFPPAEASLKRSHIHNLIYDI 316
+ WF P EAS R I N++ D+
Sbjct: 537 MIHKKWFKPEEASALRIKIWNILVDL 562
>AT1G60220.1 | Symbols: OTS1, ULP1D | UB-like protease 1D |
chr1:22208332-22211910 FORWARD LENGTH=584
Length = 584
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 137/266 (51%), Gaps = 34/266 (12%)
Query: 66 DEVIYP-KGEPDAVSISKRDIGLLQPETFINDTIIDFYIKYLKNKLPTDEQ--EKXXXXX 122
+++ YP + +P V + +D+ L P ++ +++FY+++L+ ++ + Q
Sbjct: 330 EDICYPTRDDPHFVQVCLKDLECLAPREYLTSPVMNFYMRFLQQQISSSNQISADCHFFN 389
Query: 123 XXXXRKLADLDKNPSSACNGREAF-QRVRKWTRKVNLFEKDYILIPINYSLHWSLVVICH 181
+KL+D + N ++AF R R+W + ++LF K YI IPI+ LHWSLV++C
Sbjct: 390 TYFYKKLSDA---VTYKGNDKDAFFVRFRRWWKGIDLFRKAYIFIPIHEDLHWSLVIVCI 446
Query: 182 PGEVTRVGGEEIKESSKVPCILHMDSLK-GSHKGLKDVFQSYLCEEWKERHANVED---D 237
P + G ILH+DSL S K + + + +L +EW + N +D D
Sbjct: 447 PDKKDESG----------LTILHLDSLGLHSRKSIVENVKRFLKDEWN--YLNQDDYSLD 494
Query: 238 LA-SEFLHL---RFIS---LELPQQENLYDCGLFLLHYVECFLKEAPVNFNPFKITKFSN 290
L SE + R IS +++PQQ+N +DCG F+L +++ F++EAP + F
Sbjct: 495 LPISEKVWKNLPRRISEAVVQVPQQKNDFDCGPFVLFFIKRFIEEAPQRLKRKDLGMFD- 553
Query: 291 FLKNNWFPPAEASLKRSHIHNLIYDI 316
WF P EAS R I N + ++
Sbjct: 554 ---KKWFRPDEASALRIKIRNTLIEL 576
>AT4G15880.1 | Symbols: ESD4, ATESD4 | Cysteine proteinases
superfamily protein | chr4:9012769-9015797 FORWARD
LENGTH=489
Length = 489
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 35/205 (17%)
Query: 74 EPDAVSISKRDIGLLQPETFINDTIIDFYIKYLKNKLPTDEQE--KXXXXXXXXXRKLAD 131
E + I+ + L P ++ND +I+ Y++ LK + + ++ K +KL
Sbjct: 284 ENSNIDITGEVLQCLTPSAWLNDEVINVYLELLKERETREPKKYLKCHYFNTFFYKKLV- 342
Query: 132 LDKNPSSACNGREAFQRVRKWT--RKVN--LFEKDYILIPINYSLHWSLVVICHPGEVTR 187
S N F+ VR+WT RK+ L + D I +PI+ +HW+L VI +
Sbjct: 343 ----SDSGYN----FKAVRRWTTQRKLGYALIDCDMIFVPIHRGVHWTLAVINN------ 388
Query: 188 VGGEEIKESSKVPCILHMDSLKGSHKGLKDVFQSYLCEEWKERHANVEDDLASEFLHLRF 247
+ES +L++DSL G + + Y+ +E E+ D + + F
Sbjct: 389 ------RESK----LLYLDSLNGVDPMILNALAKYMGDEANEKSGKKID---ANSWDMEF 435
Query: 248 ISLELPQQENLYDCGLFLLHYVECF 272
+ +LPQQ+N YDCG+F+L Y++ F
Sbjct: 436 VE-DLPQQKNGYDCGMFMLKYIDFF 459
>AT3G48480.1 | Symbols: | Cysteine proteinases superfamily protein
| chr3:17957326-17959062 REVERSE LENGTH=298
Length = 298
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 17/158 (10%)
Query: 157 NLFEKDYILIPINYSLHWSLVVICHPGEVTRVGGEEIKESSKVPCILHMDSLK--GSHKG 214
+F K Y+ +PI Y HW+L++ C+ GE S C+L +DSL+ S +
Sbjct: 152 QIFSKKYVFLPIVYWSHWTLLIFCNFGEDL---------DSDKTCMLFLDSLQTTDSSQR 202
Query: 215 LKDVFQSYLCEEWKERHANVEDDLASEFLHLRFISLELPQQENLYDCGLFLLHYVECFLK 274
L+ + ++ + ++ + L E + F +PQQ N +CG F+L+Y+ F++
Sbjct: 203 LEPDIRKFVLDIYRAEGRTEDSSLVDE---IPFYVPMVPQQTNDVECGSFVLYYIHRFIE 259
Query: 275 EAPVNFNPFKITKFSNFLKNNWFPPAEASLKRSHIHNL 312
+AP NFN + FLK +WF + +H+L
Sbjct: 260 DAPENFN---VEDMPYFLKEDWFSHKDLEKFCDELHSL 294
>AT3G06910.1 | Symbols: ULP1A, ELS1, AtULP1a | UB-like protease 1A |
chr3:2178905-2181188 REVERSE LENGTH=502
Length = 502
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 42/212 (19%)
Query: 78 VSISKRDIGLLQPETFINDTIIDFYIKYLKNKLPTDEQE--KXXXXXXXXXRKLADLDKN 135
+ I+ + + L+P ++ND +I+ Y+ LK + + ++ K KL N
Sbjct: 300 IDITGKILRCLKPGKWLNDEVINLYMVLLKEREAREPKKFLKCHFFNTFFFTKLV----N 355
Query: 136 PSSACNGREAFQRVRKWTR----KVNLFEKDYILIPINYSLHWSLVVICHPGEVTRVGGE 191
++ N + VR+WT +L + D I IPI+ ++HW+L VI
Sbjct: 356 SATGYN----YGAVRRWTSMKRLGYHLKDCDKIFIPIHMNIHWTLAVI------------ 399
Query: 192 EIKESSKVPCILHMDSLKGSHKGLKDVFQSYLCEEWKERHANVEDDLASEFLHLRFISLE 251
IK+ ++DS KG + D Y +E +++ E DL F+ +
Sbjct: 400 NIKDQK----FQYLDSFKGREPKILDALARYFVDEVRDKS---EVDLDVSRWRQEFVQ-D 451
Query: 252 LPQQENLYDCGLFLLHYVE--------CFLKE 275
LP Q N +DCG+F++ Y++ CF +E
Sbjct: 452 LPMQRNGFDCGMFMVKYIDFYSRGLDLCFTQE 483
>AT4G00690.1 | Symbols: ULP1B | UB-like protease 1B |
chr4:281313-283129 FORWARD LENGTH=348
Length = 348
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 40/213 (18%)
Query: 78 VSISKRDIGLLQPETFINDTIIDFYIKYLKNKLPTDEQE--KXXXXXXXXXRKLADLDKN 135
+ IS + L+P ++ND + + Y++ LK + D Q+ K KL
Sbjct: 139 IDISGETLQCLRPNQWLNDDVTNLYLELLKERQTRDPQKYFKCHFFNTFFYVKLV----- 193
Query: 136 PSSACNGREAFQRVRKWTRK----VNLFEKDYILIPINYSLHWSLVVICHPGEVTRVGGE 191
S N ++ V +WT K +L + D I +PI+ +HW+L VI
Sbjct: 194 SGSGYN----YKAVSRWTTKRKLGYDLIDCDIIFVPIHIDIHWTLGVI------------ 237
Query: 192 EIKESSKVPCILHMDSL-KGSHKGLKDVFQSYLCEEWKER-HANVE-DDLASEFLHLRFI 248
+++ +++DSL G + + YL +E K++ N++ E++
Sbjct: 238 ----NNRERKFVYLDSLFTGVGHTILNAMAKYLVDEVKQKSQKNIDVSSWGMEYVE---- 289
Query: 249 SLELPQQENLYDCGLFLLHYVECFLKEAPVNFN 281
E PQQ+N YDCG+F+L Y++ + + + F+
Sbjct: 290 --ERPQQQNGYDCGMFMLKYIDFYSRGLSLQFS 320