Miyakogusa Predicted Gene

Lj6g3v2083610.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2083610.1 Non Chatacterized Hit- tr|G7I3G5|G7I3G5_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,84.21,2e-19,Pcc1,EKC/KEOPS complex, subunit
Pcc1,CUFF.60650.1
         (95 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G53045.1 | Symbols:  | unknown protein; Has 122 Blast hits to...   129   3e-31

>AT5G53045.1 | Symbols:  | unknown protein; Has 122 Blast hits to
          122 proteins in 57 species: Archae - 0; Bacteria - 0;
          Metazoa - 46; Fungi - 30; Plants - 41; Viruses - 0;
          Other Eukaryotes - 5 (source: NCBI BLink). |
          chr5:21508603-21509538 REVERSE LENGTH=96
          Length = 96

 Score =  129 bits (325), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 61/80 (76%), Positives = 70/80 (87%)

Query: 11 WDFSCGLEVDFGSEENASIAYAALAVDKELQPDKVKRLMTVSDGKLSVRFEATEARFLRA 70
          WDFSC L+V F SEE+A IAY +LAVDKELQPDKV+R+M+VS+ KLSV FEA EAR LRA
Sbjct: 15 WDFSCNLDVSFESEEHALIAYTSLAVDKELQPDKVRRVMSVSNNKLSVHFEAIEARLLRA 74

Query: 71 SFSAFVDVLILATKTIEEFG 90
          SFSAFVDVL LAT+TI+EFG
Sbjct: 75 SFSAFVDVLTLATRTIQEFG 94