Miyakogusa Predicted Gene

Lj6g3v2043190.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2043190.1 Non Chatacterized Hit- tr|I3SQJ0|I3SQJ0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.08,0,seg,NULL;
SPHINGOLIPID DELTA 4 DESATURASE/C-4 HYDROXYLASE PROTEIN DES2,NULL;
FA_desaturase,Fatty aci,CUFF.60568.1
         (327 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G04930.1 | Symbols: DES-1-LIKE | fatty acid desaturase family...   549   e-157

>AT4G04930.1 | Symbols: DES-1-LIKE | fatty acid desaturase family
           protein | chr4:2509236-2510918 FORWARD LENGTH=332
          Length = 332

 Score =  549 bits (1415), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 260/314 (82%), Positives = 285/314 (90%)

Query: 14  VMAGDFFWSYTDEPHASRRRQILSKYPQIKQLFGPDHSAFFKISGVVLLQLGTATLLQDA 73
           VMA DFFWSYTDEPHASRRRQILS YPQI+QLFGPD  AF KI+ VV+LQL TA +L ++
Sbjct: 19  VMATDFFWSYTDEPHASRRRQILSCYPQIRQLFGPDPWAFLKITLVVILQLSTAAILHNS 78

Query: 74  GWLKILLVAYFFGSFLNHNLFLAIHELSHNLAFSTPALNRWLGIFANLPIGVPMSVTFQK 133
           GWLKIL +AYFFGSFLNHNLFLAIHELSHNLAFSTP  NR LGIFANLPIGVPMSVTFQK
Sbjct: 79  GWLKILSIAYFFGSFLNHNLFLAIHELSHNLAFSTPVYNRCLGIFANLPIGVPMSVTFQK 138

Query: 134 YHLEHHRFQGVDGIDMDIPSLAEAHVVTNVFAKTIWVFLQLFFYAFRPLFLKPKPPGIWE 193
           YHLEHHRFQGVDGIDMD+P+  EAH+VTN+FAKTIWVFLQLFFYA RP+F+KPKPPG WE
Sbjct: 139 YHLEHHRFQGVDGIDMDVPTYTEAHLVTNIFAKTIWVFLQLFFYALRPIFIKPKPPGYWE 198

Query: 194 FINFSVQIALDVAMVYFWGWKSLAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYY 253
           FINF +QI LDV++V F+GW+S AYLILSTFVGGGMHPMAGHFISEHYVFNP+QETYSYY
Sbjct: 199 FINFLIQIVLDVSVVLFFGWRSFAYLILSTFVGGGMHPMAGHFISEHYVFNPNQETYSYY 258

Query: 254 GPLNLVTWHVGYHNEHHDFPRIPGNKLHKVKEIAPEYYDELASYKSWSQVIYMYLMDRTV 313
           GPLNL+TW VGYHNEHHDFPRIPGNKLH VKEIA EYY+ L SYKSWSQVIYMY+MD TV
Sbjct: 259 GPLNLLTWSVGYHNEHHDFPRIPGNKLHLVKEIAGEYYEGLESYKSWSQVIYMYIMDTTV 318

Query: 314 GPFSRMKRKPGKTE 327
           GP+SRMKRK  K++
Sbjct: 319 GPYSRMKRKLSKSD 332