Miyakogusa Predicted Gene

Lj6g3v2078140.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2078140.1 Non Chatacterized Hit- tr|I1MEC0|I1MEC0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.30902
PE,83.61,0,seg,NULL; SECRETORY CARRIER-ASSOCIATED MEMBRANE
PROTEIN,NULL; SECRETORY CARRIER-ASSOCIATED MEMBRANE ,CUFF.60627.1
         (277 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G61250.1 | Symbols: SC3 | secretory carrier 3 | chr1:22586035...   363   e-101
AT1G11180.1 | Symbols:  | Secretory carrier membrane protein (SC...   355   2e-98
AT1G11180.2 | Symbols:  | Secretory carrier membrane protein (SC...   350   5e-97
AT2G20840.1 | Symbols:  | Secretory carrier membrane protein (SC...   342   1e-94
AT1G61250.2 | Symbols: SC3 | secretory carrier 3 | chr1:22586035...   334   4e-92
AT1G03550.1 | Symbols:  | Secretory carrier membrane protein (SC...   328   3e-90
AT1G32050.1 | Symbols:  | SCAMP family protein | chr1:11528616-1...   287   5e-78

>AT1G61250.1 | Symbols: SC3 | secretory carrier 3 |
           chr1:22586035-22588664 FORWARD LENGTH=289
          Length = 289

 Score =  363 bits (933), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 179/280 (63%), Positives = 202/280 (72%), Gaps = 4/280 (1%)

Query: 1   MAGRYDKNPF-DEEEVNPFSNPGSVAPASNSRLAPLNPEPADYNYFGATVDIPXXXXXXX 59
           MA RYD NPF +EEEVNPF+N   V PASNSRL+PL PEP  ++Y G TVDIP       
Sbjct: 1   MANRYDPNPFAEEEEVNPFANARGVPPASNSRLSPLPPEPVGFDY-GRTVDIPLDRAGTQ 59

Query: 60  XXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXGIVLEEKNWPPFFPIIHHDIANEIPIH 117
                                            GIV+E KNWPPFFP+IHHDIANEIP+H
Sbjct: 60  DLKKKEKELQAKEAELKRREQDLKRKEDAAARAGIVIEVKNWPPFFPLIHHDIANEIPVH 119

Query: 118 LQRLQYVAFTSLLGLVLCLTWNVVAVTAAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRP 177
           LQRLQYV F + LGLVLCL WN++AVT AWIKGEGV IW LA+IYFIAGVPG YVLWYRP
Sbjct: 120 LQRLQYVTFATYLGLVLCLFWNIIAVTTAWIKGEGVTIWLLALIYFIAGVPGGYVLWYRP 179

Query: 178 LYRAFRTDSAMKFGWFFLFYLLHLGFCILAAVAPPIVFKGKSLTGILSAIDVIDDHTVIG 237
           LYRAFRTDSA+ FGWFFLFY+LH+ FC+ AAVAPP+VFKGKSL GIL AIDV+    ++G
Sbjct: 180 LYRAFRTDSALSFGWFFLFYMLHIAFCVFAAVAPPVVFKGKSLAGILPAIDVLSGQAIVG 239

Query: 238 ILYFIGFGLFCLEILVGIWVIQQVGMYFRGSGKAAEMKRE 277
           I YFIGF  FCLE +V IWVIQQV MYFRGSGK  +M+RE
Sbjct: 240 IFYFIGFAFFCLESVVSIWVIQQVYMYFRGSGKQDQMRRE 279


>AT1G11180.1 | Symbols:  | Secretory carrier membrane protein
           (SCAMP) family protein | chr1:3745829-3748307 FORWARD
           LENGTH=291
          Length = 291

 Score =  355 bits (912), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 178/282 (63%), Positives = 203/282 (71%), Gaps = 6/282 (2%)

Query: 1   MAGRYDKNPFDEE-EVNPFSNPGSVAPASNSRLAPLNPEPADYNYFGATVDIPXXX---- 55
           M GRYD+N FDE+ EVNPF+NPGSV  ASNSRL+PL PEPA + Y G TVDIP       
Sbjct: 1   MGGRYDRNTFDEQDEVNPFANPGSVPAASNSRLSPLPPEPAGFGY-GRTVDIPLDRPGSG 59

Query: 56  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIVLEEKNWPPFFPIIHHDIANEIP 115
                                              GIV+E KNWP FFP+IHHDIANEI 
Sbjct: 60  AQDLKKKEKELQAKEADLRRREQDLKRKQDAAARAGIVIEAKNWPTFFPLIHHDIANEIL 119

Query: 116 IHLQRLQYVAFTSLLGLVLCLTWNVVAVTAAWIKGEGVKIWFLAIIYFIAGVPGAYVLWY 175
           + LQRLQY+AF + LGLVL L WN++AVT AWIKGEGV IW LA+IYFI+GVPG YVLWY
Sbjct: 120 VRLQRLQYIAFATYLGLVLALFWNIIAVTTAWIKGEGVTIWLLAVIYFISGVPGGYVLWY 179

Query: 176 RPLYRAFRTDSAMKFGWFFLFYLLHLGFCILAAVAPPIVFKGKSLTGILSAIDVIDDHTV 235
           RPLYRAFR+DSA  FGWFFLFY+LH+ FC+ AAVAPPIVFKGKSL GIL AIDV+    +
Sbjct: 180 RPLYRAFRSDSAFNFGWFFLFYMLHILFCLFAAVAPPIVFKGKSLAGILPAIDVLSAQAL 239

Query: 236 IGILYFIGFGLFCLEILVGIWVIQQVGMYFRGSGKAAEMKRE 277
           +GI YFIGFGLFCLE +V IWVIQQV MYFRGSGKA +M+R+
Sbjct: 240 VGIFYFIGFGLFCLESVVSIWVIQQVYMYFRGSGKADDMRRD 281


>AT1G11180.2 | Symbols:  | Secretory carrier membrane protein
           (SCAMP) family protein | chr1:3745829-3748307 FORWARD
           LENGTH=304
          Length = 304

 Score =  350 bits (898), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 178/295 (60%), Positives = 203/295 (68%), Gaps = 19/295 (6%)

Query: 1   MAGRYDKNPFDEE-EVNPFSNPGSVAPASNSRLAPLNPEPADYNYFGATVDIPXXX---- 55
           M GRYD+N FDE+ EVNPF+NPGSV  ASNSRL+PL PEPA + Y G TVDIP       
Sbjct: 1   MGGRYDRNTFDEQDEVNPFANPGSVPAASNSRLSPLPPEPAGFGY-GRTVDIPLDRPGSG 59

Query: 56  -------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIVLEEKNWPPF 102
                                                           GIV+E KNWP F
Sbjct: 60  AQNNSCLNVTLLGIQDLKKKEKELQAKEADLRRREQDLKRKQDAAARAGIVIEAKNWPTF 119

Query: 103 FPIIHHDIANEIPIHLQRLQYVAFTSLLGLVLCLTWNVVAVTAAWIKGEGVKIWFLAIIY 162
           FP+IHHDIANEI + LQRLQY+AF + LGLVL L WN++AVT AWIKGEGV IW LA+IY
Sbjct: 120 FPLIHHDIANEILVRLQRLQYIAFATYLGLVLALFWNIIAVTTAWIKGEGVTIWLLAVIY 179

Query: 163 FIAGVPGAYVLWYRPLYRAFRTDSAMKFGWFFLFYLLHLGFCILAAVAPPIVFKGKSLTG 222
           FI+GVPG YVLWYRPLYRAFR+DSA  FGWFFLFY+LH+ FC+ AAVAPPIVFKGKSL G
Sbjct: 180 FISGVPGGYVLWYRPLYRAFRSDSAFNFGWFFLFYMLHILFCLFAAVAPPIVFKGKSLAG 239

Query: 223 ILSAIDVIDDHTVIGILYFIGFGLFCLEILVGIWVIQQVGMYFRGSGKAAEMKRE 277
           IL AIDV+    ++GI YFIGFGLFCLE +V IWVIQQV MYFRGSGKA +M+R+
Sbjct: 240 ILPAIDVLSAQALVGIFYFIGFGLFCLESVVSIWVIQQVYMYFRGSGKADDMRRD 294


>AT2G20840.1 | Symbols:  | Secretory carrier membrane protein
           (SCAMP) family protein | chr2:8971925-8974400 REVERSE
           LENGTH=282
          Length = 282

 Score =  342 bits (878), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 178/275 (64%), Positives = 204/275 (74%), Gaps = 4/275 (1%)

Query: 3   GRYDKNPFDEEEVNPFSNPGSVAPASNSRLAPLNPEPADYNYFGATVDIPXXXXXXXXXX 62
            RY  + FD+ E+NPF+NP SV PA+ S+L+PL PEP D    GAT+DIP          
Sbjct: 2   SRYQSHSFDDGEINPFANPTSV-PAATSKLSPLPPEPYDR---GATMDIPLDSGKDLKAK 57

Query: 63  XXXXXXXXXXXXXXXXXXXXXXXXXXXXGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQ 122
                                       GIV+EEKNWPPFFP+IHHDI+NEIPIHLQR+Q
Sbjct: 58  EKELREKEAELKRREQEIKRKEDAIAQAGIVIEEKNWPPFFPLIHHDISNEIPIHLQRIQ 117

Query: 123 YVAFTSLLGLVLCLTWNVVAVTAAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAF 182
           YVAFTS+LGLV+CL WN+VAVT AWIKGEG  IWFLAIIYFI+GVPGAYV+WYRPLYRA 
Sbjct: 118 YVAFTSMLGLVVCLLWNIVAVTTAWIKGEGPTIWFLAIIYFISGVPGAYVMWYRPLYRAM 177

Query: 183 RTDSAMKFGWFFLFYLLHLGFCILAAVAPPIVFKGKSLTGILSAIDVIDDHTVIGILYFI 242
           RTDSA+KFGWFF  YL H+ FC+ AAVAPPI+FKGKSLTGIL AIDV+  + ++GI YFI
Sbjct: 178 RTDSALKFGWFFFTYLFHIAFCVFAAVAPPIIFKGKSLTGILPAIDVLSGNILVGIFYFI 237

Query: 243 GFGLFCLEILVGIWVIQQVGMYFRGSGKAAEMKRE 277
           GFG FCLE LV IWVIQQV MYFRGSGKAAEMK+E
Sbjct: 238 GFGFFCLESLVSIWVIQQVYMYFRGSGKAAEMKQE 272


>AT1G61250.2 | Symbols: SC3 | secretory carrier 3 |
           chr1:22586035-22588519 FORWARD LENGTH=274
          Length = 274

 Score =  334 bits (856), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 166/262 (63%), Positives = 187/262 (71%), Gaps = 4/262 (1%)

Query: 1   MAGRYDKNPF-DEEEVNPFSNPGSVAPASNSRLAPLNPEPADYNYFGATVDIPXXX--XX 57
           MA RYD NPF +EEEVNPF+N   V PASNSRL+PL PEP  ++Y G TVDIP       
Sbjct: 1   MANRYDPNPFAEEEEVNPFANARGVPPASNSRLSPLPPEPVGFDY-GRTVDIPLDRAGTQ 59

Query: 58  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIVLEEKNWPPFFPIIHHDIANEIPIH 117
                                            GIV+E KNWPPFFP+IHHDIANEIP+H
Sbjct: 60  DLKKKEKELQAKEAELKRREQDLKRKEDAAARAGIVIEVKNWPPFFPLIHHDIANEIPVH 119

Query: 118 LQRLQYVAFTSLLGLVLCLTWNVVAVTAAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRP 177
           LQRLQYV F + LGLVLCL WN++AVT AWIKGEGV IW LA+IYFIAGVPG YVLWYRP
Sbjct: 120 LQRLQYVTFATYLGLVLCLFWNIIAVTTAWIKGEGVTIWLLALIYFIAGVPGGYVLWYRP 179

Query: 178 LYRAFRTDSAMKFGWFFLFYLLHLGFCILAAVAPPIVFKGKSLTGILSAIDVIDDHTVIG 237
           LYRAFRTDSA+ FGWFFLFY+LH+ FC+ AAVAPP+VFKGKSL GIL AIDV+    ++G
Sbjct: 180 LYRAFRTDSALSFGWFFLFYMLHIAFCVFAAVAPPVVFKGKSLAGILPAIDVLSGQAIVG 239

Query: 238 ILYFIGFGLFCLEILVGIWVIQ 259
           I YFIGF  FCLE +V IWVIQ
Sbjct: 240 IFYFIGFAFFCLESVVSIWVIQ 261


>AT1G03550.1 | Symbols:  | Secretory carrier membrane protein
           (SCAMP) family protein | chr1:885851-887778 REVERSE
           LENGTH=283
          Length = 283

 Score =  328 bits (840), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 169/275 (61%), Positives = 196/275 (71%), Gaps = 3/275 (1%)

Query: 3   GRYDKNPFDEEEVNPFSNPGSVAPASNSRLAPLNPEPADYNYFGATVDIPXXXXXXXXXX 62
            R+D NPF +EE+NPF+N  SV PASNS L PL PEP D    GATVDIP          
Sbjct: 2   ARHDPNPFADEEINPFANHTSVPPASNSYLKPLPPEPYDR---GATVDIPLDSGNDLRAK 58

Query: 63  XXXXXXXXXXXXXXXXXXXXXXXXXXXXGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQ 122
                                       G+V+EEKNWP FFP+IHHDI NEIPIHLQ++Q
Sbjct: 59  EMELQAKENELKRKEQELKRREDAIARTGVVIEEKNWPEFFPLIHHDIPNEIPIHLQKIQ 118

Query: 123 YVAFTSLLGLVLCLTWNVVAVTAAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAF 182
           YVAFT+LLGLV CL WN+VAVT AWIKGEG  IW L+IIYF+AGVPGAYVLWYRPLYRA 
Sbjct: 119 YVAFTTLLGLVGCLLWNIVAVTVAWIKGEGPTIWLLSIIYFLAGVPGAYVLWYRPLYRAT 178

Query: 183 RTDSAMKFGWFFLFYLLHLGFCILAAVAPPIVFKGKSLTGILSAIDVIDDHTVIGILYFI 242
           RTDSA+KFG FF FY+ H+ FC  AAVAPP++F+GKSLTG L AI+++  +  +GI+YFI
Sbjct: 179 RTDSALKFGAFFFFYVFHIAFCGFAAVAPPVIFQGKSLTGFLPAIELLTTNAAVGIMYFI 238

Query: 243 GFGLFCLEILVGIWVIQQVGMYFRGSGKAAEMKRE 277
           G G FC+E L+ IWVIQQV  YFRGSGKAAEMKRE
Sbjct: 239 GAGFFCIETLLNIWVIQQVYAYFRGSGKAAEMKRE 273


>AT1G32050.1 | Symbols:  | SCAMP family protein |
           chr1:11528616-11530974 FORWARD LENGTH=264
          Length = 264

 Score =  287 bits (735), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 145/271 (53%), Positives = 178/271 (65%), Gaps = 11/271 (4%)

Query: 1   MAGRYDKNPFDEEE--VNPFSNPGSVAPASNSRLAPLNPEPADY-NYFGATVDIPXXXXX 57
           M   +D NPFDE+E  VNPFS  G   PA++         P +Y     ATVDIP     
Sbjct: 1   MNRHHDPNPFDEDEEIVNPFSKGGGRVPAAS--------RPVEYGQSLDATVDIPLDNMN 52

Query: 58  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIVLEEKNWPPFFPIIHHDIANEIPIH 117
                                            G+ +++KNWPPFFPIIHHDIA EIP+H
Sbjct: 53  DSSQKQRKLADWEAELRKKEMDIKRREEAIAKFGVQIDDKNWPPFFPIIHHDIAKEIPVH 112

Query: 118 LQRLQYVAFTSLLGLVLCLTWNVVAVTAAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRP 177
            Q+LQY+AF S LG+VLCL +NV+A    WIKG GVKI+FLA IY + G P +YVLWYRP
Sbjct: 113 AQKLQYLAFASWLGIVLCLVFNVIATMVCWIKGGGVKIFFLATIYALIGCPLSYVLWYRP 172

Query: 178 LYRAFRTDSAMKFGWFFLFYLLHLGFCILAAVAPPIVFKGKSLTGILSAIDVIDDHTVIG 237
           LYRA RTDSA+KFGWFF  YL+H+GFCI+AA+APPI F GKSLTG+L+AIDVI D  + G
Sbjct: 173 LYRAMRTDSALKFGWFFFTYLIHIGFCIVAAIAPPIFFHGKSLTGVLAAIDVISDSLLAG 232

Query: 238 ILYFIGFGLFCLEILVGIWVIQQVGMYFRGS 268
           I YFIGFGLFCLE L+ +WV+Q++ +YFRG+
Sbjct: 233 IFYFIGFGLFCLESLLSLWVLQKIYLYFRGN 263