Miyakogusa Predicted Gene

Lj6g3v2118960.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2118960.1 Non Chatacterized Hit- tr|I1M2E4|I1M2E4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.21757
PE,90.09,0,EF_HAND_2,EF-HAND 2; CALCIUM-BINDING EF HAND FAMILY
PROTEIN,NULL; EF-HAND CALCIUM-BINDING DOMAIN CON,CUFF.60680.1
         (114 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G27280.1 | Symbols:  | Calcium-binding EF-hand family protein...   126   3e-30
AT2G46600.1 | Symbols:  | Calcium-binding EF-hand family protein...   118   7e-28
AT5G54490.1 | Symbols: PBP1 | pinoid-binding protein 1 | chr5:22...   116   4e-27

>AT4G27280.1 | Symbols:  | Calcium-binding EF-hand family protein |
           chr4:13663770-13664162 REVERSE LENGTH=130
          Length = 130

 Score =  126 bits (317), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 67/120 (55%), Positives = 83/120 (69%), Gaps = 10/120 (8%)

Query: 1   MASKKSPIV---------FEDYFPAMMEKLGTEGFMKELTNGFQLLMDTEKKVITFESLK 51
           MAS KSP           F D+ P M   LG EG + EL NGF+LLMD EK VITFESL+
Sbjct: 1   MASPKSPTRPTQQNPQPNFHDFLPTMAGNLGGEGLIGELCNGFELLMDREKGVITFESLR 60

Query: 52  RNSA-LLGLEGMSDEEIMCMLREGDIDGDGALDEMEFCTLMFRLSPALMNNSKELLEEAI 110
           RN+A +LGL  ++DE++ CM++EGD D DGAL++MEFC LMFRLSP LM  S+ L+ E I
Sbjct: 61  RNAAAVLGLGDLTDEDVRCMIKEGDFDCDGALNQMEFCVLMFRLSPDLMEASRCLVTEVI 120


>AT2G46600.1 | Symbols:  | Calcium-binding EF-hand family protein |
           chr2:19136070-19136477 FORWARD LENGTH=135
          Length = 135

 Score =  118 bits (296), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 57/113 (50%), Positives = 79/113 (69%)

Query: 2   ASKKSPIVFEDYFPAMMEKLGTEGFMKELTNGFQLLMDTEKKVITFESLKRNSALLGLEG 61
           ++ K    +ED  P M EK+  E F+ EL  GF LL D E+ +IT ESL+RNS +LG+EG
Sbjct: 14  STTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEG 73

Query: 62  MSDEEIMCMLREGDIDGDGALDEMEFCTLMFRLSPALMNNSKELLEEAIFSDL 114
           MS E+   M+REGD+DGDGAL++ EFC LM RLSP +M +++  LE+A+  +L
Sbjct: 74  MSKEDAQGMVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQEL 126


>AT5G54490.1 | Symbols: PBP1 | pinoid-binding protein 1 |
           chr5:22121458-22121841 FORWARD LENGTH=127
          Length = 127

 Score =  116 bits (290), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 57/102 (55%), Positives = 77/102 (75%), Gaps = 1/102 (0%)

Query: 10  FEDYFPAMMEKLGTEGFMKELTNGFQLLMDTEKKVITFESLKRN-SALLGLEGMSDEEIM 68
           F+D+FP M  KLG EG ++E+  GF+LLMD +K VITFESL+RN S +LGL  ++D+++ 
Sbjct: 19  FQDFFPTMAGKLGGEGLIEEICKGFELLMDKDKGVITFESLRRNASTVLGLGDLTDDDVR 78

Query: 69  CMLREGDIDGDGALDEMEFCTLMFRLSPALMNNSKELLEEAI 110
            M+ EGD D DGAL++MEFC LMFRLSP LM  S+ ++ E I
Sbjct: 79  YMINEGDFDRDGALNQMEFCVLMFRLSPELMEASRCVVTEVI 120