Miyakogusa Predicted Gene

Lj6g3v2171950.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2171950.1 Non Chatacterized Hit- tr|I1ME36|I1ME36_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,86.75,0,RING/U-box,NULL; seg,NULL; C-terminal to LisH
motif.,CTLH, C-terminal LisH motif; CT11-RanBPM,CRA do,CUFF.60744.1
         (384 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G37880.1 | Symbols:  | LisH/CRA/RING-U-box domains-containing...   405   e-113
AT5G09630.1 | Symbols:  | LisH/CRA/RING-U-box domains-containing...   388   e-108
AT2G22690.2 | Symbols:  | zinc ion binding | chr2:9649820-965096...   387   e-108
AT2G22690.1 | Symbols:  | zinc ion binding | chr2:9649820-965096...   387   e-108
AT3G55070.1 | Symbols:  | LisH/CRA/RING-U-box domains-containing...   109   3e-24
AT3G55070.2 | Symbols:  | LisH/CRA/RING-U-box domains-containing...    82   9e-16
AT1G06060.1 | Symbols:  | LisH and RanBPM domains containing pro...    50   2e-06

>AT4G37880.1 | Symbols:  | LisH/CRA/RING-U-box domains-containing
           protein | chr4:17810183-17811349 FORWARD LENGTH=388
          Length = 388

 Score =  405 bits (1042), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 193/389 (49%), Positives = 270/389 (69%), Gaps = 6/389 (1%)

Query: 1   MELSSIKDAFDRVAXXXXXXXXXXXEVVDQVGREIEQALATIQS--PHDPSILDQKSILT 58
           MEL SIKDAFDRVA           E+V  + +EI++AL+ ++     D  +LD +SIL 
Sbjct: 1   MELKSIKDAFDRVATKQKLSYSKTNEIVHMLSQEIDKALSILEETPSSDTMLLDHRSILA 60

Query: 59  ELKSKLNAIGALQQLEGSHKEWNQSLSKYQKLLEKLFNPDISKAYR-NVDFDTHIINQII 117
           ++K     I  + QLE + KE + +L+KY K+LEK  NPDISKAYR NV+FDTHI+NQII
Sbjct: 61  DVKKVFMEIAPITQLEATEKELHAALTKYPKVLEKQLNPDISKAYRHNVEFDTHIVNQII 120

Query: 118 ASHFYRQGLSDLGDSIINEAGEPEATALRSQFLEMHKIIEAMRGRNIQPALSWVTANQER 177
           A+ FYRQG+ D+GD  + E GE E +  R  F+EM++I+EAM+ R+++PAL+W  +N ++
Sbjct: 121 ANFFYRQGMFDIGDCFVAETGESECST-RQSFVEMYRILEAMKRRDLEPALNWAVSNSDK 179

Query: 178 LAKIGSNLELKIHTLQFVDVLQTGTRADALKYARTYLSPFASINKDEFQKLMGCLLYAGR 237
           L +  S+LE+K+H+L F+++ +     +A+ YAR +++ FA     E QKLM  LL+  +
Sbjct: 180 LKEARSDLEMKLHSLHFLEIARGKNSKEAIDYARKHIATFADSCLPEIQKLMCSLLWNRK 239

Query: 238 LANSPYSELISSTHWEMTTEELARQFCTLMGQSYESPLSMAVAAGVAGLPTLLKLAN-VM 296
           L  SPYSE +S   W    +EL RQ+C L+G+S ESPLS+ V AG   LP LLK  N VM
Sbjct: 240 LDKSPYSEFLSPALWNNAVKELTRQYCNLLGESSESPLSITVTAGTQALPVLLKYMNVVM 299

Query: 297 AAKKQEWQEMKQLPVPVDLGKEFQFHSIFVCPVSRDQGSDENPPMLLPCSHVLCKQSIAK 356
           A KK +WQ M+QLPV   L +EFQFHS+FVCPVS++Q SD+NPPM++ C HVLCKQ+I K
Sbjct: 300 ANKKLDWQTMEQLPVDAQLSEEFQFHSVFVCPVSKEQSSDDNPPMMMSCGHVLCKQTINK 359

Query: 357 LSKNSTR-TFKCPYCPAEATVAHCRQLYF 384
           +SKN ++ +FKCPYCP +  ++ CRQL+F
Sbjct: 360 MSKNGSKSSFKCPYCPTDVDISRCRQLHF 388


>AT5G09630.1 | Symbols:  | LisH/CRA/RING-U-box domains-containing
           protein | chr5:2986016-2987176 REVERSE LENGTH=386
          Length = 386

 Score =  388 bits (997), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 187/381 (49%), Positives = 267/381 (70%), Gaps = 3/381 (0%)

Query: 5   SIKDAFDRVAXXXXXXXXXXXEVVDQVGREIEQALATIQSPHDPSILDQKSILTELKSKL 64
           +++DAFDRV+           +V+D V   I+  L  IQ  +D  + + +S+LTEL+ KL
Sbjct: 8   TVRDAFDRVSKKQKLYHSVTQDVIDLVCDGIQDTLTRIQLGNDDGV-EPESVLTELRRKL 66

Query: 65  NAIGALQQLEGSHKEWNQSLSKYQKLLEKLFNPDISKAYRNVDFDTHIINQIIASHFYRQ 124
           +A+  + QL+ SHKE   SLSK  KLLE  ++PDIS A  +VDFD +++N+I+  H YR+
Sbjct: 67  DALLPIIQLQKSHKETKWSLSKLVKLLEVSYHPDISLACFSVDFDINLVNKILIHHCYRE 126

Query: 125 GLSDLGDSIINEAGEPEATALRSQFLEMHKIIEAMRGRNIQPALSWVTANQERLAKIGSN 184
           GL D+GD ++ EAG  E T +RSQFLE H+I+++++ RNI+PA+ W+ AN+ +L +  S 
Sbjct: 127 GLFDVGDCLVKEAGREEETEVRSQFLEFHQIVDSLKLRNIEPAMRWIFANRGKLKQKSSK 186

Query: 185 LELKIHTLQFVDVLQTGTRADALKYARTYLSPFASINKDEFQKLMGCLLYAGRLANSPYS 244
           LE K+ +L++ D+L+ G   DAL+YART+ + +  ++  E QKL+ CLL+ G    SPY+
Sbjct: 187 LEFKLLSLKYCDILREGKSDDALEYARTHFTQYP-LHFKEIQKLITCLLWIGNFEKSPYA 245

Query: 245 ELISSTHWEMTTEELARQFCTLMGQSYESPLSMAVAAGVAGLPTLLKLANVMAAKKQEWQ 304
           E++S + W+  T+EL  ++  L+ Q   SPL +A++AG   LP+LLKL ++MA  KQEWQ
Sbjct: 246 EIVSPSCWDKVTKELIMEYHHLLDQPINSPLKVALSAGYESLPSLLKLVHLMALTKQEWQ 305

Query: 305 EMKQLPVPVDLGKEFQFHSIFVCPVSRDQGSDENPPMLLPCSHVLCKQSIAKLSKNST-R 363
            MKQLPVP++LG E++FHS FVCPVSRDQ S+ENPPM LPC HV+ KQS+ +LSKN   R
Sbjct: 306 AMKQLPVPLELGNEYKFHSAFVCPVSRDQSSEENPPMQLPCGHVISKQSMMRLSKNCAFR 365

Query: 364 TFKCPYCPAEATVAHCRQLYF 384
           TFKCPYCPAE   + CRQLYF
Sbjct: 366 TFKCPYCPAETLASACRQLYF 386


>AT2G22690.2 | Symbols:  | zinc ion binding | chr2:9649820-9650965
           REVERSE LENGTH=381
          Length = 381

 Score =  387 bits (995), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 186/388 (47%), Positives = 263/388 (67%), Gaps = 11/388 (2%)

Query: 1   MELSSIKDAFDRVAXXXXXXXXXXXEVVDQVGREIEQALATIQSPHDPSILDQKSILTEL 60
           MEL ++KDAFDRV            EVVD++ +EI++AL TIQ        + +S++ +L
Sbjct: 1   MELKNVKDAFDRVTKKQKLCYSKTHEVVDKMSQEIDKALKTIQED------NHESVVADL 54

Query: 61  KSKLNAIGALQQLEGSHKEWNQSLSKYQKLLEKLFNPDISKAYRNVDFDTHIINQIIASH 120
           K     I  +  LE S KE N  L+KY K L+K  NPDIS AYRNV FDTH ++QI+A  
Sbjct: 55  KKTFEEIAPINLLEASQKEINGVLTKYPKALDKTLNPDISTAYRNVKFDTHTVHQILAQF 114

Query: 121 FYRQGLSDLGDSIINEAGE--PEATALRSQFLEMHKIIEAMRGRNIQPALSWVTANQERL 178
           FYRQG+ D+GD  I+E GE  PE++  ++ F+EM+ I+EAM+ R++ PAL WV +N ++L
Sbjct: 115 FYRQGMYDVGDCFISETGEVKPESSVTKA-FMEMNMILEAMKERDLGPALKWVASNSDKL 173

Query: 179 AKIGSNLELKIHTLQFVDVLQTGTRADALKYARTYLSPFA--SINKDEFQKLMGCLLYAG 236
            +  S+LELK+H+L F+++ +  T  +A+ YAR + + ++  S    E QKLM  LL+  
Sbjct: 174 KEAKSDLELKLHSLHFLEIAKDKTSEEAINYARKHFATYSADSCCFPEIQKLMCSLLWIR 233

Query: 237 RLANSPYSELISSTHWEMTTEELARQFCTLMGQSYESPLSMAVAAGVAGLPTLLKLANVM 296
            L  SPYSE +S   W    +EL RQ+C L+G+S ESPLS+ VAAG   LPT LK  NV+
Sbjct: 234 NLNKSPYSEFLSPVLWTNAAKELTRQYCILLGESPESPLSVTVAAGSQVLPTFLKYLNVL 293

Query: 297 AAKKQEWQEMKQLPVPVDLGKEFQFHSIFVCPVSRDQGSDENPPMLLPCSHVLCKQSIAK 356
             K++EWQ M+QL VPV+L +E++F+S+FVCPVS++  S++NPPM L C HVLCKQSI +
Sbjct: 294 PEKRKEWQTMEQLLVPVELSEEYRFYSVFVCPVSKEHSSEDNPPMRLACGHVLCKQSINR 353

Query: 357 LSKNSTRTFKCPYCPAEATVAHCRQLYF 384
           +S+N +R+FKCPYCP +   + C+QLYF
Sbjct: 354 MSRNGSRSFKCPYCPTDIDASQCKQLYF 381


>AT2G22690.1 | Symbols:  | zinc ion binding | chr2:9649820-9650965
           REVERSE LENGTH=381
          Length = 381

 Score =  387 bits (995), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 186/388 (47%), Positives = 263/388 (67%), Gaps = 11/388 (2%)

Query: 1   MELSSIKDAFDRVAXXXXXXXXXXXEVVDQVGREIEQALATIQSPHDPSILDQKSILTEL 60
           MEL ++KDAFDRV            EVVD++ +EI++AL TIQ        + +S++ +L
Sbjct: 1   MELKNVKDAFDRVTKKQKLCYSKTHEVVDKMSQEIDKALKTIQED------NHESVVADL 54

Query: 61  KSKLNAIGALQQLEGSHKEWNQSLSKYQKLLEKLFNPDISKAYRNVDFDTHIINQIIASH 120
           K     I  +  LE S KE N  L+KY K L+K  NPDIS AYRNV FDTH ++QI+A  
Sbjct: 55  KKTFEEIAPINLLEASQKEINGVLTKYPKALDKTLNPDISTAYRNVKFDTHTVHQILAQF 114

Query: 121 FYRQGLSDLGDSIINEAGE--PEATALRSQFLEMHKIIEAMRGRNIQPALSWVTANQERL 178
           FYRQG+ D+GD  I+E GE  PE++  ++ F+EM+ I+EAM+ R++ PAL WV +N ++L
Sbjct: 115 FYRQGMYDVGDCFISETGEVKPESSVTKA-FMEMNMILEAMKERDLGPALKWVASNSDKL 173

Query: 179 AKIGSNLELKIHTLQFVDVLQTGTRADALKYARTYLSPFA--SINKDEFQKLMGCLLYAG 236
            +  S+LELK+H+L F+++ +  T  +A+ YAR + + ++  S    E QKLM  LL+  
Sbjct: 174 KEAKSDLELKLHSLHFLEIAKDKTSEEAINYARKHFATYSADSCCFPEIQKLMCSLLWIR 233

Query: 237 RLANSPYSELISSTHWEMTTEELARQFCTLMGQSYESPLSMAVAAGVAGLPTLLKLANVM 296
            L  SPYSE +S   W    +EL RQ+C L+G+S ESPLS+ VAAG   LPT LK  NV+
Sbjct: 234 NLNKSPYSEFLSPVLWTNAAKELTRQYCILLGESPESPLSVTVAAGSQVLPTFLKYLNVL 293

Query: 297 AAKKQEWQEMKQLPVPVDLGKEFQFHSIFVCPVSRDQGSDENPPMLLPCSHVLCKQSIAK 356
             K++EWQ M+QL VPV+L +E++F+S+FVCPVS++  S++NPPM L C HVLCKQSI +
Sbjct: 294 PEKRKEWQTMEQLLVPVELSEEYRFYSVFVCPVSKEHSSEDNPPMRLACGHVLCKQSINR 353

Query: 357 LSKNSTRTFKCPYCPAEATVAHCRQLYF 384
           +S+N +R+FKCPYCP +   + C+QLYF
Sbjct: 354 MSRNGSRSFKCPYCPTDIDASQCKQLYF 381


>AT3G55070.1 | Symbols:  | LisH/CRA/RING-U-box domains-containing
           protein | chr3:20408377-20410887 FORWARD LENGTH=418
          Length = 418

 Score =  109 bits (272), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 115/224 (51%), Gaps = 6/224 (2%)

Query: 149 FLEMHKIIEAMRGRNIQPALSWVTANQERLAKIGSNLELKIHTLQFVDVLQTGT---RAD 205
           F E  K+I+A++ R +  AL+W   N+ RL K  S  E ++   +F+++++  T      
Sbjct: 180 FREAKKVIDALKNREVASALTWCADNKTRLKKSKSKFEFQLRLQEFIELVRVDTAESYKK 239

Query: 206 ALKYARTYLSPFASINKDEFQKLMGCLLYAGRLANSPYSELISSTHWEMTTEELARQFCT 265
           A++YAR +L+ + + +  E Q ++  L +      S Y  L     W++  ++  ++FC 
Sbjct: 240 AIQYARKHLASWGTTHMKELQHVLATLAFKSTTECSKYKVLFELRQWDVLVDQFKQEFCK 299

Query: 266 LMGQSYESPLSMAVAAGVAGLPTLLKLANVMAAKKQEWQE-MKQLPVPVDLGKEFQFHSI 324
           L G + E  L++ + AG++ L T   L      +    QE  ++L +P+   K  Q HS 
Sbjct: 300 LYGMTMEPLLNIYLQAGLSALKTPYGLEEGCTKEDPLSQENFRKLALPLPFSK--QHHSK 357

Query: 325 FVCPVSRDQGSDENPPMLLPCSHVLCKQSIAKLSKNSTRTFKCP 368
            VC +S++    ENPP +LP  +V   +++ ++++ +     CP
Sbjct: 358 LVCYISKELMDTENPPQVLPNGYVYSTKALKEMAEKNGGKITCP 401


>AT3G55070.2 | Symbols:  | LisH/CRA/RING-U-box domains-containing
           protein | chr3:20408377-20410297 FORWARD LENGTH=323
          Length = 323

 Score = 81.6 bits (200), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 76/143 (53%), Gaps = 3/143 (2%)

Query: 149 FLEMHKIIEAMRGRNIQPALSWVTANQERLAKIGSNLELKIHTLQFVDVLQTGT---RAD 205
           F E  K+I+A++ R +  AL+W   N+ RL K  S  E ++   +F+++++  T      
Sbjct: 180 FREAKKVIDALKNREVASALTWCADNKTRLKKSKSKFEFQLRLQEFIELVRVDTAESYKK 239

Query: 206 ALKYARTYLSPFASINKDEFQKLMGCLLYAGRLANSPYSELISSTHWEMTTEELARQFCT 265
           A++YAR +L+ + + +  E Q ++  L +      S Y  L     W++  ++  ++FC 
Sbjct: 240 AIQYARKHLASWGTTHMKELQHVLATLAFKSTTECSKYKVLFELRQWDVLVDQFKQEFCK 299

Query: 266 LMGQSYESPLSMAVAAGVAGLPT 288
           L G + E  L++ + AG++ L T
Sbjct: 300 LYGMTMEPLLNIYLQAGLSALKT 322


>AT1G06060.1 | Symbols:  | LisH and RanBPM domains containing
           protein | chr1:1833071-1834516 FORWARD LENGTH=213
          Length = 213

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 3/151 (1%)

Query: 113 INQIIASHFYRQGLSDLGDSIINEAGEPEATALRSQFLEMHKIIEAMRGRNIQPALSWVT 172
           I+ I+ S+      ++  DS+ +  G  +    R       +II  +  R    A     
Sbjct: 16  IHSIVMSYLLHNCFNETADSLASSTGVKQPAIDRDNMERRKQIIHFILERKALKAFELTE 75

Query: 173 ANQERLAKIGSNLELKIHTLQFVDVLQTGTRADALKYARTYLSPFASINK--DEFQKLMG 230
              + L +   +L+  +  L FV+++  G   +ALK+ +T L+PF  + K  ++ + +M 
Sbjct: 76  QLAQDLLEKNKDLQFDLLCLHFVELICAGNCTEALKFGKTRLAPFGKVKKYVEKLEDVMA 135

Query: 231 CLLYAGRLANSPYSELISSTHWEMTTEELAR 261
            L Y      SP   L+SS + +   + L R
Sbjct: 136 LLAYEDP-EKSPMFHLLSSEYRQQVADNLNR 165