Miyakogusa Predicted Gene

Lj6g3v2145460.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2145460.1 Non Chatacterized Hit- tr|I1LRT8|I1LRT8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,47.73,3e-19,seg,NULL;
DUF1218,Protein of unknown function DUF1218,CUFF.60708.1
         (176 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G21310.1 | Symbols:  | Protein of unknown function (DUF1218) ...   206   8e-54
AT2G32280.1 | Symbols:  | Protein of unknown function (DUF1218) ...   174   4e-44
AT1G11500.1 | Symbols:  | Protein of unknown function (DUF1218) ...   130   6e-31
AT1G05291.1 | Symbols:  | Protein of unknown function (DUF1218) ...    62   2e-10

>AT4G21310.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr4:11339134-11339787 REVERSE LENGTH=168
          Length = 168

 Score =  206 bits (523), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 94/162 (58%), Positives = 120/162 (74%)

Query: 1   MAKNFGFLVCILVMVLDIVAGILGIQAEIVQNKEKQMKVWGFECRHPSYQAFKXXXXXXX 60
           MA+N GF +CIL++ +D+ AGILGI+AEI QNK K +K+W FECR PSY AFK       
Sbjct: 1   MARNVGFFICILILAMDVSAGILGIEAEIAQNKVKHLKMWIFECRDPSYTAFKYGLAACI 60

Query: 61  XXXXXXXXXXXXGGCICVRSREQYQSATANRQLAVAFLIFSWIVLAVAFSMLIIGTLANS 120
                       GGC+CV SR+  + ++AN+QLAVA LIF+WI+LA+AFSMLI+GT+ANS
Sbjct: 61  LLVLAHVTANFLGGCLCVASRQDLEKSSANKQLAVASLIFTWIILAIAFSMLIVGTMANS 120

Query: 121 RSRKPCVLYNHHFLSIGGILCFIHGLFTVPYYVSATATRREE 162
           RSRK C + +H  LSIGGILCF+HGLF V YY+SATA+ RE+
Sbjct: 121 RSRKNCGISHHRVLSIGGILCFVHGLFAVAYYISATASTREQ 162


>AT2G32280.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr2:13713210-13713977 FORWARD LENGTH=163
          Length = 163

 Score =  174 bits (440), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 78/163 (47%), Positives = 110/163 (67%)

Query: 1   MAKNFGFLVCILVMVLDIVAGILGIQAEIVQNKEKQMKVWGFECRHPSYQAFKXXXXXXX 60
           M K  G LVC++++ LD+ A ILGIQAE+ QN+ K M++W FECR PS  AF+       
Sbjct: 1   MTKIGGILVCLVIVGLDVAAAILGIQAEVAQNQVKHMRLWLFECREPSQDAFRLGLGAAA 60

Query: 61  XXXXXXXXXXXXGGCICVRSREQYQSATANRQLAVAFLIFSWIVLAVAFSMLIIGTLANS 120
                       GGC+C+ S++++Q +++ RQ+++A L+ +WIV AV F  ++IGT++NS
Sbjct: 61  ILVMAHVLLNLVGGCLCICSQDEFQRSSSTRQISMACLVLTWIVFAVGFGSIVIGTMSNS 120

Query: 121 RSRKPCVLYNHHFLSIGGILCFIHGLFTVPYYVSATATRREEK 163
           +SR  C   +HHFLSIGGILCF+H LF V YYVSATA + E K
Sbjct: 121 KSRSSCGFTHHHFLSIGGILCFLHALFCVAYYVSATAAKDEAK 163


>AT1G11500.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr1:3870833-3871570 FORWARD LENGTH=184
          Length = 184

 Score =  130 bits (326), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 73/181 (40%), Positives = 99/181 (54%), Gaps = 7/181 (3%)

Query: 1   MAKNFGFLVCILVMVLDIVAGILGIQAEIVQNKE------KQMKVWGFECRH-PSYQAFK 53
           M    GFLV ++++  DI A +LGI+AEI Q+K       +  +  G  CR  PS  AF 
Sbjct: 1   MESELGFLVSVVIICADITATVLGIEAEIAQSKAPHHHHQQHSRHSGSGCRRSPSDGAFA 60

Query: 54  XXXXXXXXXXXXXXXXXXXGGCICVRSREQYQSATANRQLAVAFLIFSWIVLAVAFSMLI 113
                              GGC  +RS++ ++ ATAN+ LAVAFL+ SWI   V++S L+
Sbjct: 61  EGVAAMVLLFIVHVLANVLGGCTYIRSKQDFKRATANKILAVAFLVLSWIFFVVSYSTLM 120

Query: 114 IGTLANSRSRKPCVLYNHHFLSIGGILCFIHGLFTVPYYVSATATRREEKRQPGNPGPAI 173
           IGTLANSR+ + C L +  F  IGGI C  HG+ T  YYVSA A ++E+K        A 
Sbjct: 121 IGTLANSRTNRLCSLPHRWFFLIGGIFCLGHGVVTSAYYVSAIAAKKEDKENAQQENLAN 180

Query: 174 R 174
           R
Sbjct: 181 R 181


>AT1G05291.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr1:1541348-1542323 REVERSE LENGTH=204
          Length = 204

 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 13/168 (7%)

Query: 12  LVMVLDIVAGILGIQAEIVQNKEKQMKVWGFECRHPSYQAFKXXXXXXXXXXXXXXXXXX 71
           L + LDIVAG +G+QA+  Q   K  K+   EC+ PS  AF                   
Sbjct: 23  LTVGLDIVAGFVGLQAQAAQQYVKHDKL---ECKAPSKTAFVLGIIAVSCLATAHVSANV 79

Query: 72  XGGCICVRSREQYQSATANR-----QLAVAFLIFSWIVLAVAFSMLIIGTLANSRSRKPC 126
             GC      +   +   N+      +A  FLI  W+V      +L  G  +N+ SR  C
Sbjct: 80  I-GCSISNLFQALGALPKNKITTYFNMACLFLI--WVVGIFGALILANGIWSNTESRIRC 136

Query: 127 VLYNHHFLSIGGILCFIHGLFTVPYYVSATATRRE--EKRQPGNPGPA 172
              N+H  SIGG +CF+H + +  YY+S+   R     + +P    P+
Sbjct: 137 RFTNNHVFSIGGKVCFLHAIVSGIYYISSIVARARHFHRTKPNKTKPS 184