Miyakogusa Predicted Gene

Lj6g3v2193400.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2193400.1 Non Chatacterized Hit- tr|A5B0M5|A5B0M5_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,71.21,2e-19,
,NODE_55945_length_321_cov_16.853582.path1.1
         (67 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G58120.1 | Symbols:  | BEST Arabidopsis thaliana protein matc...   100   2e-22
AT5G01710.1 | Symbols:  | methyltransferases | chr5:263709-26525...    61   1e-10

>AT1G58120.1 | Symbols:  | BEST Arabidopsis thaliana protein match
           is: methyltransferases (TAIR:AT5G01710.1); Has 93 Blast
           hits to 93 proteins in 15 species: Archae - 0; Bacteria
           - 0; Metazoa - 1; Fungi - 0; Plants - 92; Viruses - 0;
           Other Eukaryotes - 0 (source: NCBI BLink). |
           chr1:21520962-21522224 FORWARD LENGTH=420
          Length = 420

 Score =  100 bits (249), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 58/69 (84%), Gaps = 2/69 (2%)

Query: 1   MKAEAEVVEEMIKERTIYLVDELFLECKNEWWQKKGKR--KKSRRAYWECLALYGRLRDE 58
           MKAEAE+VEEM++ ++I +VDELFLECK +    +G++   KS RAYWECLALYG+LRDE
Sbjct: 352 MKAEAEMVEEMMRSKSIKMVDELFLECKPKGLGLRGRKMQSKSGRAYWECLALYGKLRDE 411

Query: 59  GVAVHQWWG 67
           GVAVHQWWG
Sbjct: 412 GVAVHQWWG 420


>AT5G01710.1 | Symbols:  | methyltransferases | chr5:263709-265250
           REVERSE LENGTH=513
          Length = 513

 Score = 61.2 bits (147), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 3/66 (4%)

Query: 4   EAEVVEEMIKERTIYLVDELFLECKNEWWQK--KGKR-KKSRRAYWECLALYGRLRDEGV 60
           E +++  +IK   I L+DELFLEC    WQ+   G+R +K  + Y +CL L+  LR  GV
Sbjct: 448 EFDLIPRLIKTGAICLIDELFLECHYNRWQRCCPGQRSQKYNKTYNQCLELFNSLRQRGV 507

Query: 61  AVHQWW 66
            VHQWW
Sbjct: 508 LVHQWW 513