Miyakogusa Predicted Gene

Lj6g3v2017410.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2017410.1 Non Chatacterized Hit- tr|B4FQ41|B4FQ41_MAIZE
Uncharacterized protein OS=Zea mays PE=4
SV=1,58.88,3e-19,Auxin_repressed,Dormancyauxin associated;
seg,NULL,CUFF.61054.1
         (113 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G28330.1 | Symbols: DRM1, DYL1 | dormancy-associated protein-...   133   3e-32
AT1G28330.4 | Symbols:  | dormancy-associated protein-like 1 | c...   130   1e-31
AT1G28330.2 | Symbols: DYL1 | dormancy-associated protein-like 1...   114   9e-27
AT1G28330.3 | Symbols: DYL1 | dormancy-associated protein-like 1...   114   9e-27
AT1G28330.5 | Symbols: DYL1 | dormancy-associated protein-like 1...   114   1e-26
AT5G44300.1 | Symbols:  | Dormancy/auxin associated family prote...   108   6e-25
AT2G33830.2 | Symbols:  | Dormancy/auxin associated family prote...   105   4e-24
AT2G33830.1 | Symbols:  | Dormancy/auxin associated family prote...   105   6e-24

>AT1G28330.1 | Symbols: DRM1, DYL1 | dormancy-associated
           protein-like 1 | chr1:9934252-9935216 REVERSE LENGTH=122
          Length = 122

 Score =  133 bits (334), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 71/122 (58%), Positives = 87/122 (71%), Gaps = 9/122 (7%)

Query: 1   MVLLEKLWDDVVAGPQPERGLGALRKLTT---NIKDEGEGSK----LQRNLSMXXXXXX- 52
           MVLLEKLWDDVVAGPQP+RGLG LRK+TT   NI+D GEGS     + R+L+M       
Sbjct: 1   MVLLEKLWDDVVAGPQPDRGLGRLRKITTQPINIRDIGEGSSSKVVMHRSLTMPAAVSPG 60

Query: 53  XXXXXXXXSGRKADNVWRSVFHPGSNSATKTIGGQMFDKPL-PNTPTVYDWLYSGETRSK 111
                   +  + DNVWRSVF+PGSN AT+ IG  +FDKP  PN+P+VYDWLYSG++RS+
Sbjct: 61  TPTTPTTPTTPRKDNVWRSVFNPGSNLATRAIGSNIFDKPTHPNSPSVYDWLYSGDSRSQ 120

Query: 112 HR 113
           HR
Sbjct: 121 HR 122


>AT1G28330.4 | Symbols:  | dormancy-associated protein-like 1 |
           chr1:9934134-9935216 REVERSE LENGTH=125
          Length = 125

 Score =  130 bits (328), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 70/122 (57%), Positives = 87/122 (71%), Gaps = 9/122 (7%)

Query: 1   MVLLEKLWDDVVAGPQPERGLGALRKLTT---NIKDEGEGSK----LQRNLSMXXXXXX- 52
           MVLLEKLWDDVVAGPQP+RGLG LRK+TT   NI+D GEGS     + R+L+M       
Sbjct: 1   MVLLEKLWDDVVAGPQPDRGLGRLRKITTQPINIRDIGEGSSSKVVMHRSLTMPAAVSPG 60

Query: 53  XXXXXXXXSGRKADNVWRSVFHPGSNSATKTIGGQMFDKPL-PNTPTVYDWLYSGETRSK 111
                   +  + DNVWRSVF+PGSN AT+ IG  +FDKP  PN+P+VYDWLYSG++RS+
Sbjct: 61  TPTTPTTPTTPRKDNVWRSVFNPGSNLATRAIGSNIFDKPTHPNSPSVYDWLYSGDSRSQ 120

Query: 112 HR 113
           H+
Sbjct: 121 HQ 122


>AT1G28330.2 | Symbols: DYL1 | dormancy-associated protein-like 1 |
           chr1:9934500-9935216 REVERSE LENGTH=132
          Length = 132

 Score =  114 bits (286), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 64/121 (52%), Positives = 80/121 (66%), Gaps = 9/121 (7%)

Query: 1   MVLLEKLWDDVVAGPQPERGLGALRKLTT---NIKDEGEGSK----LQRNLSMXXXXXX- 52
           MVLLEKLWDDVVAGPQP+RGLG LRK+TT   NI+D GEGS     + R+L+M       
Sbjct: 1   MVLLEKLWDDVVAGPQPDRGLGRLRKITTQPINIRDIGEGSSSKVVMHRSLTMPAAVSPG 60

Query: 53  XXXXXXXXSGRKADNVWRSVFHPGSNSATKTIGGQMFDKPL-PNTPTVYDWLYSGETRSK 111
                   +  + DNVWRSVF+PGSN AT+ IG  +FDKP  PN+P+VYD + +   R +
Sbjct: 61  TPTTPTTPTTPRKDNVWRSVFNPGSNLATRAIGSNIFDKPTHPNSPSVYDCVDNEAQRKE 120

Query: 112 H 112
           H
Sbjct: 121 H 121


>AT1G28330.3 | Symbols: DYL1 | dormancy-associated protein-like 1 |
           chr1:9934500-9935216 REVERSE LENGTH=132
          Length = 132

 Score =  114 bits (286), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 64/121 (52%), Positives = 80/121 (66%), Gaps = 9/121 (7%)

Query: 1   MVLLEKLWDDVVAGPQPERGLGALRKLTT---NIKDEGEGSK----LQRNLSMXXXXXX- 52
           MVLLEKLWDDVVAGPQP+RGLG LRK+TT   NI+D GEGS     + R+L+M       
Sbjct: 1   MVLLEKLWDDVVAGPQPDRGLGRLRKITTQPINIRDIGEGSSSKVVMHRSLTMPAAVSPG 60

Query: 53  XXXXXXXXSGRKADNVWRSVFHPGSNSATKTIGGQMFDKPL-PNTPTVYDWLYSGETRSK 111
                   +  + DNVWRSVF+PGSN AT+ IG  +FDKP  PN+P+VYD + +   R +
Sbjct: 61  TPTTPTTPTTPRKDNVWRSVFNPGSNLATRAIGSNIFDKPTHPNSPSVYDCVDNEAQRKE 120

Query: 112 H 112
           H
Sbjct: 121 H 121


>AT1G28330.5 | Symbols: DYL1 | dormancy-associated protein-like 1 |
           chr1:9934252-9935216 REVERSE LENGTH=159
          Length = 159

 Score =  114 bits (286), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/121 (52%), Positives = 80/121 (66%), Gaps = 9/121 (7%)

Query: 1   MVLLEKLWDDVVAGPQPERGLGALRKLTT---NIKDEGEGSK----LQRNLSM-XXXXXX 52
           MVLLEKLWDDVVAGPQP+RGLG LRK+TT   NI+D GEGS     + R+L+M       
Sbjct: 1   MVLLEKLWDDVVAGPQPDRGLGRLRKITTQPINIRDIGEGSSSKVVMHRSLTMPAAVSPG 60

Query: 53  XXXXXXXXSGRKADNVWRSVFHPGSNSATKTIGGQMFDKPL-PNTPTVYDWLYSGETRSK 111
                   +  + DNVWRSVF+PGSN AT+ IG  +FDKP  PN+P+VYD + +   R +
Sbjct: 61  TPTTPTTPTTPRKDNVWRSVFNPGSNLATRAIGSNIFDKPTHPNSPSVYDCVDNEAQRKE 120

Query: 112 H 112
           H
Sbjct: 121 H 121


>AT5G44300.1 | Symbols:  | Dormancy/auxin associated family protein
           | chr5:17845371-17846179 REVERSE LENGTH=114
          Length = 114

 Score =  108 bits (270), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 61/118 (51%), Positives = 77/118 (65%), Gaps = 9/118 (7%)

Query: 1   MVLLEKLWDDVVAGPQPERG-LGALRKLTTNI---KDEGEGSKLQRNLSMXXXXXXXXXX 56
           M +LE LWDDVVAGP+PE G  G LR+++T++    +  EG  +  ++S+          
Sbjct: 1   MGVLENLWDDVVAGPRPEAGGRGHLRRISTSLTSLNNTTEGMSVAGSVSLPASPATPVTP 60

Query: 57  XXXXSGRKADNVWRSVFHPGSNSATKTIGGQMFDKPL-PNTPTVYDWLYSGETRSKHR 113
               SGRK D VWRSVFHP SN  T+ IG  +FDKP  PN+PTVYDW+YS ETRSKHR
Sbjct: 61  G---SGRKVD-VWRSVFHPASNVTTREIGANVFDKPSHPNSPTVYDWMYSNETRSKHR 114


>AT2G33830.2 | Symbols:  | Dormancy/auxin associated family protein
           | chr2:14309768-14310286 REVERSE LENGTH=108
          Length = 108

 Score =  105 bits (263), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 61/112 (54%), Positives = 75/112 (66%), Gaps = 9/112 (8%)

Query: 7   LWDDVVAGPQPERGLGALR-KLTT---NIKDEGEGSKLQRNLSMXXXXXXXXXXXXXXSG 62
           +WD+ VAGP+PE GLG LR K+TT   +IK  GEGS  +   ++              S 
Sbjct: 1   MWDETVAGPKPEHGLGRLRNKITTQPLDIKGVGEGSSSK---TVAAVAGSPGTPTTPGSA 57

Query: 63  RKADNVWRSVFHPGSNSATKTIGGQMFDKP-LPNTPTVYDWLYSGETRSKHR 113
           RK +NVWRSVFHPGSN AT+ +G  +FDKP  PN+PTVYDWLYS +TRSKHR
Sbjct: 58  RK-ENVWRSVFHPGSNIATRGMGTNLFDKPSHPNSPTVYDWLYSDDTRSKHR 108


>AT2G33830.1 | Symbols:  | Dormancy/auxin associated family protein
           | chr2:14309768-14310286 REVERSE LENGTH=106
          Length = 106

 Score =  105 bits (262), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 61/112 (54%), Positives = 74/112 (66%), Gaps = 11/112 (9%)

Query: 7   LWDDVVAGPQPERGLGALR-KLTT---NIKDEGEGSKLQRNLSMXXXXXXXXXXXXXXSG 62
           +WD+ VAGP+PE GLG LR K+TT   +IK EG  SK     ++              S 
Sbjct: 1   MWDETVAGPKPEHGLGRLRNKITTQPLDIKGEGSSSK-----TVAAVAGSPGTPTTPGSA 55

Query: 63  RKADNVWRSVFHPGSNSATKTIGGQMFDKP-LPNTPTVYDWLYSGETRSKHR 113
           RK +NVWRSVFHPGSN AT+ +G  +FDKP  PN+PTVYDWLYS +TRSKHR
Sbjct: 56  RK-ENVWRSVFHPGSNIATRGMGTNLFDKPSHPNSPTVYDWLYSDDTRSKHR 106