Miyakogusa Predicted Gene

Lj6g3v2168690.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2168690.1 Non Chatacterized Hit- tr|I1KFK8|I1KFK8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,26.03,0.00000001,GNK2,Gnk2-homologous domain;
Stress-antifung,Gnk2-homologous domain,CUFF.60724.1
         (143 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G22060.1 | Symbols:  | Receptor-like protein kinase-related f...    51   2e-07
AT5G48540.1 | Symbols:  | receptor-like protein kinase-related f...    49   8e-07

>AT3G22060.1 | Symbols:  | Receptor-like protein kinase-related
           family protein | chr3:7771065-7772137 FORWARD LENGTH=252
          Length = 252

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 5/101 (4%)

Query: 10  NDTDFDDPSVV-SEGLPFMSEMA--ASAPEELSMFQTKVLNLSQNGWKRYGMAQCTRDIS 66
           N  +  DPS   S+    ++E+   A+  +   +F T   N+ +N  K YG+ QCTRD+ 
Sbjct: 150 NVKNVSDPSTFNSQTKALLTELTKKATTRDNQKLFATGEKNIGKN--KLYGLVQCTRDLK 207

Query: 67  KIDCRRCLDAQLVSFRNVIGNKRRWEIYGSNCFMWYNDYQF 107
            I C+ CL+  +    N    K    + G +C   Y  Y F
Sbjct: 208 SITCKACLNGIIGELPNCCDGKEGGRVVGGSCNFRYEIYPF 248


>AT5G48540.1 | Symbols:  | receptor-like protein kinase-related
           family protein | chr5:19669096-19669887 REVERSE
           LENGTH=263
          Length = 263

 Score = 49.3 bits (116), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 31/52 (59%)

Query: 57  GMAQCTRDISKIDCRRCLDAQLVSFRNVIGNKRRWEIYGSNCFMWYNDYQFY 108
           G+ QCTRD+S++DC +C    + SF     NK+   +  S+C++ Y  Y FY
Sbjct: 190 GLVQCTRDLSELDCAQCFATAVGSFMTTCHNKKGCRVLYSSCYVRYEFYPFY 241