Miyakogusa Predicted Gene
- Lj6g3v2055760.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v2055760.1 tr|A9TGE6|A9TGE6_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_169940,27.46,3e-18,seg,NULL; Kelch motif,NULL;
Kelch_1,Kelch repeat type 1; no description,Kelch repeat type 1;
SUBFAMI,CUFF.60610.1
(344 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G16250.1 | Symbols: | Galactose oxidase/kelch repeat superfa... 89 5e-18
AT1G67480.2 | Symbols: | Galactose oxidase/kelch repeat superfa... 74 2e-13
AT1G67480.1 | Symbols: | Galactose oxidase/kelch repeat superfa... 74 2e-13
AT3G63220.1 | Symbols: | Galactose oxidase/kelch repeat superfa... 72 7e-13
AT3G63220.2 | Symbols: | Galactose oxidase/kelch repeat superfa... 72 8e-13
AT5G60570.1 | Symbols: | Galactose oxidase/kelch repeat superfa... 70 3e-12
AT1G26930.1 | Symbols: | Galactose oxidase/kelch repeat superfa... 64 1e-10
AT1G55270.1 | Symbols: | Galactose oxidase/kelch repeat superfa... 62 7e-10
AT4G03030.1 | Symbols: | Galactose oxidase/kelch repeat superfa... 60 2e-09
AT1G74510.1 | Symbols: | Galactose oxidase/kelch repeat superfa... 60 2e-09
AT1G74510.2 | Symbols: | Galactose oxidase/kelch repeat superfa... 60 2e-09
AT5G26960.1 | Symbols: | Galactose oxidase/kelch repeat superfa... 60 2e-09
AT3G27150.1 | Symbols: | Galactose oxidase/kelch repeat superfa... 60 2e-09
AT3G59940.1 | Symbols: | Galactose oxidase/kelch repeat superfa... 57 2e-08
AT1G80440.1 | Symbols: | Galactose oxidase/kelch repeat superfa... 57 2e-08
AT5G01660.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Galactose ... 55 7e-08
AT2G44130.1 | Symbols: | Galactose oxidase/kelch repeat superfa... 54 1e-07
AT2G02870.3 | Symbols: | Galactose oxidase/kelch repeat superfa... 53 4e-07
AT2G02870.2 | Symbols: | Galactose oxidase/kelch repeat superfa... 53 4e-07
AT2G02870.1 | Symbols: | Galactose oxidase/kelch repeat superfa... 53 4e-07
AT1G14330.1 | Symbols: | Galactose oxidase/kelch repeat superfa... 52 5e-07
AT3G43710.1 | Symbols: | Galactose oxidase/kelch repeat superfa... 51 1e-06
AT5G40680.1 | Symbols: | Galactose oxidase/kelch repeat superfa... 48 9e-06
>AT1G16250.1 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr1:5557214-5558697 FORWARD
LENGTH=383
Length = 383
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 19/194 (9%)
Query: 45 YHPSMNTWTYVSSIPGLLHDQVLKGFAMVSLGDFIYIIGGQICHKEMVHVNDESADFVDE 104
Y P + W + + GFA V + + + +IGG C+ V + F +
Sbjct: 76 YDPEADRWHPLPRTRAVQDGWHHSGFACVCVSNCLLVIGG--CYAPSV------SSFPHQ 127
Query: 105 GIQVVTNVLRYNVRTNQWFTCAPLSVARYDFACTVSDNKIYVAGGKSTLASARGISSSEV 164
V +V+R++ QW A + R FACT K+YVAGG++ L +RGI S+EV
Sbjct: 128 KPVVTKDVMRFDPFKKQWKMVASMRTPRTHFACTSVSGKVYVAGGRN-LTHSRGIPSAEV 186
Query: 165 YDPDLDIWMTLPNLHTLRYKCTGVTWQGNVYIVGGFAEREDSDKTMPSIVERSSAEVYDT 224
YDP D W LP + + C+G++++G +++ SD+ E++S+EV++
Sbjct: 187 YDPVADRWEELPAMPRPQMDCSGLSYRGCFHVL--------SDQV--GFAEQNSSEVFNP 236
Query: 225 QAGRWELITGMWQL 238
+ W + +W
Sbjct: 237 RDMTWSTVEDVWPF 250
>AT1G67480.2 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr1:25277294-25278529 FORWARD
LENGTH=376
Length = 376
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 110 TNVLRYNVRTNQWFTCAPLSVARYDFACTVSDNKIYVAGGKSTLASARGISSSEVYDPDL 169
+V +Y+ N W A L VARYDFAC + +YV GG +SS+EVYDP+
Sbjct: 157 ADVYQYDTCLNSWSRLADLEVARYDFACAEVNGHVYVVGGHGV--DGESLSSAEVYDPET 214
Query: 170 DIWMTLPNLHTLRYKCTGVTWQGNVYIVGGFAEREDSDKTMPSIVERSSAEVYDTQAGRW 229
W + +L R+ C + G +Y++GG ++ +I +VY+TQ G W
Sbjct: 215 CTWTFIESLRRPRWGCFASAFNGKLYVMGG--------RSNFTIGNSKLLDVYNTQCGSW 266
>AT1G67480.1 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr1:25277294-25278529 FORWARD
LENGTH=376
Length = 376
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 110 TNVLRYNVRTNQWFTCAPLSVARYDFACTVSDNKIYVAGGKSTLASARGISSSEVYDPDL 169
+V +Y+ N W A L VARYDFAC + +YV GG +SS+EVYDP+
Sbjct: 157 ADVYQYDTCLNSWSRLADLEVARYDFACAEVNGHVYVVGGHGV--DGESLSSAEVYDPET 214
Query: 170 DIWMTLPNLHTLRYKCTGVTWQGNVYIVGGFAEREDSDKTMPSIVERSSAEVYDTQAGRW 229
W + +L R+ C + G +Y++GG ++ +I +VY+TQ G W
Sbjct: 215 CTWTFIESLRRPRWGCFASAFNGKLYVMGG--------RSNFTIGNSKLLDVYNTQCGSW 266
>AT3G63220.1 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr3:23357540-23358577 REVERSE
LENGTH=345
Length = 345
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 12/159 (7%)
Query: 40 NSIEIYHPSMNTWTYVSSIPGLLHDQVLKGFAMVSLGDFIYIIGGQICHKEMVHVNDESA 99
N ++Y P+ + W + +P + L F V+ ++++GG V D
Sbjct: 67 NIWQVYSPNCDRWLTLPLLPSRIRH--LAHFGAVTTAGMLFVLGGGSDAVSPV-TGDHDG 123
Query: 100 DFVDEGIQVVTNVLRYNVRTNQWFTCAPLSVARYDFACTVSDNKIYVAGGKSTLASARGI 159
F + V Y+ QW A + V R FAC V KI VAGG +T + I
Sbjct: 124 TFATD------QVWSYDFVQRQWTPRASMLVPRAMFACCVLQGKIVVAGGFTT--CRKSI 175
Query: 160 SSSEVYDPDLDIWMTLPNLH-TLRYKCTGVTWQGNVYIV 197
S +E+YDP+ D+W ++P+LH T C+G+ G V+++
Sbjct: 176 SGAEMYDPENDVWTSIPDLHQTHNSACSGLVVNGKVHVL 214
>AT3G63220.2 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr3:23357540-23358598 REVERSE
LENGTH=352
Length = 352
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 12/159 (7%)
Query: 40 NSIEIYHPSMNTWTYVSSIPGLLHDQVLKGFAMVSLGDFIYIIGGQICHKEMVHVNDESA 99
N ++Y P+ + W + +P + L F V+ ++++GG V D
Sbjct: 74 NIWQVYSPNCDRWLTLPLLPSRIRH--LAHFGAVTTAGMLFVLGGGSDAVSPV-TGDHDG 130
Query: 100 DFVDEGIQVVTNVLRYNVRTNQWFTCAPLSVARYDFACTVSDNKIYVAGGKSTLASARGI 159
F + V Y+ QW A + V R FAC V KI VAGG +T + I
Sbjct: 131 TFATD------QVWSYDFVQRQWTPRASMLVPRAMFACCVLQGKIVVAGGFTT--CRKSI 182
Query: 160 SSSEVYDPDLDIWMTLPNLH-TLRYKCTGVTWQGNVYIV 197
S +E+YDP+ D+W ++P+LH T C+G+ G V+++
Sbjct: 183 SGAEMYDPENDVWTSIPDLHQTHNSACSGLVVNGKVHVL 221
>AT5G60570.1 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr5:24348713-24349894 FORWARD
LENGTH=393
Length = 393
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 17/170 (10%)
Query: 89 KEMVHVNDESADFVDEGIQVVTNVLRYNVRTNQWFTCAPLSVARYDFACTVSDNKIYVAG 148
KE + V+DE F E Q + +Y++R+ W C + R FA VAG
Sbjct: 139 KESLAVDDELLVFGRELFQFA--IWKYSLRSRCWVKCEGMHRPRCLFASGSLGGIAIVAG 196
Query: 149 GKSTLASARGISSSEVYDPDLDIWMTLPNLHTLRYKCTGVTWQGNVYIVGGFAEREDSDK 208
G T + ++S+E+YD W LPN+H+ R C+G G Y++GG +
Sbjct: 197 G--TDMNGNILASAELYDSSSGRWEMLPNMHSPRRLCSGFFMDGKFYVIGGMSSPN---- 250
Query: 209 TMPSIVERSSAEVYDTQAGRWELITGMW----QLDVPPNQIVAVNDTLFS 254
V + E +D + +W I GM+ + P +V VN+ LF+
Sbjct: 251 -----VSVTFGEEFDLETRKWRKIEGMYPNVNRAAQAPPLVVVVNNELFT 295
>AT1G26930.1 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr1:9336211-9337476 REVERSE
LENGTH=421
Length = 421
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 24/179 (13%)
Query: 112 VLRYNVRTNQWFTCAPLSVARYDFACTVSDNKIYVAGGKSTLASARGISSSEVYDPDLDI 171
+ RY++ TN W T +++ R F +AGG + S R + ++E+Y+ +
Sbjct: 182 IYRYSLLTNSWSTAKSMNMPRCLFGSASYGEIAVLAGGCDS--SGRILDTAELYNYEDQT 239
Query: 172 WMTLPNLHTLRYKCTGVTWQGNVYIVGGFAEREDSDKTMPSIVERSSAEVYDTQAGRWEL 231
W+ LP ++ R C+GV G Y++GG E+++ P ++ + E +D + +W
Sbjct: 240 WLVLPGMNKRRKMCSGVFMDGKFYVIGGIGVGEENE---PKVL--TCGEEFDLKTRKWTE 294
Query: 232 I-----------TGMWQLDVPPNQIVAVNDTLFSSGDCLNAWKGHIESYD--GKLWNEV 277
I GM + P + VND L+++ A + YD ++WN+V
Sbjct: 295 IPEMSPPRSNQGNGMSAAAMAPPLVAVVNDQLYAADHAGMA----VRRYDKEKRVWNKV 349
>AT1G55270.1 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr1:20618333-20619925 REVERSE
LENGTH=434
Length = 434
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 98/241 (40%), Gaps = 41/241 (17%)
Query: 45 YHPSMNTWTYVSSIPGLLHDQVLKGFAMVSLGDFIYIIGGQICHKEMVHVNDESADFVDE 104
+ P W + +P + V G A++S G +Y+ GG+ D
Sbjct: 148 FDPISQLWQPLPPVPREYSEAVGFGCAVLS-GCHLYLFGGK-----------------DP 189
Query: 105 GIQVVTNVLRYNVRTNQWFTCAPLSVARYDFACTVSDNKIYVAGGKSTLASARGISSSEV 164
+ V+ YN RTN+W + R+ F C V +N +YVAGG+ R + S+EV
Sbjct: 190 LRGSMRRVIFYNARTNKWHRAPDMLRKRHFFGCCVINNCLYVAGGECE-GIQRTLRSAEV 248
Query: 165 YDPDLDIWMTLPNLHTLRYKCTGVTWQGNVYIVGGFAEREDSDKTMPSIVERSSAEVYDT 224
YDP+ + W + ++ T GV + ++ G + + +E YD
Sbjct: 249 YDPNKNRWSFIADMSTAMVPLIGVVYDKKWFLKGLGSH------------QLVMSEAYDP 296
Query: 225 QAGRWELIT-GM---WQLDVPPNQIVAVNDTLFSSGDCLNAWKGHIESYDGKLWNEVEGS 280
+ W ++ GM W+ N ++N L+ DC + K + WN+ S
Sbjct: 297 EVNSWSPVSDGMVAGWR-----NPCTSLNGRLYGL-DCRDGCKLRVFDESTDSWNKFMDS 350
Query: 281 R 281
+
Sbjct: 351 K 351
>AT4G03030.1 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr4:1335942-1337270 REVERSE
LENGTH=442
Length = 442
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 95/229 (41%), Gaps = 32/229 (13%)
Query: 44 IYHPSMNTWTYVSSIPGLLHDQVLKGFAMVSLGDFIYIIGGQICHKEMVHVNDESADFVD 103
++ P +W + +P H L F V+LG ++Y++GG D + +D
Sbjct: 111 LFDPVTLSWRSLPLMPCNPHVYGLCNFVAVALGPYVYVLGGS--------AFDTRSYPLD 162
Query: 104 EGIQVVTNVLRYNVRTNQWFTCAPLSVARYDFACTV---SDNKIYVAGGKS--TLASARG 158
+ ++V RY+ + W +P+ R FAC S +I VAGG S TL A G
Sbjct: 163 VPLP-TSSVFRYSFVKSVWERLSPMMSPRGSFACAAMPGSCGRIIVAGGGSRHTLFGAAG 221
Query: 159 --ISSSEVYDPDLDIWMTLPNLHTLRYKCTGV-----------TWQGNVYIVGGFAERED 205
+SS E+YD + D W + L R C G +++GG+
Sbjct: 222 SRMSSVEMYDVEKDEWRVMNELPRFRAGCVGFLVENEKEKEKEEEGREFWVMGGYGGSRT 281
Query: 206 SDKTMPSIVERSSAEVYDTQAG---RWELITGMWQLDVPPN--QIVAVN 249
+P A V D + +W ++ MW + P +IVAV+
Sbjct: 282 VSGILPVDEYYKDAVVMDLRVDGGEKWRVVGDMWGEEERPKLGKIVAVD 330
>AT1G74510.1 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr1:28006065-28007420 FORWARD
LENGTH=451
Length = 451
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 39/211 (18%)
Query: 89 KEMVHVNDESADFVDEGIQVVTNVL-RYNVRTNQWFTCAPLSVARYDFACTVSDNKIYVA 147
KE + V E F G +++++V+ RY++ TN W + ++V R F +A
Sbjct: 185 KESLAVGTELLVF---GKEIMSHVIYRYSILTNTWTSGMQMNVPRCLFGSASLGEIAVIA 241
Query: 148 GGKSTLASARGISSSEVYDPDLDIWMTLPNLHTLRYKCTGVTWQGNVYIVGGFAEREDSD 207
GG R +SS+E+Y+ + W +P+++ R C+ V GN Y +GG E +
Sbjct: 242 GGCD--PRGRILSSAELYNSETGEWTVIPSMNKARKMCSSVFMDGNFYCIGGIG--EGNS 297
Query: 208 KTMPSIVERSSAEVYDTQAGRWELITGMW-------------------QLDVPPNQIVAV 248
K + EVYD + W LI M P + V
Sbjct: 298 KML------LCGEVYDLKKKTWTLIPNMLPERSSGGGGDQAKEIAAATAASEAPPLVAVV 351
Query: 249 NDTLFSSGDCLNAWKGHIESYDGKL--WNEV 277
D L+++ N + ++ YD +L WN+V
Sbjct: 352 KDELYAA----NYAQQEVKKYDKRLNVWNKV 378
>AT1G74510.2 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr1:28006065-28007420 FORWARD
LENGTH=451
Length = 451
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 39/211 (18%)
Query: 89 KEMVHVNDESADFVDEGIQVVTNVL-RYNVRTNQWFTCAPLSVARYDFACTVSDNKIYVA 147
KE + V E F G +++++V+ RY++ TN W + ++V R F +A
Sbjct: 185 KESLAVGTELLVF---GKEIMSHVIYRYSILTNTWTSGMQMNVPRCLFGSASLGEIAVIA 241
Query: 148 GGKSTLASARGISSSEVYDPDLDIWMTLPNLHTLRYKCTGVTWQGNVYIVGGFAEREDSD 207
GG R +SS+E+Y+ + W +P+++ R C+ V GN Y +GG E +
Sbjct: 242 GGCD--PRGRILSSAELYNSETGEWTVIPSMNKARKMCSSVFMDGNFYCIGGIG--EGNS 297
Query: 208 KTMPSIVERSSAEVYDTQAGRWELITGMW-------------------QLDVPPNQIVAV 248
K + EVYD + W LI M P + V
Sbjct: 298 KML------LCGEVYDLKKKTWTLIPNMLPERSSGGGGDQAKEIAAATAASEAPPLVAVV 351
Query: 249 NDTLFSSGDCLNAWKGHIESYDGKL--WNEV 277
D L+++ N + ++ YD +L WN+V
Sbjct: 352 KDELYAA----NYAQQEVKKYDKRLNVWNKV 378
>AT5G26960.1 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr5:9484908-9486149 REVERSE
LENGTH=413
Length = 413
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Query: 112 VLRYNVRTNQWFTCAPLSVARYDFACTVSDNKIYVAGGKSTLASARGISSSEVYDPDLDI 171
VLRY+ +P+ R FA V KIYVAGG A + E YDP+L+
Sbjct: 161 VLRYDSWMGTLNLRSPMIFPRKKFAIAVVSGKIYVAGGGGGSEVAAAV---EEYDPELNR 217
Query: 172 WMTLPNLHTLRYKCTGVTWQGNVYIVGGFAEREDSDKTMPSIVERSSAEVYDTQAGRW 229
W + RY C G G Y++GG ++ + + + SS +++D ++ +W
Sbjct: 218 WEVVTQSARKRYGCIGAAVDGVFYVIGGLKIGNETSRAVAARAYASSMDLFDVESRQW 275
>AT3G27150.1 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr3:10009692-10010960 REVERSE
LENGTH=422
Length = 422
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 114 RYNVRTNQWFTCAPLSVARYDFACTVSDNKIYVAGGKSTLASA--RGISSSEVYDPDLDI 171
RY + T++WF + R FA ++VAGG + + S E YD
Sbjct: 184 RYELETSKWFKGPAMITPRILFASATCGTVVFVAGGLKIEGNGTMEVVDSVEKYDSKTKT 243
Query: 172 WMTLPNLHTLRYKCTGVTWQGNVYIVGGFAEREDSDKTMPSIVERSSAEVYDTQAGRWEL 231
W L +H R C+G +G Y++GG R+++ + + + E YD + WEL
Sbjct: 244 WTLLRGMHKRRKFCSGCYLRGKFYVLGG---RDENGQNL------TCGESYDEKTNTWEL 294
Query: 232 ITGMWQ------LDVPPNQIVAVNDTLFS 254
I + + + PP I V D L+S
Sbjct: 295 IPDILKDMSFSSVQSPP-LIAVVGDDLYS 322
>AT3G59940.1 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr3:22143009-22144265 FORWARD
LENGTH=418
Length = 418
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 82/199 (41%), Gaps = 26/199 (13%)
Query: 127 PLSVARYDFAC-TVSDNKIYVAGGKSTLASARGISSSEVYDPDLDIWMTLPNLHTLRYKC 185
P+S AR FAC +V K+YVAGG +A + S+EVYD + D W LP + R +C
Sbjct: 191 PMSAARSFFACASVGSTKVYVAGGHDDQKNA--LRSAEVYDVEKDEWSMLPPMTEGRDEC 248
Query: 186 TGVTWQGN--VYIVGGFAEREDSDKTMPSIVERSSAEVYDTQAGRWELITGMWQL-DVPP 242
G + + ++ G+ RS E+YD W I +W D+ P
Sbjct: 249 HGFSMATDPGFCVLSGYGTETQGQF-------RSDGEIYDPITNSWSTIENVWPFPDLSP 301
Query: 243 NQIVAVNDTLFSSGDCLNAWKGHIESYDGKLWNEVEGSRKQSLLSTLEDHNIVQRLYLTM 302
A F GD +LW ++ R+ +ED ++ ++ +
Sbjct: 302 RGRTAAAAAEF-PGDFRGC----------RLWCFIDSERQSQPHWEVEDDSMKWKVIMDT 350
Query: 303 V--PIGTRLFFLAGYRVGE 319
+ P+ T AG G+
Sbjct: 351 IRLPVTTMTSVFAGSLSGQ 369
>AT1G80440.1 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr1:30241763-30242827 FORWARD
LENGTH=354
Length = 354
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 99/244 (40%), Gaps = 43/244 (17%)
Query: 42 IEIYHPSMNTWTYVSSIPGLLHDQVLKGFA-MVSLGDFIYIIGGQICHKEMVHVNDESAD 100
I + WT + IPG + L F +VS+G + ++GG + + ++ D
Sbjct: 80 ISVLESGSGLWTELPPIPG--QTKGLPLFCRLVSVGSDLIVLGG------LDPITWQAHD 131
Query: 101 FVDEGIQVVTNVLRYNVRTNQWFTCAPL-SVARYDFACTV-SDNKIYVAGGKSTLASARG 158
+V ++ T++W A + V R F C SD + VAGG + A
Sbjct: 132 ----------SVFVFSFLTSKWRVGATMPGVRRSFFGCASDSDRTVLVAGGHNEEKCA-- 179
Query: 159 ISSSEVYDPDLDIWMTLPNLHTLRYKCTGVTWQGNVYIVGGFAEREDSDKTMPSIVERSS 218
++S+ VYD D W LP++ R +C V G +++GG+A E + +
Sbjct: 180 LTSAMVYDVSEDKWTFLPDMARERDECKAVFHAGRFHVIGGYATEEQGQFS-------KT 232
Query: 219 AEVYDTQAGRWELITGMWQLDV-----PPNQIVAVNDTLFSSGDCLNAWKGHIESYDGKL 273
AE +D W +T + D PP T + GD W G + +
Sbjct: 233 AESFDVSTWEWGPLTEDFLDDTGDTVSPP--------TCVAGGDLYACWGGDVMMFLNDK 284
Query: 274 WNEV 277
W +V
Sbjct: 285 WQKV 288
>AT5G01660.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Galactose
oxidase/kelch, beta-propeller (InterPro:IPR011043),
Kelch repeat type 1 (InterPro:IPR006652),
Development/cell death domain (InterPro:IPR013989),
Kelch related (InterPro:IPR013089), Kelch-type beta
propeller (InterPro:IPR015915); BEST Arabidopsis
thaliana protein match is: DCD (Development and Cell
Death) domain protein (TAIR:AT3G11000.1); Has 16133
Blast hits to 7053 proteins in 482 species: Archae - 40;
Bacteria - 1227; Metazoa - 10756; Fungi - 311; Plants -
1896; Viruses - 673; Other Eukaryotes - 1230 (source:
NCBI BLink). | chr5:244504-248442 REVERSE LENGTH=656
Length = 656
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 90/218 (41%), Gaps = 38/218 (17%)
Query: 40 NSIEIYHPSMNTWTYVSSIPGLLHDQVLKGFAMVSLGDFIYIIGGQICHKEMVHVNDESA 99
+S++ Y PS N SS+ + + ++ L IY+ GG
Sbjct: 388 SSVQSYFPSRNVVKAHSSMSCIRSNA-----SVAKLDGKIYVFGG--------------- 427
Query: 100 DFVDEGIQVVTNVLR-YNVRTNQWFTCAPLSVARYDFACTVSDNKIYVAGGKSTLASARG 158
D+G + TN +N QW C PL+ + D KI+ GG + + S
Sbjct: 428 ---DDGGRGWTNSAESFNQTDGQWSLCPPLNERKGSLGGATLDGKIFAIGGGNGMVS--- 481
Query: 159 ISSSEVYDPDLDIWMTLPNLHTLRYKCTGVTWQGNVYIVGGFAEREDSDKTMPSIVERSS 218
S E+ DPD+ W+ ++ R+ V + ++Y VGG+ +E ++
Sbjct: 482 FSDVEMLDPDIGRWIRTRSMGQERFAVASVEHKSSIYAVGGYDGKE----------YLNT 531
Query: 219 AEVYDTQAGRWELITGMWQLDVPPNQIVAVNDTLFSSG 256
AE +D + W I M + + +V +N+ L++ G
Sbjct: 532 AERFDPREHSWMNIASM-KSRRGCHSLVVLNEKLYAIG 568
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 62/164 (37%), Gaps = 26/164 (15%)
Query: 42 IEIYHPSMNTWTYVSSIPGLLHDQVLKGFAMVSLGDFIYIIGGQICHKEMVHVNDESADF 101
+E+ P + W S+ Q A V IY +GG
Sbjct: 485 VEMLDPDIGRWIRTRSM-----GQERFAVASVEHKSSIYAVGGY---------------- 523
Query: 102 VDEGIQVVTNVLRYNVRTNQWFTCAPLSVARYDFACTVSDNKIYVAGGKSTLASARGISS 161
+G + + R++ R + W A + R + V + K+Y GG +SS
Sbjct: 524 --DGKEYLNTAERFDPREHSWMNIASMKSRRGCHSLVVLNEKLYAIGG---FDGETMVSS 578
Query: 162 SEVYDPDLDIWMTLPNLHTLRYKCTGVTWQGNVYIVGGFAERED 205
E+Y+P WMT + LR + ++Y++GG+ ED
Sbjct: 579 VEIYEPRTGTWMTGEPMKDLRGYSAVAVVKDSIYVIGGYKGEED 622
>AT2G44130.1 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr2:18253731-18254960 FORWARD
LENGTH=409
Length = 409
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 86/215 (40%), Gaps = 40/215 (18%)
Query: 42 IEIYHPSMNTWTYVS-----SIPGLLHDQVLKGFAMVSLGDFIYIIGGQICHKEMVHVND 96
+ +Y+ +M+TW V+ IP VL+ I +IGG
Sbjct: 116 LSVYNAAMSTWHRVAFPEEEQIPLFCECVVLQDAGK------ILLIGG------------ 157
Query: 97 ESADFVDEGIQVVTNVLRYNVRTNQWFTCAPLSVARYDFAC-TVSDNKIYVAGGKSTLAS 155
+ E +Q +V +W AP+ +R FAC +VS K+YVAGG +
Sbjct: 158 ----WDPETLQPTRDVYVLEFAGRKWRRGAPMKESRSFFACASVSPTKVYVAGGHDDQKN 213
Query: 156 ARGISSSEVYDPDLDIWMTLPNLHTLRYKCTG--VTWQGNVYIVGGFAEREDSDKTMPSI 213
A + S+EVYD + D W ++ + R +C G V ++ G+ T
Sbjct: 214 A--LRSAEVYDVEKDEWSSVTPMTEGRDECQGFAVGMGLRFCVLSGYG-------TESQG 264
Query: 214 VERSSAEVYDTQAGRWELITGMWQL-DVPPNQIVA 247
RS E+YD W I +W+ D P A
Sbjct: 265 RFRSDGEIYDPATDSWSRIDNVWRFPDTSPRGRTA 299
>AT2G02870.3 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr2:838378-839781 FORWARD
LENGTH=467
Length = 467
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 66/156 (42%), Gaps = 22/156 (14%)
Query: 112 VLRYNVRTNQWFTCAPLSVARYDFACTVSDNKIYVAGGKSTLASARGISSSEVYDPDLDI 171
+ RY++ TN W + ++ R F AGG + + + +E+Y+ +L
Sbjct: 229 IYRYSLLTNSWSSGMKMNSPRCLFGSASLGEIAIFAGGCDS--QGKILDFAEMYNSELQT 286
Query: 172 WMTLPNLHTLRYKCTGVTWQGNVYIVGGFAEREDSDKTMPSIVERSSAEVYDTQAGRWEL 231
W+TLP ++ R C+GV G Y++GG + T E YD + +W
Sbjct: 287 WITLPRMNKPRKMCSGVFMDGKFYVIGGIGGADSKGLTC--------GEEYDLETKKWTQ 338
Query: 232 ITGMW-------QLDVPPNQ-----IVAVNDTLFSS 255
I + Q D+ P + VN+ L+++
Sbjct: 339 IPDLSPPRSRADQADMSPAAEAPPLVAVVNNQLYAA 374
>AT2G02870.2 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr2:838378-839781 FORWARD
LENGTH=467
Length = 467
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 66/156 (42%), Gaps = 22/156 (14%)
Query: 112 VLRYNVRTNQWFTCAPLSVARYDFACTVSDNKIYVAGGKSTLASARGISSSEVYDPDLDI 171
+ RY++ TN W + ++ R F AGG + + + +E+Y+ +L
Sbjct: 229 IYRYSLLTNSWSSGMKMNSPRCLFGSASLGEIAIFAGGCDS--QGKILDFAEMYNSELQT 286
Query: 172 WMTLPNLHTLRYKCTGVTWQGNVYIVGGFAEREDSDKTMPSIVERSSAEVYDTQAGRWEL 231
W+TLP ++ R C+GV G Y++GG + T E YD + +W
Sbjct: 287 WITLPRMNKPRKMCSGVFMDGKFYVIGGIGGADSKGLTC--------GEEYDLETKKWTQ 338
Query: 232 ITGMW-------QLDVPPNQ-----IVAVNDTLFSS 255
I + Q D+ P + VN+ L+++
Sbjct: 339 IPDLSPPRSRADQADMSPAAEAPPLVAVVNNQLYAA 374
>AT2G02870.1 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr2:838378-839781 FORWARD
LENGTH=467
Length = 467
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 66/156 (42%), Gaps = 22/156 (14%)
Query: 112 VLRYNVRTNQWFTCAPLSVARYDFACTVSDNKIYVAGGKSTLASARGISSSEVYDPDLDI 171
+ RY++ TN W + ++ R F AGG + + + +E+Y+ +L
Sbjct: 229 IYRYSLLTNSWSSGMKMNSPRCLFGSASLGEIAIFAGGCDS--QGKILDFAEMYNSELQT 286
Query: 172 WMTLPNLHTLRYKCTGVTWQGNVYIVGGFAEREDSDKTMPSIVERSSAEVYDTQAGRWEL 231
W+TLP ++ R C+GV G Y++GG + T E YD + +W
Sbjct: 287 WITLPRMNKPRKMCSGVFMDGKFYVIGGIGGADSKGLTC--------GEEYDLETKKWTQ 338
Query: 232 ITGMW-------QLDVPPNQ-----IVAVNDTLFSS 255
I + Q D+ P + VN+ L+++
Sbjct: 339 IPDLSPPRSRADQADMSPAAEAPPLVAVVNNQLYAA 374
>AT1G14330.1 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr1:4890375-4891700 REVERSE
LENGTH=441
Length = 441
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 18/152 (11%)
Query: 112 VLRYNVRTNQWFTCAPLSVARYDFACTVSDNKIYVAGGKSTLASARGISSSEVYDPDLDI 171
+ RY++ TN W + ++ R F AGG + S+E+Y+ +L
Sbjct: 206 IYRYSLLTNSWSSGMRMNSPRCLFGSASLGEIAIFAGGFDSFGKIS--DSAEMYNSELQT 263
Query: 172 WMTLPNLHTLRYKCTGVTWQGNVYIVGGFAEREDSDKTMPSIVERSSAEVYDTQAGRWEL 231
W TLP ++ R C+GV G Y++GG + T E +D + +W
Sbjct: 264 WTTLPKMNKPRKMCSGVFMDGKFYVIGGIGGNDSKVLT--------CGEEFDLETKKWTE 315
Query: 232 ITGM---WQLDVP-----PNQIVAVNDTLFSS 255
I M ++P P + VN+ L+++
Sbjct: 316 IPEMSPPRSREMPAAAEAPPLVAVVNNELYAA 347
>AT3G43710.1 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr3:15605608-15606744 FORWARD
LENGTH=378
Length = 378
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 96/233 (41%), Gaps = 59/233 (25%)
Query: 57 SIPGLLHDQVLKGFAMVSLGDFIYIIGGQICHKEMVHVNDESADFVDEGIQVVTNVLRYN 116
SIP L D VL +G IY+IGG I N+ ++ V+ +
Sbjct: 116 SIPKFLPDVVL-------VGSNIYVIGGLI--------NNNASH----------KVMVMD 150
Query: 117 VRTNQWFTCAPLSVARYDFACTVSDNKIYVAGGKSTLASARGISSSEVYDPDLDIW--MT 174
R++ W VAR + V D KIYVAGG L + + EV+D + W ++
Sbjct: 151 CRSHTWREAQGTCVARVSPSACVLDGKIYVAGGCKNLDATMWM---EVFDTKTESWEFVS 207
Query: 175 LPNLHTLR--YKCTGVTWQGNVYIVGGFAEREDSDKTMPSIVERSSAEVYDTQAGRW-EL 231
P R C + + GNVY+ +S KT +Y+ GRW E
Sbjct: 208 SPGEEICRDLTSCESIGYDGNVYV--------ESMKTYG---------LYELHKGRWREG 250
Query: 232 ITGMWQLDVPPNQIVAVNDTLFSSGDCLNAWKGHIESYDG--KLWNEVEGSRK 282
M + +Q V +++ L+ S W +E YD KLWN ++G K
Sbjct: 251 QYSMSRGGSLSSQCV-IDNVLYRS------WSYMVEWYDSENKLWNSLKGLEK 296
>AT5G40680.1 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr5:16288754-16290001 FORWARD
LENGTH=415
Length = 415
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 65/168 (38%), Gaps = 24/168 (14%)
Query: 112 VLRYNVRTNQWFTCAPLSVARYDFACTVSDNKIYVAGGKSTLASARG----ISSSEVYDP 167
V RY + N+W + R +A + AGG T S G ++ +E Y+
Sbjct: 177 VWRYELEVNKWINDTEMITPRVMYASASRGTDAFFAGGIKT--SENGGPDVVNVAERYNS 234
Query: 168 DLDIWMTLPNLHTLRYKCTGVTWQGNVYIVGGFAEREDSDKTMPSIVERSSAEVYDTQAG 227
D W + +H R +G +G Y +GG R+++D V + E YD
Sbjct: 235 DTKTWKAMKAMHKRRKFSSGCFLRGKFYALGG---RDEND------VYLTCGESYDELTD 285
Query: 228 RWELITGM-----WQLDVPPNQIVAVNDTLFSSGDCLNAWKGHIESYD 270
W+LI M + P I V D L+ L W + YD
Sbjct: 286 SWKLIPDMLKGMTFMNPQSPPLIAVVKDNLY----LLETWLNELWVYD 329