Miyakogusa Predicted Gene

Lj6g3v2192110.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2192110.1 Non Chatacterized Hit- tr|A7UQS8|A7UQS8_MEDTR
Metal ion transporter , putative OS=Medicago truncatul,85.19,0,no
description,NULL; coiled-coil,NULL; seg,NULL; CorA,Mg2+ transporter
protein, CorA-like/Zinc trans,CUFF.60756.1
         (465 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G04305.1 | Symbols:  | Magnesium transporter CorA-like family...   561   e-160

>AT2G04305.1 | Symbols:  | Magnesium transporter CorA-like family
           protein | chr2:1501679-1503448 REVERSE LENGTH=434
          Length = 434

 Score =  561 bits (1445), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 283/440 (64%), Positives = 326/440 (74%), Gaps = 33/440 (7%)

Query: 26  HRIYHSHPASFVKKRAYVFDGLGNFYNKDWDLAYLYKKDERETVGVEGRENEFSWYHVEL 85
           HR      +  V++RAY+FDG G +YNK+WDLA             EG   EF WYHVEL
Sbjct: 28  HRFSSHQFSGMVRQRAYIFDGDGKYYNKEWDLA-------------EGTGKEFCWYHVEL 74

Query: 86  PKGNQKLSQSAQDLIGVLCPPLKLQDILSLVSNGPFCAYVDGALVFRVNSPGPPSSDFTF 145
           PKGNQKLSQSAQ LI  LCPPLKLQDIL+L SNGPFC +VDGALVFRVNSPGP SS  TF
Sbjct: 75  PKGNQKLSQSAQHLIDALCPPLKLQDILALASNGPFCGHVDGALVFRVNSPGPASSSNTF 134

Query: 146 RIAARVTENSVITVSLGRVPRLGFSRMGESLLSEIPSVESSSNFRGQQKEKSGTVIKEHV 205
           +IAAR+TENSVITVSLGRVPRLGFS MG+SLLSE+PSV                 I+EHV
Sbjct: 135 KIAARITENSVITVSLGRVPRLGFSPMGQSLLSEVPSV-----------------IEEHV 177

Query: 206 LEFLLTMNHSEEADNPVPRSVPKLVVHIIDTHVDQLQDIVTKLEIELDSVELDLDKGGYA 265
           LEFLL MNHSEEADNPVP SV  LVVHIIDTHVD+LQD+VT+LEIELD VEL++D+GG+A
Sbjct: 178 LEFLLKMNHSEEADNPVPTSVSNLVVHIIDTHVDRLQDVVTELEIELDGVELEMDRGGFA 237

Query: 266 LKKQMLDDRRFPKLHINLQRLLQVIGHGEQVYLRVKEKCSSRRWFPNEDINTLDELIGRL 325
           +KK+MLDDRRFPKLH+NLQRLLQVI HGEQV+ RVKEKCS++ WF  EDI++L+ELIGRL
Sbjct: 238 MKKKMLDDRRFPKLHLNLQRLLQVIAHGEQVFPRVKEKCSTKPWFLAEDIHSLEELIGRL 297

Query: 326 RRMKENVGFIVNRVTAIQAGLDSWQSEQINRKLYYXXXXXXXXXXXXXXTGVFGMNVGGV 385
           RR+KENVGFI NRVTAIQAGLDSWQ+EQINRKLYY              TGVFGMNVGGV
Sbjct: 298 RRLKENVGFIANRVTAIQAGLDSWQAEQINRKLYYLSFLSIIFLPLSIITGVFGMNVGGV 357

Query: 386 PWTGQNAPALKDGFRNXXXXXXXXXXXXXXXXIFPALYSHVAAAWRTKRVLGRNWSFNKK 445
           PWTGQ+ P L+DGFRN                 FPALYS +A+ W T R + R+WS N++
Sbjct: 358 PWTGQDKPELRDGFRNVMYICLIMLVLVLCCFGFPALYSRIASWWGT-RDMKRSWSLNRR 416

Query: 446 SLLRRSLRTEDSQRGGYLRI 465
           S   + +     +R GYLR+
Sbjct: 417 SF--KKIPNIVQERKGYLRL 434