Miyakogusa Predicted Gene
- Lj6g3v2116830.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v2116830.1 tr|G7LHQ3|G7LHQ3_MEDTR Ubiquitin
carboxyl-terminal hydrolase OS=Medicago truncatula GN=MTR_8g067060
,55.84,0,UCH_2_1,Peptidase C19, ubiquitin carboxyl-terminal hydrolase
2, conserved site; UCH_2_2,Peptidase C1,CUFF.60668.1
(402 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G17895.1 | Symbols: UBP20 | ubiquitin-specific protease 20 | ... 303 2e-82
AT5G46740.1 | Symbols: UBP21 | ubiquitin-specific protease 21 | ... 275 6e-74
AT5G57990.1 | Symbols: UBP23 | ubiquitin-specific protease 23 | ... 222 3e-58
AT3G14400.1 | Symbols: UBP25 | ubiquitin-specific protease 25 | ... 166 3e-41
AT4G31670.1 | Symbols: UBP18 | ubiquitin-specific protease 18 | ... 154 2e-37
AT2G24640.1 | Symbols: UBP19 | ubiquitin-specific protease 19 | ... 150 1e-36
AT2G24640.2 | Symbols: UBP19 | ubiquitin-specific protease 19 | ... 150 1e-36
AT5G65450.1 | Symbols: UBP17 | ubiquitin-specific protease 17 | ... 149 3e-36
AT1G17110.1 | Symbols: UBP15 | ubiquitin-specific protease 15 | ... 146 3e-35
AT1G17110.2 | Symbols: UBP15 | ubiquitin-specific protease 15 | ... 146 3e-35
AT4G24560.1 | Symbols: UBP16 | ubiquitin-specific protease 16 | ... 145 7e-35
AT2G22310.1 | Symbols: ATUBP4, UBP4 | ubiquitin-specific proteas... 106 3e-23
AT4G39910.1 | Symbols: ATUBP3, UBP3 | ubiquitin-specific proteas... 100 1e-21
AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 | ... 100 3e-21
AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 | ... 100 3e-21
AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 99 4e-21
AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 99 4e-21
AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 99 4e-21
AT2G22310.2 | Symbols: UBP4 | ubiquitin-specific protease 4 | ch... 98 9e-21
AT4G30890.3 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 93 4e-19
AT4G30890.2 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 93 4e-19
AT4G30890.1 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 93 4e-19
AT5G10790.1 | Symbols: UBP22 | ubiquitin-specific protease 22 | ... 91 2e-18
AT3G49600.1 | Symbols: UBP26, SUP32, ATUBP26 | ubiquitin-specifi... 86 4e-17
AT5G22030.1 | Symbols: UBP8 | ubiquitin-specific protease 8 | ch... 80 2e-15
AT5G22030.2 | Symbols: UBP8 | ubiquitin-specific protease 8 | ch... 80 2e-15
AT2G40930.1 | Symbols: UBP5, ATUBP5, PDE323 | ubiquitin-specific... 71 1e-12
AT1G32850.1 | Symbols: UBP11 | ubiquitin-specific protease 11 | ... 67 2e-11
AT4G10570.1 | Symbols: UBP9 | ubiquitin-specific protease 9 | ch... 66 4e-11
AT2G32780.1 | Symbols: UBP1, ATUBP1 | ubiquitin-specific proteas... 66 5e-11
AT4G10590.1 | Symbols: UBP10 | ubiquitin-specific protease 10 | ... 65 8e-11
AT4G10590.2 | Symbols: UBP10 | ubiquitin-specific protease 10 | ... 65 8e-11
AT1G04860.1 | Symbols: UBP2, ATUBP2 | ubiquitin-specific proteas... 64 2e-10
AT4G39370.1 | Symbols: UBP27 | ubiquitin-specific protease 27 | ... 51 2e-06
>AT4G17895.1 | Symbols: UBP20 | ubiquitin-specific protease 20 |
chr4:9939914-9942698 FORWARD LENGTH=695
Length = 695
Score = 303 bits (775), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 154/320 (48%), Positives = 206/320 (64%), Gaps = 8/320 (2%)
Query: 64 PVKSVGAGVRNLGSTCFMSSILQCLTHTIKLFQGLRSYTHDCPGDAGE--FCVFCALRSH 121
PV VGAG+ NLG++CF++S+ QC THT+ L + L S+ ++ P G FCV A+R H
Sbjct: 170 PVTGVGAGLWNLGNSCFLNSVFQCFTHTVPLIESLLSFRYEVPCHCGNEFFCVIRAIRYH 229
Query: 122 MESCFTPARSVVWPIFLADNLKQFSAGFKRGNQEDAQDFMNRALNKLQGCFSEGHPNLVG 181
+E+ P R + P F DNL FS F+R QEDA +F+ L KL+ C S+ + G
Sbjct: 230 IEAALRPERCPIAPYFFFDNLNYFSPDFQRYQQEDAHEFLQAFLEKLEICGSD-RTSFRG 288
Query: 182 EI-----FGGRYVSQLRCSNCGHCSETFEAIIDLSLGIENIYTIQDALESYTKVEKVGGK 236
+I F GR +S LRC NC + SET+E + LSL IE++ T+ ALES+T+VEK+ +
Sbjct: 289 DITSQDVFSGRLISGLRCCNCDYVSETYEKSVGLSLEIEDVDTLGSALESFTRVEKLDEQ 348
Query: 237 STCNSCKQVVSMEKQLLLTQTPSVAALHLKRFRGGGISVKKIENHVFFTLELDLQPYTFG 296
TC++C + VS EKQLLL + P VA HLKRF+ G+ ++KI HV LE+DLQPY
Sbjct: 349 LTCDNCNEKVSKEKQLLLDKLPLVATFHLKRFKNNGLYMEKIYKHVKIPLEIDLQPYMRN 408
Query: 297 AENHNVELKYDLYAVVVHTGNSPNSGHYFCFVRSAPDKWHKLDDSEVTRVSGDEVLCQQA 356
+ + V KY LYA+V H G S GHY +VRSAP WH DDS+VTR+ D VL Q +
Sbjct: 409 IQENEVSTKYHLYALVEHFGYSVAYGHYSSYVRSAPKIWHHFDDSKVTRIDEDMVLSQDS 468
Query: 357 YILFYARRGTPWFSSIIEDV 376
YILFYAR GT WFSS+ E++
Sbjct: 469 YILFYAREGTRWFSSVYEEM 488
>AT5G46740.1 | Symbols: UBP21 | ubiquitin-specific protease 21 |
chr5:18965410-18968492 REVERSE LENGTH=732
Length = 732
Score = 275 bits (702), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 144/325 (44%), Positives = 196/325 (60%), Gaps = 12/325 (3%)
Query: 68 VGAGVRNLGSTCFMSSILQCLTHTIKLFQGLRSYTHDCPGDAG--EFCVFCALRSHMESC 125
VGAG+ N G+TCF++S+LQC THT+ L LRS+ + P + G +FCV ALR H+E
Sbjct: 161 VGAGLYNSGNTCFIASVLQCFTHTVPLIDSLRSFMYGNPCNCGNEKFCVMQALRDHIELA 220
Query: 126 FTPARSVVWPIFLADNLKQFSAGFKRGNQEDAQDFMNRALNKLQGC----------FSEG 175
+ + DNL FS+ F +QEDA +F+ L+KL+ C S
Sbjct: 221 LRSSGYGINIDRFRDNLTYFSSDFMINHQEDAHEFLQSFLDKLERCCLDPKNQLGSVSSQ 280
Query: 176 HPNLVGEIFGGRYVSQLRCSNCGHCSETFEAIIDLSLGIENIYTIQDALESYTKVEKVGG 235
N+V +FGG +S L C NC S TFE + SL IE++ T+ ALES+T VEK+
Sbjct: 281 DLNIVDNVFGGGLMSTLCCCNCNSVSNTFEPSLGWSLEIEDVNTLWKALESFTCVEKLED 340
Query: 236 KSTCNSCKQVVSMEKQLLLTQTPSVAALHLKRFRGGGISVKKIENHVFFTLELDLQPYTF 295
+ TC++CK+ V+ EKQL + P VA HLKRF G++++KI +H+ F LELDL P+
Sbjct: 341 QLTCDNCKEKVTKEKQLRFDKLPPVATFHLKRFTNDGVTMEKIFDHIEFPLELDLSPFMS 400
Query: 296 GAENHNVELKYDLYAVVVHTGNSPNSGHYFCFVRSAPDKWHKLDDSEVTRVSGDEVLCQQ 355
+ V +Y LYA V H G GHY +VRSAP+ WH DDS+VTR+S + VL +
Sbjct: 401 SNHDPEVSTRYHLYAFVEHIGIRATFGHYSSYVRSAPETWHNFDDSKVTRISEERVLSRP 460
Query: 356 AYILFYARRGTPWFSSIIEDVNSSY 380
AYILFYAR GTPWFSS E + + +
Sbjct: 461 AYILFYAREGTPWFSSTFEQLKTVF 485
>AT5G57990.1 | Symbols: UBP23 | ubiquitin-specific protease 23 |
chr5:23470218-23473997 REVERSE LENGTH=859
Length = 859
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 123/311 (39%), Positives = 175/311 (56%), Gaps = 17/311 (5%)
Query: 66 KSVGAGVRNLGSTCFMSSILQCLTHTIKLFQGLRSYTHDCPGDAGEFCVFCALRSHMESC 125
+ +GAG++NLG+TCF++S+LQCLT+T L L++ H FC CA++ H+ +
Sbjct: 103 RKIGAGLQNLGNTCFLNSVLQCLTYTEPLAATLQTAAHQKYCHVAGFCALCAIQKHVRTA 162
Query: 126 FTPARSVVWPIFLADNLKQFSAGFKRGNQEDAQDFMNRALNKLQGC-FSEGHP------- 177
++ P L NL+ S F+ QEDA ++M L + C G P
Sbjct: 163 RQANGRILAPKDLVSNLRCISRNFRNCRQEDAHEYMINLLECMHKCSLPSGVPSESSDAY 222
Query: 178 --NLVGEIFGGRYVSQLRCSNCGHCSETFEAIIDLSLGIENIYTIQDALESYTKVEKV-- 233
+LV +IFGG SQ++C C HCS F+ +DLSL I ++Q AL +T VE +
Sbjct: 223 RRSLVHKIFGGSLRSQVKCEQCSHCSNKFDPFLDLSLDISKADSLQRALSRFTAVELLDN 282
Query: 234 GGKS-TCNSCKQVVSMEKQLLLTQTPSVAALHLKRFRGGGISVKKIENHVFFTLELDLQP 292
G K C CKQ V +KQL +++ P V +HLKRF +KI+ V FT +D++P
Sbjct: 283 GAKVYQCERCKQKVKAKKQLTVSKAPYVLTVHLKRFEAH--RSEKIDRKVDFTSAIDMKP 340
Query: 293 YTFGAENHNVELKYDLYAVVVHTGNSPNSGHYFCFVRSAPDKWHKLDDSEVTRVSGDEVL 352
+ G H LKY LY V+VH G S +SGHY CFVR++ W+ LDD+ V +VS V
Sbjct: 341 FVSGP--HEGNLKYTLYGVLVHYGRSSHSGHYACFVRTSSGMWYSLDDNRVVQVSEKTVF 398
Query: 353 CQQAYILFYAR 363
Q+AY+LFY R
Sbjct: 399 NQKAYMLFYVR 409
>AT3G14400.1 | Symbols: UBP25 | ubiquitin-specific protease 25 |
chr3:4811953-4815210 REVERSE LENGTH=661
Length = 661
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 182/337 (54%), Gaps = 24/337 (7%)
Query: 71 GVRNLGSTCFMSSILQCLTHTIKLFQGLRSYTHD------CPGDAGEFCVFCALRSHMES 124
G+RNLG+TC+++S+LQCLT T L ++ H G+ C FC + +
Sbjct: 25 GLRNLGNTCYLNSVLQCLTFTPPLANFCLTHKHSSHCDTYVDGERKRDCPFCIVEKRIAR 84
Query: 125 CFTPARSVVWPIFLADNLKQFSAGFKRGNQEDAQDFM--------NRALNKLQGCFSEGH 176
+ + P ++ LK F+ FK G QEDA +F+ N +L + ++
Sbjct: 85 SLSVDLTTDAPNKISSCLKIFAEHFKLGRQEDAHEFLRYVIDACHNTSLRLKKLRYNGNE 144
Query: 177 P----NLVGEIFGGRYVSQLRCSNCGHCSETFEAIIDLSLGIENIYTIQDALESYTKVEK 232
P ++V EIFGG SQ++C +CG S + I+D+SL I +++++L+ + + E
Sbjct: 145 PFNGNSVVKEIFGGALQSQVKCLSCGAESNKADEIMDISLEILQSSSVKESLQKFFQSEI 204
Query: 233 VGG--KSTCNSCKQVVSMEKQLLLTQTPSVAALHLKRFRGGGISVKKIENHVFFTLELDL 290
+ G K C SC+++V+ KQ+ + Q P++ + LKRF GGI KI+ + F L L
Sbjct: 205 LDGNNKYRCESCEKLVTARKQMSILQAPNILVIQLKRF--GGIFGGKIDKAISFGEILVL 262
Query: 291 QPYTFGAENHNVELKYDLYAVVVHTGNSPNSGHYFCFVRSAPDKWHKLDDSEVTRVSGDE 350
+ A + + + +Y L+ ++VH+G SP SGHY+ +V+ + +W+ +DS V+ + E
Sbjct: 263 SNFMSKA-SKDPQPEYKLFGIIVHSGFSPESGHYYAYVKDSLGRWYCCNDSFVSLSTLQE 321
Query: 351 VLCQQAYILFYARRGT-PWFSSIIEDVNSSYPHSGSG 386
VL ++AYILF++R P + + N + H +G
Sbjct: 322 VLSEKAYILFFSRSNQRPASAKTLVTSNGTTSHEVNG 358
>AT4G31670.1 | Symbols: UBP18 | ubiquitin-specific protease 18 |
chr4:15336007-15339506 REVERSE LENGTH=631
Length = 631
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 161/311 (51%), Gaps = 24/311 (7%)
Query: 71 GVRNLGSTCFMSSILQCLTHTIKLFQGLRSYTHDCPGDAGEFCVFCALRSHMESCFTPAR 130
G+ N G++CF + ILQCL+ T L L H ++C C ++H+E + +R
Sbjct: 169 GLMNCGNSCFANVILQCLSWTRPLVAYLLEKGHKRECMRNDWCFLCEFQTHVERA-SQSR 227
Query: 131 SVVWPIFLADNLKQFSAGFKRGNQEDAQDFMNRALNKLQG-CFSE-----------GHPN 178
P+ + L G QEDA +FM A++ +Q C E
Sbjct: 228 FPFSPMNIISRLTNIGGTLGYGRQEDAHEFMRYAIDMMQSVCLDEFGGEKIVPPRSQETT 287
Query: 179 LVGEIFGGRYVSQLRCSNCGHCSETFEAIIDLSLGIE-NIYTIQDALESYTKVEKVGGKS 237
L+ IFGG SQ++C+ C H S+ +E ++DL + + + ++++ L+ +T E + G +
Sbjct: 288 LIQYIFGGLLQSQVQCTVCNHVSDQYENMMDLIVEMHGDAGSLEECLDQFTAEEWLHGDN 347
Query: 238 T--CNSCKQVVSMEKQLLLTQTPSVAALHLKRFRGGGISVKKIENHVFFTLELDLQPY-T 294
C+ C V K+L + + P++ + LKR++GG K+ + F LDL PY +
Sbjct: 348 MYKCDRCSDYVKACKRLTIRRAPNILTIALKRYQGGRYG--KLNKRISFPETLDLNPYMS 405
Query: 295 FGAENHNVELKYDLYAVVVHTG--NSPNSGHYFCFVRSAPDKWHKLDDSEVTRVSGDEVL 352
G + +V Y LYAV+VH N+ GHY C+++ W+++DDSE+ V ++VL
Sbjct: 406 EGGDGSDV---YKLYAVIVHLDMLNASFFGHYICYIKDFCGNWYRIDDSEIESVELEDVL 462
Query: 353 CQQAYILFYAR 363
Q+AY+L Y+R
Sbjct: 463 SQRAYMLLYSR 473
>AT2G24640.1 | Symbols: UBP19 | ubiquitin-specific protease 19 |
chr2:10475613-10479341 REVERSE LENGTH=672
Length = 672
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 158/311 (50%), Gaps = 24/311 (7%)
Query: 71 GVRNLGSTCFMSSILQCLTHTIKLFQGLRSYTHDCPGDAGEFCVFCALRSHMESCFTPAR 130
G+ N G++CF + +LQCL+ T L L H ++C C +H++ +R
Sbjct: 175 GLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKRECRRNDWCFLCEFENHLDRA-NYSR 233
Query: 131 SVVWPIFLADNLKQFSAGFKRGNQEDAQDFMNRALNKLQG-CFSE-----------GHPN 178
P+ + L G QEDA + M A++ +Q C E
Sbjct: 234 FPFSPMNIISRLPNIGGNLGYGRQEDAHELMRFAIDMMQSVCLDEFGGEKVVPPRAQETT 293
Query: 179 LVGEIFGGRYVSQLRCSNCGHCSETFEAIIDLSLGIE-NIYTIQDALESYTKVEKVGGKS 237
L+ IFGG SQ++C+ C + S+ +E ++DL++ I + ++++ L+ +T E + G +
Sbjct: 294 LIQYIFGGLLQSQVQCTACSNVSDQYENMMDLTVEIHGDAVSLEECLDQFTAKEWLQGDN 353
Query: 238 --TCNSCKQVVSMEKQLLLTQTPSVAALHLKRFRGGGISVKKIENHVFFTLELDLQPY-T 294
C+ C V K+L + P++ + LKRF+GG K+ + F DL PY +
Sbjct: 354 LYKCDRCDDYVKACKRLSIRCAPNILTIALKRFQGGRFG--KLNKRISFPETFDLGPYMS 411
Query: 295 FGAENHNVELKYDLYAVVVHTG--NSPNSGHYFCFVRSAPDKWHKLDDSEVTRVSGDEVL 352
G E +V Y LYAV+VH N+ GHY C+V+ W+++DDSEV +V ++VL
Sbjct: 412 GGGEGSDV---YKLYAVIVHLDMLNASFFGHYICYVKDFRGNWYRIDDSEVEKVELEDVL 468
Query: 353 CQQAYILFYAR 363
Q+AY+L Y+R
Sbjct: 469 SQRAYMLLYSR 479
>AT2G24640.2 | Symbols: UBP19 | ubiquitin-specific protease 19 |
chr2:10475613-10478388 REVERSE LENGTH=502
Length = 502
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 158/311 (50%), Gaps = 24/311 (7%)
Query: 71 GVRNLGSTCFMSSILQCLTHTIKLFQGLRSYTHDCPGDAGEFCVFCALRSHMESCFTPAR 130
G+ N G++CF + +LQCL+ T L L H ++C C +H++ +R
Sbjct: 5 GLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKRECRRNDWCFLCEFENHLDRA-NYSR 63
Query: 131 SVVWPIFLADNLKQFSAGFKRGNQEDAQDFMNRALNKLQG-CFSE-----------GHPN 178
P+ + L G QEDA + M A++ +Q C E
Sbjct: 64 FPFSPMNIISRLPNIGGNLGYGRQEDAHELMRFAIDMMQSVCLDEFGGEKVVPPRAQETT 123
Query: 179 LVGEIFGGRYVSQLRCSNCGHCSETFEAIIDLSLGIE-NIYTIQDALESYTKVEKVGGKS 237
L+ IFGG SQ++C+ C + S+ +E ++DL++ I + ++++ L+ +T E + G +
Sbjct: 124 LIQYIFGGLLQSQVQCTACSNVSDQYENMMDLTVEIHGDAVSLEECLDQFTAKEWLQGDN 183
Query: 238 --TCNSCKQVVSMEKQLLLTQTPSVAALHLKRFRGGGISVKKIENHVFFTLELDLQPY-T 294
C+ C V K+L + P++ + LKRF+GG K+ + F DL PY +
Sbjct: 184 LYKCDRCDDYVKACKRLSIRCAPNILTIALKRFQGGRFG--KLNKRISFPETFDLGPYMS 241
Query: 295 FGAENHNVELKYDLYAVVVHTG--NSPNSGHYFCFVRSAPDKWHKLDDSEVTRVSGDEVL 352
G E +V Y LYAV+VH N+ GHY C+V+ W+++DDSEV +V ++VL
Sbjct: 242 GGGEGSDV---YKLYAVIVHLDMLNASFFGHYICYVKDFRGNWYRIDDSEVEKVELEDVL 298
Query: 353 CQQAYILFYAR 363
Q+AY+L Y+R
Sbjct: 299 SQRAYMLLYSR 309
>AT5G65450.1 | Symbols: UBP17 | ubiquitin-specific protease 17 |
chr5:26157863-26161096 FORWARD LENGTH=731
Length = 731
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 154/307 (50%), Gaps = 18/307 (5%)
Query: 71 GVRNLGSTCFMSSILQCLTHTIKLFQGLRSYTHDCPGDAGEFCVFCALRSHMESCFTPAR 130
G+ NLG++C+ +++LQCL T L L H +C C H+
Sbjct: 330 GLVNLGNSCYANAVLQCLAFTRPLISYLIRGLHSKTCRKKSWCFVCEF-EHLILKARGGE 388
Query: 131 SVVWPIFLADNLKQFSAGFKRGNQEDAQDFMNRALNKLQGCFSEGHP---------NLVG 181
S + PI + L++ G +EDA +F+ A++ +Q F + P LVG
Sbjct: 389 SPLSPIKILSKLQKIGKHLGPGKEEDAHEFLRCAVDTMQSVFLKEAPAAGPFAEETTLVG 448
Query: 182 EIFGGRYVSQLRCSNCGHCSETFEAIIDLSLGIE-NIYTIQDALESYTKVEKVGGKST-- 238
FGG S+++C C H SE E ++DL++ I+ +I ++++AL +T E + G++
Sbjct: 449 LTFGGYLHSKIKCMACLHKSERPELMMDLTVEIDGDIGSLEEALAQFTAYEVLDGENRYF 508
Query: 239 CNSCKQVVSMEKQLLLTQTPSVAALHLKRFRGGGISVKKIENHVFFTLELDLQPYTFGAE 298
C CK +K+L++ + P++ + LKRF+ K+ + F LD+ PY
Sbjct: 509 CGRCKSYQKAKKKLMILEGPNILTVVLKRFQSDNFG--KLSKPIHFPELLDISPY-MSDP 565
Query: 299 NHNVELKYDLYAVVVHTGNSPN--SGHYFCFVRSAPDKWHKLDDSEVTRVSGDEVLCQQA 356
NH Y LYAVVVH SGHY C++++ W K+DDS V V + VL + A
Sbjct: 566 NHGDHPVYSLYAVVVHLDAMSTLFSGHYVCYIKTLDGDWFKIDDSNVFPVQLETVLLEGA 625
Query: 357 YILFYAR 363
Y+L YAR
Sbjct: 626 YMLLYAR 632
>AT1G17110.1 | Symbols: UBP15 | ubiquitin-specific protease 15 |
chr1:5845816-5849889 REVERSE LENGTH=924
Length = 924
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/312 (31%), Positives = 161/312 (51%), Gaps = 26/312 (8%)
Query: 71 GVRNLGSTCFMSSILQCLTHTIKLFQGL--RSYTHDCPGDAGEFCVFCALRSHMESCFTP 128
G+ N G++C+ +++LQ LT T L L RS++ C G ++C+ C L H+
Sbjct: 439 GLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSGK--DWCLMCELEQHVMMLRES 496
Query: 129 ARSVVWPIFLADNLKQFSAGFKRGNQEDAQDFMNRALNKLQGCFSE------------GH 176
+ L+ +++ + G+QEDA +F+ + +Q E
Sbjct: 497 GGPLSASRILS-HMRSINCQIGDGSQEDAHEFLRLLVASMQSICLERLGGETKVDPRLQE 555
Query: 177 PNLVGEIFGGRYVSQLRCSNCGHCSETFEAIIDLSLGIEN-IYTIQDALESYTKVEKVGG 235
LV +FGGR S+++C C H SE +E I+DL+L I + ++QDAL +T+ E + G
Sbjct: 556 TTLVQHMFGGRLRSKVKCLRCDHESERYENIMDLTLEIYGWVESLQDALTQFTRPEDLDG 615
Query: 236 KST--CNSCKQVVSMEKQLLLTQTPSVAALHLKRFRGGGISVKKIENHVFFTLELDLQPY 293
++ C+ C V K+L + + P++ + LKRF+ G KI + F LD+ P
Sbjct: 616 ENMYRCSRCAGYVRARKELSIHEAPNILTIVLKRFQEGRYG--KINKCISFPEMLDMIP- 672
Query: 294 TFGAENHNVELKYDLYAVVVH--TGNSPNSGHYFCFVRSAPDKWHKLDDSEVTRVSGDEV 351
F +V Y LYAV+VH T N+ SGHY +V+ W+++DDSE+ V +V
Sbjct: 673 -FMTRTGDVPPLYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHPVPMTQV 731
Query: 352 LCQQAYILFYAR 363
+ + AY+LFY R
Sbjct: 732 MSEGAYMLFYMR 743
>AT1G17110.2 | Symbols: UBP15 | ubiquitin-specific protease 15 |
chr1:5845816-5849889 REVERSE LENGTH=928
Length = 928
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/312 (31%), Positives = 161/312 (51%), Gaps = 26/312 (8%)
Query: 71 GVRNLGSTCFMSSILQCLTHTIKLFQGL--RSYTHDCPGDAGEFCVFCALRSHMESCFTP 128
G+ N G++C+ +++LQ LT T L L RS++ C G ++C+ C L H+
Sbjct: 443 GLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSGK--DWCLMCELEQHVMMLRES 500
Query: 129 ARSVVWPIFLADNLKQFSAGFKRGNQEDAQDFMNRALNKLQGCFSE------------GH 176
+ L+ +++ + G+QEDA +F+ + +Q E
Sbjct: 501 GGPLSASRILS-HMRSINCQIGDGSQEDAHEFLRLLVASMQSICLERLGGETKVDPRLQE 559
Query: 177 PNLVGEIFGGRYVSQLRCSNCGHCSETFEAIIDLSLGIEN-IYTIQDALESYTKVEKVGG 235
LV +FGGR S+++C C H SE +E I+DL+L I + ++QDAL +T+ E + G
Sbjct: 560 TTLVQHMFGGRLRSKVKCLRCDHESERYENIMDLTLEIYGWVESLQDALTQFTRPEDLDG 619
Query: 236 KST--CNSCKQVVSMEKQLLLTQTPSVAALHLKRFRGGGISVKKIENHVFFTLELDLQPY 293
++ C+ C V K+L + + P++ + LKRF+ G KI + F LD+ P
Sbjct: 620 ENMYRCSRCAGYVRARKELSIHEAPNILTIVLKRFQEGRYG--KINKCISFPEMLDMIP- 676
Query: 294 TFGAENHNVELKYDLYAVVVH--TGNSPNSGHYFCFVRSAPDKWHKLDDSEVTRVSGDEV 351
F +V Y LYAV+VH T N+ SGHY +V+ W+++DDSE+ V +V
Sbjct: 677 -FMTRTGDVPPLYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHPVPMTQV 735
Query: 352 LCQQAYILFYAR 363
+ + AY+LFY R
Sbjct: 736 MSEGAYMLFYMR 747
>AT4G24560.1 | Symbols: UBP16 | ubiquitin-specific protease 16 |
chr4:12679493-12684528 REVERSE LENGTH=1008
Length = 1008
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 150/310 (48%), Gaps = 23/310 (7%)
Query: 71 GVRNLGSTCFMSSILQCLTHTIKLFQGLRSYTHDCPGDAGEFCVFCALRSHMESCFTPAR 130
G+ N+G++CF + + QCL T L H E C C + +
Sbjct: 543 GLINVGNSCFANVVFQCLMFTPPLTTYFLQQFHSRACTKKEQCFTCGFEKLVVKA-KEEK 601
Query: 131 SVVWPIFLADNLKQFSAGFKRGNQEDAQDFMNRALNKLQG-CFSEGH-----------PN 178
S + P L L+ G +EDA +F+ ++ +Q C
Sbjct: 602 SPLSPNGLLSQLQNIGIFLGNGKEEDAHEFLRFVVDTMQSVCIKASEYDMTKSSKLEDTT 661
Query: 179 LVGEIFGGRYVSQLRCSNCGHCSETFEAIIDLSLGIE-NIYTIQDALESYTKVEKVGG-- 235
L+G FGG S+++C C SE E ++DL++ I+ +I T+ DAL +T+ E + G
Sbjct: 662 LIGLTFGGYLRSKIKCMKCQVKSELREKMMDLTVEIDGDISTLDDALRRFTRTEILDGEN 721
Query: 236 KSTCNSCKQVVSMEKQLLLTQTPSVAALHLKRFRGGGISVKKIENHVFFTLELDLQPYTF 295
K C SCK +K+L +T+ P+V + LKRF+ G K+ + F LDL PY
Sbjct: 722 KYRCGSCKSYERAKKKLKITEPPNVLTIALKRFQAGKFG--KLNKLIRFPETLDLAPYVS 779
Query: 296 GAENHNVELKYDLYAVVVHTG--NSPNSGHYFCFVRSAPDKWHKLDDSEVTRVSGDEVLC 353
G + + Y LY V+VH N+ SGHY C++R+ +KW+K DDS V + +L
Sbjct: 780 GGSEKSHD--YKLYGVIVHLDVMNAAFSGHYVCYIRNQ-NKWYKADDSTVVTSDVERILT 836
Query: 354 QQAYILFYAR 363
+ AY+LFYAR
Sbjct: 837 KGAYMLFYAR 846
>AT2G22310.1 | Symbols: ATUBP4, UBP4 | ubiquitin-specific protease 4
| chr2:9476733-9478825 REVERSE LENGTH=365
Length = 365
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 141/347 (40%), Gaps = 57/347 (16%)
Query: 71 GVRNLGSTCFMSSILQCLTHTIKLFQGLRSYTHDCPGDAGEFCVFCA--LRSHMESCFTP 128
G N G+TC+ +S+LQ L + L + + DA E + C L S + S
Sbjct: 24 GFENFGNTCYCNSVLQALYFCAPFREQLLEHYANNKADAEENLLTCLADLFSQISSQ-KK 82
Query: 129 ARSVVWPIFLADNLKQFSAGFKRGNQEDAQDFMNRALNKL-------------------- 168
V+ P LK+ + F+ +DA +F+N LN+L
Sbjct: 83 KTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNELVEILEKETQATKADNETSSS 142
Query: 169 -------------QGCFSEGHPNLVGEIFGGRYVSQLRCSNCGHCSETFEAIIDLSLGIE 215
G E V +IF G ++ RC C + E +DLSL IE
Sbjct: 143 PEKIANVLKAPLANGVHKEPIVTWVHKIFQGILTNETRCLRCETVTARDETFLDLSLDIE 202
Query: 216 NIYTIQDALESYTKVEKVGGKST--CNSCKQVVSMEKQLLLTQTPSVAALHLKRFRGGGI 273
+I L++++ E + + C+ C + +K++ + + P + +HLKRF+
Sbjct: 203 QNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYMEQ 262
Query: 274 --SVKKIENHVFFTLELDLQPYTFGAENHNVELKYDLYAVVVHTGNSPNSGHYFCFVRSA 331
KK+ V F LEL L + V+++Y L+AVVVH G+ PN GHY V+S
Sbjct: 263 LGRYKKLSYRVVFPLELKLS----NTVDEYVDIEYSLFAVVVHVGSGPNHGHYVSLVKSH 318
Query: 332 PDKWHKLDDSEVTRVSGDEVL------------CQQAYILFYARRGT 366
+ W DD V + V YIL Y GT
Sbjct: 319 -NHWLFFDDESVEIIEESAVQTFFGSSQEYSSNTDHGYILLYESLGT 364
>AT4G39910.1 | Symbols: ATUBP3, UBP3 | ubiquitin-specific protease 3
| chr4:18511858-18514139 REVERSE LENGTH=371
Length = 371
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 142/355 (40%), Gaps = 70/355 (19%)
Query: 71 GVRNLGSTCFMSSILQCLTHTIKLFQGLRSY--THDCPGDAGEFCVFCA--LRSHMESCF 126
G N G+TC+ +S+LQ L + + L Y ++ DA E + C L S + S
Sbjct: 24 GFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKSVADAEENLMTCLADLFSQISSQ- 82
Query: 127 TPARSVVWPIFLADNLKQFSAGFKRGNQEDAQDFMNRALNKLQGCF-------------- 172
V+ P LK+ + F+ +DA +F+N LN++
Sbjct: 83 KKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNEVVDILEKEAKATKTEHETS 142
Query: 173 ----------------------SEGHPNLVGEIFGGRYVSQLRCSNCGHCSETFEAIIDL 210
E V IF G ++ RC C + E +DL
Sbjct: 143 SSSSPEKIANGLKVPQANGVVHKEPIVTWVHNIFQGILTNETRCLRCETVTARDETFLDL 202
Query: 211 SLGIENIYTIQDALESYTKVEKVGGKST--CNSCKQVVSMEKQLLLTQTPSVAALHLKRF 268
SL IE +I L++++ E + + C+ C + +K++ + + P + +HLKRF
Sbjct: 203 SLDIEQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRF 262
Query: 269 RGGGI--SVKKIENHVFFTLELDL----QPYTFGAENHNVELKYDLYAVVVHTGNSPNSG 322
+ KK+ V F LEL L +PY +++Y L+AVVVH G+ PN G
Sbjct: 263 KYIEQLGRYKKLSYRVVFPLELKLSNTVEPYA--------DVEYSLFAVVVHVGSGPNHG 314
Query: 323 HYFCFVRSAPDKWHKLDDSEVTRVSGDEVL------------CQQAYILFYARRG 365
HY V+S + W DD V + V YILFY G
Sbjct: 315 HYVSLVKSH-NHWLFFDDENVEMIEESAVQTFFGSSQEYSSNTDHGYILFYESLG 368
>AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 |
chr3:3761758-3770290 REVERSE LENGTH=1114
Length = 1114
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 142/304 (46%), Gaps = 32/304 (10%)
Query: 70 AGVRNLGSTCFMSSILQCLTHTIKLFQGLRSYTHDCPGDAGEFCVFCALRSHMESCFTPA 129
G++N G+TC+M+S+LQ L H I F+ + DA + AL+S
Sbjct: 197 VGLKNQGATCYMNSLLQTLYH-IPYFRKAVYHMPTTENDAPTASIPLALQSLFYKLQYND 255
Query: 130 RSVVWPIFLADNLKQFSAGFKRGN-----QEDAQDFMNRAL-----NKLQGCFSEGHPNL 179
SV K+ + F Q D Q+ +NR L +K++G EG
Sbjct: 256 TSVA--------TKELTKSFGWDTYDSFMQHDVQE-LNRVLCEKLEDKMKGTVVEG---T 303
Query: 180 VGEIFGGRYVSQLRCSNCGHCSETFEAIIDLSLGIENIYTIQDALESYTKVEKVGGKSTC 239
+ ++F G +++ + C N + S E+ DL L ++ + + + Y +VE++ G +
Sbjct: 304 IQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLEGDNKY 363
Query: 240 NS-CKQVVSMEKQLLLTQTPSVAALHLKRFRGGGI--SVKKIENHVFFTLELDLQP---- 292
++ + +K +L P V L LKRF + ++ KI + F L+LDL
Sbjct: 364 HAEGHDLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDREDGR 423
Query: 293 YTFGAENHNVELKYDLYAVVVHTGNSPNSGHYFCFVR-SAPDKWHKLDDSEVTRVSGDEV 351
Y + +V Y L++V+VH+G + GHY+ F+R + D+W+K DD VT+
Sbjct: 424 YLSPDADKSVRNLYTLHSVLVHSGGV-HGGHYYAFIRPTLSDQWYKFDDERVTKEDVKRA 482
Query: 352 LCQQ 355
L +Q
Sbjct: 483 LEEQ 486
>AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 |
chr3:3761758-3770290 REVERSE LENGTH=1115
Length = 1115
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 142/304 (46%), Gaps = 32/304 (10%)
Query: 70 AGVRNLGSTCFMSSILQCLTHTIKLFQGLRSYTHDCPGDAGEFCVFCALRSHMESCFTPA 129
G++N G+TC+M+S+LQ L H I F+ + DA + AL+S
Sbjct: 198 VGLKNQGATCYMNSLLQTLYH-IPYFRKAVYHMPTTENDAPTASIPLALQSLFYKLQYND 256
Query: 130 RSVVWPIFLADNLKQFSAGFKRGN-----QEDAQDFMNRAL-----NKLQGCFSEGHPNL 179
SV K+ + F Q D Q+ +NR L +K++G EG
Sbjct: 257 TSVA--------TKELTKSFGWDTYDSFMQHDVQE-LNRVLCEKLEDKMKGTVVEG---T 304
Query: 180 VGEIFGGRYVSQLRCSNCGHCSETFEAIIDLSLGIENIYTIQDALESYTKVEKVGGKSTC 239
+ ++F G +++ + C N + S E+ DL L ++ + + + Y +VE++ G +
Sbjct: 305 IQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLEGDNKY 364
Query: 240 NS-CKQVVSMEKQLLLTQTPSVAALHLKRFRGGGI--SVKKIENHVFFTLELDLQP---- 292
++ + +K +L P V L LKRF + ++ KI + F L+LDL
Sbjct: 365 HAEGHDLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDREDGR 424
Query: 293 YTFGAENHNVELKYDLYAVVVHTGNSPNSGHYFCFVR-SAPDKWHKLDDSEVTRVSGDEV 351
Y + +V Y L++V+VH+G + GHY+ F+R + D+W+K DD VT+
Sbjct: 425 YLSPDADKSVRNLYTLHSVLVHSGGV-HGGHYYAFIRPTLSDQWYKFDDERVTKEDVKRA 483
Query: 352 LCQQ 355
L +Q
Sbjct: 484 LEEQ 487
>AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2019545-2027834 REVERSE LENGTH=1115
Length = 1115
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 141/304 (46%), Gaps = 32/304 (10%)
Query: 70 AGVRNLGSTCFMSSILQCLTHTIKLFQGLRSYTHDCPGDAGEFCVFCALRSHMESCFTPA 129
G++N G+TC+M+S+LQ L H I F+ + DA + AL+S
Sbjct: 198 VGLKNQGATCYMNSLLQTLYH-IPYFRKAVYHMPTTENDAPTASIPLALQSLFYKLQYND 256
Query: 130 RSVVWPIFLADNLKQFSAGFKRGN-----QEDAQDFMNRAL-----NKLQGCFSEGHPNL 179
SV K+ + F Q D Q+ +NR L +K++G EG
Sbjct: 257 TSVA--------TKELTKSFGWDTYDSFMQHDVQE-LNRVLCEKLEDKMKGTVVEG---T 304
Query: 180 VGEIFGGRYVSQLRCSNCGHCSETFEAIIDLSLGIENIYTIQDALESYTKVEKVGGKSTC 239
+ ++F G +++ + C N S E+ DL L ++ + + + Y +VE++ G +
Sbjct: 305 IQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLEGDNKY 364
Query: 240 NSCKQ-VVSMEKQLLLTQTPSVAALHLKRFRGGGI--SVKKIENHVFFTLELDLQ----P 292
++ + +K +L P V L LKRF + ++ KI + F LELDL
Sbjct: 365 HAEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDREDGK 424
Query: 293 YTFGAENHNVELKYDLYAVVVHTGNSPNSGHYFCFVR-SAPDKWHKLDDSEVTRVSGDEV 351
Y + +V Y L++V+VH+G + GHY+ F+R + D+W+K DD VT+
Sbjct: 425 YLSPDADRSVRNLYTLHSVLVHSGGV-HGGHYYAFIRPTLSDQWYKFDDERVTKEDLKRA 483
Query: 352 LCQQ 355
L +Q
Sbjct: 484 LEEQ 487
>AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2019545-2027834 REVERSE LENGTH=1116
Length = 1116
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 141/304 (46%), Gaps = 32/304 (10%)
Query: 70 AGVRNLGSTCFMSSILQCLTHTIKLFQGLRSYTHDCPGDAGEFCVFCALRSHMESCFTPA 129
G++N G+TC+M+S+LQ L H I F+ + DA + AL+S
Sbjct: 199 VGLKNQGATCYMNSLLQTLYH-IPYFRKAVYHMPTTENDAPTASIPLALQSLFYKLQYND 257
Query: 130 RSVVWPIFLADNLKQFSAGFKRGN-----QEDAQDFMNRAL-----NKLQGCFSEGHPNL 179
SV K+ + F Q D Q+ +NR L +K++G EG
Sbjct: 258 TSVA--------TKELTKSFGWDTYDSFMQHDVQE-LNRVLCEKLEDKMKGTVVEG---T 305
Query: 180 VGEIFGGRYVSQLRCSNCGHCSETFEAIIDLSLGIENIYTIQDALESYTKVEKVGGKSTC 239
+ ++F G +++ + C N S E+ DL L ++ + + + Y +VE++ G +
Sbjct: 306 IQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLEGDNKY 365
Query: 240 NSCKQ-VVSMEKQLLLTQTPSVAALHLKRFRGGGI--SVKKIENHVFFTLELDLQ----P 292
++ + +K +L P V L LKRF + ++ KI + F LELDL
Sbjct: 366 HAEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDREDGK 425
Query: 293 YTFGAENHNVELKYDLYAVVVHTGNSPNSGHYFCFVR-SAPDKWHKLDDSEVTRVSGDEV 351
Y + +V Y L++V+VH+G + GHY+ F+R + D+W+K DD VT+
Sbjct: 426 YLSPDADRSVRNLYTLHSVLVHSGGV-HGGHYYAFIRPTLSDQWYKFDDERVTKEDLKRA 484
Query: 352 LCQQ 355
L +Q
Sbjct: 485 LEEQ 488
>AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2020682-2027834 REVERSE LENGTH=985
Length = 985
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 141/304 (46%), Gaps = 32/304 (10%)
Query: 70 AGVRNLGSTCFMSSILQCLTHTIKLFQGLRSYTHDCPGDAGEFCVFCALRSHMESCFTPA 129
G++N G+TC+M+S+LQ L H I F+ + DA + AL+S
Sbjct: 199 VGLKNQGATCYMNSLLQTLYH-IPYFRKAVYHMPTTENDAPTASIPLALQSLFYKLQYND 257
Query: 130 RSVVWPIFLADNLKQFSAGFKRGN-----QEDAQDFMNRAL-----NKLQGCFSEGHPNL 179
SV K+ + F Q D Q+ +NR L +K++G EG
Sbjct: 258 TSVA--------TKELTKSFGWDTYDSFMQHDVQE-LNRVLCEKLEDKMKGTVVEG---T 305
Query: 180 VGEIFGGRYVSQLRCSNCGHCSETFEAIIDLSLGIENIYTIQDALESYTKVEKVGGKSTC 239
+ ++F G +++ + C N S E+ DL L ++ + + + Y +VE++ G +
Sbjct: 306 IQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLEGDNKY 365
Query: 240 NSCKQ-VVSMEKQLLLTQTPSVAALHLKRFRGGGI--SVKKIENHVFFTLELDLQ----P 292
++ + +K +L P V L LKRF + ++ KI + F LELDL
Sbjct: 366 HAEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDREDGK 425
Query: 293 YTFGAENHNVELKYDLYAVVVHTGNSPNSGHYFCFVR-SAPDKWHKLDDSEVTRVSGDEV 351
Y + +V Y L++V+VH+G + GHY+ F+R + D+W+K DD VT+
Sbjct: 426 YLSPDADRSVRNLYTLHSVLVHSGGV-HGGHYYAFIRPTLSDQWYKFDDERVTKEDLKRA 484
Query: 352 LCQQ 355
L +Q
Sbjct: 485 LEEQ 488
>AT2G22310.2 | Symbols: UBP4 | ubiquitin-specific protease 4 |
chr2:9476733-9478825 REVERSE LENGTH=379
Length = 379
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 144/362 (39%), Gaps = 73/362 (20%)
Query: 71 GVRNLGSTCFMSSILQ--------CLTHTIKLF-------QGLRSYTHDCPGDAGEFCVF 115
G N G+TC+ +S+LQ L L+ Q L Y ++ DA E +
Sbjct: 24 GFENFGNTCYCNSVLQDWVVDLRSVLHSMFALYFCAPFREQLLEHYANN-KADAEENLLT 82
Query: 116 CA--LRSHMESCFTPARSVVWPIFLADNLKQFSAGFKRGNQEDAQDFMNRALNKL----- 168
C L S + S V+ P LK+ + F+ +DA +F+N LN+L
Sbjct: 83 CLADLFSQISSQ-KKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNELVEILE 141
Query: 169 ----------------------------QGCFSEGHPNLVGEIFGGRYVSQLRCSNCGHC 200
G E V +IF G ++ RC C
Sbjct: 142 KETQATKADNETSSSPEKIANVLKAPLANGVHKEPIVTWVHKIFQGILTNETRCLRCETV 201
Query: 201 SETFEAIIDLSLGIENIYTIQDALESYTKVEKVGGKST--CNSCKQVVSMEKQLLLTQTP 258
+ E +DLSL IE +I L++++ E + + C+ C + +K++ + + P
Sbjct: 202 TARDETFLDLSLDIEQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPP 261
Query: 259 SVAALHLKRFRGGGI--SVKKIENHVFFTLELDLQPYTFGAENHNVELKYDLYAVVVHTG 316
+ +HLKRF+ KK+ V F LEL L + V+++Y L+AVVVH G
Sbjct: 262 HILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLS----NTVDEYVDIEYSLFAVVVHVG 317
Query: 317 NSPNSGHYFCFVRSAPDKWHKLDDSEVTRVSGDEVL------------CQQAYILFYARR 364
+ PN GHY V+S + W DD V + V YIL Y
Sbjct: 318 SGPNHGHYVSLVKSH-NHWLFFDDESVEIIEESAVQTFFGSSQEYSSNTDHGYILLYESL 376
Query: 365 GT 366
GT
Sbjct: 377 GT 378
>AT4G30890.3 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 151/375 (40%), Gaps = 77/375 (20%)
Query: 59 IPMSS--PVKS-VGAGVRNLGSTCFMSSILQCL---THTIKLFQGLRSYTHDCP-GDAGE 111
+P S PVK G+ N G+ CF+++ LQ L + ++L Q ++ D P D+
Sbjct: 183 VPTESVPPVKDFTPRGLINAGNLCFLNATLQALLSCSPFVQLLQKIQ--LQDIPKADSPT 240
Query: 112 FCVFCALRSHME-----------------SCFTPAR-SVVWPIFLADNLKQFSAGFKRGN 153
F S ++ F PA V F D L S R
Sbjct: 241 LAAFSEFISELDVPSSSSIRNNVTVVEAGRPFRPAMFEGVLRNFTPDVLNNMSG---RPR 297
Query: 154 QEDAQDFMNRALNKLQ------------------GCFSEGH------------------- 176
QEDAQ+F++ ++++ S +
Sbjct: 298 QEDAQEFLSFIMDQMHDELLKLKEQSPKVTASKSSVISSANDDGDEWETVGPKNKSAVTR 357
Query: 177 -----PNLVGEIFGGRYVSQLRCSNCGHCSETFEAIIDLSLGI--ENIYTIQDALESYTK 229
P+ + EIFGG+ S ++ S T + + L L I + + I+DAL ++
Sbjct: 358 TQSFVPSELSEIFGGQLKSVVKAKGT-KASATVQPYLLLHLDIHPDGVQGIEDALHLFSA 416
Query: 230 VEKVGG-KSTCNSCKQVVSMEKQLLLTQTPSVAALHLKRFRGGGISVKKIENHVFFTLEL 288
E + G +++ VVS K + + + + LHL RF G K+ V F LEL
Sbjct: 417 QEDLEGYRASVTGKTGVVSASKSIKIQKLSKIMILHLMRFSYGSQGSTKLRKGVKFPLEL 476
Query: 289 DLQPYTFGAENHNVELKYDLYAVVVHTGNSPNSGHYFCFVRSAPDKWHKLDDSEVTRVSG 348
+L + N L+Y+L A + H G P+ GHY R +W + DD+ VT +
Sbjct: 477 NLN-RSHLVSLSNESLRYELVATITHHGWDPSKGHYTTDARRKNGQWLRFDDASVTPIGT 535
Query: 349 DEVLCQQAYILFYAR 363
VL QAY+LFY +
Sbjct: 536 KLVLHDQAYVLFYKQ 550
>AT4G30890.2 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 151/375 (40%), Gaps = 77/375 (20%)
Query: 59 IPMSS--PVKS-VGAGVRNLGSTCFMSSILQCL---THTIKLFQGLRSYTHDCP-GDAGE 111
+P S PVK G+ N G+ CF+++ LQ L + ++L Q ++ D P D+
Sbjct: 183 VPTESVPPVKDFTPRGLINAGNLCFLNATLQALLSCSPFVQLLQKIQ--LQDIPKADSPT 240
Query: 112 FCVFCALRSHME-----------------SCFTPAR-SVVWPIFLADNLKQFSAGFKRGN 153
F S ++ F PA V F D L S R
Sbjct: 241 LAAFSEFISELDVPSSSSIRNNVTVVEAGRPFRPAMFEGVLRNFTPDVLNNMSG---RPR 297
Query: 154 QEDAQDFMNRALNKLQ------------------GCFSEGH------------------- 176
QEDAQ+F++ ++++ S +
Sbjct: 298 QEDAQEFLSFIMDQMHDELLKLKEQSPKVTASKSSVISSANDDGDEWETVGPKNKSAVTR 357
Query: 177 -----PNLVGEIFGGRYVSQLRCSNCGHCSETFEAIIDLSLGI--ENIYTIQDALESYTK 229
P+ + EIFGG+ S ++ S T + + L L I + + I+DAL ++
Sbjct: 358 TQSFVPSELSEIFGGQLKSVVKAKGT-KASATVQPYLLLHLDIHPDGVQGIEDALHLFSA 416
Query: 230 VEKVGG-KSTCNSCKQVVSMEKQLLLTQTPSVAALHLKRFRGGGISVKKIENHVFFTLEL 288
E + G +++ VVS K + + + + LHL RF G K+ V F LEL
Sbjct: 417 QEDLEGYRASVTGKTGVVSASKSIKIQKLSKIMILHLMRFSYGSQGSTKLRKGVKFPLEL 476
Query: 289 DLQPYTFGAENHNVELKYDLYAVVVHTGNSPNSGHYFCFVRSAPDKWHKLDDSEVTRVSG 348
+L + N L+Y+L A + H G P+ GHY R +W + DD+ VT +
Sbjct: 477 NLN-RSHLVSLSNESLRYELVATITHHGWDPSKGHYTTDARRKNGQWLRFDDASVTPIGT 535
Query: 349 DEVLCQQAYILFYAR 363
VL QAY+LFY +
Sbjct: 536 KLVLHDQAYVLFYKQ 550
>AT4G30890.1 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 151/375 (40%), Gaps = 77/375 (20%)
Query: 59 IPMSS--PVKS-VGAGVRNLGSTCFMSSILQCL---THTIKLFQGLRSYTHDCP-GDAGE 111
+P S PVK G+ N G+ CF+++ LQ L + ++L Q ++ D P D+
Sbjct: 183 VPTESVPPVKDFTPRGLINAGNLCFLNATLQALLSCSPFVQLLQKIQ--LQDIPKADSPT 240
Query: 112 FCVFCALRSHME-----------------SCFTPAR-SVVWPIFLADNLKQFSAGFKRGN 153
F S ++ F PA V F D L S R
Sbjct: 241 LAAFSEFISELDVPSSSSIRNNVTVVEAGRPFRPAMFEGVLRNFTPDVLNNMSG---RPR 297
Query: 154 QEDAQDFMNRALNKLQ------------------GCFSEGH------------------- 176
QEDAQ+F++ ++++ S +
Sbjct: 298 QEDAQEFLSFIMDQMHDELLKLKEQSPKVTASKSSVISSANDDGDEWETVGPKNKSAVTR 357
Query: 177 -----PNLVGEIFGGRYVSQLRCSNCGHCSETFEAIIDLSLGI--ENIYTIQDALESYTK 229
P+ + EIFGG+ S ++ S T + + L L I + + I+DAL ++
Sbjct: 358 TQSFVPSELSEIFGGQLKSVVKAKGT-KASATVQPYLLLHLDIHPDGVQGIEDALHLFSA 416
Query: 230 VEKVGG-KSTCNSCKQVVSMEKQLLLTQTPSVAALHLKRFRGGGISVKKIENHVFFTLEL 288
E + G +++ VVS K + + + + LHL RF G K+ V F LEL
Sbjct: 417 QEDLEGYRASVTGKTGVVSASKSIKIQKLSKIMILHLMRFSYGSQGSTKLRKGVKFPLEL 476
Query: 289 DLQPYTFGAENHNVELKYDLYAVVVHTGNSPNSGHYFCFVRSAPDKWHKLDDSEVTRVSG 348
+L + N L+Y+L A + H G P+ GHY R +W + DD+ VT +
Sbjct: 477 NLN-RSHLVSLSNESLRYELVATITHHGWDPSKGHYTTDARRKNGQWLRFDDASVTPIGT 535
Query: 349 DEVLCQQAYILFYAR 363
VL QAY+LFY +
Sbjct: 536 KLVLHDQAYVLFYKQ 550
>AT5G10790.1 | Symbols: UBP22 | ubiquitin-specific protease 22 |
chr5:3410638-3412559 FORWARD LENGTH=557
Length = 557
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 155/355 (43%), Gaps = 64/355 (18%)
Query: 71 GVRNLGSTCFMSSILQCLTHTIKLFQGLRSYTHD---CPGDA-GEFCVFCALRSHMESCF 126
G+ NLGSTCFM+++LQ L H L S H+ CP G C+ C L + F
Sbjct: 178 GLNNLGSTCFMNAVLQALVHAPPLRNFWLSGQHNRDLCPRRTMGLLCLPCDLDVIFSAMF 237
Query: 127 TPARSVVWPIFLADNLKQFSAGFKRGNQEDAQDFMNRALNKLQ------GCFSEGHPN-- 178
+ R+ P L + Q S Q+D+ +F L+++ C + +
Sbjct: 238 SGDRTPYSPAHLLYSWWQHSTNLATYEQQDSHEFFISLLDRIHENEGKSKCLYQDNEECQ 297
Query: 179 -LVGEIFGGRYVSQLRCSNCGHCSETFEAIIDLSLGIENIY------------------- 218
+ + F G S + C+ CG S T++ ID+SL ++++
Sbjct: 298 CITHKAFSGLLRSDVTCTTCGSTSTTYDPFIDISLTLDSMNGFSPADCRKNRYSGGPSVN 357
Query: 219 ----TIQDALESYTKVEKVG--GKSTCNSCKQVVSMEKQLLLTQTPSVAALHLKRFRGGG 272
T+ L+ +T+ EK+G K C SC + KQ+ + + P + LH+KRF
Sbjct: 358 AIMPTLSGCLDFFTRSEKLGPDQKLNCQSCGEKRESSKQMSIRRLPLLLCLHVKRFEHSL 417
Query: 273 I--SVKKIENHVFFTLELDLQPY---------------TFGAENH-------NVELKYDL 308
+ +KI++++ + L++ PY F E + ++++
Sbjct: 418 TRKTSRKIDSYLQYPFRLNMSPYLSSSIIGKRFGNRIFAFDGEGEYDSSSSSSPSAEFEI 477
Query: 309 YAVVVHTGNSPNSGHYFCFVRSAPDKWHKLDDSEVTRVSGDEVLCQQAYILFYAR 363
+AVV H G SGHY ++R W++ DD+ + V + V + Y+LFYA+
Sbjct: 478 FAVVTHKG-MLESGHYVTYLR-LKGLWYRCDDAWINEVEEEVVRGCECYMLFYAQ 530
>AT3G49600.1 | Symbols: UBP26, SUP32, ATUBP26 | ubiquitin-specific
protease 26 | chr3:18380942-18386662 REVERSE LENGTH=1067
Length = 1067
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 129/293 (44%), Gaps = 23/293 (7%)
Query: 66 KSVGAGVRNLGSTCFMSSILQCLTHTIKLFQGLRSYT----HDCPGDAGEFCVFCALRSH 121
+S AG+ NLG+TC+ +SILQCL +G+ S P +F L +
Sbjct: 102 ESTPAGLTNLGATCYANSILQCLYMNTAFREGVFSVEVHVLKQNPVLDQIARLFAQLHAS 161
Query: 122 MESCFTPARSVVWPIFLADNLKQFSAGFKRGNQEDAQDFMNRALNKLQGCFSEGHPNLVG 181
+S F + + V + L + ++Q + F + + + K + +V
Sbjct: 162 QKS-FVDSDAFVKTLELDNGVQQDTHEFLTLLLSLLERCLLHSGVKAK--------TIVQ 212
Query: 182 EIFGGRYVSQLRCSNCGHCSETFEAIID---LSLGIENIYTIQDALESYTKVEKVGGKST 238
++F G CS CG SE + D L L ++ + ++ +L Y +E++ G +
Sbjct: 213 DLFSGSVSHVTTCSKCGRDSEASSKMEDFYALELNVKGLKSLDASLNDYLSLEQLNGDNQ 272
Query: 239 --CNSCKQVVSMEKQLLLTQTPSVAALHLKR--FRGGGISVKKIENHVFFTLELDLQPYT 294
C SC V + + L P V LKR F + KKI + F LD+
Sbjct: 273 YFCGSCNARVDATRCIKLRTLPPVITFQLKRCIFLPKTTAKKKITSSFSFPQVLDMGSRL 332
Query: 295 FGAENHNVELKYDLYAVVVHTGNSPNSGHYFCFVRSAPDK-WHKLDDSEVTRV 346
AE+ +L YDL AV++H G++ NSGHY ++ W + DD V+ +
Sbjct: 333 --AESSQNKLTYDLSAVLIHKGSAVNSGHYVAHIKDEKTGLWWEFDDEHVSEL 383
>AT5G22030.1 | Symbols: UBP8 | ubiquitin-specific protease 8 |
chr5:7290155-7296344 REVERSE LENGTH=913
Length = 913
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 73/143 (51%), Gaps = 5/143 (3%)
Query: 224 LESYTKVEKVGGKST--CNSCKQVVSMEKQLLLTQTPSVAALHLKRFRGGGISVKKIENH 281
LE++ E +G C CK+ K+L L + P + +HLKRF K+E +
Sbjct: 770 LEAFLTEEPLGPDDMWYCPGCKEHRQAIKKLDLWRLPEILVIHLKRFSYSRFMKNKLEAY 829
Query: 282 VFFTLE-LDLQPYTFGAENHNVELKYDLYAVVVHTGNSPNSGHYFCFVRSAPDKWHKLDD 340
V F L+ LDL Y +N +Y LYA+ H G S GHY +V D+W+ DD
Sbjct: 830 VDFPLDNLDLSSY-ISYKNGQTTYRYMLYAISNHYG-SMGGGHYTAYVHHGGDRWYDFDD 887
Query: 341 SEVTRVSGDEVLCQQAYILFYAR 363
S V ++S +++ AY+LFY R
Sbjct: 888 SHVHQISQEKIKTSAAYVLFYKR 910
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 79/181 (43%), Gaps = 38/181 (20%)
Query: 70 AGVRNLGSTCFMSSILQCLTHTIKL---FQG--LRSYTHDCP-GDAGEFCVFCALRSHME 123
G++NLG+TCFM+S LQCL HT KL F G + D P G GE + A +
Sbjct: 321 TGLQNLGNTCFMNSSLQCLAHTPKLVDFFLGEYSKEINLDNPLGMKGEIAL--AFGDLLR 378
Query: 124 SCFTPARSVVWPIFLADNLKQFSAGFKRGNQEDAQDF-----------MNRALNK--LQG 170
S + P S V P L +F+ F NQ D+Q+ +NR NK ++
Sbjct: 379 SLWAPGASTVAPRTFKAKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKNKPYVEA 438
Query: 171 CFSEGHPN-----------------LVGEIFGGRYVSQLRCSNCGHCSETFEAIIDLSLG 213
+G P+ ++ ++ G+Y S L C C S F+ + LSL
Sbjct: 439 KDGDGRPDAEVADEYWRNHVARNDSIIVDVCQGQYKSTLVCPICKKVSVMFDPFMYLSLP 498
Query: 214 I 214
+
Sbjct: 499 L 499
>AT5G22030.2 | Symbols: UBP8 | ubiquitin-specific protease 8 |
chr5:7290155-7296344 REVERSE LENGTH=913
Length = 913
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 73/143 (51%), Gaps = 5/143 (3%)
Query: 224 LESYTKVEKVGGKST--CNSCKQVVSMEKQLLLTQTPSVAALHLKRFRGGGISVKKIENH 281
LE++ E +G C CK+ K+L L + P + +HLKRF K+E +
Sbjct: 770 LEAFLTEEPLGPDDMWYCPGCKEHRQAIKKLDLWRLPEILVIHLKRFSYSRFMKNKLEAY 829
Query: 282 VFFTLE-LDLQPYTFGAENHNVELKYDLYAVVVHTGNSPNSGHYFCFVRSAPDKWHKLDD 340
V F L+ LDL Y +N +Y LYA+ H G S GHY +V D+W+ DD
Sbjct: 830 VDFPLDNLDLSSY-ISYKNGQTTYRYMLYAISNHYG-SMGGGHYTAYVHHGGDRWYDFDD 887
Query: 341 SEVTRVSGDEVLCQQAYILFYAR 363
S V ++S +++ AY+LFY R
Sbjct: 888 SHVHQISQEKIKTSAAYVLFYKR 910
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 79/181 (43%), Gaps = 38/181 (20%)
Query: 70 AGVRNLGSTCFMSSILQCLTHTIKL---FQG--LRSYTHDCP-GDAGEFCVFCALRSHME 123
G++NLG+TCFM+S LQCL HT KL F G + D P G GE + A +
Sbjct: 321 TGLQNLGNTCFMNSSLQCLAHTPKLVDFFLGEYSKEINLDNPLGMKGEIAL--AFGDLLR 378
Query: 124 SCFTPARSVVWPIFLADNLKQFSAGFKRGNQEDAQDF-----------MNRALNK--LQG 170
S + P S V P L +F+ F NQ D+Q+ +NR NK ++
Sbjct: 379 SLWAPGASTVAPRTFKAKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKNKPYVEA 438
Query: 171 CFSEGHPN-----------------LVGEIFGGRYVSQLRCSNCGHCSETFEAIIDLSLG 213
+G P+ ++ ++ G+Y S L C C S F+ + LSL
Sbjct: 439 KDGDGRPDAEVADEYWRNHVARNDSIIVDVCQGQYKSTLVCPICKKVSVMFDPFMYLSLP 498
Query: 214 I 214
+
Sbjct: 499 L 499
>AT2G40930.1 | Symbols: UBP5, ATUBP5, PDE323 | ubiquitin-specific
protease 5 | chr2:17076714-17082192 REVERSE LENGTH=924
Length = 924
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 65/129 (50%), Gaps = 4/129 (3%)
Query: 239 CNSCKQVVSMEKQLLLTQTPSVAALHLKRFRGGGISVKKIENHVFFTL-ELDLQPYTFGA 297
C C + K+L L + P V +HLKRF K+E V F + +LDL Y
Sbjct: 791 CPQCNERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFPIHDLDLTKYVANK 850
Query: 298 ENHNVELKYDLYAVVVHTGNSPNSGHYFCFVRSAPD-KWHKLDDSEVTRVSGDEVLCQQA 356
+L Y+LYA+ H G SGHY ++ D +W+ DDS ++ ++ D+V A
Sbjct: 851 NLSQPQL-YELYALTNHYGGM-GSGHYTAHIKLLDDSRWYNFDDSHISHINEDDVKSGAA 908
Query: 357 YILFYARRG 365
Y+LFY R+
Sbjct: 909 YVLFYRRKS 917
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 38/182 (20%)
Query: 70 AGVRNLGSTCFMSSILQCLTHTIKLFQGLRSYTH------DCPGDAGEFCVFCALRSHME 123
G+ NLG+TCFM+S +QCL HT + + H + G GE + A +
Sbjct: 317 TGLLNLGNTCFMNSAIQCLVHTPEFASYFQEDYHQEINWQNPLGMVGELAL--AFGDLLR 374
Query: 124 SCFTPARSVVWPIFLADNLKQFSAGFKRGNQEDAQDF-----------MNRALNK--LQG 170
+ P R+ + P L +F+ F NQ D+Q+ +NR +K +
Sbjct: 375 KLWAPGRTPIAPRPFKAKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKHKPYINS 434
Query: 171 CFSEGHPN-----------------LVGEIFGGRYVSQLRCSNCGHCSETFEAIIDLSLG 213
++G P+ ++ ++ G+Y S L C C S TF+ + LSL
Sbjct: 435 RDADGRPDEEVADEFWKNHIARNDSIIVDVCQGQYKSTLVCPICNKVSVTFDPFMYLSLP 494
Query: 214 IE 215
++
Sbjct: 495 LQ 496
>AT1G32850.1 | Symbols: UBP11 | ubiquitin-specific protease 11 |
chr1:11902629-11906900 FORWARD LENGTH=892
Length = 892
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 83/181 (45%), Gaps = 38/181 (20%)
Query: 70 AGVRNLGSTCFMSSILQCLTHTIKLFQG-LRSYTHDCP-----GDAGEFCVFCALRSHME 123
G++NLG+TCFM+S LQCL HT + + L+ Y D G GE + A +
Sbjct: 301 GGLQNLGNTCFMNSTLQCLAHTPPIVEYFLQDYRSDINAKNPLGMRGELAI--AFGELLR 358
Query: 124 SCFTPARSVVWPIFLADNLKQFSAGFKRGNQEDAQ-------DFMNRALNK------LQG 170
++ ++ V P L +F+ F NQ D+Q D ++ LNK ++
Sbjct: 359 KLWSSGQNTVAPRAFKTKLARFAPQFSGYNQHDSQEMLAFLLDGLHEDLNKVKRKPYIEA 418
Query: 171 CFSEGHPN-----------------LVGEIFGGRYVSQLRCSNCGHCSETFEAIIDLSLG 213
S+G P+ ++ ++F G+Y S L C +CG S TF+ + LSL
Sbjct: 419 KDSDGRPDDEVAEEKWKYHKARNDSVIVDVFQGQYKSTLVCPDCGKISITFDPFMYLSLP 478
Query: 214 I 214
+
Sbjct: 479 L 479
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 7/144 (4%)
Query: 224 LESYTKVEKVGGKST--CNSCKQVVSMEKQLLLTQTPSVAALHLKRFRGGGISVKKIENH 281
LE++ E +G C CK+ K+L L + P + HLKRF KI+
Sbjct: 739 LEAFLAEEPLGPDDMWYCPGCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYFKNKIDTL 798
Query: 282 VFFTL-ELDLQPYTFGAENHNVELKYDLYAVVVHTGNSPNSGHYFCFVRSAPD-KWHKLD 339
V F + +LDL Y + + Y+LYA+ H G GHY + + + KW+ D
Sbjct: 799 VNFHIHDLDLSKYVKNEDGQSY--LYELYAISNHYGGL-GGGHYTAYAKLMDETKWYNFD 855
Query: 340 DSEVTRVSGDEVLCQQAYILFYAR 363
DS V+ V+ E+ AY+LFY R
Sbjct: 856 DSRVSAVNESEIKTSAAYVLFYQR 879
>AT4G10570.1 | Symbols: UBP9 | ubiquitin-specific protease 9 |
chr4:6523657-6528058 REVERSE LENGTH=923
Length = 923
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 72/145 (49%), Gaps = 9/145 (6%)
Query: 224 LESYTKVEKVGGKST--CNSCKQVVSMEKQLLLTQTPSVAALHLKRFRGGGISVKKIENH 281
LE++ E +G C SCK+ K+L L + P + HLKRF KI+
Sbjct: 754 LEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYLKNKIDTF 813
Query: 282 VFFTL-ELDLQPYTFGAENHNVE-LKYDLYAVVVHTGNSPNSGHYFCFVRSAPD-KWHKL 338
V F + +LDL Y +N N + Y+LYAV H G GHY + + D KW+
Sbjct: 814 VNFPVHDLDLSKY---VKNKNGQSYLYELYAVSNHYGGL-GGGHYTAYAKLIDDNKWYHF 869
Query: 339 DDSEVTRVSGDEVLCQQAYILFYAR 363
DDS V+ V+ E+ AY+LFY R
Sbjct: 870 DDSHVSSVNESEIRNSAAYVLFYRR 894
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 38/186 (20%)
Query: 70 AGVRNLGSTCFMSSILQCLTHTIKLFQG-LRSYTHDCPGD-----AGEFCVFCALRSHME 123
AG+ NLG+TCFM+S LQCL HT + + L+ Y+ D D GE + A ++
Sbjct: 304 AGLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDNPLGMCGELAI--AFGDLLK 361
Query: 124 SCFTPARSVVWPIFLADNLKQFSAGFKRGNQEDAQDFMNRALNKLQGCF----------- 172
++ R+ V P L +F+ F NQ D+Q+ + L+ L
Sbjct: 362 KLWSSGRNAVAPRAFKTKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNKVKRKPYIEL 421
Query: 173 --SEGHPN-----------------LVGEIFGGRYVSQLRCSNCGHCSETFEAIIDLSLG 213
S+ P+ ++ ++ G+Y S L C CG S TF+ + LS+
Sbjct: 422 KDSDSRPDDEVAEELWNYHKARNDSVIVDVCQGQYKSTLVCPVCGKISITFDPFMYLSVP 481
Query: 214 IENIYT 219
+ + T
Sbjct: 482 LPSTLT 487
>AT2G32780.1 | Symbols: UBP1, ATUBP1 | ubiquitin-specific protease 1 |
chr2:13898431-13901870 REVERSE LENGTH=1083
Length = 1083
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 89/198 (44%), Gaps = 36/198 (18%)
Query: 199 HCSETFEAIIDLSLGIENIYTIQDALESYTKVEKVGGKSTC------NSCKQ-----VVS 247
+C E AI D +G EN T Q + S T+ +GG++ N C+ V S
Sbjct: 888 NCKEEESAIDDGFVGEEN--TKQAPITSVTETPLLGGETISSQPASDNECENWEDLAVDS 945
Query: 248 ME--------KQLLLTQTPSVAALHLKRF-RGGGISVKKIENHVFFTLELDLQPYTFGAE 298
E K++L+ + P V +HLKRF + V K+ HV F +DL Y
Sbjct: 946 EEVIVKRDARKKVLINKAPPVLTIHLKRFSQDARGRVSKLSGHVDFQEFIDLSKYMDTRC 1005
Query: 299 NHNVELKYDLYAVVVHTGNSPNSGHYFCFVR-----------SAPDK--WHKLDDSEVTR 345
+ E Y L +V H G + + GHY ++R P+ W+ DS+V
Sbjct: 1006 SEEDEPVYRLAGLVEHLG-AMSRGHYVSYIRGGHKERRDSDTKEPNSSIWYHASDSQVRP 1064
Query: 346 VSGDEVLCQQAYILFYAR 363
S +EVL +AYILFY R
Sbjct: 1065 ASLEEVLRSEAYILFYER 1082
>AT4G10590.1 | Symbols: UBP10 | ubiquitin-specific protease 10 |
chr4:6538919-6543272 REVERSE LENGTH=910
Length = 910
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 70/144 (48%), Gaps = 7/144 (4%)
Query: 224 LESYTKVEKVGGKST--CNSCKQVVSMEKQLLLTQTPSVAALHLKRFRGGGISVKKIENH 281
LE++ E +G C SCK+ K+L L + P + HLKRF KI+
Sbjct: 753 LEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYLKNKIDTF 812
Query: 282 VFFTL-ELDLQPYTFGAENHNVELKYDLYAVVVHTGNSPNSGHYFCFVRSAPD-KWHKLD 339
V F + +LDL Y + + Y+LYAV H G GHY + + D +W+ D
Sbjct: 813 VNFPVHDLDLSKYVKNKNDQSY--LYELYAVSNHYGGL-GGGHYTAYAKLIDDNEWYHFD 869
Query: 340 DSEVTRVSGDEVLCQQAYILFYAR 363
DS V+ V+ E+ AY+LFY R
Sbjct: 870 DSHVSSVNESEIKNSAAYVLFYRR 893
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 38/186 (20%)
Query: 70 AGVRNLGSTCFMSSILQCLTHTIKLFQG-LRSYTHDCPGD-----AGEFCVFCALRSHME 123
AG+ NLG+TCFM+S LQCL HT + + L+ Y+ D D GE + A ++
Sbjct: 303 AGLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDNPLGMCGELAI--AFGDLLK 360
Query: 124 SCFTPARSVVWPIFLADNLKQFSAGFKRGNQEDAQDFMNRALNKLQGCF----------- 172
++ R+ V P L +F+ F NQ D+Q+ + L+ L
Sbjct: 361 KLWSSGRNSVAPRAFKTKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNKVKRKPYIEL 420
Query: 173 --SEGHPN-----------------LVGEIFGGRYVSQLRCSNCGHCSETFEAIIDLSLG 213
S+ P+ ++ ++ G+Y S L C CG S TF+ + LS+
Sbjct: 421 KDSDSRPDDEVAEELWNYHKARNDSVIVDVCQGQYKSTLVCPACGKISITFDPFMYLSVP 480
Query: 214 IENIYT 219
+ + T
Sbjct: 481 LPSTLT 486
>AT4G10590.2 | Symbols: UBP10 | ubiquitin-specific protease 10 |
chr4:6538919-6543272 REVERSE LENGTH=910
Length = 910
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 70/144 (48%), Gaps = 7/144 (4%)
Query: 224 LESYTKVEKVGGKST--CNSCKQVVSMEKQLLLTQTPSVAALHLKRFRGGGISVKKIENH 281
LE++ E +G C SCK+ K+L L + P + HLKRF KI+
Sbjct: 753 LEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYLKNKIDTF 812
Query: 282 VFFTL-ELDLQPYTFGAENHNVELKYDLYAVVVHTGNSPNSGHYFCFVRSAPD-KWHKLD 339
V F + +LDL Y + + Y+LYAV H G GHY + + D +W+ D
Sbjct: 813 VNFPVHDLDLSKYVKNKNDQSY--LYELYAVSNHYGGL-GGGHYTAYAKLIDDNEWYHFD 869
Query: 340 DSEVTRVSGDEVLCQQAYILFYAR 363
DS V+ V+ E+ AY+LFY R
Sbjct: 870 DSHVSSVNESEIKNSAAYVLFYRR 893
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 38/186 (20%)
Query: 70 AGVRNLGSTCFMSSILQCLTHTIKLFQG-LRSYTHDCPGD-----AGEFCVFCALRSHME 123
AG+ NLG+TCFM+S LQCL HT + + L+ Y+ D D GE + A ++
Sbjct: 303 AGLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDNPLGMCGELAI--AFGDLLK 360
Query: 124 SCFTPARSVVWPIFLADNLKQFSAGFKRGNQEDAQDFMNRALNKLQGCF----------- 172
++ R+ V P L +F+ F NQ D+Q+ + L+ L
Sbjct: 361 KLWSSGRNSVAPRAFKTKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNKVKRKPYIEL 420
Query: 173 --SEGHPN-----------------LVGEIFGGRYVSQLRCSNCGHCSETFEAIIDLSLG 213
S+ P+ ++ ++ G+Y S L C CG S TF+ + LS+
Sbjct: 421 KDSDSRPDDEVAEELWNYHKARNDSVIVDVCQGQYKSTLVCPACGKISITFDPFMYLSVP 480
Query: 214 IENIYT 219
+ + T
Sbjct: 481 LPSTLT 486
>AT1G04860.1 | Symbols: UBP2, ATUBP2 | ubiquitin-specific protease 2
| chr1:1369306-1372290 REVERSE LENGTH=961
Length = 961
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 21/157 (13%)
Query: 224 LESYTKVEKVGGKSTCNSCKQVVSME----KQLLLTQTPSVAALHLKRF----RGGGISV 275
+ S + E G + ++V++++ K++L+ + P V +HLKRF RG +
Sbjct: 804 IHSADESESKGTQDEDEDSEKVITVKRDATKKVLINKAPPVLTIHLKRFSQDLRG---RL 860
Query: 276 KKIENHVFFTLELDLQPYTFGAENHNVELKYDLYAVVVHTGNSPNSGHYFCFVR------ 329
K+ HV F +DL+ Y + Y L +V H+G + GHY +VR
Sbjct: 861 SKLNGHVAFKEVIDLRQYMDSRCSGEDPPVYRLAGLVEHSG-TMRGGHYVAYVRGGQRVK 919
Query: 330 ---SAPDKWHKLDDSEVTRVSGDEVLCQQAYILFYAR 363
S+ W+ + D+ V +VS ++VL +AYILFY R
Sbjct: 920 ETDSSSTAWYNVSDAYVRQVSLEKVLHSEAYILFYER 956
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 67/160 (41%), Gaps = 26/160 (16%)
Query: 71 GVRNLGSTCFMSSILQCLTHTIKLFQGLRSYTHDCPGDAGEFCVFCALRSHMESCFTPAR 130
G+ NLG+TCF +SI+Q L LR + G V L S + FT +
Sbjct: 232 GLVNLGNTCFFNSIMQNLLS----LDRLRDHFLKENGSG----VGGPLASSLRKLFTETK 283
Query: 131 ------SVVWPIFLADNLKQFSAGFKRGNQEDAQDFM----------NRALNKLQGCFS- 173
SV+ P + + F+ +Q D+ + + AL K +G
Sbjct: 284 PEAGLKSVINPRAFFGSFCSKAPQFRGYDQHDSHELLRCLLDSLSTEESALRKKRGVSDN 343
Query: 174 -EGHPNLVGEIFGGRYVSQLRCSNCGHCSETFEAIIDLSL 212
E L+ +FGG S + C CGH S+ +E +DLSL
Sbjct: 344 DEKSTTLIESVFGGETSSIVSCMECGHSSKVYEPFLDLSL 383
>AT4G39370.1 | Symbols: UBP27 | ubiquitin-specific protease 27 |
chr4:18306392-18308625 FORWARD LENGTH=494
Length = 494
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 48/182 (26%)
Query: 228 TKVEKV---GGKSTCNSCKQVVSME------------KQLLLTQTPSVAALHLKRFRGGG 272
T++EK+ GG+ C+ CK + ++ KQL++ + P + + ++R
Sbjct: 314 TEIEKLRSCGGEDQCD-CKTSLHLQRMPWSNSYSHILKQLIIARFPKLLCIQVQRASFNM 372
Query: 273 ISVKKIENHVFFTLELDLQPYTFGAENHNVELK------------------YDLYAVVVH 314
K+ H+ F L L+L +T + N+E + Y L VV H
Sbjct: 373 FEEFKLSGHIAFPLVLNLSLFTPSSIGVNIEERIEMSSEYQKPEASKNHGMYRLVTVVEH 432
Query: 315 TGNSPNSGHYFCF--VRSAPD-----------KWHKLDDSEVTRVSGDEVLCQQAYILFY 361
G + SGHY + VR W + DSEV RVS +VL +A +LFY
Sbjct: 433 FGRT-GSGHYTVYRSVRVFSQEEEEEDCDEDLSWFSISDSEVCRVSESDVLGAEASLLFY 491
Query: 362 AR 363
R
Sbjct: 492 ER 493