Miyakogusa Predicted Gene

Lj6g3v2017430.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2017430.1 Non Chatacterized Hit- tr|F4Q159|F4Q159_DICFS
Putative uncharacterized protein OS=Dictyostelium fasc,24.74,0.63,no
description,NULL; SUBFAMILY NOT NAMED,NULL; SERINE
PROTEASE-RELATED,NULL; Trypsin_2,NULL; Trypsin,CUFF.61056.1
         (188 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G28320.1 | Symbols: DEG15 | protease-related | chr1:9920673-9...   181   3e-46

>AT1G28320.1 | Symbols: DEG15 | protease-related |
           chr1:9920673-9924347 REVERSE LENGTH=709
          Length = 709

 Score =  181 bits (458), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 94/179 (52%), Positives = 115/179 (64%), Gaps = 6/179 (3%)

Query: 1   MASVCLVTIGDGVWASGILLNSQGLVLTNAHLLEPWRFGKTHVSGGGNGTNSKTLPFMLE 60
           M SVCL+T+ DGVWASGI+LN  GL+LTNAHLLEPWR+GK    GG  G   K      E
Sbjct: 362 MESVCLITVNDGVWASGIILNEHGLILTNAHLLEPWRYGK----GGVYGEGFKPYVLGAE 417

Query: 61  GTTSLGNKIESDQISQTLHSKVPV-HYPFAADEHGGYKLNPSYDNHRNIRIRLDHIKPWV 119
             +S G+K   +Q SQTL  K P  HY    +    YK N     HR+IR+RL H+  W 
Sbjct: 418 EFSSTGSKFW-EQKSQTLPRKAPRNHYSSVGENIREYKHNFLQTGHRDIRVRLCHLDSWT 476

Query: 120 WCDAKVVYICKGPWDVALLQIESIPDNLVPMVMNFSRPSTGSKAYVIGHGLFGPKCGMS 178
           WC A VVYICK   D+ALLQ+E +P  L P+  NFS P  G+ A+V+GHGLFGP+CG+S
Sbjct: 477 WCPANVVYICKEQLDIALLQLEYVPGKLQPITANFSSPPLGTTAHVVGHGLFGPRCGLS 535