Miyakogusa Predicted Gene

Lj6g3v2080320.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2080320.1 tr|Q7G282|Q7G282_ORYSJ Expressed protein OS=Oryza
sativa subsp. japonica GN=LOC_Os10g36480 PE=2
SV=1,35.56,1e-17,seg,NULL; DUF1352,Protein of unknown function
DUF1352,CUFF.60637.1
         (180 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G51510.1 | Symbols:  | unknown protein; CONTAINS InterPro DOM...    87   5e-18

>AT5G51510.1 | Symbols:  | unknown protein; CONTAINS InterPro
           DOMAIN/s: Protein of unknown function DUF1352
           (InterPro:IPR009787); Has 30201 Blast hits to 17322
           proteins in 780 species: Archae - 12; Bacteria - 1396;
           Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses -
           0; Other Eukaryotes - 2996 (source: NCBI BLink). |
           chr5:20921512-20922818 FORWARD LENGTH=170
          Length = 170

 Score = 87.0 bits (214), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 83/180 (46%), Gaps = 10/180 (5%)

Query: 1   MQHRNSSLGRPSGTDGSDYSYRMVVDSRYQLVAKGKKRLSLLFIIEALVLLIGVVFAFLP 60
           MQ R  + GRPSGTDGSD+SYRMVVDSRY  V K K RL  L  ++A + +IG+  AFL 
Sbjct: 1   MQQRKPTAGRPSGTDGSDFSYRMVVDSRYTKVTKEKARLRPLIFVQAAIYVIGLSCAFLT 60

Query: 61  GREQHIPNTAXXXXXXXXXXXXXXADIXXXXXXXXXXXFYAIASSIATLQLIVSLAMWHS 120
             ++   NT                ++            Y  AS+I  + L V  A+   
Sbjct: 61  TTKKDEKNTLAIAAAVAGLVCSLIGELGCRRSRVNLLRLYTAASTI-VMVLSVFCAVRSR 119

Query: 121 LPKAIWDFGFSETRRFDATGFTGLQAGXXXXXXTFSLFKIWTIKAVLSLIFNMSPPKKSS 180
           L     +     T + +  GF   Q G        ++ +I  I    SL+ NMSPP K++
Sbjct: 120 LTMEERN-SSGTTAKLELAGFICAQLG--------AVVQILAIIVTGSLVNNMSPPTKAA 170