Miyakogusa Predicted Gene

Lj6g3v2043200.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2043200.1 Non Chatacterized Hit- tr|I3T0X1|I3T0X1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,100,0,zf-C3HC4_3,NULL; no description,Zinc finger,
RING/FYVE/PHD-type; ZF_RING_1,Zinc finger, RING-type, c,CUFF.60569.1
         (252 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G47160.1 | Symbols:  | RING/U-box superfamily protein | chr3:...   295   2e-80
AT5G58787.1 | Symbols:  | RING/U-box superfamily protein | chr5:...   288   3e-78
AT3G47160.2 | Symbols:  | RING/U-box superfamily protein | chr3:...   286   6e-78
AT5G01520.1 | Symbols:  | RING/U-box superfamily protein | chr5:...   286   1e-77
AT5G58787.2 | Symbols:  | RING/U-box superfamily protein | chr5:...   258   3e-69
AT5G01520.2 | Symbols:  | RING/U-box superfamily protein | chr5:...   205   2e-53
AT1G24440.1 | Symbols:  | RING/U-box superfamily protein | chr1:...   196   1e-50
AT1G13195.1 | Symbols:  | RING/U-box superfamily protein | chr1:...   191   5e-49
AT1G13195.2 | Symbols:  | RING/U-box superfamily protein | chr1:...   163   1e-40

>AT3G47160.1 | Symbols:  | RING/U-box superfamily protein |
           chr3:17360238-17361879 REVERSE LENGTH=245
          Length = 245

 Score =  295 bits (756), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 135/241 (56%), Positives = 174/241 (72%), Gaps = 2/241 (0%)

Query: 14  SFKESLKLLEADIHHANTLASDFPREYDGACLQMRMSYSPAARLFLFLVQWTDCNXXXXX 73
           SFK+SLK LEADI HANT+A D+PRE DGA +QMR+SY+PAA+  LFLVQWTDC+     
Sbjct: 5   SFKDSLKALEADIQHANTVALDYPREKDGARVQMRLSYTPAAQFLLFLVQWTDCHLAGTL 64

Query: 74  XXXXXXXYKVYVDGTTTMSVHERKASIREFYGFIYPSLLQLQKGVTDTEDKKQKAVCMXX 133
                  Y  Y DG TTMSV+ERK SI++FY  I+PSLLQL++G+TD +D+KQK VC   
Sbjct: 65  GLLRVLIYMTYADGKTTMSVYERKTSIKDFYAVIFPSLLQLERGITDLDDRKQKEVCKIR 124

Query: 134 XXXXXXXXXXXXXXXXXXREEECGICMEMNSKIVLPDCNHAMCLKCYHEWRTRSQSCPFC 193
                             REEECGICMEMN+ +VLP+C H++C+KCY +W  RS+SCPFC
Sbjct: 125 YRNKDETEKVKLSEIDIEREEECGICMEMNNMVVLPNCTHSLCIKCYRDWHGRSESCPFC 184

Query: 194 RDSLESVNSGDLWVLTDSRDVVDMATVTRENIRRLFMYIDKLPLIIPDSLFDT--YDSHL 251
           RDSL+ VNSGDLW+L +  D V+M T+ REN +RLF+YI+KLPL++PD +F +  YD H+
Sbjct: 185 RDSLKRVNSGDLWMLMEKSDTVNMYTIERENKKRLFVYIEKLPLVVPDQVFASSPYDCHV 244

Query: 252 R 252
           +
Sbjct: 245 K 245


>AT5G58787.1 | Symbols:  | RING/U-box superfamily protein |
           chr5:23742733-23744324 FORWARD LENGTH=242
          Length = 242

 Score =  288 bits (736), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 142/241 (58%), Positives = 170/241 (70%), Gaps = 5/241 (2%)

Query: 14  SFKESLKLLEADIHHANTLASDFPREYDGACLQMRMSYSPAARLFLFLVQWTDCNXXXXX 73
           SFK+SLK LEADI HANTLA D+PRE DGA +QMR+SYSP A+ FLFLVQWTDC      
Sbjct: 5   SFKDSLKALEADIQHANTLALDYPREKDGARVQMRLSYSPTAQFFLFLVQWTDCKLAGFL 64

Query: 74  XXXXXXXYKVYVDGTTTMSVHERKASIREFYGFIYPSLLQLQKGVTDTEDKKQKAVCMXX 133
                  Y  Y DG TTMSV+ERKASIREF   I PSL QLQ+GVTD +D KQK VC   
Sbjct: 65  GLLRVLIYMTYADGKTTMSVYERKASIREFQAVILPSLSQLQRGVTDIDDSKQKEVC--- 121

Query: 134 XXXXXXXXXXXXXXXXXXREEECGICMEMNSKIVLPDCNHAMCLKCYHEWRTRSQSCPFC 193
                             REEECGICMEMNSK+VLP+C H++C+KCY +WR RSQSCPFC
Sbjct: 122 KMRYRKKDESEMSEIEIEREEECGICMEMNSKVVLPNCTHSLCIKCYRDWRGRSQSCPFC 181

Query: 194 RDSLESVNSGDLWVLTDSRDVVDMATVTRENIRRLFMYIDKLPLIIPDSLFDT--YDSHL 251
           RDSL+ V+SGDLW+  D  D V++  + REN +RLFMYI+KLPL++PD ++ +  YD H+
Sbjct: 182 RDSLKRVDSGDLWMFLDQNDTVNLTAIARENQKRLFMYIEKLPLVVPDQVYASSPYDFHV 241

Query: 252 R 252
           R
Sbjct: 242 R 242


>AT3G47160.2 | Symbols:  | RING/U-box superfamily protein |
           chr3:17360238-17361879 REVERSE LENGTH=257
          Length = 257

 Score =  286 bits (733), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 135/253 (53%), Positives = 174/253 (68%), Gaps = 14/253 (5%)

Query: 14  SFKESLKLLEADIHHANTLAS------------DFPREYDGACLQMRMSYSPAARLFLFL 61
           SFK+SLK LEADI HANT+ S            D+PRE DGA +QMR+SY+PAA+  LFL
Sbjct: 5   SFKDSLKALEADIQHANTVLSNELGDEVIFRALDYPREKDGARVQMRLSYTPAAQFLLFL 64

Query: 62  VQWTDCNXXXXXXXXXXXXYKVYVDGTTTMSVHERKASIREFYGFIYPSLLQLQKGVTDT 121
           VQWTDC+            Y  Y DG TTMSV+ERK SI++FY  I+PSLLQL++G+TD 
Sbjct: 65  VQWTDCHLAGTLGLLRVLIYMTYADGKTTMSVYERKTSIKDFYAVIFPSLLQLERGITDL 124

Query: 122 EDKKQKAVCMXXXXXXXXXXXXXXXXXXXXREEECGICMEMNSKIVLPDCNHAMCLKCYH 181
           +D+KQK VC                     REEECGICMEMN+ +VLP+C H++C+KCY 
Sbjct: 125 DDRKQKEVCKIRYRNKDETEKVKLSEIDIEREEECGICMEMNNMVVLPNCTHSLCIKCYR 184

Query: 182 EWRTRSQSCPFCRDSLESVNSGDLWVLTDSRDVVDMATVTRENIRRLFMYIDKLPLIIPD 241
           +W  RS+SCPFCRDSL+ VNSGDLW+L +  D V+M T+ REN +RLF+YI+KLPL++PD
Sbjct: 185 DWHGRSESCPFCRDSLKRVNSGDLWMLMEKSDTVNMYTIERENKKRLFVYIEKLPLVVPD 244

Query: 242 SLFDT--YDSHLR 252
            +F +  YD H++
Sbjct: 245 QVFASSPYDCHVK 257


>AT5G01520.1 | Symbols:  | RING/U-box superfamily protein |
           chr5:206797-208399 FORWARD LENGTH=242
          Length = 242

 Score =  286 bits (732), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 131/231 (56%), Positives = 163/231 (70%)

Query: 11  MGRSFKESLKLLEADIHHANTLASDFPREYDGACLQMRMSYSPAARLFLFLVQWTDCNXX 70
           M +SFK+SLK LEADI  ANTLAS++P EYDG  +QMR+SYSPAA LFLFL+QWTDC+  
Sbjct: 1   MRKSFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCHFA 60

Query: 71  XXXXXXXXXXYKVYVDGTTTMSVHERKASIREFYGFIYPSLLQLQKGVTDTEDKKQKAVC 130
                     YK YVDG TTMS+HERK SIREFY  ++PSLLQL  G+TD E++KQK +C
Sbjct: 61  GALGLLRILIYKAYVDGKTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQKEIC 120

Query: 131 MXXXXXXXXXXXXXXXXXXXXREEECGICMEMNSKIVLPDCNHAMCLKCYHEWRTRSQSC 190
                                REEECGIC+E+ +K+VLP CNH+MC+ CY  WR RSQSC
Sbjct: 121 DKRYRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARSQSC 180

Query: 191 PFCRDSLESVNSGDLWVLTDSRDVVDMATVTRENIRRLFMYIDKLPLIIPD 241
           PFCR SL+ VNSGDLW+ T S ++ D+  + +EN++RL +YIDKLPL+  D
Sbjct: 181 PFCRGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSD 231


>AT5G58787.2 | Symbols:  | RING/U-box superfamily protein |
           chr5:23742733-23744324 FORWARD LENGTH=227
          Length = 227

 Score =  258 bits (658), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 132/241 (54%), Positives = 159/241 (65%), Gaps = 20/241 (8%)

Query: 14  SFKESLKLLEADIHHANTLASDFPREYDGACLQMRMSYSPAARLFLFLVQWTDCNXXXXX 73
           SFK+SLK LEADI HANTLA D+PRE DGA +QMR+SYSP A+ FLFLVQWTDC      
Sbjct: 5   SFKDSLKALEADIQHANTLALDYPREKDGARVQMRLSYSPTAQFFLFLVQWTDCKLAGFL 64

Query: 74  XXXXXXXYKVYVDGTTTMSVHERKASIREFYGFIYPSLLQLQKGVTDTEDKKQKAVCMXX 133
                  Y  Y DG TTMSV+ERKASIREF                D +D KQK VC   
Sbjct: 65  GLLRVLIYMTYADGKTTMSVYERKASIREF---------------QDIDDSKQKEVC--- 106

Query: 134 XXXXXXXXXXXXXXXXXXREEECGICMEMNSKIVLPDCNHAMCLKCYHEWRTRSQSCPFC 193
                             REEECGICMEMNSK+VLP+C H++C+KCY +WR RSQSCPFC
Sbjct: 107 KMRYRKKDESEMSEIEIEREEECGICMEMNSKVVLPNCTHSLCIKCYRDWRGRSQSCPFC 166

Query: 194 RDSLESVNSGDLWVLTDSRDVVDMATVTRENIRRLFMYIDKLPLIIPDSLFDT--YDSHL 251
           RDSL+ V+SGDLW+  D  D V++  + REN +RLFMYI+KLPL++PD ++ +  YD H+
Sbjct: 167 RDSLKRVDSGDLWMFLDQNDTVNLTAIARENQKRLFMYIEKLPLVVPDQVYASSPYDFHV 226

Query: 252 R 252
           R
Sbjct: 227 R 227


>AT5G01520.2 | Symbols:  | RING/U-box superfamily protein |
           chr5:206797-208170 FORWARD LENGTH=172
          Length = 172

 Score =  205 bits (522), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 96/170 (56%), Positives = 117/170 (68%)

Query: 11  MGRSFKESLKLLEADIHHANTLASDFPREYDGACLQMRMSYSPAARLFLFLVQWTDCNXX 70
           M +SFK+SLK LEADI  ANTLAS++P EYDG  +QMR+SYSPAA LFLFL+QWTDC+  
Sbjct: 1   MRKSFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCHFA 60

Query: 71  XXXXXXXXXXYKVYVDGTTTMSVHERKASIREFYGFIYPSLLQLQKGVTDTEDKKQKAVC 130
                     YK YVDG TTMS+HERK SIREFY  ++PSLLQL  G+TD E++KQK +C
Sbjct: 61  GALGLLRILIYKAYVDGKTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQKEIC 120

Query: 131 MXXXXXXXXXXXXXXXXXXXXREEECGICMEMNSKIVLPDCNHAMCLKCY 180
                                REEECGIC+E+ +K+VLP CNH+MC+ CY
Sbjct: 121 DKRYRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCY 170


>AT1G24440.1 | Symbols:  | RING/U-box superfamily protein |
           chr1:8662340-8663777 FORWARD LENGTH=251
          Length = 251

 Score =  196 bits (498), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 107/245 (43%), Positives = 143/245 (58%), Gaps = 10/245 (4%)

Query: 14  SFKESLKLLEADIHHANTLASDFPREYDGACLQMRMSYSPAARLFLFLVQWTD--CNXXX 71
           S+++SLK+LEADI HAN LA++ P    G  LQM++  S  A  F+FL+QW D  C    
Sbjct: 9   SYRDSLKILEADIEHANGLAAEIPMGKSGVRLQMKLVCSNLAPFFIFLLQWMDFSCLLPR 68

Query: 72  XXXXXXXXXYKVYVDGTTTMSVHERKASIREFYGFIYPSLLQLQKGVTDTEDK-----KQ 126
                    YKV  DG    S + RKA+IREFYG I PSL +L     D  D+       
Sbjct: 69  YFDFFHILIYKVRADGRWNRSRYGRKATIREFYGVILPSLERLHINFADLPDESLWYPNP 128

Query: 127 KAVCMXXXXXXXXXXXXXXXXXXXXREEECGICMEMNSKIVLPDCNHAMCLKCYHEWRTR 186
           KA+                      RE+ECGIC+E  +K+VLP+C HAMC+KCY  W T+
Sbjct: 129 KAI---TKKQYDIEGSRYMNSIDLEREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTK 185

Query: 187 SQSCPFCRDSLESVNSGDLWVLTDSRDVVDMATVTRENIRRLFMYIDKLPLIIPDSLFDT 246
           S+SCPFCR S++ VNS DLWVLT   DVVD  TVT+E++ R +++I+ LP   P++ F  
Sbjct: 186 SESCPFCRGSIKRVNSEDLWVLTCDEDVVDPETVTKEDLLRFYLHINSLPKDYPEAAFLV 245

Query: 247 YDSHL 251
           Y+ +L
Sbjct: 246 YNEYL 250


>AT1G13195.1 | Symbols:  | RING/U-box superfamily protein |
           chr1:4501778-4503347 REVERSE LENGTH=260
          Length = 260

 Score =  191 bits (484), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 102/243 (41%), Positives = 136/243 (55%), Gaps = 15/243 (6%)

Query: 15  FKESLKLLEADIHHANTLASDFPREYDGACLQMRMSYSPAARLFLFLVQWTD----CNXX 70
           + ESLK+LEAD+ HAN+LA   P   +   LQM++ +S  A L LFL++W D    C   
Sbjct: 16  YYESLKVLEADVQHANSLAEAIPMGKNNVRLQMKLVHSNFASLLLFLLRWIDLSSSCLIP 75

Query: 71  XXXXXXXXXXYKVYVDGTTTMSVHERKASIREFYGFIYPSLLQLQKGVTDTE------DK 124
                     YKV  DG   ++ H RKA+I EFYG I PSL  L   + + E      D 
Sbjct: 76  RYLNLFHVLVYKVQSDGQPKLTTHGRKATISEFYGVILPSLQLLHSNLDELETTDIGFDL 135

Query: 125 KQKAVCMXXXXXXXXXXXXXXXXXXXXREEECGICMEMNSKIVLPDCNHAMCLKCYHEWR 184
           K+ +                       REEECGIC+E  +K+VLP+C H+MC+KCY  W 
Sbjct: 136 KRLS-----KKITKEARSSRFSNAGLEREEECGICLETCTKMVLPNCCHSMCIKCYRNWN 190

Query: 185 TRSQSCPFCRDSLESVNSGDLWVLTDSRDVVDMATVTRENIRRLFMYIDKLPLIIPDSLF 244
            +SQSCPFCR S++ VNS DLWVL    DVVD  T +RE++ R ++YI+ LP   P++LF
Sbjct: 191 LKSQSCPFCRGSMKRVNSEDLWVLAGDNDVVDTRTASREDLFRFYLYINSLPKDYPEALF 250

Query: 245 DTY 247
             Y
Sbjct: 251 VVY 253


>AT1G13195.2 | Symbols:  | RING/U-box superfamily protein |
           chr1:4501778-4502855 REVERSE LENGTH=222
          Length = 222

 Score =  163 bits (413), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 88/213 (41%), Positives = 117/213 (54%), Gaps = 15/213 (7%)

Query: 45  LQMRMSYSPAARLFLFLVQWTD----CNXXXXXXXXXXXXYKVYVDGTTTMSVHERKASI 100
           LQM++ +S  A L LFL++W D    C             YKV  DG   ++ H RKA+I
Sbjct: 8   LQMKLVHSNFASLLLFLLRWIDLSSSCLIPRYLNLFHVLVYKVQSDGQPKLTTHGRKATI 67

Query: 101 REFYGFIYPSLLQLQKGVTDTE------DKKQKAVCMXXXXXXXXXXXXXXXXXXXXREE 154
            EFYG I PSL  L   + + E      D K+ +                       REE
Sbjct: 68  SEFYGVILPSLQLLHSNLDELETTDIGFDLKRLS-----KKITKEARSSRFSNAGLEREE 122

Query: 155 ECGICMEMNSKIVLPDCNHAMCLKCYHEWRTRSQSCPFCRDSLESVNSGDLWVLTDSRDV 214
           ECGIC+E  +K+VLP+C H+MC+KCY  W  +SQSCPFCR S++ VNS DLWVL    DV
Sbjct: 123 ECGICLETCTKMVLPNCCHSMCIKCYRNWNLKSQSCPFCRGSMKRVNSEDLWVLAGDNDV 182

Query: 215 VDMATVTRENIRRLFMYIDKLPLIIPDSLFDTY 247
           VD  T +RE++ R ++YI+ LP   P++LF  Y
Sbjct: 183 VDTRTASREDLFRFYLYINSLPKDYPEALFVVY 215