Miyakogusa Predicted Gene

Lj6g3v2007290.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2007290.1 tr|B9N3I2|B9N3I2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_784299 PE=4
SV=1,46.81,0.0000000000001,HSP20,Alpha crystallin/Hsp20 domain;
ZF_C3H1,Zinc finger, CCCH-type; coiled-coil,NULL; seg,NULL;
zf-,CUFF.60522.1
         (859 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G33835.1 | Symbols: FES1 | Zinc finger C-x8-C-x5-C-x3-H type ...   124   3e-28
AT3G26850.2 | Symbols:  | histone-lysine N-methyltransferases | ...    84   6e-16
AT3G26850.1 | Symbols:  | histone-lysine N-methyltransferases | ...    84   6e-16
AT3G18640.1 | Symbols:  | Zinc finger C-x8-C-x5-C-x3-H type fami...    79   1e-14

>AT2G33835.1 | Symbols: FES1 | Zinc finger C-x8-C-x5-C-x3-H type
           family protein | chr2:14312145-14314566 REVERSE
           LENGTH=587
          Length = 587

 Score =  124 bits (311), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/281 (33%), Positives = 139/281 (49%), Gaps = 44/281 (15%)

Query: 595 DWEPSVPFQPSFFITSMNASIPRDLYGPVRDRIEIPNIGDGSLKATILTE----KPASSQ 650
           DWEPS PF+ SF I          LY P  D   I N+GD  L  ++ ++    + +S Q
Sbjct: 333 DWEPSEPFKASFTIPPYILPSSDALYDPFTD---IENLGDRPLNDSLSSKGEHARKSSCQ 389

Query: 651 VRTYAAVVGKHMSDL-NEDKSSVSSHNRFYEN-----------EPNKSCVPREKDFLATE 698
            +   +  G    D  N+DKSS  S N+  E            E   + V  + D     
Sbjct: 390 QKDGDSASGPQARDCKNDDKSSSCSQNQHQETVARSLEAHGVVEGVATSVVDQNDTATPS 449

Query: 699 TEITSGTYENYQNGKIGMGQHTFGVKDVMEPEKEWAEHDTRHHGEGSSHKKRRVEMDKKI 758
            EI+S T    +               V+    + A HD+ H  +GSS+KK      KK 
Sbjct: 450 KEISSATAAENR---------------VVLKRIKPAGHDSWHRSDGSSYKK-----TKKS 489

Query: 759 HEMDVDFQANGSMQKETREVRYFRAALVDLVKELLKPSWHEGRLSKDSHNLIVKKSVDKV 818
            E+D + +++  M    + +R FR A+V+ +KE+LKP W EGRL+KD HN+IVKK+ +KV
Sbjct: 490 DEIDGEVRSDAGM----KVMRLFRTAVVETIKEMLKPLWREGRLTKDVHNMIVKKAAEKV 545

Query: 819 I-STLEPHQIPTSVDTAKNYVTSCRGKIAKLVMGYVTKYGK 858
           + + ++ HQ+PT  ++   Y+     +I KLV GYV KYGK
Sbjct: 546 VGAAVQFHQVPTDTESVDQYLGLSGTRIVKLVEGYVEKYGK 586


>AT3G26850.2 | Symbols:  | histone-lysine N-methyltransferases |
           chr3:9896541-9897415 REVERSE LENGTH=265
          Length = 265

 Score = 83.6 bits (205), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 43/110 (39%), Positives = 67/110 (60%), Gaps = 3/110 (2%)

Query: 753 EMDKKIHEMDVDFQANGSMQKE---TREVRYFRAALVDLVKELLKPSWHEGRLSKDSHNL 809
           +++  +HE D   + +    KE   +R ++ F+  L   VK+LLKPSW +G +SK++   
Sbjct: 156 KVENNVHEGDNTRKKSREKSKERDSSRSMKLFKVVLTKFVKDLLKPSWRQGNMSKEAFKT 215

Query: 810 IVKKSVDKVISTLEPHQIPTSVDTAKNYVTSCRGKIAKLVMGYVTKYGKS 859
           IVK+ VDKV +++E  +IP S      Y+ S + K+ KLVMGYV KY K+
Sbjct: 216 IVKRVVDKVSNSMEGRRIPKSRAKIDKYIDSSQQKLTKLVMGYVDKYVKA 265


>AT3G26850.1 | Symbols:  | histone-lysine N-methyltransferases |
           chr3:9896541-9897415 REVERSE LENGTH=265
          Length = 265

 Score = 83.6 bits (205), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 43/110 (39%), Positives = 67/110 (60%), Gaps = 3/110 (2%)

Query: 753 EMDKKIHEMDVDFQANGSMQKE---TREVRYFRAALVDLVKELLKPSWHEGRLSKDSHNL 809
           +++  +HE D   + +    KE   +R ++ F+  L   VK+LLKPSW +G +SK++   
Sbjct: 156 KVENNVHEGDNTRKKSREKSKERDSSRSMKLFKVVLTKFVKDLLKPSWRQGNMSKEAFKT 215

Query: 810 IVKKSVDKVISTLEPHQIPTSVDTAKNYVTSCRGKIAKLVMGYVTKYGKS 859
           IVK+ VDKV +++E  +IP S      Y+ S + K+ KLVMGYV KY K+
Sbjct: 216 IVKRVVDKVSNSMEGRRIPKSRAKIDKYIDSSQQKLTKLVMGYVDKYVKA 265


>AT3G18640.1 | Symbols:  | Zinc finger C-x8-C-x5-C-x3-H type family
           protein | chr3:6413617-6415829 REVERSE LENGTH=676
          Length = 676

 Score = 79.3 bits (194), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 36/88 (40%), Positives = 60/88 (68%)

Query: 772 QKETREVRYFRAALVDLVKELLKPSWHEGRLSKDSHNLIVKKSVDKVISTLEPHQIPTSV 831
           +K+ + +R F+ ALV++VKELLKP+W EG+L+KD +  IVKK  +KV  T++   +P + 
Sbjct: 589 EKDPKGMRAFKFALVEVVKELLKPAWKEGKLNKDGYKNIVKKVAEKVTGTMQSGNVPQTQ 648

Query: 832 DTAKNYVTSCRGKIAKLVMGYVTKYGKS 859
           +   +Y+++ + K+ KLV  YV K  K+
Sbjct: 649 EKIDHYLSASKPKLTKLVQAYVGKIKKT 676