Miyakogusa Predicted Gene

Lj6g3v2171960.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2171960.1 Non Chatacterized Hit- tr|Q9FGE8|Q9FGE8_ARATH
Putative uncharacterized protein OS=Arabidopsis
thalia,47.15,2e-19,seg,NULL,CUFF.60743.1
         (158 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G64480.1 | Symbols:  | unknown protein; Has 35333 Blast hits ...    90   6e-19

>AT5G64480.1 | Symbols:  | unknown protein; Has 35333 Blast hits to
           34131 proteins in 2444 species: Archae - 798; Bacteria -
           22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
           - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
           chr5:25778202-25778756 FORWARD LENGTH=184
          Length = 184

 Score = 90.1 bits (222), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 53/109 (48%), Positives = 71/109 (65%), Gaps = 4/109 (3%)

Query: 53  RINARAVLAEDAMRKSRKILFRELCEYLGLKEDEARENWSKMGEDEKLVLVKGFVAEWGS 112
           + N  A    +AM+KS +IL+ E C ++ LKEDE +  W+K+GE+EKLVLV+ FV EW  
Sbjct: 75  KANTVAEQRREAMKKSGEILWAEFCRHMDLKEDEMKIKWNKIGEEEKLVLVREFVDEWAG 134

Query: 113 CFHPLSARSTKQMV-EEYLNAPPP---NSPHSDTSSSALFPGFKRIIGF 157
            F PLS  S K+MV +E L++      +S  S +S S LFPG KRIIGF
Sbjct: 135 DFQPLSITSVKEMVDQECLDSDKTIESSSSSSMSSFSGLFPGLKRIIGF 183