Miyakogusa Predicted Gene
- Lj6g3v2172020.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v2172020.2 tr|Q9LWB7|Q9LWB7_CHERU Sucrose synthase
OS=Chenopodium rubrum GN=CSS1 PE=2 SV=1,70.76,0,Sucrose_synth,Sucrose
synthase; UDP-Glycosyltransferase/glycogen phosphorylase,NULL; SUCROSE
SYNTHAS,CUFF.60758.2
(287 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G02280.1 | Symbols: SUS3, ATSUS3 | sucrose synthase 3 | chr4:... 320 6e-88
AT5G49190.1 | Symbols: SUS2, SSA, ATSUS2 | sucrose synthase 2 | ... 320 8e-88
AT3G43190.1 | Symbols: SUS4, ATSUS4 | sucrose synthase 4 | chr3:... 239 1e-63
AT5G20830.2 | Symbols: SUS1, ASUS1, atsus1 | sucrose synthase 1 ... 229 1e-60
AT5G20830.1 | Symbols: SUS1, ASUS1, atsus1 | sucrose synthase 1 ... 229 1e-60
AT5G37180.1 | Symbols: SUS5, ATSUS5 | sucrose synthase 5 | chr5:... 164 7e-41
AT1G73370.1 | Symbols: SUS6, ATSUS6 | sucrose synthase 6 | chr1:... 155 3e-38
AT1G73370.2 | Symbols: SUS6 | sucrose synthase 6 | chr1:27584533... 155 3e-38
>AT4G02280.1 | Symbols: SUS3, ATSUS3 | sucrose synthase 3 |
chr4:995166-998719 FORWARD LENGTH=809
Length = 809
Score = 320 bits (821), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 170/302 (56%), Positives = 194/302 (64%), Gaps = 58/302 (19%)
Query: 1 MLNDRIQTPNALQHVLRKAEEFLGTLPLETPYSEFEHRFQEIGLERGWGDTAERVLESIQ 60
MLNDRIQ+ + LQ L KAE+ + L ETP+SEFE+ Q +G E+GWGDTA RVLE +
Sbjct: 195 MLNDRIQSISRLQIQLSKAEDHISKLSQETPFSEFEYALQGMGFEKGWGDTAGRVLEMMH 254
Query: 61 XXXXXXEAPDPCTLKTFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRA 120
+APDP +L+ FLG +PMVFNVVILSPHGYF Q NVLG PDTGGQVVYILDQVRA
Sbjct: 255 LLSDILQAPDPSSLEKFLGMVPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRA 314
Query: 121 LENEMLQRIKQQGLDIVPRILI-------------------------------------- 142
LE EML RIK+QGLDI P ILI
Sbjct: 315 LETEMLLRIKRQGLDISPSILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKG 374
Query: 143 ---------DVAHELAKELQGKPDLIVG-----------NYSDGNIVASSLAHKLGVTQC 182
DV L Q IVG NYSDGN+VAS +AH++GVTQC
Sbjct: 375 ILRKWISRFDVWPYLENYAQDAASEIVGELQGVPDFIIGNYSDGNLVASLMAHRMGVTQC 434
Query: 183 TIAHALEKTKYPESDIYWKKFEEKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVG 242
TIAHALEKTKYP+SDIYWK F+ KYHFSCQFTADL AMN+ DFIITST+QEIAG+K+TVG
Sbjct: 435 TIAHALEKTKYPDSDIYWKDFDNKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVG 494
Query: 243 QY 244
QY
Sbjct: 495 QY 496
>AT5G49190.1 | Symbols: SUS2, SSA, ATSUS2 | sucrose synthase 2 |
chr5:19943369-19947189 REVERSE LENGTH=807
Length = 807
Score = 320 bits (819), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 169/302 (55%), Positives = 196/302 (64%), Gaps = 58/302 (19%)
Query: 1 MLNDRIQTPNALQHVLRKAEEFLGTLPLETPYSEFEHRFQEIGLERGWGDTAERVLESIQ 60
MLNDRIQ LQ L +AEEFL LPL TPYSEFE Q +G ERGWGDTA++V E +
Sbjct: 192 MLNDRIQNIPILQGALARAEEFLSKLPLATPYSEFEFELQGMGFERGWGDTAQKVSEMVH 251
Query: 61 XXXXXXEAPDPCTLKTFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRA 120
+APDP L+TFLGRIPMVFNVVILSPHGYF Q NVLG PDTGGQVVYILDQVRA
Sbjct: 252 LLLDILQAPDPSVLETFLGRIPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRA 311
Query: 121 LE---------------------------------NEMLQRIK--------------QQG 133
LE N+ L+R+ ++G
Sbjct: 312 LENEMLLRIQKQGLEVIPKILIVTRLLPEAKGTTCNQRLERVSGTEHAHILRIPFRTEKG 371
Query: 134 L--------DIVPRILI---DVAHELAKELQGKPDLIVGNYSDGNIVASSLAHKLGVTQC 182
+ D+ P + D ++E++ ELQG P+LI+GNYSDGN+VAS LA KLGV QC
Sbjct: 372 ILRKWISRFDVWPYLETFAEDASNEISAELQGVPNLIIGNYSDGNLVASLLASKLGVIQC 431
Query: 183 TIAHALEKTKYPESDIYWKKFEEKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVG 242
IAHALEKTKYPESDIYW+ E+KYHFS QFTADL AMN+ DFIITST+QEIAGSK+ VG
Sbjct: 432 NIAHALEKTKYPESDIYWRNHEDKYHFSSQFTADLIAMNNADFIITSTYQEIAGSKNNVG 491
Query: 243 QY 244
QY
Sbjct: 492 QY 493
>AT3G43190.1 | Symbols: SUS4, ATSUS4 | sucrose synthase 4 |
chr3:15179204-15182577 REVERSE LENGTH=808
Length = 808
Score = 239 bits (611), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 116/142 (81%), Positives = 122/142 (85%)
Query: 1 MLNDRIQTPNALQHVLRKAEEFLGTLPLETPYSEFEHRFQEIGLERGWGDTAERVLESIQ 60
MLN+RIQ N LQH LRKAEE+L L ET YSEFEH+FQEIGLERGWGDTAERVL I+
Sbjct: 195 MLNNRIQNLNTLQHNLRKAEEYLMELKPETLYSEFEHKFQEIGLERGWGDTAERVLNMIR 254
Query: 61 XXXXXXEAPDPCTLKTFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRA 120
EAPDPCTL+ FLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRA
Sbjct: 255 LLLDLLEAPDPCTLENFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRA 314
Query: 121 LENEMLQRIKQQGLDIVPRILI 142
LE EMLQRIKQQGL+I PRILI
Sbjct: 315 LETEMLQRIKQQGLNITPRILI 336
Score = 199 bits (506), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 92/102 (90%), Positives = 98/102 (96%)
Query: 143 DVAHELAKELQGKPDLIVGNYSDGNIVASSLAHKLGVTQCTIAHALEKTKYPESDIYWKK 202
DVA E++KELQGKPDLI+GNYSDGN+VAS LAHKLGVTQCTIAHALEKTKYP+SDIYWKK
Sbjct: 395 DVAAEISKELQGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKK 454
Query: 203 FEEKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQY 244
+EKYHFSCQFTADL AMNHTDFIITSTFQEIAGSKDTVGQY
Sbjct: 455 LDEKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQY 496
>AT5G20830.2 | Symbols: SUS1, ASUS1, atsus1 | sucrose synthase 1 |
chr5:7050599-7054032 REVERSE LENGTH=808
Length = 808
Score = 229 bits (585), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 110/142 (77%), Positives = 121/142 (85%)
Query: 1 MLNDRIQTPNALQHVLRKAEEFLGTLPLETPYSEFEHRFQEIGLERGWGDTAERVLESIQ 60
ML+++IQ N LQH LRKAEE+L L ET Y EFE +F+EIGLERGWGD AERVL+ I+
Sbjct: 195 MLSEKIQNLNTLQHTLRKAEEYLAELKSETLYEEFEAKFEEIGLERGWGDNAERVLDMIR 254
Query: 61 XXXXXXEAPDPCTLKTFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRA 120
EAPDPCTL+TFLGR+PMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRA
Sbjct: 255 LLLDLLEAPDPCTLETFLGRVPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRA 314
Query: 121 LENEMLQRIKQQGLDIVPRILI 142
LE EMLQRIKQQGL+I PRILI
Sbjct: 315 LEIEMLQRIKQQGLNIKPRILI 336
Score = 194 bits (493), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 89/102 (87%), Positives = 97/102 (95%)
Query: 143 DVAHELAKELQGKPDLIVGNYSDGNIVASSLAHKLGVTQCTIAHALEKTKYPESDIYWKK 202
D A EL+KEL GKPDLI+GNYSDGN+VAS LAHKLGVTQCTIAHALEKTKYP+SDIYWKK
Sbjct: 395 DAAVELSKELNGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKK 454
Query: 203 FEEKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQY 244
++KYHFSCQFTAD+FAMNHTDFIITSTFQEIAGSK+TVGQY
Sbjct: 455 LDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQY 496
>AT5G20830.1 | Symbols: SUS1, ASUS1, atsus1 | sucrose synthase 1 |
chr5:7050599-7054032 REVERSE LENGTH=808
Length = 808
Score = 229 bits (585), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 110/142 (77%), Positives = 121/142 (85%)
Query: 1 MLNDRIQTPNALQHVLRKAEEFLGTLPLETPYSEFEHRFQEIGLERGWGDTAERVLESIQ 60
ML+++IQ N LQH LRKAEE+L L ET Y EFE +F+EIGLERGWGD AERVL+ I+
Sbjct: 195 MLSEKIQNLNTLQHTLRKAEEYLAELKSETLYEEFEAKFEEIGLERGWGDNAERVLDMIR 254
Query: 61 XXXXXXEAPDPCTLKTFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRA 120
EAPDPCTL+TFLGR+PMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRA
Sbjct: 255 LLLDLLEAPDPCTLETFLGRVPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRA 314
Query: 121 LENEMLQRIKQQGLDIVPRILI 142
LE EMLQRIKQQGL+I PRILI
Sbjct: 315 LEIEMLQRIKQQGLNIKPRILI 336
Score = 194 bits (493), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 89/102 (87%), Positives = 97/102 (95%)
Query: 143 DVAHELAKELQGKPDLIVGNYSDGNIVASSLAHKLGVTQCTIAHALEKTKYPESDIYWKK 202
D A EL+KEL GKPDLI+GNYSDGN+VAS LAHKLGVTQCTIAHALEKTKYP+SDIYWKK
Sbjct: 395 DAAVELSKELNGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKK 454
Query: 203 FEEKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQY 244
++KYHFSCQFTAD+FAMNHTDFIITSTFQEIAGSK+TVGQY
Sbjct: 455 LDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQY 496
>AT5G37180.1 | Symbols: SUS5, ATSUS5 | sucrose synthase 5 |
chr5:14718238-14722913 FORWARD LENGTH=836
Length = 836
Score = 164 bits (415), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 75/142 (52%), Positives = 100/142 (70%)
Query: 1 MLNDRIQTPNALQHVLRKAEEFLGTLPLETPYSEFEHRFQEIGLERGWGDTAERVLESIQ 60
M+N+ + T L+ L A+ FL LP +TP+ FE RF+E G E+GWG++A RV E+++
Sbjct: 188 MMNETLNTARKLEMSLILADVFLSELPKDTPFQAFELRFKECGFEKGWGESAGRVKETMR 247
Query: 61 XXXXXXEAPDPCTLKTFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRA 120
+APDP + F R+P +FNVVI S HGYF Q +VLG PDTGGQVVYILDQV+A
Sbjct: 248 ILSEILQAPDPQNIDRFFARVPRIFNVVIFSVHGYFGQTDVLGLPDTGGQVVYILDQVKA 307
Query: 121 LENEMLQRIKQQGLDIVPRILI 142
LE+E+LQRI QGL+ P+IL+
Sbjct: 308 LEDELLQRINSQGLNFKPQILV 329
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/166 (51%), Positives = 107/166 (64%), Gaps = 4/166 (2%)
Query: 82 PMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLQRIKQQGLDIVP--- 138
P + V L P + N P G + IL EN +L+R + DI P
Sbjct: 325 PQILVVTRLIPDAKKTKCNQELEPIFGTKYSNILRIPFVTENGILRRWVSR-FDIYPYLE 383
Query: 139 RILIDVAHELAKELQGKPDLIVGNYSDGNIVASSLAHKLGVTQCTIAHALEKTKYPESDI 198
R D ++ L+GKPDLI+GNY+DGN+VAS +A+KLG+TQ TIAHALEKTKY +SDI
Sbjct: 384 RFTKDATTKILDILEGKPDLIIGNYTDGNLVASLMANKLGITQATIAHALEKTKYEDSDI 443
Query: 199 YWKKFEEKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQY 244
WK+F+ KYHFS QFTADL +MN DFII ST+QEIAGSK+ GQY
Sbjct: 444 KWKEFDPKYHFSSQFTADLISMNSADFIIASTYQEIAGSKERAGQY 489
>AT1G73370.1 | Symbols: SUS6, ATSUS6 | sucrose synthase 6 |
chr1:27584533-27588326 REVERSE LENGTH=942
Length = 942
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/142 (54%), Positives = 91/142 (64%)
Query: 1 MLNDRIQTPNALQHVLRKAEEFLGTLPLETPYSEFEHRFQEIGLERGWGDTAERVLESIQ 60
M+ND + T LQ L A + T TPY F R +E+G E+GWGDTAERV E++
Sbjct: 199 MINDDLNTVAKLQKSLMLAVIVVSTYSKHTPYETFAQRLKEMGFEKGWGDTAERVKETMI 258
Query: 61 XXXXXXEAPDPCTLKTFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRA 120
EAPD L R+P VFNVVI S HGYF Q +VLG PDTGGQVVYILDQVRA
Sbjct: 259 ILSEVLEAPDNGKLDLLFSRLPTVFNVVIFSVHGYFGQQDVLGLPDTGGQVVYILDQVRA 318
Query: 121 LENEMLQRIKQQGLDIVPRILI 142
LE E+L RI QQGL P+IL+
Sbjct: 319 LEEELLIRINQQGLGFKPQILV 340
Score = 154 bits (388), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 76/114 (66%), Positives = 87/114 (76%), Gaps = 3/114 (2%)
Query: 134 LDIVP---RILIDVAHELAKELQGKPDLIVGNYSDGNIVASSLAHKLGVTQCTIAHALEK 190
DI P R D ++ + L KPDLI+GNY+DGN+VAS +A KLGVTQ TIAHALEK
Sbjct: 387 FDIYPYLERFTQDATSKILQRLDCKPDLIIGNYTDGNLVASLMATKLGVTQGTIAHALEK 446
Query: 191 TKYPESDIYWKKFEEKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQY 244
TKY +SD WK+ + KYHFSCQFTADL AMN TDFIITST+QEIAGSKD GQY
Sbjct: 447 TKYEDSDAKWKELDPKYHFSCQFTADLIAMNVTDFIITSTYQEIAGSKDRPGQY 500
>AT1G73370.2 | Symbols: SUS6 | sucrose synthase 6 |
chr1:27584533-27588088 REVERSE LENGTH=898
Length = 898
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/142 (54%), Positives = 91/142 (64%)
Query: 1 MLNDRIQTPNALQHVLRKAEEFLGTLPLETPYSEFEHRFQEIGLERGWGDTAERVLESIQ 60
M+ND + T LQ L A + T TPY F R +E+G E+GWGDTAERV E++
Sbjct: 155 MINDDLNTVAKLQKSLMLAVIVVSTYSKHTPYETFAQRLKEMGFEKGWGDTAERVKETMI 214
Query: 61 XXXXXXEAPDPCTLKTFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRA 120
EAPD L R+P VFNVVI S HGYF Q +VLG PDTGGQVVYILDQVRA
Sbjct: 215 ILSEVLEAPDNGKLDLLFSRLPTVFNVVIFSVHGYFGQQDVLGLPDTGGQVVYILDQVRA 274
Query: 121 LENEMLQRIKQQGLDIVPRILI 142
LE E+L RI QQGL P+IL+
Sbjct: 275 LEEELLIRINQQGLGFKPQILV 296
Score = 154 bits (388), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 76/114 (66%), Positives = 87/114 (76%), Gaps = 3/114 (2%)
Query: 134 LDIVP---RILIDVAHELAKELQGKPDLIVGNYSDGNIVASSLAHKLGVTQCTIAHALEK 190
DI P R D ++ + L KPDLI+GNY+DGN+VAS +A KLGVTQ TIAHALEK
Sbjct: 343 FDIYPYLERFTQDATSKILQRLDCKPDLIIGNYTDGNLVASLMATKLGVTQGTIAHALEK 402
Query: 191 TKYPESDIYWKKFEEKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQY 244
TKY +SD WK+ + KYHFSCQFTADL AMN TDFIITST+QEIAGSKD GQY
Sbjct: 403 TKYEDSDAKWKELDPKYHFSCQFTADLIAMNVTDFIITSTYQEIAGSKDRPGQY 456