Miyakogusa Predicted Gene

Lj6g3v2085690.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2085690.1 tr|B9H210|B9H210_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_555484 PE=4
SV=1,56.99,8e-19,seg,NULL; DUF3774,Protein of unknown function
wound-induced,CUFF.60657.1
         (90 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G05070.1 | Symbols:  | Wound-responsive family protein | chr4...    49   5e-07

>AT4G05070.1 | Symbols:  | Wound-responsive family protein |
          chr4:2593786-2594049 REVERSE LENGTH=87
          Length = 87

 Score = 49.3 bits (116), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 6/88 (6%)

Query: 6  MSRVFYQTGVKMLKD---TGSKCGDSTMKS-LKDXXXXXXXXXXXXXKQTWRFLSFFDSP 61
          M+RV  Q   K++K+   TG   GD+T++S +K+                 R     +S 
Sbjct: 1  MNRVISQFSGKLMKEKSVTGVSGGDTTLRSAVKESVSSPQSASSS--SSVRRLKGDLESS 58

Query: 62 AFKAPNTDKAKQAEESLRLIMFLSCWGP 89
           F A  +++ +QAEESLR +MFLSCWG 
Sbjct: 59 RFGAAASERLRQAEESLRTVMFLSCWGS 86