Miyakogusa Predicted Gene
- Lj6g3v2171830.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v2171830.1 tr|O81348|O81348_SOYBN Symbiotic ammonium
transporter OS=Glycine max GN=SAT1 PE=2 SV=1,68.3,0,HLH,
helix-loop-helix DNA-binding domain,Helix-loop-helix domain;
HLH,Helix-loop-helix domain; coile,CUFF.60734.1
(315 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G37850.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 181 4e-46
AT2G22760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 163 1e-40
AT2G22770.1 | Symbols: NAI1 | basic helix-loop-helix (bHLH) DNA-... 161 6e-40
AT2G22750.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 145 4e-35
AT2G22750.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 141 6e-34
AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type tran... 79 4e-15
AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |... 75 5e-14
AT1G12860.1 | Symbols: SCRM2, ICE2 | basic helix-loop-helix (bHL... 75 6e-14
AT5G46760.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-bind... 73 2e-13
AT4G16430.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 73 2e-13
AT1G01260.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 72 5e-13
AT1G01260.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 72 5e-13
AT1G01260.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 72 5e-13
AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 70 2e-12
AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 70 2e-12
AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 70 2e-12
AT4G09820.1 | Symbols: TT8, BHLH42 | basic helix-loop-helix (bHL... 70 2e-12
AT1G63650.3 | Symbols: EGL3 | basic helix-loop-helix (bHLH) DNA-... 69 3e-12
AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-he... 69 3e-12
AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-he... 69 3e-12
AT4G00870.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 69 5e-12
AT4G17880.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-bind... 69 5e-12
AT5G41315.1 | Symbols: GL3, MYC6.2 | basic helix-loop-helix (bHL... 66 2e-11
AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 66 3e-11
AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 66 3e-11
AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 66 3e-11
AT5G57150.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 66 4e-11
AT3G61950.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 66 4e-11
AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH) DNA-b... 65 4e-11
AT3G61950.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 65 5e-11
AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 63 3e-10
AT5G10570.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 62 5e-10
AT4G29930.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 60 1e-09
AT5G46830.1 | Symbols: ATNIG1, NIG1 | NACL-inducible gene 1 | ch... 60 2e-09
AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH) DNA... 60 3e-09
AT4G29930.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 59 3e-09
AT4G29930.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 59 3e-09
AT3G21330.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 57 2e-08
AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29, ... 57 2e-08
AT5G67110.1 | Symbols: ALC | basic helix-loop-helix (bHLH) DNA-b... 56 3e-08
AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | phytochrome interactin... 56 4e-08
AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | phytochrome interactin... 56 4e-08
AT3G24140.1 | Symbols: FMA | basic helix-loop-helix (bHLH) DNA-b... 55 5e-08
AT4G30980.1 | Symbols: LRL2 | LJRHL1-like 2 | chr4:15079489-1508... 55 6e-08
AT5G56960.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 54 1e-07
AT4G36930.1 | Symbols: SPT | basic helix-loop-helix (bHLH) DNA-b... 54 1e-07
AT2G46810.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 54 1e-07
AT5G65640.1 | Symbols: bHLH093 | beta HLH protein 93 | chr5:2623... 54 2e-07
AT2G20180.3 | Symbols: PIL5 | phytochrome interacting factor 3-l... 54 2e-07
AT2G20180.2 | Symbols: PIL5 | phytochrome interacting factor 3-l... 54 2e-07
AT2G24260.1 | Symbols: LRL1 | LJRHL1-like 1 | chr2:10319646-1032... 53 2e-07
AT2G20180.1 | Symbols: PIL5, PIF1 | phytochrome interacting fact... 53 3e-07
AT4G09180.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 53 3e-07
AT1G35460.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 52 5e-07
AT5G58010.1 | Symbols: LRL3 | LJRHL1-like 3 | chr5:23483670-2348... 52 5e-07
AT4G00480.1 | Symbols: ATMYC1, myc1 | basic helix-loop-helix (bH... 52 5e-07
AT1G51140.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 52 6e-07
AT4G00480.2 | Symbols: ATMYC1, myc1 | basic helix-loop-helix (bH... 52 7e-07
AT5G65640.2 | Symbols: bHLH093 | beta HLH protein 93 | chr5:2623... 51 9e-07
AT3G06120.1 | Symbols: MUTE | basic helix-loop-helix (bHLH) DNA-... 51 1e-06
AT2G46970.1 | Symbols: PIL1 | phytochrome interacting factor 3-l... 49 4e-06
AT4G38070.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 4e-06
AT5G62610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 4e-06
AT4G28800.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 5e-06
AT1G59640.2 | Symbols: ZCW32, BPE, BPEp | BIG PETAL P | chr1:219... 49 5e-06
AT2G40200.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 5e-06
AT5G08130.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 48 7e-06
AT5G08130.1 | Symbols: BIM1 | basic helix-loop-helix (bHLH) DNA-... 48 7e-06
AT5G53210.1 | Symbols: SPCH | basic helix-loop-helix (bHLH) DNA-... 48 9e-06
AT1G59640.1 | Symbols: ZCW32, BPE, BPEub | BIG PETAL P | chr1:21... 48 9e-06
>AT4G37850.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:17796362-17797647 REVERSE
LENGTH=328
Length = 328
Score = 181 bits (460), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 99/179 (55%), Positives = 134/179 (74%), Gaps = 6/179 (3%)
Query: 141 EHVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSALEEEQKRK 200
+H+IAERKRREKL+QRF+ALSALVPGLKKMDKASVLG+A+K++K +QE+V L EEQK++
Sbjct: 152 DHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGEL-EEQKKE 210
Query: 201 KTVESVVILKKSLC----NDAEDTSSDNGGEFDDTLPEIEARFCERNVLIRLHCLKNKGI 256
+ +ES+V++KKS N+ +SS G D LPEIE RF + +VLI++ C K KG
Sbjct: 211 RRLESMVLVKKSKLILDDNNQSFSSSCEDGFSDLDLPEIEVRFSDEDVLIKILCEKQKGH 270
Query: 257 IEKTISEIEKFHLKVINSSALTFGSFALDITIIAQMDMGFCMTGKDLVRNLRSALSSLM 315
+ K ++EIEK H+ + NSS L FG LDITIIA+ + F MT D+V++LRSALS+ +
Sbjct: 271 LAKIMAEIEKLHILITNSSVLNFGP-TLDITIIAKKESDFDMTLMDVVKSLRSALSNFI 328
>AT2G22760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9678012-9679165 FORWARD
LENGTH=295
Length = 295
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 126/176 (71%), Gaps = 5/176 (2%)
Query: 141 EHVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSALEEEQKRK 200
EHV+AERKRREKLS++FIALSAL+PGLKK DK ++L +AI +KQ+QE++ L+EE++
Sbjct: 119 EHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEEKEAT 178
Query: 201 KTVESVVILKKS-LCNDAEDTSSDNGG---EFDDTLPEIEARFCERNVLIRLHCLKNKGI 256
+ +ES++++KKS + D E S + EFD LPEIEA+ + ++LIR+ C K+KG
Sbjct: 179 RQMESMILVKKSKVFFDEEPNLSCSPSVHIEFDQALPEIEAKISQNDILIRILCEKSKGC 238
Query: 257 IEKTISEIEKFHLKVINSSALTFGSFALDITIIAQMDMGFCMTG-KDLVRNLRSAL 311
+ ++ IE F L++ NS L FG LDIT++AQMD F M+ KDLVRNLR A+
Sbjct: 239 MINILNTIENFQLRIENSIVLPFGDSTLDITVLAQMDKDFSMSILKDLVRNLRLAM 294
>AT2G22770.1 | Symbols: NAI1 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr2:9684858-9686321
FORWARD LENGTH=320
Length = 320
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 137/212 (64%), Gaps = 25/212 (11%)
Query: 126 DKKIGACHK-------LSQPH--HEHVIAERKRREKLSQRFIALSALVPGLKKMDKASVL 176
D+K+G+ K +PH EHV+AERKRR+KL++R IALSAL+PGLKK DKA+VL
Sbjct: 108 DQKVGSKRKDCVNNGGRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVL 167
Query: 177 GEAIKYLKQMQEKVSALEEEQ-KRKKTVESVVILKKSLC---------------NDAEDT 220
+AIK+LKQ+QE+V LEEE+ KK +S++++K+S +
Sbjct: 168 EDAIKHLKQLQERVKKLEEERVVTKKMDQSIILVKRSQVYLDDDSSSYSSTCSAASPLSS 227
Query: 221 SSDNGGEFDDTLPEIEARFCERNVLIRLHCLKNKGIIEKTISEIEKFHLKVINSSALTFG 280
SSD F T+P IEAR +R++LIR+HC KNKG + K +S +EKF L+V+NS L FG
Sbjct: 228 SSDEVSIFKQTMPMIEARVSDRDLLIRVHCEKNKGCMIKILSSLEKFRLEVVNSFTLPFG 287
Query: 281 SFALDITIIAQMDMGFCMTGKDLVRNLRSALS 312
+ L ITI+ +MD F +++V+N+R AL+
Sbjct: 288 NSTLVITILTKMDNKFSRPVEEVVKNIRVALA 319
>AT2G22750.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9672145-9673624 FORWARD
LENGTH=305
Length = 305
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 123/182 (67%), Gaps = 9/182 (4%)
Query: 140 HEHVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSALEEEQKR 199
+H++AERKRREKL+QRF+ALSAL+PGLKKMDKASVLG+AIK++K +QE V EEQK+
Sbjct: 125 QDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKE-YEEQKK 183
Query: 200 KKTVESVVILKKSLCNDAED-------TSSDNGGEFDDTLPEIEARFCERNVLIRLHCLK 252
+KT+ESVV++KKS E+ +S N LPEIE R ++VLI++ C K
Sbjct: 184 EKTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEVRVSGKDVLIKILCEK 243
Query: 253 NKGIIEKTISEIEKFHLKVINSSALTFGSFALDITIIAQMDMGFCMTGKDLVRNLRSALS 312
KG + K + EIEK L + NS+ L FG DI+IIAQ + F M +D+V+NL LS
Sbjct: 244 QKGNVIKIMGEIEKLGLSITNSNVLPFGP-TFDISIIAQKNNNFDMKIEDVVKNLSFGLS 302
Query: 313 SL 314
L
Sbjct: 303 KL 304
>AT2G22750.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9672145-9673624 FORWARD
LENGTH=304
Length = 304
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 123/182 (67%), Gaps = 10/182 (5%)
Query: 140 HEHVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSALEEEQKR 199
+H++AERKRREKL+QRF+ALSAL+PGLKKMDKASVLG+AIK++K +QE V EEQK+
Sbjct: 125 QDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKE-YEEQKK 183
Query: 200 KKTVESVVILKKSLCNDAED-------TSSDNGGEFDDTLPEIEARFCERNVLIRLHCLK 252
+KT+ESVV++KKS E+ +S N LPEIE R ++VLI++ C K
Sbjct: 184 EKTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEVRVSGKDVLIKILCEK 243
Query: 253 NKGIIEKTISEIEKFHLKVINSSALTFGSFALDITIIAQMDMGFCMTGKDLVRNLRSALS 312
KG + K + EIEK L + NS+ L FG DI+IIAQ + F M +D+V+NL LS
Sbjct: 244 QKGNVIKIMGEIEKLGLSITNSNVLPFGP-TFDISIIAQ-NNNFDMKIEDVVKNLSFGLS 301
Query: 313 SL 314
L
Sbjct: 302 KL 303
>AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type
transcription factor | chr2:19091187-19092887 REVERSE
LENGTH=566
Length = 566
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 48/56 (85%)
Query: 142 HVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSALEEEQ 197
HV AER+RREKL+QRF AL ++VP + KMDKAS+LG+AI Y+K++QEKV +E+E+
Sbjct: 396 HVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDER 451
>AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |
Basic helix-loop-helix (bHLH) DNA-binding family protein
| chr1:11799042-11800913 REVERSE LENGTH=623
Length = 623
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 91/172 (52%), Gaps = 17/172 (9%)
Query: 142 HVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSALEEEQKRKK 201
HV AER+RREKL+QRF AL A+VP + KMDKAS+LG+AI Y+ +++ KV E E+ + K
Sbjct: 453 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVKTESEKLQIK 512
Query: 202 TVESVVILKKSLCNDAEDTSSDNGGEFDDTLP-------EIEARFCERNVLIRLHCLKNK 254
V L+ A +S +GG+ + EIE + + +IR+ K
Sbjct: 513 NQLEEVKLEL-----AGRKASASGGDMSSSCSSIKPVGMEIEVKIIGWDAMIRVESSKRN 567
Query: 255 GIIEKTISEIEKFHLKVINSSALTFGSFALDITI-IAQMDMGFCMTGKDLVR 305
+ +S + L+V ++S S D+ I A + MGF + ++ +R
Sbjct: 568 HPAARLMSALMDLELEVNHASM----SVVNDLMIQQATVKMGFRIYTQEQLR 615
>AT1G12860.1 | Symbols: SCRM2, ICE2 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:4384758-4386392
FORWARD LENGTH=450
Length = 450
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 83/159 (52%), Gaps = 19/159 (11%)
Query: 141 EHVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSALEEEQKRK 200
++++AER+RR+KL+ R L ++VP + KMD+AS+LG+AI YLK++ ++++ L E +
Sbjct: 267 KNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHTELEST 326
Query: 201 KTVESVV------------ILKKSLCNDAEDTSSDNGGEFDDTLPEIEARFCE-RNVLIR 247
S + +K+ LC + S G + P +E R E + V I
Sbjct: 327 PPSSSSLHPLTPTPQTLSYRVKEELC-PSSSLPSPKGQQ-----PRVEVRLREGKAVNIH 380
Query: 248 LHCLKNKGIIEKTISEIEKFHLKVINSSALTFGSFALDI 286
+ C + G++ T+ ++ L V + F FALD+
Sbjct: 381 MFCGRRPGLLLSTMRALDNLGLDVQQAVISCFNGFALDV 419
>AT5G46760.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-binding
family protein | chr5:18974231-18976009 FORWARD
LENGTH=592
Length = 592
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 69/116 (59%), Gaps = 5/116 (4%)
Query: 142 HVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKV----SALEEEQ 197
HV AER+RREKL+QRF +L A+VP + KMDKAS+LG+AI Y+ +++ K+ S EE Q
Sbjct: 416 HVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQAESDKEEIQ 475
Query: 198 KRKKTVESVVILKKSLCNDAEDTSSDNGGEFDDTLP-EIEARFCERNVLIRLHCLK 252
K+ + K + A++ S N ++ EI+ + +V+IR+ C K
Sbjct: 476 KKLDGMSKEGNNGKGCGSRAKERKSSNQDSTASSIEMEIDVKIIGWDVMIRVQCGK 531
>AT4G16430.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:9267599-9269002 FORWARD
LENGTH=467
Length = 467
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 47/64 (73%)
Query: 142 HVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSALEEEQKRKK 201
HV AER+RREKL+QRF AL A+VP + KMDKAS+L +AI Y+ MQ+K+ E E++ K
Sbjct: 321 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRVYETEKQIMK 380
Query: 202 TVES 205
ES
Sbjct: 381 RRES 384
>AT1G01260.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 46/58 (79%)
Query: 142 HVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSALEEEQKR 199
HV AER+RREKL+QRF AL ++VP + KMDKAS+LG+A+ Y+ ++ K+ +E E++R
Sbjct: 434 HVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERER 491
>AT1G01260.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 46/58 (79%)
Query: 142 HVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSALEEEQKR 199
HV AER+RREKL+QRF AL ++VP + KMDKAS+LG+A+ Y+ ++ K+ +E E++R
Sbjct: 434 HVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERER 491
>AT1G01260.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 46/58 (79%)
Query: 142 HVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSALEEEQKR 199
HV AER+RREKL+QRF AL ++VP + KMDKAS+LG+A+ Y+ ++ K+ +E E++R
Sbjct: 434 HVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERER 491
>AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 86/175 (49%), Gaps = 16/175 (9%)
Query: 141 EHVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSALEEE---- 196
++++AER+RR+KL+ R L ++VP + KMD+AS+LG+AI YLK++ ++++ L E
Sbjct: 307 KNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELEST 366
Query: 197 -----QKRKKTVESVVILKKSL-CNDAEDTSSDNGGEFDDTLPEIEARFCE-RNVLIRLH 249
+ + ++L C E+ + +E R E R V I +
Sbjct: 367 PPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIHMF 426
Query: 250 CLKNKGIIEKTISEIEKFHLKVINSSALTFGSFALDITIIAQMDMGFCMTGKDLV 304
C + G++ T+ ++ L V + F FALD+ Q C G++++
Sbjct: 427 CGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDVFRAEQ-----CQEGQEIL 476
>AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 86/175 (49%), Gaps = 16/175 (9%)
Query: 141 EHVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSALEEE---- 196
++++AER+RR+KL+ R L ++VP + KMD+AS+LG+AI YLK++ ++++ L E
Sbjct: 307 KNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELEST 366
Query: 197 -----QKRKKTVESVVILKKSL-CNDAEDTSSDNGGEFDDTLPEIEARFCE-RNVLIRLH 249
+ + ++L C E+ + +E R E R V I +
Sbjct: 367 PPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIHMF 426
Query: 250 CLKNKGIIEKTISEIEKFHLKVINSSALTFGSFALDITIIAQMDMGFCMTGKDLV 304
C + G++ T+ ++ L V + F FALD+ Q C G++++
Sbjct: 427 CGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDVFRAEQ-----CQEGQEIL 476
>AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 86/175 (49%), Gaps = 16/175 (9%)
Query: 141 EHVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSALEEE---- 196
++++AER+RR+KL+ R L ++VP + KMD+AS+LG+AI YLK++ ++++ L E
Sbjct: 307 KNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELEST 366
Query: 197 -----QKRKKTVESVVILKKSL-CNDAEDTSSDNGGEFDDTLPEIEARFCE-RNVLIRLH 249
+ + ++L C E+ + +E R E R V I +
Sbjct: 367 PPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIHMF 426
Query: 250 CLKNKGIIEKTISEIEKFHLKVINSSALTFGSFALDITIIAQMDMGFCMTGKDLV 304
C + G++ T+ ++ L V + F FALD+ Q C G++++
Sbjct: 427 CGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDVFRAEQ-----CQEGQEIL 476
>AT4G09820.1 | Symbols: TT8, BHLH42 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:6182067-6186261
FORWARD LENGTH=518
Length = 518
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 25/119 (21%)
Query: 142 HVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSALE---EEQK 198
HV+AER+RREKL+++FI L ++VP + KMDK S+LG+ I Y+ ++++V LE EQ+
Sbjct: 364 HVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELENTHHEQQ 423
Query: 199 RKKTVESVVILKKSLCNDAEDTSSDNGGEFDDTLPEIEARFCERNVLIRLHCLKNKGII 257
K+T C T E+E E +VL+ + C G++
Sbjct: 424 HKRT---------RTCKRK-------------TSEEVEVSIIENDVLLEMRCEYRDGLL 460
>AT1G63650.3 | Symbols: EGL3 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:23599809-23602734
FORWARD LENGTH=596
Length = 596
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 57/83 (68%)
Query: 142 HVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSALEEEQKRKK 201
H ++E+KRREKL++RF+ L +++P + K+DK S+L + I+YL+ +Q++V LE ++
Sbjct: 406 HALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCRESAD 465
Query: 202 TVESVVILKKSLCNDAEDTSSDN 224
T + ++K+ +D E+ +S N
Sbjct: 466 TETRITMMKRKKPDDEEERASAN 488
>AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr1:23599809-23602734 FORWARD LENGTH=596
Length = 596
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 57/83 (68%)
Query: 142 HVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSALEEEQKRKK 201
H ++E+KRREKL++RF+ L +++P + K+DK S+L + I+YL+ +Q++V LE ++
Sbjct: 406 HALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCRESAD 465
Query: 202 TVESVVILKKSLCNDAEDTSSDN 224
T + ++K+ +D E+ +S N
Sbjct: 466 TETRITMMKRKKPDDEEERASAN 488
>AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr1:23599809-23602734 FORWARD LENGTH=596
Length = 596
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 57/83 (68%)
Query: 142 HVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSALEEEQKRKK 201
H ++E+KRREKL++RF+ L +++P + K+DK S+L + I+YL+ +Q++V LE ++
Sbjct: 406 HALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCRESAD 465
Query: 202 TVESVVILKKSLCNDAEDTSSDN 224
T + ++K+ +D E+ +S N
Sbjct: 466 TETRITMMKRKKPDDEEERASAN 488
>AT4G00870.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:362230-363639 REVERSE
LENGTH=423
Length = 423
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 6/85 (7%)
Query: 125 EDKKIGACHKLSQPHH----EHVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAI 180
E ++ A K + HH HV AE++RREKL+ RF AL A+VP + +MDKAS+L +A+
Sbjct: 231 ETTRVAAATK--EKHHPAVLSHVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAV 288
Query: 181 KYLKQMQEKVSALEEEQKRKKTVES 205
Y++ ++ K+ LE E K+ K E+
Sbjct: 289 SYIESLKSKIDDLETEIKKMKMTET 313
>AT4G17880.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-binding
family protein | chr4:9933702-9935471 REVERSE LENGTH=589
Length = 589
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 45/57 (78%)
Query: 142 HVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSALEEEQK 198
HV AER+RREKL+QRF +L A+VP + KMDKAS+LG+AI Y+ +++ K+ E +++
Sbjct: 417 HVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQKAESDKE 473
>AT5G41315.1 | Symbols: GL3, MYC6.2 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:16529457-16532866
FORWARD LENGTH=637
Length = 637
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 24/152 (15%)
Query: 142 HVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSALE--EEQKR 199
H + E+KRREKL++RF+ L ++P + K+DK S+L + I+YL++++ +V LE E
Sbjct: 442 HAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELESCRESTD 501
Query: 200 KKTVESVVILKKSLCNDAEDTSS---------------DNGGE-------FDDTLPEIEA 237
+T ++ + +K C+ E TS+ +N GE F +
Sbjct: 502 TETRGTMTMKRKKPCDAGERTSANCANNETGNGKKVSVNNVGEAEPADTGFTGLTDNLRI 561
Query: 238 RFCERNVLIRLHCLKNKGIIEKTISEIEKFHL 269
V+I L C +G++ + + I HL
Sbjct: 562 GSFGNEVVIELRCAWREGVLLEIMDVISDLHL 593
>AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154872 FORWARD
LENGTH=247
Length = 247
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 97/201 (48%), Gaps = 19/201 (9%)
Query: 98 IDNTALANMLISQGAFMNQNYAFKACQEDKKIGACHK-------LSQPHHEHVIAERKRR 150
I + L+N N+++ + + ++ I + S P +++++ER RR
Sbjct: 4 IVDQELSNYWEPSSFLQNEDFEYDSWPLEEAISGSYDSSSPDGAASSPASKNIVSERNRR 63
Query: 151 EKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSALEEE-QKRKKTVESVVIL 209
+KL+QR AL ++VP + KMDKAS++ +AI Y++ +Q + LE E ++ + T +S +
Sbjct: 64 QKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELESTPKSSLSF 123
Query: 210 KKSLCND---------AEDTSSDNGGEFDDTLPEIEARFC-ERNVLIRLHCLKNKGIIEK 259
K D + S + + L E++ F ER +++ + C K + K
Sbjct: 124 SKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVL-ELKVTFMGERTMVVSVTCNKRTDTMVK 182
Query: 260 TISEIEKFHLKVINSSALTFG 280
E +LK++ S+ +F
Sbjct: 183 LCEVFESLNLKILTSNLTSFS 203
>AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154556 FORWARD
LENGTH=219
Length = 219
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 82/156 (52%), Gaps = 12/156 (7%)
Query: 136 SQPHHEHVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSALEE 195
S P +++++ER RR+KL+QR AL ++VP + KMDKAS++ +AI Y++ +Q + LE
Sbjct: 50 SSPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEA 109
Query: 196 E-QKRKKTVESVVILKKSLCND---------AEDTSSDNGGEFDDTLPEIEARFC-ERNV 244
E ++ + T +S + K D + S + + L E++ F ER +
Sbjct: 110 EIRELESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVL-ELKVTFMGERTM 168
Query: 245 LIRLHCLKNKGIIEKTISEIEKFHLKVINSSALTFG 280
++ + C K + K E +LK++ S+ +F
Sbjct: 169 VVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFS 204
>AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23153293 FORWARD
LENGTH=226
Length = 226
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 82/156 (52%), Gaps = 12/156 (7%)
Query: 136 SQPHHEHVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSALEE 195
S P +++++ER RR+KL+QR AL ++VP + KMDKAS++ +AI Y++ +Q + LE
Sbjct: 50 SSPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEA 109
Query: 196 E-QKRKKTVESVVILKKSLCND---------AEDTSSDNGGEFDDTLPEIEARFC-ERNV 244
E ++ + T +S + K D + S + + L E++ F ER +
Sbjct: 110 EIRELESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVL-ELKVTFMGERTM 168
Query: 245 LIRLHCLKNKGIIEKTISEIEKFHLKVINSSALTFG 280
++ + C K + K E +LK++ S+ +F
Sbjct: 169 VVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFS 204
>AT5G57150.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154801 FORWARD
LENGTH=264
Length = 264
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 82/155 (52%), Gaps = 10/155 (6%)
Query: 136 SQPHHEHVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSALEE 195
S P +++++ER RR+KL+QR AL ++VP + KMDKAS++ +AI Y++ +Q + LE
Sbjct: 50 SSPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEA 109
Query: 196 E-QKRKKTVESVVILKKSLCND-AEDTSSDNGGEFDD-------TLPEIEARFC-ERNVL 245
E ++ + T +S + K D +S + D + E++ F ER ++
Sbjct: 110 EIRELESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFMGERTMV 169
Query: 246 IRLHCLKNKGIIEKTISEIEKFHLKVINSSALTFG 280
+ + C K + K E +LK++ S+ +F
Sbjct: 170 VSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFS 204
>AT3G61950.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:22940231-22941332 FORWARD
LENGTH=307
Length = 307
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 81/135 (60%), Gaps = 5/135 (3%)
Query: 142 HVIAERKRREKLSQRFIALSALVPG--LKKMDKASVLGEAIKYLKQMQEKVSALEEEQKR 199
H+ ER RR ++++ +L AL+P +++ D+AS++G AI Y+K +++ + +LE QKR
Sbjct: 129 HIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLES-QKR 187
Query: 200 KKTVESVVILKKSLCNDAEDTSSDNGGEFDDT--LPEIEARFCERNVLIRLHCLKNKGII 257
+ + +++ +L + + +S+D +D +P+IEA + +V +++ C K +G +
Sbjct: 188 TQQQSNSEVVENALNHLSGISSNDLWTTLEDQTCIPKIEATVIQNHVSLKVQCEKKQGQL 247
Query: 258 EKTISEIEKFHLKVI 272
K I +EK L V+
Sbjct: 248 LKGIISLEKLKLTVL 262
>AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr2:7331721-7334077
FORWARD LENGTH=571
Length = 571
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 88/178 (49%), Gaps = 29/178 (16%)
Query: 142 HVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSALEEEQKRKK 201
+++AER+RR+KL+ R AL +LVP + K+D+AS+LG+AI Y+K++Q + L++E +
Sbjct: 315 NLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEENS 374
Query: 202 TVES---------------VVILKKSL-CN--------DAE-DTSSDNGGEFDDTLPEIE 236
E V L CN D + + S+D G E + P+++
Sbjct: 375 ETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKGQEME---PQVD 431
Query: 237 -ARFCERNVLIRLHCLKNKGIIEKTISEIEKFHLKVINSSALTFGSFALDITIIAQMD 293
A+ R +++ C G + + ++ L+V N++ + S ++ + + D
Sbjct: 432 VAQLDGREFFVKVICEYKPGGFTRLMEALDSLGLEVTNANTTRYLSLVSNVFKVEKND 489
>AT3G61950.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:22939661-22941332 FORWARD
LENGTH=358
Length = 358
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 84/141 (59%), Gaps = 5/141 (3%)
Query: 142 HVIAERKRREKLSQRFIALSALVPG--LKKMDKASVLGEAIKYLKQMQEKVSALEEEQKR 199
H+ ER RR ++++ +L AL+P +++ D+AS++G AI Y+K +++ + +LE QKR
Sbjct: 180 HIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLES-QKR 238
Query: 200 KKTVESVVILKKSLCNDAEDTSSDNGGEFDDT--LPEIEARFCERNVLIRLHCLKNKGII 257
+ + +++ +L + + +S+D +D +P+IEA + +V +++ C K +G +
Sbjct: 239 TQQQSNSEVVENALNHLSGISSNDLWTTLEDQTCIPKIEATVIQNHVSLKVQCEKKQGQL 298
Query: 258 EKTISEIEKFHLKVINSSALT 278
K I +EK L V++ + T
Sbjct: 299 LKGIISLEKLKLTVLHLNITT 319
>AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14647449 FORWARD
LENGTH=225
Length = 225
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 92/189 (48%), Gaps = 16/189 (8%)
Query: 113 FMNQNYAFKACQEDKKIGACHKLSQPH--------HEHVIAERKRREKLSQRFIALSALV 164
F NQ F + ++ + S P ++V++ER RR+KL+QR AL ++V
Sbjct: 18 FQNQELEFDSWPMEEAFSGSGESSSPDGAATSPASSKNVVSERNRRQKLNQRLFALRSVV 77
Query: 165 PGLKKMDKASVLGEAIKYLKQMQEKVSALEEEQKRKKTVESVVILKKSLCNDAEDTSSDN 224
P + K+DKASV+ ++I Y++++ ++ LE E + ++ + +L + D S+
Sbjct: 78 PNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELES-------RSTLLENPMDYSTRV 130
Query: 225 GGEFDDTLPEIEARFCERNVLIRLHCLKNKGIIEKTISEIEKFHLKVINSSALTFGSFAL 284
+ L E+ V++ + C K + + + +E +L ++ ++ +F S L
Sbjct: 131 QHYPIEVLEMKVTWMGEKTVVVCITCSKKRETMVQLCKVLESLNLNILTTNFSSFTS-RL 189
Query: 285 DITIIAQMD 293
T+ Q D
Sbjct: 190 STTLFLQAD 198
>AT5G10570.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:3341357-3342877 FORWARD
LENGTH=315
Length = 315
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 102/200 (51%), Gaps = 21/200 (10%)
Query: 113 FMNQNYAFKACQEDKKIGACHKLSQPHHEHVIAERKRREKLSQRFIALSALVPGLKKMDK 172
M ++ +F + E K + KL ++++AER+RR++L+ R L ++VP + KMD+
Sbjct: 123 LMEESKSFISIGETNKKRSNKKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDR 182
Query: 173 ASVLGEAIKYLKQMQEKVSALEEEQKRKKTVE--SVVILKKSLCNDAEDTSSDNGGEFDD 230
S+LG+AI Y+K++ +K++ L+E+++ + S +I +S+ N +F
Sbjct: 183 TSILGDAIDYMKELLDKINKLQEDEQELGSNSHLSTLITNESMVR--------NSLKF-- 232
Query: 231 TLPEIEARFCERNVLIRLHCLKNKGIIEKTISEIEKFHLKVINSSALTFGSFALDITIIA 290
E++ R E N I + C G++ T+S +E L++ F F+L +
Sbjct: 233 ---EVDQR--EVNTHIDICCPTKPGLVVSTVSTLETLGLEIEQCVISCFSDFSLQASCFE 287
Query: 291 QMDMGFCMTG----KDLVRN 306
+ + +T + L+RN
Sbjct: 288 VGEQRYMVTSEATKQALIRN 307
>AT4G29930.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14647449 FORWARD
LENGTH=254
Length = 254
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 101/213 (47%), Gaps = 35/213 (16%)
Query: 113 FMNQNYAFKACQEDKKIGACHKLSQPH--------HEHVIAERKRREKLSQRFIALSALV 164
F NQ F + ++ + S P ++V++ER RR+KL+QR AL ++V
Sbjct: 18 FQNQELEFDSWPMEEAFSGSGESSSPDGAATSPASSKNVVSERNRRQKLNQRLFALRSVV 77
Query: 165 PGLKKMDKASVLGEAIKYLKQMQEKVSALEEE----QKRKKTVESVVILKKSLCNDAE-- 218
P + K+DKASV+ ++I Y++++ ++ LE E + R +E+ V + CN AE
Sbjct: 78 PNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELESRSTLLENPV--RDYDCNFAETH 135
Query: 219 --DTSSDNG---------------GEFDDTLPEIEARFC-ERNVLIRLHCLKNKGIIEKT 260
D S +N + + E++ + E+ V++ + C K + + +
Sbjct: 136 LQDFSDNNDMRSKKFKQMDYSTRVQHYPIEVLEMKVTWMGEKTVVVCITCSKKRETMVQL 195
Query: 261 ISEIEKFHLKVINSSALTFGSFALDITIIAQMD 293
+E +L ++ ++ +F S L T+ Q D
Sbjct: 196 CKVLESLNLNILTTNFSSFTS-RLSTTLFLQAD 227
>AT5G46830.1 | Symbols: ATNIG1, NIG1 | NACL-inducible gene 1 |
chr5:19002719-19004254 FORWARD LENGTH=511
Length = 511
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 16/151 (10%)
Query: 48 FTNNSPNFNHKTSTDT-QYASCQNLISFADSSHHMNQLGLVRPKEEMESPKIDNTALANM 106
+ N N N TS+ T A C +++SF ++ V+ E +P + + N+
Sbjct: 264 YLQNRYNLNFSTSSSTLARAPCGDVLSFGEN---------VKQSFENRNPNTYSDQIQNV 314
Query: 107 LISQGAFMNQNYAFKACQEDKKIGACHKLSQPHHEHVIAERKRREKLSQRFIALSALVPG 166
+ + + K ++ H +P + HV AER RREKL+ RF AL A+VP
Sbjct: 315 VPHATVMLEKKKGKKRGRK-----PAHGRDKPLN-HVEAERMRREKLNHRFYALRAVVPN 368
Query: 167 LKKMDKASVLGEAIKYLKQMQEKVSALEEEQ 197
+ KMDK S+L +A+ Y+ +++ K +E E+
Sbjct: 369 VSKMDKTSLLEDAVCYINELKSKAENVELEK 399
>AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:17863-19848
FORWARD LENGTH=399
Length = 399
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Query: 124 QEDKKIGA----CHKLSQPHHEHVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEA 179
+E+KK G K S+ H +ERKRR+K++QR L LVP K DKAS+L E
Sbjct: 196 EEEKKAGGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEV 255
Query: 180 IKYLKQMQEKVSAL 193
I+YLKQ+Q +VS +
Sbjct: 256 IEYLKQLQAQVSMM 269
>AT4G29930.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14645168 FORWARD
LENGTH=184
Length = 184
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 64/118 (54%), Gaps = 14/118 (11%)
Query: 113 FMNQNYAFKACQEDKKIGACHKLSQPH--------HEHVIAERKRREKLSQRFIALSALV 164
F NQ F + ++ + S P ++V++ER RR+KL+QR AL ++V
Sbjct: 18 FQNQELEFDSWPMEEAFSGSGESSSPDGAATSPASSKNVVSERNRRQKLNQRLFALRSVV 77
Query: 165 PGLKKMDKASVLGEAIKYLKQMQEKVSALEEE----QKRKKTVESVVILKKSLCNDAE 218
P + K+DKASV+ ++I Y++++ ++ LE E + R +E+ V + CN AE
Sbjct: 78 PNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELESRSTLLENPV--RDYDCNFAE 133
>AT4G29930.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14645505 FORWARD
LENGTH=263
Length = 263
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 113 FMNQNYAFKACQEDKKIGACHKLSQPH--------HEHVIAERKRREKLSQRFIALSALV 164
F NQ F + ++ + S P ++V++ER RR+KL+QR AL ++V
Sbjct: 18 FQNQELEFDSWPMEEAFSGSGESSSPDGAATSPASSKNVVSERNRRQKLNQRLFALRSVV 77
Query: 165 PGLKKMDKASVLGEAIKYLKQMQEKVSALEEE 196
P + K+DKASV+ ++I Y++++ ++ LE E
Sbjct: 78 PNISKLDKASVIKDSIDYMQELIDQEKTLEAE 109
>AT3G21330.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:7507720-7508841 FORWARD
LENGTH=373
Length = 373
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 103 LANMLISQGAFMNQNYAFKACQEDKKIGACHKLSQPHHEHVIAERKRREKLSQRFIALSA 162
+ M+ AF N+ + ++ K+ K+S +A R+RRE++S++ L
Sbjct: 245 MKEMIYRAAAFRPVNFGLEIVEKPKRKNV--KIST--DPQTVAARQRRERISEKIRVLQT 300
Query: 163 LVPGLKKMDKASVLGEAIKYLKQMQEKVSALE 194
LVPG KMD AS+L EA YLK ++ +V ALE
Sbjct: 301 LVPGGTKMDTASMLDEAANYLKFLRAQVKALE 332
>AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29,
ATFIT1 | FER-like regulator of iron uptake |
chr2:12004713-12005908 FORWARD LENGTH=318
Length = 318
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 79/157 (50%), Gaps = 16/157 (10%)
Query: 143 VIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSALEEEQKRKKT 202
+I+ER+RR ++ + AL +LVP + KMDKAS++G+A+ Y++++Q + L+ + +
Sbjct: 133 LISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKSDIAGLEA 192
Query: 203 VESVVILKKSLCNDAEDTSSDNGGEFDDTLPEIEARFCERNVL--------IRLHCLKNK 254
+ + DA+ T F P + + +V+ +RL C K +
Sbjct: 193 SLNSTGGYQEHAPDAQKTQP-----FRGINPPASKKIIQMDVIQVEEKGFYVRLVCNKGE 247
Query: 255 GI---IEKTISEIEKFHLKVINSSALTFGSFALDITI 288
G+ + K++ + F ++ N S+ + ++ L T+
Sbjct: 248 GVAPSLYKSLESLTSFQVQNSNLSSPSPDTYLLTYTL 284
>AT5G67110.1 | Symbols: ALC | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:26785332-26786338
REVERSE LENGTH=210
Length = 210
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 58/111 (52%), Gaps = 13/111 (11%)
Query: 96 PKIDNTALANML---ISQGAFMNQNYAFKACQEDK------KIGACHKLSQPHHE----H 142
PK N + A +S GA + Y +DK + GA + S + H
Sbjct: 39 PKSTNVSSAETFFPSVSGGAVSSVGYGVSETGQDKYAFEHKRSGAKQRNSLKRNIDAQFH 98
Query: 143 VIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSAL 193
++E+KRR K++++ AL L+P K DKAS+L EAI+YLKQ+Q +V L
Sbjct: 99 NLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTL 149
>AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | phytochrome interacting
factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524
Length = 524
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 43/63 (68%)
Query: 128 KIGACHKLSQPHHEHVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQ 187
+ G K S+ H ++ER+RR++++++ AL L+P K+DKAS+L EAI+YLK +Q
Sbjct: 334 RTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQ 393
Query: 188 EKV 190
+V
Sbjct: 394 LQV 396
>AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | phytochrome interacting
factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524
Length = 524
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 43/63 (68%)
Query: 128 KIGACHKLSQPHHEHVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQ 187
+ G K S+ H ++ER+RR++++++ AL L+P K+DKAS+L EAI+YLK +Q
Sbjct: 334 RTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQ 393
Query: 188 EKV 190
+V
Sbjct: 394 LQV 396
>AT3G24140.1 | Symbols: FMA | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr3:8715525-8717772
REVERSE LENGTH=414
Length = 414
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 92/194 (47%), Gaps = 30/194 (15%)
Query: 115 NQNYAFKACQEDKKIGACHKLSQP----HHEHVIAERKRREKLSQRFIALSALVPG--LK 168
N+N K + +K K S+ H+ ER RR+++++ L +L+PG ++
Sbjct: 168 NKNVTKKEVKSKRKRARTSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQ 227
Query: 169 KMDKASVLGEAIKYLKQMQEKVSALEEEQKRKKTVES-----------------VVILKK 211
+ D+AS++G AI++++++++ + LE +++R+ E+ V +
Sbjct: 228 RGDQASIIGGAIEFVRELEQLLQCLESQKRRRILGETGRDMTTTTTSSSSPITTVANQAQ 287
Query: 212 SLCNDAEDTSSDNGG-------EFDDTLPEIEARFCERNVLIRLHCLKNKGIIEKTISEI 264
L T + GG E L ++E + + +I++ + G + KTI+ +
Sbjct: 288 PLIITGNVTELEGGGGLREETAENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAAL 347
Query: 265 EKFHLKVINSSALT 278
E HL +++++ T
Sbjct: 348 EDLHLSILHTNITT 361
>AT4G30980.1 | Symbols: LRL2 | LJRHL1-like 2 |
chr4:15079489-15081606 REVERSE LENGTH=310
Length = 310
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 142 HVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSALEEEQKRKK 201
H IAER RRE++++R +L LVP K DKAS+L E I Y+K +Q +V L +
Sbjct: 141 HSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGA 200
Query: 202 TVESVVILKKSLCNDAEDTSSDNGGEFDDTLPEIEARFCERNV 244
S I S D GG ++T EA+ E V
Sbjct: 201 ASASSQI------------SEDAGGSHENTSSSGEAKMTEHQV 231
>AT5G56960.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
family protein | chr5:23038703-23041174 REVERSE
LENGTH=466
Length = 466
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%), Gaps = 3/76 (3%)
Query: 141 EHVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSALEEEQKRK 200
+H+I+ERKRREKL++ F AL +L+P K DKASVL A + L +Q ++S L E R
Sbjct: 289 QHMISERKRREKLNESFQALRSLLPPGTKKDKASVLSIAREQLSSLQGEISKLLE---RN 345
Query: 201 KTVESVVILKKSLCND 216
+ VE+ + ++ + ND
Sbjct: 346 REVEAKLAGEREIEND 361
>AT4G36930.1 | Symbols: SPT | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:17414167-17415945
FORWARD LENGTH=373
Length = 373
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 39/52 (75%)
Query: 142 HVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSAL 193
H ++E++RR +++++ AL +L+P K DKAS+L EAI+YLKQ+Q +V L
Sbjct: 202 HNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 253
>AT2G46810.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:19239694-19242373 FORWARD
LENGTH=371
Length = 371
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 90/162 (55%), Gaps = 8/162 (4%)
Query: 142 HVIAERKRREKLSQRFIALSALVPG--LKKMDKASVLGEAIKYLKQMQEKVSALEEEQKR 199
H+ ER RR +++ +L +++P +++ D+AS++G AI ++K +++++ +LE +++
Sbjct: 195 HIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQLQSLEAQKRS 254
Query: 200 KKTVES--VVILKKSLCNDAEDTSSDNGGEFDDTLPEIEARFCERNVLIRLHCLKNKGII 257
+++ ++ + SL N + + + E + +IEA E +V +++ C + +G +
Sbjct: 255 QQSDDNKEQIPEDNSLRNISSNKLRASNKEEQSSKLKIEATVIESHVNLKIQCTRKQGQL 314
Query: 258 EKTISEIEKFHLKV----INSSALTFGSFALDITIIAQMDMG 295
++I +EK V I S T S++ ++ + + ++G
Sbjct: 315 LRSIILLEKLRFTVLHLNITSPTNTSVSYSFNLKMEDECNLG 356
>AT5G65640.1 | Symbols: bHLH093 | beta HLH protein 93 |
chr5:26237137-26238904 FORWARD LENGTH=351
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 134 KLSQPHHEHVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSAL 193
KL ++++AER+RR++L+ R L ++VP + KMD+ S+LG+AI Y+K++ +K++ L
Sbjct: 171 KLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKL 230
Query: 194 EEEQKRKKTVESVVILKKSLCNDAEDTSSDNGGEFDDTLPEIEARFCERNVLIRLHCLKN 253
++E++ + K L D +D +++ + EI+ R + + + + C
Sbjct: 231 QDEEQELGNSNNSHHSK--LFGDLKDLNANEPLVRNSPKFEIDRR--DEDTRVDICCSPK 286
Query: 254 KGIIEKTISEIEKFHLKVINSSALTFGSFAL 284
G++ T++ +E L++ F F+L
Sbjct: 287 PGLLLSTVNTLETLGLEIEQCVISCFSDFSL 317
>AT2G20180.3 | Symbols: PIL5 | phytochrome interacting factor 3-like
5 | chr2:8704276-8706538 REVERSE LENGTH=478
Length = 478
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 38/52 (73%)
Query: 142 HVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSAL 193
H ++ERKRR+++++R AL L+P K DKAS+L EAI+Y+K +Q ++ +
Sbjct: 289 HNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMM 340
>AT2G20180.2 | Symbols: PIL5 | phytochrome interacting factor 3-like
5 | chr2:8704525-8706538 REVERSE LENGTH=478
Length = 478
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 38/52 (73%)
Query: 142 HVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSAL 193
H ++ERKRR+++++R AL L+P K DKAS+L EAI+Y+K +Q ++ +
Sbjct: 289 HNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMM 340
>AT2G24260.1 | Symbols: LRL1 | LJRHL1-like 1 |
chr2:10319646-10322177 REVERSE LENGTH=350
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 7/128 (5%)
Query: 142 HVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLK--QMQEKVSALEEEQKR 199
H IAER RRE++++R AL LVP K DKAS+L E I Y+K Q+Q KV ++
Sbjct: 149 HSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGA 208
Query: 200 KKTVESVVILKKSLCN--DAEDTSSDNGGEFDDTLPEIE---ARFCERNVLIRLHCLKNK 254
+ S N A S G +D++ E A+ E ++ + L+ K
Sbjct: 209 ASVSSQISEAGGSHGNASSAMVGGSQTAGNSNDSVTMTEHQVAKLMEEDMGSAMQYLQGK 268
Query: 255 GIIEKTIS 262
G+ IS
Sbjct: 269 GLCLMPIS 276
>AT2G20180.1 | Symbols: PIL5, PIF1 | phytochrome interacting factor
3-like 5 | chr2:8704525-8706237 REVERSE LENGTH=407
Length = 407
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 37/49 (75%)
Query: 142 HVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKV 190
H ++ERKRR+++++R AL L+P K DKAS+L EAI+Y+K +Q ++
Sbjct: 218 HNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQI 266
>AT4G09180.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:5847513-5849500 FORWARD
LENGTH=262
Length = 262
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 140 HEHVIAERKRREKLSQRFIALSALVPGL-KKMDKASVLGEAIKYLKQMQEKVSALEEEQK 198
H IAER RR ++S R L LVP + K+ + A +L EA++Y+K +Q ++ L EEQK
Sbjct: 193 HPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQELTEEQK 252
Query: 199 R 199
R
Sbjct: 253 R 253
>AT1G35460.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:13040092-13041907 FORWARD
LENGTH=259
Length = 259
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 140 HEHVIAERKRREKLSQRFIALSALVPGL-KKMDKASVLGEAIKYLKQMQEKVSALEEEQK 198
H IAER RR ++S R L LVP + K+ + A +L EA++Y+K +Q ++ L E+QK
Sbjct: 190 HPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQIQELTEQQK 249
Query: 199 RKK 201
R K
Sbjct: 250 RCK 252
>AT5G58010.1 | Symbols: LRL3 | LJRHL1-like 3 |
chr5:23483670-23484889 REVERSE LENGTH=297
Length = 297
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%)
Query: 134 KLSQPHHEHVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSAL 193
+ Q H IAER RRE++++R +L LVP K DKAS+L E I+Y++ +Q +V L
Sbjct: 102 RRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVL 161
>AT4G00480.1 | Symbols: ATMYC1, myc1 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:217106-219684
REVERSE LENGTH=526
Length = 526
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 19/182 (10%)
Query: 150 REKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSALEE--------EQKRKK 201
R K +++F L +VP + ++DK S+L IKYL++++ +V LE E++RK
Sbjct: 346 RRKENEKFSVLRTMVPTVNEVDKESILNNTIKYLQELEARVEELESCMGSVNFVERQRKT 405
Query: 202 TV---ESVVILKKSLCNDAEDTSSDNGGE------FDDTLPEIEARFCERNVLIRLHCLK 252
T +SV+I + S D DN GE F D + + E V+I + C
Sbjct: 406 TENLNDSVLIEETSGNYDDSTKIDDNSGETEQVTVFRDK-THLRVKLKETEVVIEVRCSY 464
Query: 253 NKGIIEKTISEIEKFHLKVINSSALTFGSFALDITIIAQMDMGFCMTGKDLVRNLRSALS 312
I+ + + H+ + + T F L + + A+ + + R LR +
Sbjct: 465 RDYIVADIMETLSNLHMDAFSVRSHTLNKF-LTLNLKAKFRGAAVASVGMIKRELRRVIG 523
Query: 313 SL 314
L
Sbjct: 524 DL 525
>AT1G51140.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:18943802-18945613 REVERSE
LENGTH=379
Length = 379
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 140 HEHVIAERKRREKLSQRFIALSALVPGL-KKMDKASVLGEAIKYLKQMQEKVSALEEEQK 198
H IAER RR K+S+R L LVP + + + A +L A++Y+K +QE+V ALEE +
Sbjct: 313 HPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQVKALEESRA 372
Query: 199 R 199
R
Sbjct: 373 R 373
>AT4G00480.2 | Symbols: ATMYC1, myc1 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:216866-219684
REVERSE LENGTH=580
Length = 580
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 18/150 (12%)
Query: 150 REKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSALEE--------EQKRKK 201
R K +++F L +VP + ++DK S+L IKYL++++ +V LE E++RK
Sbjct: 346 RRKENEKFSVLRTMVPTVNEVDKESILNNTIKYLQELEARVEELESCMGSVNFVERQRKT 405
Query: 202 TV---ESVVILKKSLCNDAEDTSSDNGGE------FDDTLPEIEARFCERNVLIRLHCLK 252
T +SV+I + S D DN GE F D + + E V+I + C
Sbjct: 406 TENLNDSVLIEETSGNYDDSTKIDDNSGETEQVTVFRDK-THLRVKLKETEVVIEVRCSY 464
Query: 253 NKGIIEKTISEIEKFHLKVINSSALTFGSF 282
I+ + + H+ + + T F
Sbjct: 465 RDYIVADIMETLSNLHMDAFSVRSHTLNKF 494
>AT5G65640.2 | Symbols: bHLH093 | beta HLH protein 93 |
chr5:26237137-26238635 FORWARD LENGTH=290
Length = 290
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 55/83 (66%)
Query: 116 QNYAFKACQEDKKIGACHKLSQPHHEHVIAERKRREKLSQRFIALSALVPGLKKMDKASV 175
++++ C + KL ++++AER+RR++L+ R L ++VP + KMD+ S+
Sbjct: 153 KSFSVGYCGGETNKKKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSI 212
Query: 176 LGEAIKYLKQMQEKVSALEEEQK 198
LG+AI Y+K++ +K++ L++E++
Sbjct: 213 LGDAIDYMKELLDKINKLQDEEQ 235
>AT3G06120.1 | Symbols: MUTE | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr3:1846531-1848016
FORWARD LENGTH=202
Length = 202
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 79/153 (51%), Gaps = 21/153 (13%)
Query: 142 HVIAERKRREKLSQRFIALSALVPG--LKKMDKASVLGEAIKYLKQMQEKVSALEEEQKR 199
H+ ER RR ++++ +L +L P +K+ D+AS++G I+++K++Q+ V LE +++R
Sbjct: 3 HIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKKRR 62
Query: 200 K-----------KTVE------SVVILKKSLCNDAEDTSS--DNGGEFDDTLPEIEARFC 240
K +T+E + + S + TS+ + G + +EA+
Sbjct: 63 KTLNRPSFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPHANVEAKIS 122
Query: 241 ERNVLIRLHCLKNKGIIEKTISEIEKFHLKVIN 273
NV++R+ + G + K IS +EK +V++
Sbjct: 123 GSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLH 155
>AT2G46970.1 | Symbols: PIL1 | phytochrome interacting factor 3-like
1 | chr2:19295617-19297678 REVERSE LENGTH=416
Length = 416
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 142 HVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSAL 193
H + ERKRR++ +++ AL L+P K DKAS+L EAIKY++ +Q +V +
Sbjct: 234 HKLYERKRRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRTLQLQVQMM 285
>AT4G38070.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:17876535-17882569 FORWARD
LENGTH=1513
Length = 1513
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 142 HVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKV 190
H AER+RR +++ +F L ++P L K DKASVLGE ++Y ++++ V
Sbjct: 1353 HSDAERRRRLRINSQFATLRTILPNLVKQDKASVLGETVRYFNELKKMV 1401
>AT5G62610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:25133117-25134600 REVERSE
LENGTH=281
Length = 281
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 134 KLSQPHHEHVIAERKRREKLSQRFIALSALVPGLKK-MDKASVLGEAIKYLKQMQEKVSA 192
+ Q H +AER RREK+S++ AL ++PG K + KA VL E I Y++ +Q +V
Sbjct: 156 RRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEF 215
Query: 193 L 193
L
Sbjct: 216 L 216
>AT4G28800.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14221970-14224075 FORWARD
LENGTH=445
Length = 445
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%)
Query: 125 EDKKIGACHKLSQPHHEHVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLK 184
E+ + K S+ H +AER+RREK++++ L L+P K K S L +AI+Y+K
Sbjct: 243 EEARGSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVK 302
Query: 185 QMQEKVSAL 193
+Q ++ +
Sbjct: 303 SLQSQIQGM 311
>AT1G59640.2 | Symbols: ZCW32, BPE, BPEp | BIG PETAL P |
chr1:21909635-21911030 REVERSE LENGTH=343
Length = 343
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 134 KLSQPHHEHVIAERKRREKLSQRFIALSALVPGLKK-MDKASVLGEAIKYLKQMQEKVSA 192
+ Q H +AER RREK+S+R L LVPG K + KA VL E I Y++ +Q +V
Sbjct: 139 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 198
Query: 193 L 193
L
Sbjct: 199 L 199
>AT2G40200.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:16791098-16792027 FORWARD
LENGTH=254
Length = 254
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%)
Query: 126 DKKIGACHKLSQPHHEHVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQ 185
D +G K H +AE++RR++++ AL LVP K+DKA++L I+ +K+
Sbjct: 51 DDCVGGIEKAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKE 110
Query: 186 MQEKVS 191
+++K +
Sbjct: 111 LKQKAA 116
>AT5G08130.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:2606655-2608652 REVERSE
LENGTH=408
Length = 408
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 133 HKLSQPHHEHVIAERKRREKLSQRFIALSALVPGL-KKMDKASVLGEAIKYLKQMQEKV 190
KL+ P +H E++RR K++ RF L L+P +K DKAS L E I+Y++ +QEK
Sbjct: 152 QKLNTPRSKHSATEQRRRSKINDRFQMLRQLIPNSDQKRDKASFLLEVIEYIQFLQEKA 210
>AT5G08130.1 | Symbols: BIM1 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:2606655-2608652
REVERSE LENGTH=409
Length = 409
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 133 HKLSQPHHEHVIAERKRREKLSQRFIALSALVPGL-KKMDKASVLGEAIKYLKQMQEKV 190
KL+ P +H E++RR K++ RF L L+P +K DKAS L E I+Y++ +QEK
Sbjct: 152 QKLNTPRSKHSATEQRRRSKINDRFQMLRQLIPNSDQKRDKASFLLEVIEYIQFLQEKA 210
>AT5G53210.1 | Symbols: SPCH | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:21586606-21588941
REVERSE LENGTH=364
Length = 364
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 142 HVIAERKRREKLSQRFIALSALVP--GLKKMDKASVLGEAIKYLKQMQEKVSALEEEQKR 199
HV ER RR+++++ L +L+P +K+ D+AS++G ++Y+ ++Q+ + +LE +++R
Sbjct: 104 HVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEAKKQR 163
Query: 200 KKTVE 204
K E
Sbjct: 164 KTYAE 168
>AT1G59640.1 | Symbols: ZCW32, BPE, BPEub | BIG PETAL P |
chr1:21909464-21911030 REVERSE LENGTH=264
Length = 264
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 134 KLSQPHHEHVIAERKRREKLSQRFIALSALVPGLKK-MDKASVLGEAIKYLKQMQEKVSA 192
+ Q H +AER RREK+S+R L LVPG K + KA VL E I Y++ +Q +V
Sbjct: 139 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 198
Query: 193 L 193
L
Sbjct: 199 L 199