Miyakogusa Predicted Gene

Lj6g3v2078140.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2078140.2 CUFF.60627.2
         (299 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G61250.1 | Symbols: SC3 | secretory carrier 3 | chr1:22586035...   352   1e-97
AT1G11180.1 | Symbols:  | Secretory carrier membrane protein (SC...   344   5e-95
AT1G11180.2 | Symbols:  | Secretory carrier membrane protein (SC...   339   2e-93
AT2G20840.1 | Symbols:  | Secretory carrier membrane protein (SC...   330   6e-91
AT1G61250.2 | Symbols: SC3 | secretory carrier 3 | chr1:22586035...   323   1e-88
AT1G03550.1 | Symbols:  | Secretory carrier membrane protein (SC...   316   1e-86
AT1G32050.1 | Symbols:  | SCAMP family protein | chr1:11528616-1...   275   2e-74

>AT1G61250.1 | Symbols: SC3 | secretory carrier 3 |
           chr1:22586035-22588664 FORWARD LENGTH=289
          Length = 289

 Score =  352 bits (904), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 179/302 (59%), Positives = 202/302 (66%), Gaps = 26/302 (8%)

Query: 1   MAGRYDKNPF-DEEEVNPFSDPAVKGKTSSQSNYSGGAFYTTNPGSVAPASNSRLAPLNP 59
           MA RYD NPF +EEEVNPF+                      N   V PASNSRL+PL P
Sbjct: 1   MANRYDPNPFAEEEEVNPFA----------------------NARGVPPASNSRLSPLPP 38

Query: 60  EPADYNYFGATVDIPXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIVLE 117
           EP  ++Y G TVDIP                                        GIV+E
Sbjct: 39  EPVGFDY-GRTVDIPLDRAGTQDLKKKEKELQAKEAELKRREQDLKRKEDAAARAGIVIE 97

Query: 118 EKNWPPFFPIIHHDIANEIPIHLQRLQYVAFTSLLGLVLCLTWNVVAVTAAWIKGEGVKI 177
            KNWPPFFP+IHHDIANEIP+HLQRLQYV F + LGLVLCL WN++AVT AWIKGEGV I
Sbjct: 98  VKNWPPFFPLIHHDIANEIPVHLQRLQYVTFATYLGLVLCLFWNIIAVTTAWIKGEGVTI 157

Query: 178 WFLAIIYFIAGVPGAYVLWYRPLYRAFRTDSAMKFGWFFLFYLLHLGFCILAAVAPPIVF 237
           W LA+IYFIAGVPG YVLWYRPLYRAFRTDSA+ FGWFFLFY+LH+ FC+ AAVAPP+VF
Sbjct: 158 WLLALIYFIAGVPGGYVLWYRPLYRAFRTDSALSFGWFFLFYMLHIAFCVFAAVAPPVVF 217

Query: 238 KGKSLTGILSAIDVIDDHTVIGILYFIGFGLFCLEILVGIWVIQQVGMYFRGSGKAAEMK 297
           KGKSL GIL AIDV+    ++GI YFIGF  FCLE +V IWVIQQV MYFRGSGK  +M+
Sbjct: 218 KGKSLAGILPAIDVLSGQAIVGIFYFIGFAFFCLESVVSIWVIQQVYMYFRGSGKQDQMR 277

Query: 298 RE 299
           RE
Sbjct: 278 RE 279


>AT1G11180.1 | Symbols:  | Secretory carrier membrane protein
           (SCAMP) family protein | chr1:3745829-3748307 FORWARD
           LENGTH=291
          Length = 291

 Score =  344 bits (882), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 178/304 (58%), Positives = 203/304 (66%), Gaps = 28/304 (9%)

Query: 1   MAGRYDKNPFDEE-EVNPFSDPAVKGKTSSQSNYSGGAFYTTNPGSVAPASNSRLAPLNP 59
           M GRYD+N FDE+ EVNPF+                      NPGSV  ASNSRL+PL P
Sbjct: 1   MGGRYDRNTFDEQDEVNPFA----------------------NPGSVPAASNSRLSPLPP 38

Query: 60  EPADYNYFGATVDIPXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIV 115
           EPA + Y G TVDIP                                          GIV
Sbjct: 39  EPAGFGY-GRTVDIPLDRPGSGAQDLKKKEKELQAKEADLRRREQDLKRKQDAAARAGIV 97

Query: 116 LEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFTSLLGLVLCLTWNVVAVTAAWIKGEGV 175
           +E KNWP FFP+IHHDIANEI + LQRLQY+AF + LGLVL L WN++AVT AWIKGEGV
Sbjct: 98  IEAKNWPTFFPLIHHDIANEILVRLQRLQYIAFATYLGLVLALFWNIIAVTTAWIKGEGV 157

Query: 176 KIWFLAIIYFIAGVPGAYVLWYRPLYRAFRTDSAMKFGWFFLFYLLHLGFCILAAVAPPI 235
            IW LA+IYFI+GVPG YVLWYRPLYRAFR+DSA  FGWFFLFY+LH+ FC+ AAVAPPI
Sbjct: 158 TIWLLAVIYFISGVPGGYVLWYRPLYRAFRSDSAFNFGWFFLFYMLHILFCLFAAVAPPI 217

Query: 236 VFKGKSLTGILSAIDVIDDHTVIGILYFIGFGLFCLEILVGIWVIQQVGMYFRGSGKAAE 295
           VFKGKSL GIL AIDV+    ++GI YFIGFGLFCLE +V IWVIQQV MYFRGSGKA +
Sbjct: 218 VFKGKSLAGILPAIDVLSAQALVGIFYFIGFGLFCLESVVSIWVIQQVYMYFRGSGKADD 277

Query: 296 MKRE 299
           M+R+
Sbjct: 278 MRRD 281


>AT1G11180.2 | Symbols:  | Secretory carrier membrane protein
           (SCAMP) family protein | chr1:3745829-3748307 FORWARD
           LENGTH=304
          Length = 304

 Score =  339 bits (869), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 178/317 (56%), Positives = 203/317 (64%), Gaps = 41/317 (12%)

Query: 1   MAGRYDKNPFDEE-EVNPFSDPAVKGKTSSQSNYSGGAFYTTNPGSVAPASNSRLAPLNP 59
           M GRYD+N FDE+ EVNPF+                      NPGSV  ASNSRL+PL P
Sbjct: 1   MGGRYDRNTFDEQDEVNPFA----------------------NPGSVPAASNSRLSPLPP 38

Query: 60  EPADYNYFGATVDIPXXX-----------------XXXXXXXXXXXXXXXXXXXXXXXXX 102
           EPA + Y G TVDIP                                             
Sbjct: 39  EPAGFGY-GRTVDIPLDRPGSGAQNNSCLNVTLLGIQDLKKKEKELQAKEADLRRREQDL 97

Query: 103 XXXXXXXXXXGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFTSLLGLVLCLTWNV 162
                     GIV+E KNWP FFP+IHHDIANEI + LQRLQY+AF + LGLVL L WN+
Sbjct: 98  KRKQDAAARAGIVIEAKNWPTFFPLIHHDIANEILVRLQRLQYIAFATYLGLVLALFWNI 157

Query: 163 VAVTAAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFRTDSAMKFGWFFLFYLLH 222
           +AVT AWIKGEGV IW LA+IYFI+GVPG YVLWYRPLYRAFR+DSA  FGWFFLFY+LH
Sbjct: 158 IAVTTAWIKGEGVTIWLLAVIYFISGVPGGYVLWYRPLYRAFRSDSAFNFGWFFLFYMLH 217

Query: 223 LGFCILAAVAPPIVFKGKSLTGILSAIDVIDDHTVIGILYFIGFGLFCLEILVGIWVIQQ 282
           + FC+ AAVAPPIVFKGKSL GIL AIDV+    ++GI YFIGFGLFCLE +V IWVIQQ
Sbjct: 218 ILFCLFAAVAPPIVFKGKSLAGILPAIDVLSAQALVGIFYFIGFGLFCLESVVSIWVIQQ 277

Query: 283 VGMYFRGSGKAAEMKRE 299
           V MYFRGSGKA +M+R+
Sbjct: 278 VYMYFRGSGKADDMRRD 294


>AT2G20840.1 | Symbols:  | Secretory carrier membrane protein
           (SCAMP) family protein | chr2:8971925-8974400 REVERSE
           LENGTH=282
          Length = 282

 Score =  330 bits (847), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 178/297 (59%), Positives = 204/297 (68%), Gaps = 26/297 (8%)

Query: 3   GRYDKNPFDEEEVNPFSDPAVKGKTSSQSNYSGGAFYTTNPGSVAPASNSRLAPLNPEPA 62
            RY  + FD+ E+NPF+                      NP SV PA+ S+L+PL PEP 
Sbjct: 2   SRYQSHSFDDGEINPFA----------------------NPTSV-PAATSKLSPLPPEPY 38

Query: 63  DYNYFGATVDIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIVLEEKNWP 122
           D    GAT+DIP                                      GIV+EEKNWP
Sbjct: 39  DR---GATMDIPLDSGKDLKAKEKELREKEAELKRREQEIKRKEDAIAQAGIVIEEKNWP 95

Query: 123 PFFPIIHHDIANEIPIHLQRLQYVAFTSLLGLVLCLTWNVVAVTAAWIKGEGVKIWFLAI 182
           PFFP+IHHDI+NEIPIHLQR+QYVAFTS+LGLV+CL WN+VAVT AWIKGEG  IWFLAI
Sbjct: 96  PFFPLIHHDISNEIPIHLQRIQYVAFTSMLGLVVCLLWNIVAVTTAWIKGEGPTIWFLAI 155

Query: 183 IYFIAGVPGAYVLWYRPLYRAFRTDSAMKFGWFFLFYLLHLGFCILAAVAPPIVFKGKSL 242
           IYFI+GVPGAYV+WYRPLYRA RTDSA+KFGWFF  YL H+ FC+ AAVAPPI+FKGKSL
Sbjct: 156 IYFISGVPGAYVMWYRPLYRAMRTDSALKFGWFFFTYLFHIAFCVFAAVAPPIIFKGKSL 215

Query: 243 TGILSAIDVIDDHTVIGILYFIGFGLFCLEILVGIWVIQQVGMYFRGSGKAAEMKRE 299
           TGIL AIDV+  + ++GI YFIGFG FCLE LV IWVIQQV MYFRGSGKAAEMK+E
Sbjct: 216 TGILPAIDVLSGNILVGIFYFIGFGFFCLESLVSIWVIQQVYMYFRGSGKAAEMKQE 272


>AT1G61250.2 | Symbols: SC3 | secretory carrier 3 |
           chr1:22586035-22588519 FORWARD LENGTH=274
          Length = 274

 Score =  323 bits (827), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 166/284 (58%), Positives = 187/284 (65%), Gaps = 26/284 (9%)

Query: 1   MAGRYDKNPF-DEEEVNPFSDPAVKGKTSSQSNYSGGAFYTTNPGSVAPASNSRLAPLNP 59
           MA RYD NPF +EEEVNPF+                      N   V PASNSRL+PL P
Sbjct: 1   MANRYDPNPFAEEEEVNPFA----------------------NARGVPPASNSRLSPLPP 38

Query: 60  EPADYNYFGATVDIPXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIVLE 117
           EP  ++Y G TVDIP                                        GIV+E
Sbjct: 39  EPVGFDY-GRTVDIPLDRAGTQDLKKKEKELQAKEAELKRREQDLKRKEDAAARAGIVIE 97

Query: 118 EKNWPPFFPIIHHDIANEIPIHLQRLQYVAFTSLLGLVLCLTWNVVAVTAAWIKGEGVKI 177
            KNWPPFFP+IHHDIANEIP+HLQRLQYV F + LGLVLCL WN++AVT AWIKGEGV I
Sbjct: 98  VKNWPPFFPLIHHDIANEIPVHLQRLQYVTFATYLGLVLCLFWNIIAVTTAWIKGEGVTI 157

Query: 178 WFLAIIYFIAGVPGAYVLWYRPLYRAFRTDSAMKFGWFFLFYLLHLGFCILAAVAPPIVF 237
           W LA+IYFIAGVPG YVLWYRPLYRAFRTDSA+ FGWFFLFY+LH+ FC+ AAVAPP+VF
Sbjct: 158 WLLALIYFIAGVPGGYVLWYRPLYRAFRTDSALSFGWFFLFYMLHIAFCVFAAVAPPVVF 217

Query: 238 KGKSLTGILSAIDVIDDHTVIGILYFIGFGLFCLEILVGIWVIQ 281
           KGKSL GIL AIDV+    ++GI YFIGF  FCLE +V IWVIQ
Sbjct: 218 KGKSLAGILPAIDVLSGQAIVGIFYFIGFAFFCLESVVSIWVIQ 261


>AT1G03550.1 | Symbols:  | Secretory carrier membrane protein
           (SCAMP) family protein | chr1:885851-887778 REVERSE
           LENGTH=283
          Length = 283

 Score =  316 bits (810), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 169/297 (56%), Positives = 196/297 (65%), Gaps = 25/297 (8%)

Query: 3   GRYDKNPFDEEEVNPFSDPAVKGKTSSQSNYSGGAFYTTNPGSVAPASNSRLAPLNPEPA 62
            R+D NPF +EE+NPF+                      N  SV PASNS L PL PEP 
Sbjct: 2   ARHDPNPFADEEINPFA----------------------NHTSVPPASNSYLKPLPPEPY 39

Query: 63  DYNYFGATVDIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIVLEEKNWP 122
           D    GATVDIP                                      G+V+EEKNWP
Sbjct: 40  DR---GATVDIPLDSGNDLRAKEMELQAKENELKRKEQELKRREDAIARTGVVIEEKNWP 96

Query: 123 PFFPIIHHDIANEIPIHLQRLQYVAFTSLLGLVLCLTWNVVAVTAAWIKGEGVKIWFLAI 182
            FFP+IHHDI NEIPIHLQ++QYVAFT+LLGLV CL WN+VAVT AWIKGEG  IW L+I
Sbjct: 97  EFFPLIHHDIPNEIPIHLQKIQYVAFTTLLGLVGCLLWNIVAVTVAWIKGEGPTIWLLSI 156

Query: 183 IYFIAGVPGAYVLWYRPLYRAFRTDSAMKFGWFFLFYLLHLGFCILAAVAPPIVFKGKSL 242
           IYF+AGVPGAYVLWYRPLYRA RTDSA+KFG FF FY+ H+ FC  AAVAPP++F+GKSL
Sbjct: 157 IYFLAGVPGAYVLWYRPLYRATRTDSALKFGAFFFFYVFHIAFCGFAAVAPPVIFQGKSL 216

Query: 243 TGILSAIDVIDDHTVIGILYFIGFGLFCLEILVGIWVIQQVGMYFRGSGKAAEMKRE 299
           TG L AI+++  +  +GI+YFIG G FC+E L+ IWVIQQV  YFRGSGKAAEMKRE
Sbjct: 217 TGFLPAIELLTTNAAVGIMYFIGAGFFCIETLLNIWVIQQVYAYFRGSGKAAEMKRE 273


>AT1G32050.1 | Symbols:  | SCAMP family protein |
           chr1:11528616-11530974 FORWARD LENGTH=264
          Length = 264

 Score =  275 bits (704), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 148/293 (50%), Positives = 179/293 (61%), Gaps = 33/293 (11%)

Query: 1   MAGRYDKNPFDEEE--VNPFSDPAVKGKTSSQSNYSGGAFYTTNPGSVAPASNSRLAPLN 58
           M   +D NPFDE+E  VNPFS               GG       G V  AS        
Sbjct: 1   MNRHHDPNPFDEDEEIVNPFS--------------KGG-------GRVPAAS-------- 31

Query: 59  PEPADY-NYFGATVDIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIVLE 117
             P +Y     ATVDIP                                      G+ ++
Sbjct: 32  -RPVEYGQSLDATVDIPLDNMNDSSQKQRKLADWEAELRKKEMDIKRREEAIAKFGVQID 90

Query: 118 EKNWPPFFPIIHHDIANEIPIHLQRLQYVAFTSLLGLVLCLTWNVVAVTAAWIKGEGVKI 177
           +KNWPPFFPIIHHDIA EIP+H Q+LQY+AF S LG+VLCL +NV+A    WIKG GVKI
Sbjct: 91  DKNWPPFFPIIHHDIAKEIPVHAQKLQYLAFASWLGIVLCLVFNVIATMVCWIKGGGVKI 150

Query: 178 WFLAIIYFIAGVPGAYVLWYRPLYRAFRTDSAMKFGWFFLFYLLHLGFCILAAVAPPIVF 237
           +FLA IY + G P +YVLWYRPLYRA RTDSA+KFGWFF  YL+H+GFCI+AA+APPI F
Sbjct: 151 FFLATIYALIGCPLSYVLWYRPLYRAMRTDSALKFGWFFFTYLIHIGFCIVAAIAPPIFF 210

Query: 238 KGKSLTGILSAIDVIDDHTVIGILYFIGFGLFCLEILVGIWVIQQVGMYFRGS 290
            GKSLTG+L+AIDVI D  + GI YFIGFGLFCLE L+ +WV+Q++ +YFRG+
Sbjct: 211 HGKSLTGVLAAIDVISDSLLAGIFYFIGFGLFCLESLLSLWVLQKIYLYFRGN 263