Miyakogusa Predicted Gene
- Lj6g3v2006660.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v2006660.1 tr|D7MG39|D7MG39_ARALL EMB1025 OS=Arabidopsis
lyrata subsp. lyrata GN=ARALYDRAFT_492862 PE=4
SV=1,30.56,2e-18,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; PPR: pentatricopeptide repeat domain,P,CUFF.60482.1
(479 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 638 0.0
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 248 5e-66
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 8e-60
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 2e-58
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 221 6e-58
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 7e-58
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 221 1e-57
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 218 9e-57
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 216 2e-56
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 3e-56
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 9e-55
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 5e-54
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 207 1e-53
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 207 1e-53
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 5e-52
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 200 2e-51
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 199 4e-51
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 1e-50
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 2e-50
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 196 2e-50
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 3e-50
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 3e-50
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 4e-50
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 195 6e-50
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 8e-50
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 194 1e-49
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 2e-49
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 2e-49
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 193 3e-49
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 192 4e-49
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 1e-48
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 1e-48
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 190 2e-48
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 2e-48
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 189 3e-48
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 189 4e-48
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 189 5e-48
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 188 9e-48
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 1e-47
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 1e-47
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 1e-47
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 187 1e-47
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 2e-47
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 2e-47
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 2e-47
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 3e-47
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 3e-47
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 3e-47
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 3e-47
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 3e-47
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 185 6e-47
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 6e-47
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 9e-47
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 2e-46
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 3e-46
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 4e-46
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 1e-45
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 3e-45
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 178 9e-45
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 2e-44
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 4e-44
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 4e-44
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 5e-44
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 7e-44
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 7e-44
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 1e-43
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 1e-43
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 5e-43
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 1e-42
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 2e-42
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 169 3e-42
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 5e-42
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 5e-42
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 168 7e-42
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 167 1e-41
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 1e-41
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 166 2e-41
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 1e-40
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 2e-40
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 3e-40
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 162 5e-40
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 161 8e-40
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 2e-39
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 159 3e-39
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 158 7e-39
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 158 9e-39
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 158 1e-38
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 3e-38
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 3e-38
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 3e-38
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 8e-38
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 2e-37
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 2e-37
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 153 3e-37
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 3e-37
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 3e-37
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 4e-37
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 5e-37
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 6e-37
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 7e-37
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 3e-36
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 149 4e-36
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 4e-36
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 149 6e-36
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 9e-36
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 148 1e-35
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 3e-35
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 146 3e-35
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 5e-35
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 5e-35
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 7e-35
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 8e-35
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 9e-35
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 143 3e-34
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 4e-34
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 5e-34
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 5e-34
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 140 2e-33
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 3e-33
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 138 8e-33
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 8e-33
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 1e-32
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 2e-32
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 3e-32
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 136 4e-32
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 135 8e-32
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 134 1e-31
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 1e-31
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 3e-31
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 3e-31
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 133 3e-31
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 5e-31
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 4e-30
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 4e-30
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 6e-30
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 126 3e-29
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 126 3e-29
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 3e-29
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 125 6e-29
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 6e-29
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 6e-28
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 6e-28
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 6e-28
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 7e-28
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 9e-28
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 120 2e-27
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 3e-27
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 6e-27
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 118 7e-27
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 116 3e-26
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 4e-26
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 4e-26
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 113 2e-25
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 3e-25
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 5e-25
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 7e-24
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 7e-24
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 1e-23
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 2e-23
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 107 3e-23
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 4e-23
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 5e-23
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 7e-23
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 8e-23
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 9e-23
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 7e-22
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 9e-22
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 5e-21
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 98 2e-20
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 1e-19
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 2e-19
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 6e-19
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 6e-19
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 3e-18
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 90 4e-18
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 88 2e-17
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 87 3e-17
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 5e-17
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 84 3e-16
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 84 3e-16
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 84 3e-16
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 3e-16
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 4e-16
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 83 5e-16
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 82 6e-16
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 82 7e-16
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 8e-16
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 82 8e-16
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 82 9e-16
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 82 1e-15
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 81 1e-15
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 78 1e-14
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 78 2e-14
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 3e-14
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 3e-14
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 3e-14
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 77 4e-14
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 76 5e-14
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 5e-14
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 76 6e-14
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 76 7e-14
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 75 8e-14
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 75 9e-14
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 75 1e-13
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 75 1e-13
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 73 3e-13
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 73 4e-13
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 73 5e-13
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 72 7e-13
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 72 1e-12
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 72 1e-12
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 71 2e-12
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 3e-12
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 69 5e-12
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 6e-12
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 68 1e-11
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 1e-11
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 2e-11
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-11
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 67 4e-11
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 4e-11
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 2e-10
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 64 2e-10
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 64 3e-10
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 5e-10
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 62 9e-10
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 62 1e-09
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 1e-09
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 61 2e-09
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 59 9e-09
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 58 1e-08
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 58 2e-08
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 57 2e-08
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 5e-08
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 56 5e-08
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT3G46870.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 55 1e-07
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G04260.1 | Symbols: PTAC3 | plastid transcriptionally active ... 54 2e-07
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 54 3e-07
AT5G14350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 50 3e-06
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 50 3e-06
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 50 3e-06
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-06
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 638 bits (1645), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 290/460 (63%), Positives = 376/460 (81%), Gaps = 2/460 (0%)
Query: 1 MGSRTL-FKWPKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISR 59
MGS+ + FKW K IT S V +L++AEKD+ K++ +FDSATAEY+NG+ HD ++FG M+ R
Sbjct: 1 MGSKVMMFKWSKNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLR 60
Query: 60 LVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFT 119
LV+AN+F++AE L+ RMK ENCVV+EDILL+ICRGYGRVHRP D++RVFHKM+DF +
Sbjct: 61 LVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPS 120
Query: 120 QKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIF 179
QK+Y+TV+ ILVEEN + A FY+ MR++G+PP+V SLN+LIKALC+N T+D+ L+IF
Sbjct: 121 QKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIF 180
Query: 180 HEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQS 239
EMP RGC PDSYTYGTLI+GLCR G + EAK+LF EM EK +P+VVTYTSLI+G+C S
Sbjct: 181 LEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGS 240
Query: 240 DNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTY 299
N+ EA+R LEEMK GIEPNVFTYS+LMDGLCK G SLQAMEL EMM+ + RPNMVTY
Sbjct: 241 KNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTY 300
Query: 300 GTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVL 359
TLI GLCKE K EAVE+LDRM LQGLKP+AGLYGK+ISGFCA S +++AANF+DEM+L
Sbjct: 301 TTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMIL 360
Query: 360 GGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFC 419
GGI+P+R TW++HV+ N VV+GLC+N S RAF LYLSMR+RGIS+E++T + L+KC C
Sbjct: 361 GGITPNRLTWNIHVKTSNEVVRGLCANYPS-RAFTLYLSMRSRGISVEVETLESLVKCLC 419
Query: 420 KRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
K+G+ KA ++++E+++DGC+P KG W +++G D+ V
Sbjct: 420 KKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIV 459
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 134/266 (50%), Gaps = 8/266 (3%)
Query: 196 TLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKN 255
++ G R+ ++ +F++M++ PS Y +++ + + + L A + + M++
Sbjct: 91 SICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREI 150
Query: 256 GIEPNVFTYSTLMDGLCKGGHSLQA-MELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSE 314
G+ P V + + L+ LC+ ++ A +++ M + P+ TYGTLI+GLC+ G+ E
Sbjct: 151 GLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDE 210
Query: 315 AVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVR 374
A ++ M + P Y +I+G C + + +A +++EM GI P+ T+S
Sbjct: 211 AKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYS---- 266
Query: 375 MHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEM 434
+++ GLC + S +A +L+ M RG + T+ LI CK + +A +L+ M
Sbjct: 267 ---SLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRM 323
Query: 435 ISDGCVPDKGIWDVVMGGLWDRKKVR 460
G PD G++ V+ G K R
Sbjct: 324 NLQGLKPDAGLYGKVISGFCAISKFR 349
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 85/210 (40%), Gaps = 9/210 (4%)
Query: 43 SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPL 102
S G + T+ ++ L + A L E M C T+ G + +
Sbjct: 255 SKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQ 314
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNI-- 160
+A+ + +M LK Y VI + + A F EM GI P+ ++ NI
Sbjct: 315 EAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHV 374
Query: 161 -----LIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFN 215
+++ LC N + A ++ M +RG + T +L+ LC+ G +A +L +
Sbjct: 375 KTSNEVVRGLCANYPS--RAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVD 432
Query: 216 EMEEKGFSPSVVTYTSLIHGMCQSDNLGEA 245
E+ G PS T+ LI +GEA
Sbjct: 433 EIVTDGCIPSKGTWKLLIGHTLDKTIVGEA 462
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 248 bits (634), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 152/432 (35%), Positives = 232/432 (53%), Gaps = 15/432 (3%)
Query: 34 MFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICR 93
MF SA S F+ +T MI + F S E LL R++ EN V+ E + + R
Sbjct: 63 MFKSAPKMGS--FKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFR 120
Query: 94 GYGRVHRPLDAIRVFHKMED-FQLKFTQKSYLTVIDILVEENHVKRAIAFYREM----RK 148
YG+ H P A+ +FH+M D F+ K + KS+ +V+++++ E R + FY +
Sbjct: 121 AYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMN 180
Query: 149 MGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVS 208
M I P+ +S N++IKALCK + +D A+++F MP R C PD YTY TL++GLC+ +
Sbjct: 181 MNISPNGLSFNLVIKALCKLR-FVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERID 239
Query: 209 EAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLM 268
EA L +EM+ +G SPS V Y LI G+C+ +L +L++ M G PN TY+TL+
Sbjct: 240 EAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLI 299
Query: 269 DGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLK 328
GLC G +A+ LLE MV+ PN VTYGTLINGL K+ + ++AV +L M +G
Sbjct: 300 HGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYH 359
Query: 329 PNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVD 388
N +Y +ISG ++A + +M G P+ +S+ +V GLC
Sbjct: 360 LNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSV-------LVDGLCREGK 412
Query: 389 SPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDV 448
A ++ M G T+ L+K F K G +A ++ +EM GC +K + V
Sbjct: 413 PNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSV 472
Query: 449 VMGGLWDRKKVR 460
++ GL +V+
Sbjct: 473 LIDGLCGVGRVK 484
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 171/376 (45%), Gaps = 44/376 (11%)
Query: 104 AIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIK 163
AI VF M + + +Y T++D L +E + A+ EM+ G PS V N+LI
Sbjct: 206 AIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLID 265
Query: 164 ALCKN----------------------------------KETIDSALQIFHEMPNRGCQP 189
LCK K +D A+ + M + C P
Sbjct: 266 GLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIP 325
Query: 190 DSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLL 249
+ TYGTLINGL + ++A L + MEE+G+ + Y+ LI G+ + EA+ L
Sbjct: 326 NDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLW 385
Query: 250 EEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKE 309
+M + G +PN+ YS L+DGLC+ G +A E+L M+ PN TY +L+ G K
Sbjct: 386 RKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKT 445
Query: 310 GKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATW 369
G EAV++ M G N Y +I G C ++A +M+ GI P +
Sbjct: 446 GLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAY 505
Query: 370 SLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTR---GISIEIDTFDCLIKCFCKRGDLNK 426
S ++++GLC A +LY M + ++ T++ L+ C + D+++
Sbjct: 506 S-------SIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISR 558
Query: 427 AARILEEMISDGCVPD 442
A +L M+ GC PD
Sbjct: 559 AVDLLNSMLDRGCDPD 574
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 131/277 (47%), Gaps = 20/277 (7%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
G + + + V++ L + A+ +L RM C+ ++ +G+ + +A
Sbjct: 392 GCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEA 451
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
++V+ +M+ + Y +ID L VK A+ + +M +GI P V+ + +IK
Sbjct: 452 VQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKG 511
Query: 165 LCKNKETIDSALQIFHEM---PNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKG 221
LC ++D+AL+++HEM QPD TY L++GLC +S A +L N M ++G
Sbjct: 512 LC-GIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRG 570
Query: 222 FSPSVVTYTSLIHGMCQSDNLGEAIR-LLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQA 280
P V+T + ++ + + N + R LEE L+ L K A
Sbjct: 571 CDPDVITCNTFLNTLSEKSNSCDKGRSFLEE---------------LVVRLLKRQRVSGA 615
Query: 281 MELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVE 317
++E+M+ K+ P T+ ++ +CK K + A++
Sbjct: 616 CTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAID 652
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 228 bits (580), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 140/474 (29%), Positives = 235/474 (49%), Gaps = 42/474 (8%)
Query: 18 VEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMK 77
V + ++ E + A+ F S SN F+H TF VMI +L Q S + LL++MK
Sbjct: 46 VVKRLRQESCVPLALHFFKSIAN--SNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMK 103
Query: 78 QENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVK 137
+ +ED+ +++ Y +V A+ +F+++++F + K Y V+D L+ EN ++
Sbjct: 104 LQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQ 163
Query: 138 RAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTL 197
YR+M++ G P+V + N+L+KALCKN + +D A ++ EM N+GC PD+ +Y T+
Sbjct: 164 MIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK-VDGAKKLLVEMSNKGCCPDAVSYTTV 222
Query: 198 INGLCRMGSVSEAK------------------------------ELFNEMEEKGFSPSVV 227
I+ +C +G V E + EL EM EKG SP+V+
Sbjct: 223 ISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVI 282
Query: 228 TYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMM 287
+Y++LI+ +C S + A L +M K G PN++T S+L+ G G + A++L M
Sbjct: 283 SYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQM 342
Query: 288 VTKHN-RPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASS 346
+ +PN+V Y TL+ G C G +AV + M G PN YG +I+GF S
Sbjct: 343 IRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGS 402
Query: 347 YQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISI 406
A ++M+ G P +V ++ +V+ LC + A L M +
Sbjct: 403 LDGAVYIWNKMLTSGCCP-------NVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAP 455
Query: 407 EIDTFDCLIKCFCKRGDLNKAARILEEMISDG-CVPDKGIWDVVMGGLWDRKKV 459
+ TF+ IK C G L+ A ++ +M C P+ ++ ++ GL ++
Sbjct: 456 SVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRI 509
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 201/421 (47%), Gaps = 40/421 (9%)
Query: 44 NGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENC----VVTEDILLTICR------ 93
+GF + T+ V++ L N+ A+ LL M + C V ++ ++C
Sbjct: 175 DGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKE 234
Query: 94 --------------------GYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEE 133
G + H A + +M + + SY T+I++L
Sbjct: 235 GRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNS 294
Query: 134 NHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEM-PNRGCQPDSY 192
++ A +F +M K G P++ +L+ L+K C + T AL ++++M G QP+
Sbjct: 295 GQIELAFSFLTQMLKRGCHPNIYTLSSLVKG-CFLRGTTFDALDLWNQMIRGFGLQPNVV 353
Query: 193 TYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEM 252
Y TL+ G C G++ +A +F+ MEE G SP++ TY SLI+G + +L A+ + +M
Sbjct: 354 AYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKM 413
Query: 253 KKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKF 312
+G PNV Y+ +++ LC+ +A L+E+M ++ P++ T+ I GLC G+
Sbjct: 414 LTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRL 473
Query: 313 SEAVEILDRMRLQG-LKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSL 371
A ++ +M Q PN Y +++ G A+ ++A E+ + G+ S +T+
Sbjct: 474 DWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTY-- 531
Query: 372 HVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARIL 431
NT++ G C+ A QL M G S + T + +I +CK+G +AA++L
Sbjct: 532 -----NTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML 586
Query: 432 E 432
+
Sbjct: 587 D 587
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 175/376 (46%), Gaps = 8/376 (2%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
G + ++ +I+ L + Q A L +M + C L ++ +G DA
Sbjct: 276 GISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDA 335
Query: 105 IRVFHKM-EDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIK 163
+ ++++M F L+ +Y T++ ++ +A++ + M ++G P++ + LI
Sbjct: 336 LDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLIN 395
Query: 164 ALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFS 223
K + ++D A+ I+++M GC P+ Y ++ LCR EA+ L M ++ +
Sbjct: 396 GFAK-RGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCA 454
Query: 224 PSVVTYTSLIHGMCQSDNLGEAIRLLEEM-KKNGIEPNVFTYSTLMDGLCKGGHSLQAME 282
PSV T+ + I G+C + L A ++ +M +++ PN+ TY+ L+DGL K +A
Sbjct: 455 PSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYG 514
Query: 283 LLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFC 342
L + + + TY TL++G C G A++++ +M + G P+ II +C
Sbjct: 515 LTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYC 574
Query: 343 AASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTR 402
+ AA +D +S R W V + V+ GLC + L M +
Sbjct: 575 KQGKAERAAQMLDL-----VSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISA 629
Query: 403 GISIEIDTFDCLIKCF 418
GI I T+ LI CF
Sbjct: 630 GIVPSIATWSVLINCF 645
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 130/446 (29%), Positives = 237/446 (53%), Gaps = 16/446 (3%)
Query: 9 WPKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRS 68
PK +T+ +IK +KD KA+ MF+S E GF+H +T+ +I +L +F +
Sbjct: 6 LPKHVTA-----VIKCQKDPMKALEMFNSMRKEV--GFKHTLSTYRSVIEKLGYYGKFEA 58
Query: 69 AEGLLERMKQE-NCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVI 127
E +L M++ + E + + + YGR + +A+ VF +M+ + + T SY ++
Sbjct: 59 MEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIM 118
Query: 128 DILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGC 187
+LV+ + +A Y MR GI P V S I +K+ CK +AL++ + M ++GC
Sbjct: 119 SVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRP-HAALRLLNNMSSQGC 177
Query: 188 QPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIR 247
+ + Y T++ G +E ELF +M G S + T+ L+ +C+ ++ E +
Sbjct: 178 EMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEK 237
Query: 248 LLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLC 307
LL+++ K G+ PN+FTY+ + GLC+ G A+ ++ ++ + +P+++TY LI GLC
Sbjct: 238 LLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLC 297
Query: 308 KEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRA 367
K KF EA L +M +GL+P++ Y +I+G+C Q A + + V G P +
Sbjct: 298 KNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQF 357
Query: 368 TWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKA 427
T+ +++ GLC ++ RA L+ +GI + ++ LIK +G + +A
Sbjct: 358 TYR-------SLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEA 410
Query: 428 ARILEEMISDGCVPDKGIWDVVMGGL 453
A++ EM G +P+ +++++ GL
Sbjct: 411 AQLANEMSEKGLIPEVQTFNILVNGL 436
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 129/434 (29%), Positives = 210/434 (48%), Gaps = 12/434 (2%)
Query: 9 WPKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRS 68
P T +L Q + +++ AV M + G + D T+ +I L ++F+
Sbjct: 248 LPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQ---GPKPDVITYNNLIYGLCKNSKFQE 304
Query: 69 AEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVID 128
AE L +M E T+ GY + A R+ Q +Y ++ID
Sbjct: 305 AEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLID 364
Query: 129 ILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQ 188
L E RA+A + E GI P+V+ N LIK L N+ I A Q+ +EM +G
Sbjct: 365 GLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL-SNQGMILEAAQLANEMSEKGLI 423
Query: 189 PDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRL 248
P+ T+ L+NGLC+MG VS+A L M KG+ P + T+ LIHG + A+ +
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483
Query: 249 LEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCK 308
L+ M NG++P+V+TY++L++GLCK ME + MV K PN+ T+ L+ LC+
Sbjct: 484 LDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCR 543
Query: 309 EGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLG-GISPSRA 367
K EA+ +L+ M+ + + P+A +G +I GFC A +M +S S
Sbjct: 544 YRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTP 603
Query: 368 TWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKA 427
T+ N ++ ++ A +L+ M R + + T+ ++ FCK G++N
Sbjct: 604 TY-------NIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLG 656
Query: 428 ARILEEMISDGCVP 441
+ L EM+ +G +P
Sbjct: 657 YKFLLEMMENGFIP 670
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 200/409 (48%), Gaps = 12/409 (2%)
Query: 52 TFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDIL-LTI-CRGYGRVHRPLDAIRVFH 109
++ ++S LV + F A + RM+ +T D+ TI + + + RP A+R+ +
Sbjct: 113 SYNAIMSVLVDSGYFDQAHKVYMRMRDRG--ITPDVYSFTIRMKSFCKTSRPHAALRLLN 170
Query: 110 KMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNK 169
M + +Y TV+ EEN + +M G+ + + N L++ LCK K
Sbjct: 171 NMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCK-K 229
Query: 170 ETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTY 229
+ ++ ++ RG P+ +TY I GLC+ G + A + + E+G P V+TY
Sbjct: 230 GDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITY 289
Query: 230 TSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVT 289
+LI+G+C++ EA L +M G+EP+ +TY+TL+ G CKGG A ++ V
Sbjct: 290 NNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVF 349
Query: 290 KHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQD 349
P+ TY +LI+GLC EG+ + A+ + + +G+KPN LY +I G +
Sbjct: 350 NGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILE 409
Query: 350 AANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEID 409
AA +EM G+ P T+ N +V GLC A L M ++G +I
Sbjct: 410 AAQLANEMSEKGLIPEVQTF-------NILVNGLCKMGCVSDADGLVKVMISKGYFPDIF 462
Query: 410 TFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKK 458
TF+ LI + + + A IL+ M+ +G PD ++ ++ GL K
Sbjct: 463 TFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSK 511
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 197/429 (45%), Gaps = 12/429 (2%)
Query: 35 FDSATAEY----SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLT 90
FD A Y G D +F + + ++ +A LL M + C + T
Sbjct: 127 FDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCT 186
Query: 91 ICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMG 150
+ G+ + + +F KM + ++ ++ +L ++ VK ++ K G
Sbjct: 187 VVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRG 246
Query: 151 IPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEA 210
+ P++ + N+ I+ LC+ E +D A+++ + +G +PD TY LI GLC+ EA
Sbjct: 247 VLPNLFTYNLFIQGLCQRGE-LDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA 305
Query: 211 KELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDG 270
+ +M +G P TY +LI G C+ + A R++ + NG P+ FTY +L+DG
Sbjct: 306 EVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDG 365
Query: 271 LCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPN 330
LC G + +A+ L + K +PN++ Y TLI GL +G EA ++ + M +GL P
Sbjct: 366 LCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPE 425
Query: 331 AGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSP 390
+ +++G C DA + M+ G P T+ N ++ G + +
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTF-------NILIHGYSTQLKME 478
Query: 391 RAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVM 450
A ++ M G+ ++ T++ L+ CK + M+ GC P+ +++++
Sbjct: 479 NALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILL 538
Query: 451 GGLWDRKKV 459
L +K+
Sbjct: 539 ESLCRYRKL 547
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 173/361 (47%), Gaps = 30/361 (8%)
Query: 122 SYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHE 181
+Y +I L + + + A + +M G+ P + N LI CK + A +I +
Sbjct: 288 TYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG-MVQLAERIVGD 346
Query: 182 MPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDN 241
G PD +TY +LI+GLC G + A LFNE KG P+V+ Y +LI G+
Sbjct: 347 AVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGM 406
Query: 242 LGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGT 301
+ EA +L EM + G+ P V T++ L++GLCK G A L+++M++K P++ T+
Sbjct: 407 ILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNI 466
Query: 302 LINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGG 361
LI+G + K A+EILD M G+ P+ Y +++G C S ++D MV G
Sbjct: 467 LIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG 526
Query: 362 ISPSRATWSLHVR-----------------MHN-----------TVVQGLCSNVDSPRAF 393
+P+ T+++ + M N T++ G C N D A+
Sbjct: 527 CAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAY 586
Query: 394 QLYLSMR-TRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGG 452
L+ M +S T++ +I F ++ ++ A ++ +EM+ PD + +++ G
Sbjct: 587 TLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDG 646
Query: 453 L 453
Sbjct: 647 F 647
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 152/291 (52%), Gaps = 8/291 (2%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENC---VVTEDILLTICRGYGRVHRP 101
G + TF ++++ L A+GL++ M + + T +IL+ GY +
Sbjct: 421 GLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI---HGYSTQLKM 477
Query: 102 LDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNIL 161
+A+ + M D + +Y ++++ L + + + + Y+ M + G P++ + NIL
Sbjct: 478 ENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNIL 537
Query: 162 IKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK- 220
+++LC+ ++ +D AL + EM N+ PD+ T+GTLI+G C+ G + A LF +MEE
Sbjct: 538 LESLCRYRK-LDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAY 596
Query: 221 GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQA 280
S S TY +IH + N+ A +L +EM + P+ +TY ++DG CK G+
Sbjct: 597 KVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLG 656
Query: 281 MELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNA 331
+ L M+ P++ T G +IN LC E + EA I+ RM +GL P A
Sbjct: 657 YKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA 707
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 159/359 (44%), Gaps = 41/359 (11%)
Query: 44 NGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILL--TICRGYGRVHRP 101
NGF D T+ +I L + A L + + +++L T+ +G
Sbjct: 350 NGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKG--IKPNVILYNTLIKGLSNQGMI 407
Query: 102 LDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNIL 161
L+A ++ ++M + L +++ +++ L + V A + M G P + + NIL
Sbjct: 408 LEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNIL 467
Query: 162 IKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKG 221
I + +++AL+I M + G PD YTY +L+NGLC+ + E + M EKG
Sbjct: 468 IHGY-STQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG 526
Query: 222 FSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGG------ 275
+P++ T+ L+ +C+ L EA+ LLEEMK + P+ T+ TL+DG CK G
Sbjct: 527 CAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAY 586
Query: 276 -----------------------HSL-------QAMELLEMMVTKHNRPNMVTYGTLING 305
H+ A +L + MV + P+ TY +++G
Sbjct: 587 TLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDG 646
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISP 364
CK G + + L M G P+ G++I+ C +AA I MV G+ P
Sbjct: 647 FCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP 705
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 135/301 (44%), Gaps = 9/301 (2%)
Query: 162 IKALCKNKETIDSALQIFHEMPNR-GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
+ A+ K ++ AL++F+ M G + TY ++I L G +E+ +M E
Sbjct: 10 VTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMREN 69
Query: 221 -GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQ 279
G Y + + + EA+ + E M EP VF+Y+ +M L G+ Q
Sbjct: 70 VGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQ 129
Query: 280 AMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIIS 339
A ++ M + P++ ++ + CK + A+ +L+ M QG + N Y ++
Sbjct: 130 AHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVG 189
Query: 340 GFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSM 399
GF + + +M+ G+S +T+ N +++ LC D +L +
Sbjct: 190 GFYEENFKAEGYELFGKMLASGVSLCLSTF-------NKLLRVLCKKGDVKECEKLLDKV 242
Query: 400 RTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
RG+ + T++ I+ C+RG+L+ A R++ +I G PD ++ ++ GL K
Sbjct: 243 IKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKF 302
Query: 460 R 460
+
Sbjct: 303 Q 303
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 221 bits (564), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 139/451 (30%), Positives = 218/451 (48%), Gaps = 44/451 (9%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
G + D +TF V+I L A+Q R A +LE M V E T+ +GY A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 105 IRVFHKMEDF------------------------QLKFTQK------------SYLTVID 128
+R+ +M +F L F Q+ ++ T+++
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 129 ILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQ 188
L + HVK AI M + G P V + N +I LCK E + A+++ +M R C
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGE-VKEAVEVLDQMITRDCS 362
Query: 189 PDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRL 248
P++ TY TLI+ LC+ V EA EL + KG P V T+ SLI G+C + N A+ L
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 249 LEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCK 308
EEM+ G EP+ FTY+ L+D LC G +A+ +L+ M +++TY TLI+G CK
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 309 EGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRAT 368
K EA EI D M + G+ N+ Y +I G C + +DAA +D+M++ G P + T
Sbjct: 483 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYT 542
Query: 369 WSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAA 428
+ N+++ C D +A + +M + G +I T+ LI CK G + A+
Sbjct: 543 Y-------NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVAS 595
Query: 429 RILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
++L + G ++ V+ GL+ ++K
Sbjct: 596 KLLRSIQMKGINLTPHAYNPVIQGLFRKRKT 626
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/451 (30%), Positives = 219/451 (48%), Gaps = 44/451 (9%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
G + D + M++ LV N + E +M + + R H+ A
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
I + M + L +K++ TV+ +EE + A+ +M + G S VS+N+++
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHG 268
Query: 165 LCKNKETIDSALQIFHEMPNR-GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFS 223
CK ++ AL EM N+ G PD YT+ TL+NGLC+ G V A E+ + M ++G+
Sbjct: 269 FCKEGR-VEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD 327
Query: 224 PSVVTYTSLIHGMCQSDNLGEAIRLLEEM--------------------KKN-------- 255
P V TY S+I G+C+ + EA+ +L++M K+N
Sbjct: 328 PDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL 387
Query: 256 -------GIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCK 308
GI P+V T+++L+ GLC + AMEL E M +K P+ TY LI+ LC
Sbjct: 388 ARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCS 447
Query: 309 EGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRAT 368
+GK EA+ +L +M L G + Y +I GFC A+ ++A DEM + G+S + T
Sbjct: 448 KGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVT 507
Query: 369 WSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAA 428
+ NT++ GLC + A QL M G + T++ L+ FC+ GD+ KAA
Sbjct: 508 Y-------NTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAA 560
Query: 429 RILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
I++ M S+GC PD + ++ GL +V
Sbjct: 561 DIVQAMTSNGCEPDIVTYGTLISGLCKAGRV 591
Score = 211 bits (538), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 232/441 (52%), Gaps = 12/441 (2%)
Query: 22 IKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENC 81
++++ D + A+ +F+ A+ + F + + ++ RL + F + +LE MK C
Sbjct: 57 LRSQPDDSAALRLFNLASKK--PNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRC 114
Query: 82 VVTEDILLTICRGYGRVHRPLDAIRVFHKM-EDFQLKFTQKSYLTVIDILVEENHVKRAI 140
+ L + Y + + + V M ++F LK Y ++++LV+ N +K
Sbjct: 115 EMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVE 174
Query: 141 AFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLING 200
+ +M GI P V + N+LIKALC+ + + A+ + +MP+ G PD T+ T++ G
Sbjct: 175 ISHAKMSVWGIKPDVSTFNVLIKALCRAHQ-LRPAILMLEDMPSYGLVPDEKTFTTVMQG 233
Query: 201 LCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEM-KKNGIEP 259
G + A + +M E G S S V+ ++HG C+ + +A+ ++EM ++G P
Sbjct: 234 YIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFP 293
Query: 260 NVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEIL 319
+ +T++TL++GLCK GH A+E++++M+ + P++ TY ++I+GLCK G+ EAVE+L
Sbjct: 294 DQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVL 353
Query: 320 DRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTV 379
D+M + PN Y +IS C + ++A + GI P T+ N++
Sbjct: 354 DQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTF-------NSL 406
Query: 380 VQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGC 439
+QGLC + A +L+ MR++G + T++ LI C +G L++A +L++M GC
Sbjct: 407 IQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC 466
Query: 440 VPDKGIWDVVMGGLWDRKKVR 460
++ ++ G K R
Sbjct: 467 ARSVITYNTLIDGFCKANKTR 487
Score = 175 bits (444), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 183/377 (48%), Gaps = 42/377 (11%)
Query: 44 NGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLD 103
+GF D TF +++ L A + A +++ M QE ++ G ++ +
Sbjct: 289 DGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKE 348
Query: 104 AIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIK 163
A+ V +M +Y T+I L +EN V+ A R + GI P V + N LI+
Sbjct: 349 AVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 408
Query: 164 ALCKNKETIDSALQIFHEMPNRGCQPDSYTYG---------------------------- 195
LC + A+++F EM ++GC+PD +TY
Sbjct: 409 GLCLTRNH-RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467
Query: 196 -------TLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRL 248
TLI+G C+ EA+E+F+EME G S + VTY +LI G+C+S + +A +L
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527
Query: 249 LEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCK 308
+++M G +P+ +TY++L+ C+GG +A ++++ M + P++VTYGTLI+GLCK
Sbjct: 528 MDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587
Query: 309 EGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRAT 368
G+ A ++L ++++G+ Y +I G +A N EM+ +P A
Sbjct: 588 AGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAV 647
Query: 369 WSLHVRMHNTVVQGLCS 385
+ V +GLC+
Sbjct: 648 S------YRIVFRGLCN 658
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 151/326 (46%), Gaps = 10/326 (3%)
Query: 43 SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPL 102
S G D T+ ++I L + + A +L++M+ C + T+ G+ + ++
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTR 487
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
+A +F +ME + +Y T+ID L + V+ A +M G P + N L+
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLL 547
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF 222
C+ + I A I M + GC+PD TYGTLI+GLC+ G V A +L ++ KG
Sbjct: 548 THFCRGGD-IKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606
Query: 223 SPSVVTYTSLIHGMCQSDNLGEAIRLLEEM-KKNGIEPNVFTYSTLMDGLCKGGHSL-QA 280
+ + Y +I G+ + EAI L EM ++N P+ +Y + GLC GG + +A
Sbjct: 607 NLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREA 666
Query: 281 MELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISG 340
++ L ++ K P + L GL V++++ M +Q + + ++ G
Sbjct: 667 VDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVN-MVMQKARFSEEEVS-MVKG 724
Query: 341 FCAASSYQDAANFIDEMVLGGISPSR 366
+QDA LGG+ SR
Sbjct: 725 LLKIRKFQDAL-----ATLGGVLDSR 745
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 15/228 (6%)
Query: 15 SSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLE 74
++L++ KA K +A +FD +G + T+ +I L + + A L++
Sbjct: 474 NTLIDGFCKANK-TREAEEIFDEMEV---HGVSRNSVTYNTLIDGLCKSRRVEDAAQLMD 529
Query: 75 RM---KQENCVVTEDILLT-ICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDIL 130
+M Q+ T + LLT CRG G + + D ++ M + +Y T+I L
Sbjct: 530 QMIMEGQKPDKYTYNSLLTHFCRG-GDIKKAADIVQA---MTSNGCEPDIVTYGTLISGL 585
Query: 131 VEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRG-CQP 189
+ V+ A R ++ GI + + N +I+ L + ++T + A+ +F EM + P
Sbjct: 586 CKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTE-AINLFREMLEQNEAPP 644
Query: 190 DSYTYGTLINGLCR-MGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGM 236
D+ +Y + GLC G + EA + E+ EKGF P + L G+
Sbjct: 645 DAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 103/241 (42%), Gaps = 17/241 (7%)
Query: 15 SSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLE 74
++L++ L K+ + + A + D E G + D T+ +++ + A +++
Sbjct: 509 NTLIDGLCKSRR-VEDAAQLMDQMIME---GQKPDKYTYNSLLTHFCRGGDIKKAADIVQ 564
Query: 75 RMKQENC---VVTEDILLT-ICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDIL 130
M C +VT L++ +C+ GRV A ++ ++ + T +Y VI L
Sbjct: 565 AMTSNGCEPDIVTYGTLISGLCKA-GRVEV---ASKLLRSIQMKGINLTPHAYNPVIQGL 620
Query: 131 VEENHVKRAIAFYREMRKMG-IPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQP 189
+ AI +REM + PP VS I+ + LC I A+ E+ +G P
Sbjct: 621 FRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVP 680
Query: 190 DSYTYGTLINGLCRMGSVSEAKELFNEMEEKG-FSPSVVTYTSLIHGMCQSDNLGEAIRL 248
+ + L GL + +L N + +K FS V S++ G+ + +A+
Sbjct: 681 EFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEEV---SMVKGLLKIRKFQDALAT 737
Query: 249 L 249
L
Sbjct: 738 L 738
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 221 bits (564), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 140/482 (29%), Positives = 237/482 (49%), Gaps = 43/482 (8%)
Query: 12 QITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEG 71
+IT + +L++ +++ ++ +F ++ NG+RH + V+I +L A +F++ +
Sbjct: 75 KITPFQLYKLLELPLNVSTSMELFSWTGSQ--NGYRHSFDVYQVLIGKLGANGEFKTIDR 132
Query: 72 LLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMED-FQLKFTQKSYLTVIDIL 130
LL +MK E V E + ++I R Y + P R+ +M + + + T KSY V++IL
Sbjct: 133 LLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEIL 192
Query: 131 VEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPD 190
V N K A + +M IPP++ + +++KA C E IDSAL + +M GC P+
Sbjct: 193 VSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE-IDSALSLLRDMTKHGCVPN 251
Query: 191 SYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLE 250
S Y TLI+ L + V+EA +L EM G P T+ +I G+C+ D + EA +++
Sbjct: 252 SVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVN 311
Query: 251 EMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMEL--------------------------- 283
M G P+ TY LM+GLCK G A +L
Sbjct: 312 RMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDD 371
Query: 284 ----LEMMVTKHN-RPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKII 338
L MVT + P++ TY +LI G KEG A+E+L MR +G KPN Y ++
Sbjct: 372 AKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILV 431
Query: 339 SGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLS 398
GFC +A N ++EM G+ P+ + N ++ C P A +++
Sbjct: 432 DGFCKLGKIDEAYNVLNEMSADGLKPNTVGF-------NCLISAFCKEHRIPEAVEIFRE 484
Query: 399 MRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKK 458
M +G ++ TF+ LI C+ ++ A +L +MIS+G V + ++ ++ R +
Sbjct: 485 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE 544
Query: 459 VR 460
++
Sbjct: 545 IK 546
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/407 (29%), Positives = 202/407 (49%), Gaps = 13/407 (3%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
GF D T+G +++ L + +A+ L R+ + V I T+ G+ R DA
Sbjct: 317 GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIV----IFNTLIHGFVTHGRLDDA 372
Query: 105 IRVFHKM-EDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIK 163
V M + + +Y ++I +E V A+ +MR G P+V S IL+
Sbjct: 373 KAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVD 432
Query: 164 ALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFS 223
CK + ID A + +EM G +P++ + LI+ C+ + EA E+F EM KG
Sbjct: 433 GFCKLGK-IDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCK 491
Query: 224 PSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMEL 283
P V T+ SLI G+C+ D + A+ LL +M G+ N TY+TL++ + G +A +L
Sbjct: 492 PDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKL 551
Query: 284 LEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCA 343
+ MV + + + +TY +LI GLC+ G+ +A + ++M G P+ +I+G C
Sbjct: 552 VNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCR 611
Query: 344 ASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRG 403
+ ++A F EMVL G +P T+ N+++ GLC ++ ++ G
Sbjct: 612 SGMVEEAVEFQKEMVLRGSTPDIVTF-------NSLINGLCRAGRIEDGLTMFRKLQAEG 664
Query: 404 ISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVM 450
I + TF+ L+ CK G + A +L+E I DG VP+ W +++
Sbjct: 665 IPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILL 711
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 127/476 (26%), Positives = 215/476 (45%), Gaps = 43/476 (9%)
Query: 10 PKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSA 69
P T +V + A +I+ A+ + T +G + + +I L N+ A
Sbjct: 215 PTLFTFGVVMKAFCAVNEIDSALSLLRDMT---KHGCVPNSVIYQTLIHSLSKCNRVNEA 271
Query: 70 EGLLERMKQENCV----VTEDILLTIC-----------------RG-------YGRVHRP 101
LLE M CV D++L +C RG YG +
Sbjct: 272 LQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNG 331
Query: 102 LDAIRVFHKMEDFQLKFTQKS---YLTVIDILVEENHVKRAIAFYREM-RKMGIPPSVVS 157
L I +D + + + T+I V + A A +M GI P V +
Sbjct: 332 LCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCT 391
Query: 158 LNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEM 217
N LI K + + AL++ H+M N+GC+P+ Y+Y L++G C++G + EA + NEM
Sbjct: 392 YNSLIYGYWK-EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM 450
Query: 218 EEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHS 277
G P+ V + LI C+ + EA+ + EM + G +P+V+T+++L+ GLC+
Sbjct: 451 SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEI 510
Query: 278 LQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKI 337
A+ LL M+++ N VTY TLIN + G+ EA ++++ M QG + Y +
Sbjct: 511 KHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSL 570
Query: 338 ISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYL 397
I G C A A + ++M+ G +PS + N ++ GLC + A +
Sbjct: 571 IKGLCRAGEVDKARSLFEKMLRDGHAPSNISC-------NILINGLCRSGMVEEAVEFQK 623
Query: 398 SMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
M RG + +I TF+ LI C+ G + + ++ ++G PD ++ +M L
Sbjct: 624 EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWL 679
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 132/282 (46%), Gaps = 8/282 (2%)
Query: 43 SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPL 102
++G + + F +IS ++ A + M ++ C ++ G V
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
A+ + M + +Y T+I+ + +K A EM G P ++ N LI
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF 222
K LC+ E +D A +F +M G P + + LINGLCR G V EA E EM +G
Sbjct: 572 KGLCRAGE-VDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGS 630
Query: 223 SPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAME 282
+P +VT+ SLI+G+C++ + + + + +++ GI P+ T++TLM LCKGG A
Sbjct: 631 TPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACL 690
Query: 283 LLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRL 324
LL+ + PN T+ L+ + + E LDR R
Sbjct: 691 LLDEGIEDGFVPNHRTWSILLQSIIPQ-------ETLDRRRF 725
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 142/454 (31%), Positives = 231/454 (50%), Gaps = 21/454 (4%)
Query: 14 TSSLVEQLIKAEKD---INKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRS-A 69
TSS+ + ++K+ I+KA+ + A A +GF ++ ++ + + + S A
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQA---HGFMPGVLSYNAVLDATIRSKRNISFA 189
Query: 70 EGLLERMKQENC---VVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTV 126
E + + M + V T +IL+ RG+ A+ +F KME +Y T+
Sbjct: 190 ENVFKEMLESQVSPNVFTYNILI---RGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTL 246
Query: 127 IDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRG 186
ID + + R M G+ P+++S N++I LC+ + + + EM RG
Sbjct: 247 IDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSF-VLTEMNRRG 305
Query: 187 CQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAI 246
D TY TLI G C+ G+ +A + EM G +PSV+TYTSLIH MC++ N+ A+
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365
Query: 247 RLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGL 306
L++M+ G+ PN TY+TL+DG + G+ +A +L M P++VTY LING
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGH 425
Query: 307 CKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSR 366
C GK +A+ +L+ M+ +GL P+ Y ++SGFC + +A EMV GI P
Sbjct: 426 CVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDT 485
Query: 367 ATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNK 426
T+S +++QG C + A LY M G+ + T+ LI +C GDL K
Sbjct: 486 ITYS-------SLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEK 538
Query: 427 AARILEEMISDGCVPDKGIWDVVMGGLWDRKKVR 460
A ++ EM+ G +PD + V++ GL + + R
Sbjct: 539 ALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTR 572
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 214/451 (47%), Gaps = 58/451 (12%)
Query: 52 TFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKM 111
T+ ++I A A L ++M+ + C+ T+ GY ++ + D ++ M
Sbjct: 207 TYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSM 266
Query: 112 EDFQLKFTQKSYLTVIDILVEENHVK---------------------------------- 137
L+ SY VI+ L E +K
Sbjct: 267 ALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNF 326
Query: 138 -RAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGT 196
+A+ + EM + G+ PSV++ LI ++CK ++ A++ +M RG P+ TY T
Sbjct: 327 HQALVMHAEMLRHGLTPSVITYTSLIHSMCK-AGNMNRAMEFLDQMRVRGLCPNERTYTT 385
Query: 197 LINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNG 256
L++G + G ++EA + EM + GFSPSVVTY +LI+G C + + +AI +LE+MK+ G
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445
Query: 257 IEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAV 316
+ P+V +YST++ G C+ +A+ + MV K +P+ +TY +LI G C++ + EA
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 505
Query: 317 EILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMH 376
++ + M GL P+ Y +I+ +C + A +EMV G+ P T+S+
Sbjct: 506 DLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSV----- 560
Query: 377 NTVVQGLCSNVDSPRAFQL---------------YLSMRTRGISIEIDTFDCLIKCFCKR 421
++ GL + A +L Y ++ +IE + LIK FC +
Sbjct: 561 --LINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMK 618
Query: 422 GDLNKAARILEEMISDGCVPDKGIWDVVMGG 452
G + +A ++ E M+ PD +++++ G
Sbjct: 619 GMMTEADQVFESMLGKNHKPDGTAYNIMIHG 649
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 203/408 (49%), Gaps = 21/408 (5%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGY---GRVHRP 101
G + ++ V+I+ L + + +L M + + E T+ +GY G H+
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 102 LDAIRVFH-KMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNI 160
L V H +M L + +Y ++I + + ++ RA+ F +MR G+ P+ +
Sbjct: 330 L----VMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTT 385
Query: 161 LIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
L+ + K ++ A ++ EM + G P TY LING C G + +A + +M+EK
Sbjct: 386 LVDGFSQ-KGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEK 444
Query: 221 GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQA 280
G SP VV+Y++++ G C+S ++ EA+R+ EM + GI+P+ TYS+L+ G C+ + +A
Sbjct: 445 GLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEA 504
Query: 281 MELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISG 340
+L E M+ P+ TY LIN C EG +A+++ + M +G+ P+ Y +I+G
Sbjct: 505 CDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLING 564
Query: 341 FCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHN----------TVVQGLCSNVDSP 390
S ++A + ++ PS T+ H + N ++++G C
Sbjct: 565 LNKQSRTREAKRLLLKLFYEESVPSDVTY--HTLIENCSNIEFKSVVSLIKGFCMKGMMT 622
Query: 391 RAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDG 438
A Q++ SM + + ++ +I C+ GD+ KA + +EM+ G
Sbjct: 623 EADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 185/406 (45%), Gaps = 31/406 (7%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQE----NCVVTEDILLTICRGYGRVHR 100
G+ D T+ +I F A + M + + + ++ ++C+ G ++R
Sbjct: 305 GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA-GNMNR 363
Query: 101 PLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNI 160
A+ +M L +++Y T++D ++ ++ A REM G PSVV+ N
Sbjct: 364 ---AMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNA 420
Query: 161 LIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
LI C + ++ A+ + +M +G PD +Y T+++G CR V EA + EM EK
Sbjct: 421 LINGHCVTGK-MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK 479
Query: 221 GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQA 280
G P +TY+SLI G C+ EA L EEM + G+ P+ FTY+ L++ C G +A
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKA 539
Query: 281 MELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYG----- 335
++L MV K P++VTY LINGL K+ + EA +L ++ + P+ Y
Sbjct: 540 LQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Query: 336 ----------KIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCS 385
+I GFC +A + M+ P + N ++ G C
Sbjct: 600 CSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAY-------NIMIHGHCR 652
Query: 386 NVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARIL 431
D +A+ LY M G + T L+K K G +N+ ++
Sbjct: 653 AGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVI 698
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 141/271 (52%), Gaps = 8/271 (2%)
Query: 187 CQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSD-NLGEA 245
C S + ++ R+ + +A + + + GF P V++Y +++ +S N+ A
Sbjct: 130 CYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFA 189
Query: 246 IRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING 305
+ +EM ++ + PNVFTY+ L+ G C G+ A+ L + M TK PN+VTY TLI+G
Sbjct: 190 ENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDG 249
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPS 365
CK K + ++L M L+GL+PN Y +I+G C ++ + + EM +
Sbjct: 250 YCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM-------N 302
Query: 366 RATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLN 425
R +SL +NT+++G C + +A ++ M G++ + T+ LI CK G++N
Sbjct: 303 RRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMN 362
Query: 426 KAARILEEMISDGCVPDKGIWDVVMGGLWDR 456
+A L++M G P++ + ++ G +
Sbjct: 363 RAMEFLDQMRVRGLCPNERTYTTLVDGFSQK 393
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 141/350 (40%), Gaps = 75/350 (21%)
Query: 44 NGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILL--TICRGYGRVHRP 101
NGF T+ +I+ + A +LE MK++ ++ D++ T+ G+ R +
Sbjct: 409 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG--LSPDVVSYSTVLSGFCRSYDV 466
Query: 102 LDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNIL 161
+A+RV +M + +K +Y ++I E+ K A Y EM ++G+PP + L
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTAL 526
Query: 162 IKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGL-------------------- 201
I A C + ++ ALQ+ +EM +G PD TY LINGL
Sbjct: 527 INAYCMEGD-LEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEE 585
Query: 202 ------------------------------CRMGSVSEAKELFNEMEEKGFSPSVVTYTS 231
C G ++EA ++F M K P Y
Sbjct: 586 SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNI 645
Query: 232 LIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGG----------HSLQAM 281
+IHG C++ ++ +A L +EM K+G + T L+ L K G H L++
Sbjct: 646 MIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSC 705
Query: 282 ELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNA 331
EL E K L+ +EG +++L M G PN
Sbjct: 706 ELSEAEQAK----------VLVEINHREGNMDVVLDVLAEMAKDGFLPNG 745
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 218 bits (554), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 126/448 (28%), Positives = 231/448 (51%), Gaps = 13/448 (2%)
Query: 9 WPKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRS 68
WP+++ + +I +++I+ A+ +F A + GF H++ T+ ++ +L A F
Sbjct: 43 WPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHP-GFTHNYDTYHSILFKLSRARAFDP 101
Query: 69 AEGLLERMKQENCVVT--EDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTV 126
E L+ ++ + E++ + + R YG R ++R+F ++ DF +K + +S T+
Sbjct: 102 VESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTL 161
Query: 127 IDILVEENHVKRAIAFYREMRK-MGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR 185
+++L++ A ++ ++ GI P++ + N+L+KALCK K I+SA ++ E+P+
Sbjct: 162 LNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCK-KNDIESAYKVLDEIPSM 220
Query: 186 GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEA 245
G P+ TY T++ G G + AK + EM ++G+ P TYT L+ G C+ EA
Sbjct: 221 GLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEA 280
Query: 246 IRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING 305
++++M+KN IEPN TY ++ LCK S +A + + M+ + P+ +I+
Sbjct: 281 ATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDA 340
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPS 365
LC++ K EA + +M P+ L +I C +A DE G I PS
Sbjct: 341 LCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PS 399
Query: 366 RATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLN 425
T +NT++ G+C + A +L+ M R T++ LI+ K G++
Sbjct: 400 LLT-------YNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVK 452
Query: 426 KAARILEEMISDGCVPDKGIWDVVMGGL 453
+ R+LEEM+ GC P+K + ++ GL
Sbjct: 453 EGVRVLEEMLEIGCFPNKTTFLILFEGL 480
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 159/317 (50%), Gaps = 5/317 (1%)
Query: 10 PKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSA 69
P T +L+ + + + DI A + D S G + T+ ++ VA SA
Sbjct: 189 PNIFTCNLLVKALCKKNDIESAYKVLDEIP---SMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 70 EGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDI 129
+ +LE M + GY ++ R +A V ME +++ + +Y +I
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
Query: 130 LVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQP 189
L +E A + EM + P +I ALC++ + +D A ++ +M C P
Sbjct: 306 LCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHK-VDEACGLWRKMLKNNCMP 364
Query: 190 DSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLL 249
D+ TLI+ LC+ G V+EA++LF+E E KG PS++TY +LI GMC+ L EA RL
Sbjct: 365 DNALLSTLIHWLCKEGRVTEARKLFDEFE-KGSIPSLLTYNTLIAGMCEKGELTEAGRLW 423
Query: 250 EEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKE 309
++M + +PN FTY+ L++GL K G+ + + +LE M+ PN T+ L GL K
Sbjct: 424 DDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKL 483
Query: 310 GKFSEAVEILDRMRLQG 326
GK +A++I+ + G
Sbjct: 484 GKEEDAMKIVSMAVMNG 500
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 105/256 (41%), Gaps = 43/256 (16%)
Query: 205 GSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKN-GIEPNVFT 263
G + +F + + G SV + +L++ + Q+ + + K++ GI PN+FT
Sbjct: 134 GRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFT 193
Query: 264 YSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMR 323
+ L+ LCK A ++L+ + + PN+VTY T++ G G A +L+ M
Sbjct: 194 CNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEML 253
Query: 324 LQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGL 383
+G P+A Y ++ G+C + +AA +D+M I P+ T+ +
Sbjct: 254 DRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGV------------ 301
Query: 384 CSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDK 443
+I+ CK +A + +EM+ +PD
Sbjct: 302 ------------------------------MIRALCKEKKSGEARNMFDEMLERSFMPDS 331
Query: 444 GIWDVVMGGLWDRKKV 459
+ V+ L + KV
Sbjct: 332 SLCCKVIDALCEDHKV 347
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 129/410 (31%), Positives = 213/410 (51%), Gaps = 11/410 (2%)
Query: 44 NGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLD 103
+G D T+ VMIS A + +A +L+RM VVT + +L G++ +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQ--- 222
Query: 104 AIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIK 163
A+ V +M +Y +I+ ++ V A+ EMR G P VV+ N+L+
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 164 ALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFS 223
+CK +D A++ ++MP+ GCQP+ T+ ++ +C G +A++L +M KGFS
Sbjct: 283 GICKEGR-LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341
Query: 224 PSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMEL 283
PSVVT+ LI+ +C+ LG AI +LE+M ++G +PN +Y+ L+ G CK +A+E
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401
Query: 284 LEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCA 343
LE MV++ P++VTY T++ LCK+GK +AVEIL+++ +G P Y +I G
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK 461
Query: 344 ASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRG 403
A A +DEM + P T+S ++V GL A + + G
Sbjct: 462 AGKTGKAIKLLDEMRAKDLKPDTITYS-------SLVGGLSREGKVDEAIKFFHEFERMG 514
Query: 404 ISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
I TF+ ++ CK ++A L MI+ GC P++ + +++ GL
Sbjct: 515 IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGL 564
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 125/456 (27%), Positives = 222/456 (48%), Gaps = 24/456 (5%)
Query: 17 LVEQLIKAEKD-INKAVLMFDSATAEYSNGFRHDH-----TTFGV-------MISRLVAA 63
LV K E +N F++ ++ YSN + H ++F + + ++V
Sbjct: 56 LVSAASKVESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHLRQMVRT 115
Query: 64 NQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSY 123
+ LE M V T+ RG+ R+ + A ++ +E +Y
Sbjct: 116 GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITY 175
Query: 124 LTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMP 183
+I + + A++ + +M + P VV+ N ++++LC + + + A+++ M
Sbjct: 176 NVMISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGK-LKQAMEVLDRML 231
Query: 184 NRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLG 243
R C PD TY LI CR V A +L +EM ++G +P VVTY L++G+C+ L
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291
Query: 244 EAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLI 303
EAI+ L +M +G +PNV T++ ++ +C G + A +LL M+ K P++VT+ LI
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351
Query: 304 NGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGIS 363
N LC++G A++IL++M G +PN+ Y ++ GFC A +++ MV G
Sbjct: 352 NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411
Query: 364 PSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGD 423
P T+ NT++ LC + A ++ + ++G S + T++ +I K G
Sbjct: 412 PDIVTY-------NTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 424 LNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
KA ++L+EM + PD + ++GGL KV
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV 500
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 180/357 (50%), Gaps = 10/357 (2%)
Query: 9 WPKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRS 68
+P IT +++ + + + A+ + D G D T+ V+++ + +
Sbjct: 236 YPDVITYTILIEATCRDSGVGHAMKLLDEMR---DRGCTPDVVTYNVLVNGICKEGRLDE 292
Query: 69 AEGLLERMKQENC---VVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLT 125
A L M C V+T +I+L R R +DA ++ M + ++
Sbjct: 293 AIKFLNDMPSSGCQPNVITHNIIL---RSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349
Query: 126 VIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR 185
+I+ L + + RAI +M + G P+ +S N L+ CK K+ +D A++ M +R
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK-MDRAIEYLERMVSR 408
Query: 186 GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEA 245
GC PD TY T++ LC+ G V +A E+ N++ KG SP ++TY ++I G+ ++ G+A
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468
Query: 246 IRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING 305
I+LL+EM+ ++P+ TYS+L+ GL + G +A++ RPN VT+ +++ G
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLG 528
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGI 362
LCK + A++ L M +G KPN Y +I G ++A ++E+ G+
Sbjct: 529 LCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 133/481 (27%), Positives = 234/481 (48%), Gaps = 39/481 (8%)
Query: 16 SLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLER 75
SLV ++ K + A+ F E S RHD T MI L ++ A +L
Sbjct: 118 SLVYNVLHGAKKLEHALQFF--RWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLD 175
Query: 76 MKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENH 135
M ++ ED+ + + YG+ +++++F KM+D ++ T KSY ++ +++
Sbjct: 176 MPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGR 235
Query: 136 VKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYG 195
A ++ +M G+ P+ + N+++ + +++AL+ F +M RG PD T+
Sbjct: 236 YMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLR-LETALRFFEDMKTRGISPDDATFN 294
Query: 196 TLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKN 255
T+ING CR + EA++LF EM+ PSVV+YT++I G D + + +R+ EEM+ +
Sbjct: 295 TMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSS 354
Query: 256 GIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRP-NMVTYGTLINGLCKEGKFSE 314
GIEPN TYSTL+ GLC G ++A +L+ M+ KH P + + L+ K G +
Sbjct: 355 GIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAA 414
Query: 315 AVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGIS-PSRATWSLHV 373
A E+L M + AG YG +I C AS+Y A +D ++ I + T +
Sbjct: 415 ATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEP 474
Query: 374 RMHNTVVQGLCSNVDSPRA----------------------------------FQLYLSM 399
+N +++ LC+N + +A +++ M
Sbjct: 475 SAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLIRGHAKEGNPDSSYEILKIM 534
Query: 400 RTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
RG+ E + ++ LIK + +G+ A L+ M+ DG VPD ++ V+ L++ +V
Sbjct: 535 SRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRV 594
Query: 460 R 460
+
Sbjct: 595 Q 595
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 121/275 (44%), Gaps = 11/275 (4%)
Query: 94 GYGRVHRPLDAI---RVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMG 150
Y R + LD + + + +D L+ +Y +I+ L +A +R++ K G
Sbjct: 446 AYNRAIKLLDTLIEKEIILRHQD-TLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRG 504
Query: 151 IPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEA 210
+ +LN LI+ K DS+ +I M RG +S Y LI G +A
Sbjct: 505 VQDQD-ALNNLIRGHAKEGNP-DSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDA 562
Query: 211 KELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEM--KKNGIEPNVFTYSTLM 268
K + M E G P + S+I + + + A R++ M K GIE N+ + ++
Sbjct: 563 KTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKIL 622
Query: 269 DGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLK 328
+ L GH +A+ ++++ + + +L++ L ++GK A+++LD + L
Sbjct: 623 EALLMRGHVEEALGRIDLL---NQNGHTADLDSLLSVLSEKGKTIAALKLLDFGLERDLS 679
Query: 329 PNAGLYGKIISGFCAASSYQDAANFIDEMVLGGIS 363
Y K++ A +A + + +++ G S
Sbjct: 680 LEFSSYDKVLDALLGAGKTLNAYSVLCKIMEKGSS 714
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 211 bits (537), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 125/452 (27%), Positives = 222/452 (49%), Gaps = 35/452 (7%)
Query: 30 KAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLER---MKQENCVVTED 86
K + F + G+ D TF +++ + A L++R MKQ +VT
Sbjct: 120 KLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVS 179
Query: 87 ILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREM 146
L+ GRV +A+ + +M ++ + + +Y V++ L + + A+ +R+M
Sbjct: 180 TLINGLCLKGRVS---EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM 236
Query: 147 RKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGS 206
+ I SVV +I+I +LCK+ + D AL +F+EM +G + D TY +LI GLC G
Sbjct: 237 EERNIKASVVQYSIVIDSLCKDG-SFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 295
Query: 207 VSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYST 266
+ ++ EM + P VVT+++LI + L EA L EM GI P+ TY++
Sbjct: 296 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNS 355
Query: 267 LMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQG 326
L+DG CK +A ++ ++MV+K P++VTY LIN CK + + + + + +G
Sbjct: 356 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 415
Query: 327 LKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATW----------------- 369
L PN Y ++ GFC + A EMV G+ PS T+
Sbjct: 416 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 475
Query: 370 -----------SLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCF 418
+L + ++N ++ G+C+ A+ L+ S+ +G+ ++ T++ +I
Sbjct: 476 EIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGL 535
Query: 419 CKRGDLNKAARILEEMISDGCVPDKGIWDVVM 450
CK+G L++A + +M DGC PD +++++
Sbjct: 536 CKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 134/452 (29%), Positives = 232/452 (51%), Gaps = 19/452 (4%)
Query: 10 PKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSA 69
P +T S + + + +++A+++ D EY GF+ D T+G +++RL + A
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDR-MVEY--GFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 70 EGLLERMKQEN---CVVTEDILL-TICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLT 125
L +M++ N VV I++ ++C+ G DA+ +F++ME +K +Y +
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKD-GSFD---DALSLFNEMEMKGIKADVVTYSS 285
Query: 126 VIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR 185
+I L + REM I P VV+ + LI K + ++ A ++++EM R
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE-AKELYNEMITR 344
Query: 186 GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEA 245
G PD+ TY +LI+G C+ + EA ++F+ M KG P +VTY+ LI+ C++ + +
Sbjct: 345 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG 404
Query: 246 IRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING 305
+RL E+ G+ PN TY+TL+ G C+ G A EL + MV++ P++VTYG L++G
Sbjct: 405 MRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPS 365
LC G+ ++A+EI ++M+ + G+Y II G C AS DA + + G+ P
Sbjct: 465 LCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 524
Query: 366 RATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLN 425
T+ N ++ GLC A L+ M+ G + + T++ LI+ L
Sbjct: 525 VVTY-------NVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLI 577
Query: 426 KAARILEEMISDGCVPDKGIWDVVMGGLWDRK 457
+ ++EEM G D +V+ L DR+
Sbjct: 578 SSVELIEEMKVCGFSADSSTIKMVIDMLSDRR 609
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 124/416 (29%), Positives = 201/416 (48%), Gaps = 8/416 (1%)
Query: 44 NGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLD 103
NG HD T +MI+ + A +L R + T+ G+ R +
Sbjct: 99 NGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSE 158
Query: 104 AIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIK 163
A+ + +M + + + + T+I+ L + V A+ M + G P V+ ++
Sbjct: 159 AVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLN 218
Query: 164 ALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFS 223
LCK+ + AL +F +M R + Y +I+ LC+ GS +A LFNEME KG
Sbjct: 219 RLCKSGNSA-LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIK 277
Query: 224 PSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMEL 283
VVTY+SLI G+C + ++L EM I P+V T+S L+D K G L+A EL
Sbjct: 278 ADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKEL 337
Query: 284 LEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCA 343
M+T+ P+ +TY +LI+G CKE EA ++ D M +G +P+ Y +I+ +C
Sbjct: 338 YNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCK 397
Query: 344 ASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRG 403
A D E+ G+ P+ T+ NT+V G C + A +L+ M +RG
Sbjct: 398 AKRVDDGMRLFREISSKGLIPNTITY-------NTLVLGFCQSGKLNAAKELFQEMVSRG 450
Query: 404 ISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
+ + T+ L+ C G+LNKA I E+M GI+++++ G+ + KV
Sbjct: 451 VPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKV 506
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 183/357 (51%), Gaps = 8/357 (2%)
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
DAI +F M + T + + + + F + M GI + ++ I+I
Sbjct: 53 DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMI 112
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF 222
C+ K+ + A + G +PD+ T+ TL+NG C G VSEA L + M E
Sbjct: 113 NCYCRKKKLL-FAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ 171
Query: 223 SPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAME 282
P +VT ++LI+G+C + EA+ L++ M + G +P+ TY +++ LCK G+S A++
Sbjct: 172 RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALD 231
Query: 283 LLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFC 342
L M ++ + ++V Y +I+ LCK+G F +A+ + + M ++G+K + Y +I G C
Sbjct: 232 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 291
Query: 343 AASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTR 402
+ D A + EM+ I P T+S + + V +G A +LY M TR
Sbjct: 292 NDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVF--VKEG-----KLLEAKELYNEMITR 344
Query: 403 GISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
GI+ + T++ LI FCK L++A ++ + M+S GC PD + +++ K+V
Sbjct: 345 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV 401
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 128/271 (47%), Gaps = 7/271 (2%)
Query: 172 IDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTS 231
++ A+ +F M P + L + + R ME G + T T
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 232 LIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKH 291
+I+ C+ L A +L K G EP+ T+STL++G C G +A+ L++ MV
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 292 NRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAA 351
RP++VT TLINGLC +G+ SEA+ ++DRM G +P+ YG +++ C + + A
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 352 NFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTF 411
+ +M I S +S+ V+ LC + A L+ M +GI ++ T+
Sbjct: 231 DLFRKMEERNIKASVVQYSI-------VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY 283
Query: 412 DCLIKCFCKRGDLNKAARILEEMISDGCVPD 442
LI C G + A++L EMI +PD
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 314
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 208 bits (530), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 135/502 (26%), Positives = 236/502 (47%), Gaps = 70/502 (13%)
Query: 16 SLVE--QLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLL 73
S+VE +L+ A +NK L+ + G HD T+ + I+ +Q A +L
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 74 ERMKQ---ENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDIL 130
+M + E +VT L ++ GY R DA+ + +M + K ++ T+I L
Sbjct: 142 AKMMKLGYEPDIVT---LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL 198
Query: 131 VEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKET------------------- 171
N A+A +M + G P +V+ ++ LCK +
Sbjct: 199 FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADV 258
Query: 172 ---------------IDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNE 216
+D AL +F EM N+G +PD +TY +LI+ LC G S+A L ++
Sbjct: 259 VIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD 318
Query: 217 MEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGH 276
M E+ +P+VVT+++LI + L EA +L +EM K I+P++FTYS+L++G C
Sbjct: 319 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 378
Query: 277 SLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGK 336
+A + E+M++K PN+VTY TLI G CK + E +E+ M +GL N Y
Sbjct: 379 LDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 337 IISGFCAASSYQDAANFIDEMVLGGISPS----------------------------RAT 368
+I GF A +A +MV G+ P+ R+T
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498
Query: 369 WSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAA 428
+ +N +++G+C ++L+ ++ +G+S + ++ +I FC++G +A
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEAD 558
Query: 429 RILEEMISDGCVPDKGIWDVVM 450
+L++M DG +P+ G ++ ++
Sbjct: 559 SLLKKMKEDGPLPNSGTYNTLI 580
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 129/464 (27%), Positives = 207/464 (44%), Gaps = 44/464 (9%)
Query: 26 KDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTE 85
K I+ AV + D G++ D TF +I L N+ A L+++M Q C
Sbjct: 167 KRISDAVALVDQMV---EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDL 223
Query: 86 DILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYRE 145
T+ G + A+ + KME +++ Y T+ID L + H+ A+ + E
Sbjct: 224 VTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTE 283
Query: 146 MRKMGIPPSVVSLNILIKALCKNKETIDS------------------------------- 174
M GI P V + + LI LC D+
Sbjct: 284 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 343
Query: 175 ---ALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTS 231
A +++ EM R PD +TY +LING C + EAK +F M K P+VVTY++
Sbjct: 344 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYST 403
Query: 232 LIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKH 291
LI G C++ + E + L EM + G+ N TY+TL+ G + A + + MV+
Sbjct: 404 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 463
Query: 292 NRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAA 351
PN++TY L++GLCK GK ++A+ + + ++ ++P+ Y +I G C A +D
Sbjct: 464 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGW 523
Query: 352 NFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTF 411
+ L G+SP +V +NT++ G C A L M+ G T+
Sbjct: 524 ELFCNLSLKGVSP-------NVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTY 576
Query: 412 DCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWD 455
+ LI+ + GD +A +++EM S G D +V L D
Sbjct: 577 NTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHD 620
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 185/382 (48%), Gaps = 15/382 (3%)
Query: 49 DHTTFGVMISRLVAANQFRSAEGLLERMKQENC---VVTEDILLTICRGYGRVHRPLDAI 105
D + +I L A L M + V T L++ YGR DA
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS---DAS 313
Query: 106 RVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKAL 165
R+ M + ++ ++ +ID V+E + A Y EM K I P + + + LI
Sbjct: 314 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373
Query: 166 CKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPS 225
C + + +D A +F M ++ C P+ TY TLI G C+ V E ELF EM ++G +
Sbjct: 374 CMH-DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGN 432
Query: 226 VVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLE 285
VTYT+LIHG Q+ + A + ++M G+ PN+ TY+ L+DGLCK G +AM + E
Sbjct: 433 TVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFE 492
Query: 286 MMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAAS 345
+ P++ TY +I G+CK GK + E+ + L+G+ PN Y +ISGFC
Sbjct: 493 YLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKG 552
Query: 346 SYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGIS 405
S ++A + + +M G P+ T+ NT+++ + D + +L MR+ G +
Sbjct: 553 SKEEADSLLKKMKEDGPLPNSGTY-------NTLIRARLRDGDREASAELIKEMRSCGFA 605
Query: 406 IEIDTFDCLIKCFCKRGDLNKA 427
+ T L+ G L+K+
Sbjct: 606 GDASTIG-LVTNMLHDGRLDKS 626
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 180/357 (50%), Gaps = 8/357 (2%)
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
DA+ +F M + + + ++ + + N + I+ +M+ +GI + + +I I
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF 222
C+ + + AL + +M G +PD T +L+NG C +S+A L ++M E G+
Sbjct: 126 NCFCR-RSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 223 SPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAME 282
P T+T+LIHG+ + EA+ L+++M + G +P++ TY T+++GLCK G A+
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 283 LLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFC 342
LL+ M ++V Y T+I+GLCK +A+ + M +G++P+ Y +IS C
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304
Query: 343 AASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTR 402
+ DA+ + +M+ I+P+ T+S ++ A +LY M R
Sbjct: 305 NYGRWSDASRLLSDMIERKINPNVVTFS-------ALIDAFVKEGKLVEAEKLYDEMIKR 357
Query: 403 GISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
I +I T+ LI FC L++A + E MIS C P+ + ++ G K+V
Sbjct: 358 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 414
Score = 171 bits (434), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 100/318 (31%), Positives = 165/318 (51%), Gaps = 8/318 (2%)
Query: 136 VKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYG 195
V A+ + +M K PS+V N L+ A+ K + + + + +M G D YTY
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNK-FELVISLGEQMQTLGISHDLYTYS 122
Query: 196 TLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKN 255
IN CR +S A + +M + G+ P +VT +SL++G C S + +A+ L+++M +
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 256 GIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEA 315
G +P+ FT++TL+ GL + +A+ L++ MV + +P++VTYGT++NGLCK G A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 316 VEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRM 375
+ +L +M ++ + +Y II G C DA N EM GI P T+S
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYS----- 297
Query: 376 HNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMI 435
+++ LC+ A +L M R I+ + TF LI F K G L +A ++ +EMI
Sbjct: 298 --SLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 355
Query: 436 SDGCVPDKGIWDVVMGGL 453
PD + ++ G
Sbjct: 356 KRSIDPDIFTYSSLINGF 373
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 132/298 (44%), Gaps = 34/298 (11%)
Query: 179 FHEMPNRGCQPDSYTYGT------LINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSL 232
F + GC S+ + L N L + V +A +LF +M + PS+V + L
Sbjct: 30 FFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKL 89
Query: 233 IHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHN 292
+ + + + I L E+M+ GI +++TYS ++ C+ A+ +L M+
Sbjct: 90 LSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGY 149
Query: 293 RPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAAN 352
P++VT +L+NG C + S+AV ++D+M G KP+ + +I G + +A
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 353 FIDEMVLGGISPSRATWSL----------------------------HVRMHNTVVQGLC 384
+D+MV G P T+ V ++NT++ GLC
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC 269
Query: 385 SNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPD 442
A L+ M +GI ++ T+ LI C C G + A+R+L +MI P+
Sbjct: 270 KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPN 327
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 126/300 (42%), Gaps = 39/300 (13%)
Query: 10 PKQIT-SSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRS 68
P +T S+L++ +K E + +A ++D D T+ +I+ ++
Sbjct: 326 PNVVTFSALIDAFVK-EGKLVEAEKLYDEMIKR---SIDPDIFTYSSLINGFCMHDRLDE 381
Query: 69 AEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVID 128
A+ + E M ++C T+ +G+ + R + + +F +M L +Y T+I
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIH 441
Query: 129 ILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKE------------------ 170
+ A +++M +G+ P++++ NIL+ LCKN +
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 501
Query: 171 ----------------TIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELF 214
++ ++F + +G P+ Y T+I+G CR GS EA L
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLL 561
Query: 215 NEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKG 274
+M+E G P+ TY +LI + + + L++EM+ G + T + + L G
Sbjct: 562 KKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG 621
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/431 (28%), Positives = 217/431 (50%), Gaps = 29/431 (6%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
G+ D ++ +++ + L+E MK++ I +I R+ + +A
Sbjct: 276 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 335
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
F +M + Y T+ID + ++ A F+ EM I P V++ +I
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
C+ + +++ ++FHEM +G +PDS T+ LING C+ G + +A + N M + G SP
Sbjct: 396 FCQIGDMVEAG-KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
+VVTYT+LI G+C+ +L A LL EM K G++PN+FTY+++++GLCK G+ +A++L+
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAA 344
+ VTY TL++ CK G+ +A EIL M +GL+P + +++GFC
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH 574
Query: 345 SSYQDAANFIDEMVLGGISPSRATWSLHVRM----------------------------H 376
+D ++ M+ GI+P+ T++ V+ +
Sbjct: 575 GMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTY 634
Query: 377 NTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMIS 436
+V+G C + A+ L+ M+ +G S+ + T+ LIK F KR +A + ++M
Sbjct: 635 ENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR 694
Query: 437 DGCVPDKGIWD 447
+G DK I+D
Sbjct: 695 EGLAADKEIFD 705
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/447 (26%), Positives = 206/447 (46%), Gaps = 39/447 (8%)
Query: 14 TSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLL 73
T L+ L+K + D + FD A + + + ++I VA+ + A+ L+
Sbjct: 87 TDHLIWVLMKIKCDYRLVLDFFDWARSRRDSNLE----SLCIVIHLAVASKDLKVAQSLI 142
Query: 74 ----ERMK---QENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTV 126
ER K ++ V D+L+ + +G R D F + DF L
Sbjct: 143 SSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVF--FQVLVDFGL---------- 190
Query: 127 IDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRG 186
++ A + +M G+ SV S N+ + L K+ +A+ +F E P G
Sbjct: 191 ---------LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVG 241
Query: 187 CQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAI 246
+ +Y +I+ +C++G + EA L ME KG++P V++Y+++++G C+ L +
Sbjct: 242 VCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVW 301
Query: 247 RLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGL 306
+L+E MK+ G++PN + Y +++ LC+ +A E M+ + P+ V Y TLI+G
Sbjct: 302 KLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGF 361
Query: 307 CKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSR 366
CK G A + M + + P+ Y IISGFC +A EM G+ P
Sbjct: 362 CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS 421
Query: 367 ATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNK 426
T++ ++ G C AF+++ M G S + T+ LI CK GDL+
Sbjct: 422 VTFT-------ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474
Query: 427 AARILEEMISDGCVPDKGIWDVVMGGL 453
A +L EM G P+ ++ ++ GL
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGL 501
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 160/365 (43%), Gaps = 40/365 (10%)
Query: 44 NGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILL--TICRGYGRVHRP 101
G D + +I R+A M + +T D+L I G+ ++
Sbjct: 345 QGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD--ITPDVLTYTAIISGFCQIGDM 402
Query: 102 LDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNIL 161
++A ++FH+M L+ ++ +I+ + H+K A + M + G P+VV+ L
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 162 IKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEA----------- 210
I LCK + +DSA ++ HEM G QP+ +TY +++NGLC+ G++ EA
Sbjct: 463 IDGLCKEGD-LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 211 ------------------------KELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAI 246
+E+ EM KG P++VT+ L++G C L +
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
Query: 247 RLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGL 306
+LL M GI PN T+++L+ C + A + + M ++ P+ TY L+ G
Sbjct: 582 KLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGH 641
Query: 307 CKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSR 366
CK EA + M+ +G + Y +I GF + +A D+M G++ +
Sbjct: 642 CKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADK 701
Query: 367 ATWSL 371
+
Sbjct: 702 EIFDF 706
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 138/293 (47%), Gaps = 1/293 (0%)
Query: 42 YSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRP 101
+ G D TF +I+ A + A + M Q C T+ G +
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 102 LDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNIL 161
A + H+M L+ +Y ++++ L + +++ A+ E G+ V+ L
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 162 IKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKG 221
+ A CK+ E +D A +I EM +G QP T+ L+NG C G + + ++L N M KG
Sbjct: 533 MDAYCKSGE-MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 222 FSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAM 281
+P+ T+ SL+ C +NL A + ++M G+ P+ TY L+ G CK + +A
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651
Query: 282 ELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLY 334
L + M K ++ TY LI G K KF EA E+ D+MR +GL + ++
Sbjct: 652 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 110/262 (41%), Gaps = 42/262 (16%)
Query: 51 TTFGVMISRLVAANQFRSAEGLLERMK----QENCVVTEDILLTICRGYGRVHRPLDAIR 106
T+ +I L SA LL M Q N I+ +C+ G + +A++
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS-GNIE---EAVK 512
Query: 107 VFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALC 166
+ + E L +Y T++D + + +A +EM G+ P++V+ N+L+ C
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 167 ---------------------KNKETIDS-------------ALQIFHEMPNRGCQPDSY 192
N T +S A I+ +M +RG PD
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Query: 193 TYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEM 252
TY L+ G C+ ++ EA LF EM+ KGFS SV TY+ LI G + EA + ++M
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
Query: 253 KKNGIEPNVFTYSTLMDGLCKG 274
++ G+ + + D KG
Sbjct: 693 RREGLAADKEIFDFFSDTKYKG 714
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/431 (28%), Positives = 217/431 (50%), Gaps = 29/431 (6%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
G+ D ++ +++ + L+E MK++ I +I R+ + +A
Sbjct: 276 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 335
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
F +M + Y T+ID + ++ A F+ EM I P V++ +I
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
C+ + +++ ++FHEM +G +PDS T+ LING C+ G + +A + N M + G SP
Sbjct: 396 FCQIGDMVEAG-KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
+VVTYT+LI G+C+ +L A LL EM K G++PN+FTY+++++GLCK G+ +A++L+
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAA 344
+ VTY TL++ CK G+ +A EIL M +GL+P + +++GFC
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH 574
Query: 345 SSYQDAANFIDEMVLGGISPSRATWSLHVRM----------------------------H 376
+D ++ M+ GI+P+ T++ V+ +
Sbjct: 575 GMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTY 634
Query: 377 NTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMIS 436
+V+G C + A+ L+ M+ +G S+ + T+ LIK F KR +A + ++M
Sbjct: 635 ENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR 694
Query: 437 DGCVPDKGIWD 447
+G DK I+D
Sbjct: 695 EGLAADKEIFD 705
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/447 (26%), Positives = 206/447 (46%), Gaps = 39/447 (8%)
Query: 14 TSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLL 73
T L+ L+K + D + FD A + + + ++I VA+ + A+ L+
Sbjct: 87 TDHLIWVLMKIKCDYRLVLDFFDWARSRRDSNLE----SLCIVIHLAVASKDLKVAQSLI 142
Query: 74 ----ERMK---QENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTV 126
ER K ++ V D+L+ + +G R D F + DF L
Sbjct: 143 SSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVF--FQVLVDFGL---------- 190
Query: 127 IDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRG 186
++ A + +M G+ SV S N+ + L K+ +A+ +F E P G
Sbjct: 191 ---------LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVG 241
Query: 187 CQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAI 246
+ +Y +I+ +C++G + EA L ME KG++P V++Y+++++G C+ L +
Sbjct: 242 VCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVW 301
Query: 247 RLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGL 306
+L+E MK+ G++PN + Y +++ LC+ +A E M+ + P+ V Y TLI+G
Sbjct: 302 KLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGF 361
Query: 307 CKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSR 366
CK G A + M + + P+ Y IISGFC +A EM G+ P
Sbjct: 362 CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS 421
Query: 367 ATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNK 426
T++ ++ G C AF+++ M G S + T+ LI CK GDL+
Sbjct: 422 VTFT-------ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474
Query: 427 AARILEEMISDGCVPDKGIWDVVMGGL 453
A +L EM G P+ ++ ++ GL
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGL 501
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 160/365 (43%), Gaps = 40/365 (10%)
Query: 44 NGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILL--TICRGYGRVHRP 101
G D + +I R+A M + +T D+L I G+ ++
Sbjct: 345 QGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD--ITPDVLTYTAIISGFCQIGDM 402
Query: 102 LDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNIL 161
++A ++FH+M L+ ++ +I+ + H+K A + M + G P+VV+ L
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 162 IKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEA----------- 210
I LCK + +DSA ++ HEM G QP+ +TY +++NGLC+ G++ EA
Sbjct: 463 IDGLCKEGD-LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 211 ------------------------KELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAI 246
+E+ EM KG P++VT+ L++G C L +
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
Query: 247 RLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGL 306
+LL M GI PN T+++L+ C + A + + M ++ P+ TY L+ G
Sbjct: 582 KLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGH 641
Query: 307 CKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSR 366
CK EA + M+ +G + Y +I GF + +A D+M G++ +
Sbjct: 642 CKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADK 701
Query: 367 ATWSL 371
+
Sbjct: 702 EIFDF 706
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 138/293 (47%), Gaps = 1/293 (0%)
Query: 42 YSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRP 101
+ G D TF +I+ A + A + M Q C T+ G +
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 102 LDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNIL 161
A + H+M L+ +Y ++++ L + +++ A+ E G+ V+ L
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 162 IKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKG 221
+ A CK+ E +D A +I EM +G QP T+ L+NG C G + + ++L N M KG
Sbjct: 533 MDAYCKSGE-MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 222 FSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAM 281
+P+ T+ SL+ C +NL A + ++M G+ P+ TY L+ G CK + +A
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651
Query: 282 ELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLY 334
L + M K ++ TY LI G K KF EA E+ D+MR +GL + ++
Sbjct: 652 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 110/262 (41%), Gaps = 42/262 (16%)
Query: 51 TTFGVMISRLVAANQFRSAEGLLERMK----QENCVVTEDILLTICRGYGRVHRPLDAIR 106
T+ +I L SA LL M Q N I+ +C+ G + +A++
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS-GNIE---EAVK 512
Query: 107 VFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALC 166
+ + E L +Y T++D + + +A +EM G+ P++V+ N+L+ C
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 167 ---------------------KNKETIDS-------------ALQIFHEMPNRGCQPDSY 192
N T +S A I+ +M +RG PD
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Query: 193 TYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEM 252
TY L+ G C+ ++ EA LF EM+ KGFS SV TY+ LI G + EA + ++M
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
Query: 253 KKNGIEPNVFTYSTLMDGLCKG 274
++ G+ + + D KG
Sbjct: 693 RREGLAADKEIFDFFSDTKYKG 714
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 202 bits (513), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 213/434 (49%), Gaps = 29/434 (6%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
G+ D T +++ N+ A L+ +M + T+ G R +R +A
Sbjct: 146 GYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEA 205
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
+ + +M + +Y V++ L + + A++ ++M + I P VV N +I A
Sbjct: 206 VALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDA 265
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
LC N + ++ AL +F EM N+G +P+ TY +LI LC G S+A L ++M E+ +P
Sbjct: 266 LC-NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 324
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
+VVT+++LI + L EA +L +EM K I+P++FTYS+L++G C +A +
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 384
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAA 344
E+M++K PN+VTY TLI G CK + E +E+ M +GL N Y +I GF A
Sbjct: 385 ELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 444
Query: 345 SSYQDAANFIDEMVLGGISPSRATWSL----------------------------HVRMH 376
+A +MV G+ P T+S+ + +
Sbjct: 445 RECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTY 504
Query: 377 NTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMIS 436
N +++G+C + L+ S+ +G+ + T+ ++ FC++G +A + EM
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKE 564
Query: 437 DGCVPDKGIWDVVM 450
+G +PD G ++ ++
Sbjct: 565 EGPLPDSGTYNTLI 578
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 200/411 (48%), Gaps = 16/411 (3%)
Query: 53 FGVMISRLVAANQFRSAEGLLERMKQ---ENCVVTEDILLT-ICRGYGRVHRPLDAIRVF 108
F ++S + N+F L E+M+ + + T IL+ CR R L A+ V
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCR---RSQLSL-ALAVL 139
Query: 109 HKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKN 168
KM + + ++++ N + A++ +M +MG P + N LI L ++
Sbjct: 140 AKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRH 199
Query: 169 KETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVT 228
A+ + M +GCQPD TYG ++NGLC+ G + A L +ME+ P VV
Sbjct: 200 NRA-SEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI 258
Query: 229 YTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMV 288
Y ++I +C N+ +A+ L EM GI PNV TY++L+ LC G A LL M+
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 289 TKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQ 348
+ PN+VT+ LI+ KEGK EA ++ D M + + P+ Y +I+GFC
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 349 DAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEI 408
+A + + M+ P+ T+ NT+++G C +L+ M RG+
Sbjct: 379 EAKHMFELMISKDCFPNVVTY-------NTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Query: 409 DTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
T+ LI F + + + A + ++M+SDG +PD + +++ GL + KV
Sbjct: 432 VTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKV 482
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 166/315 (52%), Gaps = 8/315 (2%)
Query: 139 AIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLI 198
A+ + +M K PS+V + L+ A+ K + D + + +M N G + YTY LI
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNK-FDLVISLGEQMQNLGISHNLYTYSILI 123
Query: 199 NGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIE 258
N CR +S A + +M + G+ P +VT SL++G C + + +A+ L+ +M + G +
Sbjct: 124 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ 183
Query: 259 PNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEI 318
P+ FT++TL+ GL + + +A+ L++ MV K +P++VTYG ++NGLCK G A+ +
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 319 LDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNT 378
L +M ++P +Y II C + DA N EM GI P+ T+ N+
Sbjct: 244 LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY-------NS 296
Query: 379 VVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDG 438
+++ LC+ A +L M R I+ + TF LI F K G L +A ++ +EMI
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 356
Query: 439 CVPDKGIWDVVMGGL 453
PD + ++ G
Sbjct: 357 IDPDIFTYSSLINGF 371
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 152/295 (51%), Gaps = 4/295 (1%)
Query: 82 VVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIA 141
VVT + L+ YGR DA R+ M + ++ ++ +ID V+E + A
Sbjct: 291 VVTYNSLIRCLCNYGRWS---DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 347
Query: 142 FYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGL 201
Y EM K I P + + + LI C + + +D A +F M ++ C P+ TY TLI G
Sbjct: 348 LYDEMIKRSIDPDIFTYSSLINGFCMH-DRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 406
Query: 202 CRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNV 261
C+ V E ELF EM ++G + VTYT+LIHG Q+ A + ++M +G+ P++
Sbjct: 407 CKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDI 466
Query: 262 FTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDR 321
TYS L+DGLC G A+ + E + P++ TY +I G+CK GK + ++
Sbjct: 467 MTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 526
Query: 322 MRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMH 376
+ L+G+KPN Y ++SGFC ++A EM G P T++ +R H
Sbjct: 527 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAH 581
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 143/275 (52%), Gaps = 7/275 (2%)
Query: 168 NKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVV 227
N +D A+ +F +M P + L++ + +M L +M+ G S ++
Sbjct: 58 NDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 117
Query: 228 TYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMM 287
TY+ LI+ C+ L A+ +L +M K G EP++ T ++L++G C G A+ L+ M
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM 177
Query: 288 VTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSY 347
V +P+ T+ TLI+GL + + SEAV ++DRM ++G +P+ YG +++G C
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237
Query: 348 QDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIE 407
A + + +M G I P V ++NT++ LC+ + A L+ M +GI
Sbjct: 238 DLALSLLKKMEQGKIEPG-------VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPN 290
Query: 408 IDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPD 442
+ T++ LI+C C G + A+R+L +MI P+
Sbjct: 291 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 325
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 149/307 (48%), Gaps = 7/307 (2%)
Query: 10 PKQIT-SSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRS 68
P +T S+L++ +K E + +A ++D D T+ +I+ ++
Sbjct: 324 PNVVTFSALIDAFVK-EGKLVEAEKLYDEMIKR---SIDPDIFTYSSLINGFCMHDRLDE 379
Query: 69 AEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVID 128
A+ + E M ++C T+ +G+ + R + + +F +M L +Y T+I
Sbjct: 380 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIH 439
Query: 129 ILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQ 188
+ A +++M G+ P +++ +IL+ LC N + +++AL +F + +
Sbjct: 440 GFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK-VETALVVFEYLQRSKME 498
Query: 189 PDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRL 248
PD YTY +I G+C+ G V + +LF + KG P+VVTYT+++ G C+ EA L
Sbjct: 499 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 558
Query: 249 LEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCK 308
EMK+ G P+ TY+TL+ + G + EL+ M + + T G L+ +
Sbjct: 559 FREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVTNMLH 617
Query: 309 EGKFSEA 315
+G+ ++
Sbjct: 618 DGRLDKS 624
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 128/275 (46%), Gaps = 5/275 (1%)
Query: 51 TTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILL--TICRGYGRVHRPLDAIRVF 108
TF +I V + AE L + M + + + DI ++ G+ R +A +F
Sbjct: 327 VTFSALIDAFVKEGKLVEAEKLYDEMIKRS--IDPDIFTYSSLINGFCMHDRLDEAKHMF 384
Query: 109 HKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKN 168
M +Y T+I + V + +REM + G+ + V+ LI +
Sbjct: 385 ELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 444
Query: 169 KETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVT 228
+E D+A +F +M + G PD TY L++GLC G V A +F ++ P + T
Sbjct: 445 REC-DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYT 503
Query: 229 YTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMV 288
Y +I GMC++ + + L + G++PNV TY+T+M G C+ G +A L M
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMK 563
Query: 289 TKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMR 323
+ P+ TY TLI ++G + + E++ MR
Sbjct: 564 EEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 598
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 133/411 (32%), Positives = 208/411 (50%), Gaps = 28/411 (6%)
Query: 53 FGVMISRLVAANQFRSAEGLLERMKQENCVVTED-----ILLT-ICRGYGRVHRPLDAIR 106
F ++S + N+F L ERM +N ++ D IL+ CR R PL A+
Sbjct: 83 FNKLLSAIAKMNKFDLVISLGERM--QNLRISYDLYSYNILINCFCR---RSQLPL-ALA 136
Query: 107 VFHKMEDFQLKFTQKSYLTVIDILVEENHVKR---AIAFYREMRKMGIPPSVVSLNILIK 163
V KM +L + + +T+ +L H KR A+A +M M P+ V+ N LI
Sbjct: 137 VLGKM--MKLGY-EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIH 193
Query: 164 AL-CKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF 222
L NK + A+ + M RGCQPD +TYGT++NGLC+ G + A L +ME+
Sbjct: 194 GLFLHNKAS--EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKI 251
Query: 223 SPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAME 282
VV YT++I +C N+ +A+ L EM GI PNV TY++L+ LC G A
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 311
Query: 283 LLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFC 342
LL M+ + PN+VT+ LI+ KEGK EA ++ D M + + P+ Y +I+GFC
Sbjct: 312 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
Query: 343 AASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTR 402
+A + + M+ P+ T+ NT+++G C +L+ M R
Sbjct: 372 MHDRLDEAKHMFELMISKDCFPNVVTY-------NTLIKGFCKAKRVEEGMELFREMSQR 424
Query: 403 GISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
G+ T++ LI+ + GD + A +I ++M+SDG PD + +++ GL
Sbjct: 425 GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 210/438 (47%), Gaps = 37/438 (8%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERM----KQENCVVTEDILLTICRGYGRVHR 100
G+ D T +++ + A L+++M Q N V T+ G ++
Sbjct: 145 GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFN----TLIHGLFLHNK 200
Query: 101 PLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNI 160
+A+ + +M + +Y TV++ L + + A++ ++M K I VV
Sbjct: 201 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 260
Query: 161 LIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
+I ALC N + ++ AL +F EM N+G +P+ TY +LI LC G S+A L ++M E+
Sbjct: 261 IIDALC-NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 319
Query: 221 GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQA 280
+P+VVT+++LI + L EA +L +EM K I+P++FTYS+L++G C +A
Sbjct: 320 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 379
Query: 281 MELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISG 340
+ E+M++K PN+VTY TLI G CK + E +E+ M +GL N Y +I G
Sbjct: 380 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 439
Query: 341 FCAASSYQDAANFIDEMVLGGISPSRATWSL----------------------------H 372
A A +MV G+ P T+S+
Sbjct: 440 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
Query: 373 VRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILE 432
+ +N +++G+C + L+ S+ +G+ + + +I FC++G +A +
Sbjct: 500 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFR 559
Query: 433 EMISDGCVPDKGIWDVVM 450
EM DG +P+ G ++ ++
Sbjct: 560 EMKEDGTLPNSGTYNTLI 577
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 180/370 (48%), Gaps = 14/370 (3%)
Query: 49 DHTTFGVMISRLVAANQFRSAEGLLERMKQENC---VVTEDILLTICRGYGRVHRPLDAI 105
D + +I L A L M + VVT + L+ YGR DA
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS---DAS 310
Query: 106 RVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKAL 165
R+ M + ++ ++ +ID V+E + A Y EM K I P + + + LI
Sbjct: 311 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370
Query: 166 CKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPS 225
C + + +D A +F M ++ C P+ TY TLI G C+ V E ELF EM ++G +
Sbjct: 371 CMH-DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGN 429
Query: 226 VVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLE 285
VTY +LI G+ Q+ + A ++ ++M +G+ P++ TYS L+DGLCK G +A+ + E
Sbjct: 430 TVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 489
Query: 286 MMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAAS 345
+ P++ TY +I G+CK GK + ++ + L+G+KPN +Y +ISGFC
Sbjct: 490 YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 549
Query: 346 SYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGIS 405
++A EM G P+ T+ NT+++ + D + +L MR+ G
Sbjct: 550 LKEEADALFREMKEDGTLPNSGTY-------NTLIRARLRDGDKAASAELIKEMRSCGFV 602
Query: 406 IEIDTFDCLI 415
+ T +I
Sbjct: 603 GDASTISMVI 612
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 160/315 (50%), Gaps = 8/315 (2%)
Query: 139 AIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLI 198
A+ + EM + PS+V N L+ A+ K + D + + M N D Y+Y LI
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNK-FDLVISLGERMQNLRISYDLYSYNILI 122
Query: 199 NGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIE 258
N CR + A + +M + G+ P +VT +SL++G C + EA+ L+++M +
Sbjct: 123 NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQ 182
Query: 259 PNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEI 318
PN T++TL+ GL + +A+ L++ MV + +P++ TYGT++NGLCK G A+ +
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 319 LDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNT 378
L +M ++ + +Y II C + DA N EM GI P+ T+ N+
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY-------NS 295
Query: 379 VVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDG 438
+++ LC+ A +L M R I+ + TF LI F K G L +A ++ +EMI
Sbjct: 296 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 355
Query: 439 CVPDKGIWDVVMGGL 453
PD + ++ G
Sbjct: 356 IDPDIFTYSSLINGF 370
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 177/353 (50%), Gaps = 10/353 (2%)
Query: 26 KDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENC---V 82
K++N A+ +F T + G R + T+ +I L ++ A LL M + V
Sbjct: 269 KNVNDALNLF---TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 325
Query: 83 VTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAF 142
VT L+ G++ ++A +++ +M + +Y ++I+ + + A
Sbjct: 326 VTFSALIDAFVKEGKL---VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 143 YREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLC 202
+ M P+VV+ N LIK CK K ++ +++F EM RG ++ TY TLI GL
Sbjct: 383 FELMISKDCFPNVVTYNTLIKGFCKAKR-VEEGMELFREMSQRGLVGNTVTYNTLIQGLF 441
Query: 203 RMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVF 262
+ G A+++F +M G P ++TY+ L+ G+C+ L +A+ + E ++K+ +EP+++
Sbjct: 442 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIY 501
Query: 263 TYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRM 322
TY+ +++G+CK G +L + K +PN++ Y T+I+G C++G EA + M
Sbjct: 502 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM 561
Query: 323 RLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRM 375
+ G PN+G Y +I +A I EM G +T S+ + M
Sbjct: 562 KEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM 614
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 136/271 (50%), Gaps = 7/271 (2%)
Query: 172 IDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTS 231
+D A+ +F EM P + L++ + +M L M+ S + +Y
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 232 LIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKH 291
LI+ C+ L A+ +L +M K G EP++ T S+L++G C G +A+ L++ M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 292 NRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAA 351
+PN VT+ TLI+GL K SEAV ++DRM +G +P+ YG +++G C A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 352 NFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTF 411
+ + +M G I V ++ T++ LC+ + A L+ M +GI + T+
Sbjct: 241 SLLKKMEKGKIEAD-------VVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 412 DCLIKCFCKRGDLNKAARILEEMISDGCVPD 442
+ LI+C C G + A+R+L +MI P+
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPN 324
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 133/311 (42%), Gaps = 41/311 (13%)
Query: 10 PKQIT-SSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRS 68
P +T S+L++ +K E + +A ++D D T+ +I+ ++
Sbjct: 323 PNVVTFSALIDAFVK-EGKLVEAEKLYDEMIKR---SIDPDIFTYSSLINGFCMHDRLDE 378
Query: 69 AEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVID 128
A+ + E M ++C T+ +G+ + R + + +F +M L +Y T+I
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Query: 129 ILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQ 188
L + A +++M G+PP +++ +IL+ LCK + ++ AL +F + +
Sbjct: 439 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK-LEKALVVFEYLQKSKME 497
Query: 189 PDSYTYG-----------------------------------TLINGLCRMGSVSEAKEL 213
PD YTY T+I+G CR G EA L
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 557
Query: 214 FNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCK 273
F EM+E G P+ TY +LI + + + L++EM+ G + T S +++ L
Sbjct: 558 FREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHD 617
Query: 274 GGHSLQAMELL 284
G +E+L
Sbjct: 618 GRLEKSYLEML 628
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/429 (28%), Positives = 218/429 (50%), Gaps = 19/429 (4%)
Query: 26 KDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENC---V 82
K I++AV + D + G++ + TF +I L N+ A L++RM + C +
Sbjct: 165 KRISEAVALVDQM---FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDL 221
Query: 83 VTEDILLT-ICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIA 141
VT +++ +C+ R L A + +KME +L+ Y T+ID L + H+ A+
Sbjct: 222 VTYGVVVNGLCK---RGDTDL-AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALN 277
Query: 142 FYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGL 201
++EM GI P+VV+ + LI LC D++ ++ +M R PD +T+ LI+
Sbjct: 278 LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS-RLLSDMIERKINPDVFTFSALIDAF 336
Query: 202 CRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNV 261
+ G + EA++L++EM ++ PS+VTY+SLI+G C D L EA ++ E M P+V
Sbjct: 337 VKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDV 396
Query: 262 FTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDR 321
TY+TL+ G CK + ME+ M + N VTY LI GL + G A EI
Sbjct: 397 VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 456
Query: 322 MRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQ 381
M G+ PN Y ++ G C + A + + + P+ T+ N +++
Sbjct: 457 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY-------NIMIE 509
Query: 382 GLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVP 441
G+C + L+ ++ +G+ ++ ++ +I FC++G +A + +EM DG +P
Sbjct: 510 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 569
Query: 442 DKGIWDVVM 450
+ G ++ ++
Sbjct: 570 NSGCYNTLI 578
Score = 192 bits (488), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 219/449 (48%), Gaps = 16/449 (3%)
Query: 16 SLVE--QLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLL 73
S++E +L+ A +NK ++ + G H+H T+ ++I+ +Q A +L
Sbjct: 80 SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVL 139
Query: 74 ERMKQ---ENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDIL 130
+M + E +VT L ++ GY R +A+ + +M + ++ T+I L
Sbjct: 140 GKMMKLGYEPNIVT---LSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGL 196
Query: 131 VEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPD 190
N A+A M G P +V+ +++ LCK +T D A + ++M +P
Sbjct: 197 FLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT-DLAFNLLNKMEQGKLEPG 255
Query: 191 SYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLE 250
Y T+I+GLC+ + +A LF EME KG P+VVTY+SLI +C +A RLL
Sbjct: 256 VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 315
Query: 251 EMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEG 310
+M + I P+VFT+S L+D K G ++A +L + MV + P++VTY +LING C
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 375
Query: 311 KFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWS 370
+ EA ++ + M + P+ Y +I GFC ++ EM G+ + T+
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY- 434
Query: 371 LHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARI 430
N ++QGL D A +++ M + G+ I T++ L+ CK G L KA +
Sbjct: 435 ------NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVV 488
Query: 431 LEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
E + P +++++ G+ KV
Sbjct: 489 FEYLQRSKMEPTIYTYNIMIEGMCKAGKV 517
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 117/378 (30%), Positives = 187/378 (49%), Gaps = 15/378 (3%)
Query: 53 FGVMISRLVAANQFRSAEGLLERMKQENC---VVTEDILLTICRGYGRVHRPLDAIRVFH 109
+ +I L A L + M+ + VVT L++ YGR DA R+
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWS---DASRLLS 315
Query: 110 KMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNK 169
M + ++ ++ +ID V+E + A Y EM K I PS+V+ + LI C +
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH- 374
Query: 170 ETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTY 229
+ +D A Q+F M ++ C PD TY TLI G C+ V E E+F EM ++G + VTY
Sbjct: 375 DRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 434
Query: 230 TSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVT 289
LI G+ Q+ + A + +EM +G+ PN+ TY+TL+DGLCK G +AM + E +
Sbjct: 435 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Query: 290 KHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQD 349
P + TY +I G+CK GK + ++ + L+G+KP+ Y +ISGFC S ++
Sbjct: 495 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 554
Query: 350 AANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEID 409
A EM G P+ + NT+++ + D + +L MR+ G + +
Sbjct: 555 ADALFKEMKEDGTLPNSGCY-------NTLIRARLRDGDREASAELIKEMRSCGFAGDAS 607
Query: 410 TFDCLIKCFCKRGDLNKA 427
T L+ G L+K+
Sbjct: 608 TIG-LVTNMLHDGRLDKS 624
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 103/323 (31%), Positives = 168/323 (52%), Gaps = 8/323 (2%)
Query: 131 VEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPD 190
+ E + A+A + EM K PS++ + L+ A+ K + D + + +M N G +
Sbjct: 57 LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNK-FDVVISLGEQMQNLGIPHN 115
Query: 191 SYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLE 250
YTY LIN CR + A + +M + G+ P++VT +SL++G C S + EA+ L++
Sbjct: 116 HYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVD 175
Query: 251 EMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEG 310
+M G +PN T++TL+ GL + +AM L++ MV K +P++VTYG ++NGLCK G
Sbjct: 176 QMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG 235
Query: 311 KFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWS 370
A +L++M L+P +Y II G C DA N EM GI P+ T+S
Sbjct: 236 DTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 295
Query: 371 LHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARI 430
+++ LC+ A +L M R I+ ++ TF LI F K G L +A ++
Sbjct: 296 -------SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 348
Query: 431 LEEMISDGCVPDKGIWDVVMGGL 453
+EM+ P + ++ G
Sbjct: 349 YDEMVKRSIDPSIVTYSSLINGF 371
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 126/256 (49%), Gaps = 1/256 (0%)
Query: 51 TTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHK 110
T+ +I+ ++ A+ + E M ++C T+ +G+ + R + + VF +
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 111 MEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKE 170
M L +Y +I L + A ++EM G+PP++++ N L+ LCKN +
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Query: 171 TIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYT 230
++ A+ +F + +P YTY +I G+C+ G V + +LF + KG P VV Y
Sbjct: 482 -LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540
Query: 231 SLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTK 290
++I G C+ + EA L +EMK++G PN Y+TL+ + G + EL++ M +
Sbjct: 541 TMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSC 600
Query: 291 HNRPNMVTYGTLINGL 306
+ T G + N L
Sbjct: 601 GFAGDASTIGLVTNML 616
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 134/452 (29%), Positives = 209/452 (46%), Gaps = 49/452 (10%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENC----VVTEDILLTICRGYGRVHR 100
G+ D TTF +I L + A L++RM + C V I+ ICR G
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRS-GDTSL 211
Query: 101 PLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNI 160
LD +R KME+ +K +Y T+ID L + + AI+ ++EM GI SVV+ N
Sbjct: 212 ALDLLR---KMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNS 268
Query: 161 LIKALCKNKETIDSAL----------------------------------QIFHEMPNRG 186
L++ LCK + D AL +++ EM RG
Sbjct: 269 LVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328
Query: 187 CQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAI 246
P+ TY TL++G C +SEA + + M SP +VT+TSLI G C + + +
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 247 RLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGL 306
++ + K G+ N TYS L+ G C+ G A EL + MV+ P+++TYG L++GL
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Query: 307 CKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSR 366
C GK +A+EI + ++ + +Y II G C +DA N + G+ P+
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 508
Query: 367 ATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNK 426
T+++ ++ GLC A L M G + T++ LI+ + GDL
Sbjct: 509 MTYTV-------MISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTA 561
Query: 427 AARILEEMISDGCVPDKGIWDVVMGGLWDRKK 458
+A+++EEM S G D +V+ L K
Sbjct: 562 SAKLIEEMKSCGFSADASSIKMVIDMLLSAMK 593
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 172/321 (53%), Gaps = 8/321 (2%)
Query: 139 AIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLI 198
A + ++ K+G P + N LIK L + + A+ + M GCQPD TY +++
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGK-VSEAVVLVDRMVENGCQPDVVTYNSIV 200
Query: 199 NGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIE 258
NG+CR G S A +L +MEE+ V TY+++I +C+ + AI L +EM+ GI+
Sbjct: 201 NGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIK 260
Query: 259 PNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEI 318
+V TY++L+ GLCK G LL+ MV++ PN++T+ L++ KEGK EA E+
Sbjct: 261 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 320
Query: 319 LDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNT 378
M +G+ PN Y ++ G+C + +A N +D MV SP T++ +
Sbjct: 321 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFT-------S 373
Query: 379 VVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDG 438
+++G C +++ ++ RG+ T+ L++ FC+ G + A + +EM+S G
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 439 CVPDKGIWDVVMGGLWDRKKV 459
+PD + +++ GL D K+
Sbjct: 434 VLPDVMTYGILLDGLCDNGKL 454
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 183/397 (46%), Gaps = 43/397 (10%)
Query: 95 YGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPS 154
+ R + A V K+ + ++ T+I L E V A+ M + G P
Sbjct: 133 FCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPD 192
Query: 155 VVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELF 214
VV+ N ++ +C++ +T AL + +M R + D +TY T+I+ LCR G + A LF
Sbjct: 193 VVTYNSIVNGICRSGDT-SLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 215 NEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKG 274
EME KG SVVTY SL+ G+C++ + LL++M I PNV T++ L+D K
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311
Query: 275 GHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRM------------ 322
G +A EL + M+T+ PN++TY TL++G C + + SEA +LD M
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371
Query: 323 -----------------------RLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVL 359
+GL NA Y ++ GFC + + A EMV
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431
Query: 360 GGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFC 419
G+ P T+ + ++ GLC N +A +++ ++ + + I + +I+ C
Sbjct: 432 HGVLPDVMTYGI-------LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484
Query: 420 KRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDR 456
K G + A + + G P+ + V++ GL +
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 521
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 179/364 (49%), Gaps = 11/364 (3%)
Query: 15 SSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLE 74
S++++ L + + I+ A+ +F + G + T+ ++ L A ++ LL+
Sbjct: 232 STIIDSLCR-DGCIDAAISLFKEMETK---GIKSSVVTYNSLVRGLCKAGKWNDGALLLK 287
Query: 75 RMKQENCV---VTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILV 131
M V +T ++LL + G++ +A ++ +M + +Y T++D
Sbjct: 288 DMVSREIVPNVITFNVLLDVFVKEGKLQ---EANELYKEMITRGISPNIITYNTLMDGYC 344
Query: 132 EENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDS 191
+N + A M + P +V+ LIK C K +D +++F + RG ++
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR-VDDGMKVFRNISKRGLVANA 403
Query: 192 YTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEE 251
TY L+ G C+ G + A+ELF EM G P V+TY L+ G+C + L +A+ + E+
Sbjct: 404 VTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFED 463
Query: 252 MKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGK 311
++K+ ++ + Y+T+++G+CKGG A L + K +PN++TY +I+GLCK+G
Sbjct: 464 LQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 523
Query: 312 FSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSL 371
SEA +L +M G PN Y +I +A I+EM G S ++ +
Sbjct: 524 LSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKM 583
Query: 372 HVRM 375
+ M
Sbjct: 584 VIDM 587
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 164/332 (49%), Gaps = 9/332 (2%)
Query: 15 SSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLE 74
+SLV L KA K + A+L+ D + E + TF V++ V + + A L +
Sbjct: 267 NSLVRGLCKAGKWNDGALLLKDMVSRE----IVPNVITFNVLLDVFVKEGKLQEANELYK 322
Query: 75 RMKQENCVVTEDILL--TICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVE 132
M ++ +I+ T+ GY +R +A + M + ++ ++I
Sbjct: 323 EMITRG--ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 380
Query: 133 ENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSY 192
V + +R + K G+ + V+ +IL++ C++ + I A ++F EM + G PD
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK-IKLAEELFQEMVSHGVLPDVM 439
Query: 193 TYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEM 252
TYG L++GLC G + +A E+F ++++ +V YT++I GMC+ + +A L +
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499
Query: 253 KKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKF 312
G++PNV TY+ ++ GLCK G +A LL M N PN TY TLI ++G
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 559
Query: 313 SEAVEILDRMRLQGLKPNAGLYGKIISGFCAA 344
+ + ++++ M+ G +A +I +A
Sbjct: 560 TASAKLIEEMKSCGFSADASSIKMVIDMLLSA 591
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 134/280 (47%), Gaps = 7/280 (2%)
Query: 173 DSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSL 232
D A+ +F EM P + + + R + + ++E G + ++ T +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 233 IHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHN 292
I+ C+ A +L ++ K G EP+ T++TL+ GL G +A+ L++ MV
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 293 RPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAAN 352
+P++VTY +++NG+C+ G S A+++L +M + +K + Y II C A +
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 353 FIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFD 412
EM GI S T+ N++V+GLC L M +R I + TF+
Sbjct: 250 LFKEMETKGIKSSVVTY-------NSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 302
Query: 413 CLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGG 452
L+ F K G L +A + +EMI+ G P+ ++ +M G
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDG 342
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 208/417 (49%), Gaps = 8/417 (1%)
Query: 43 SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPL 102
S G H T +MI+ + A + ++ + I T+ G R
Sbjct: 116 SKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVS 175
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
+A+ + +M + K T + T+++ L V A+ M + G P+ V+ ++
Sbjct: 176 EALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVL 235
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF 222
+CK+ +T A+++ +M R + D+ Y +I+GLC+ GS+ A LFNEME KGF
Sbjct: 236 NVMCKSGQTA-LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 294
Query: 223 SPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAME 282
++TY +LI G C + + +LL +M K I PNV T+S L+D K G +A +
Sbjct: 295 KADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQ 354
Query: 283 LLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFC 342
LL+ M+ + PN +TY +LI+G CKE + EA++++D M +G P+ + +I+G+C
Sbjct: 355 LLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYC 414
Query: 343 AASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTR 402
A+ D EM L G+ + T+ NT+VQG C + A +L+ M +R
Sbjct: 415 KANRIDDGLELFREMSLRGVIANTVTY-------NTLVQGFCQSGKLEVAKKLFQEMVSR 467
Query: 403 GISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
+ +I ++ L+ C G+L KA I ++ D GI+ +++ G+ + KV
Sbjct: 468 RVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKV 524
Score = 195 bits (496), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 215/434 (49%), Gaps = 29/434 (6%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
G+ D F +++ L + A L++RM + T L T+ G + DA
Sbjct: 153 GYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDA 212
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
+ + +M + + + +Y V++++ + A+ R+M + I V +I+I
Sbjct: 213 VVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
LCK+ ++D+A +F+EM +G + D TY TLI G C G + +L +M ++ SP
Sbjct: 273 LCKDG-SLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISP 331
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
+VVT++ LI + L EA +LL+EM + GI PN TY++L+DG CK +A++++
Sbjct: 332 NVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMV 391
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAA 344
++M++K P+++T+ LING CK + + +E+ M L+G+ N Y ++ GFC +
Sbjct: 392 DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQS 451
Query: 345 SSYQDAANFIDEMVLGGISPSRATW----------------------------SLHVRMH 376
+ A EMV + P ++ L + ++
Sbjct: 452 GKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIY 511
Query: 377 NTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMIS 436
++ G+C+ A+ L+ S+ +G+ ++ ++ +I C++ L+KA + +M
Sbjct: 512 MIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTE 571
Query: 437 DGCVPDKGIWDVVM 450
+G PD+ +++++
Sbjct: 572 EGHAPDELTYNILI 585
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 210/426 (49%), Gaps = 11/426 (2%)
Query: 28 INKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDI 87
++ AV++ D GF+ + T+G +++ + + Q A LL +M++ N +
Sbjct: 209 VSDAVVLIDRMV---ETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 88 LLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMR 147
I G + +A +F++ME K +Y T+I R+M
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 148 KMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSV 207
K I P+VV+ ++LI + K + + A Q+ EM RG P++ TY +LI+G C+ +
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGK-LREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRL 384
Query: 208 SEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTL 267
EA ++ + M KG P ++T+ LI+G C+++ + + + L EM G+ N TY+TL
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444
Query: 268 MDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGL 327
+ G C+ G A +L + MV++ RP++V+Y L++GLC G+ +A+EI ++ +
Sbjct: 445 VQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKM 504
Query: 328 KPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNV 387
+ + G+Y II G C AS DA + + L G+ L R +N ++ LC
Sbjct: 505 ELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGV-------KLDARAYNIMISELCRKD 557
Query: 388 DSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWD 447
+A L+ M G + + T++ LI+ D AA ++EEM S G D
Sbjct: 558 SLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVK 617
Query: 448 VVMGGL 453
+V+ L
Sbjct: 618 MVINML 623
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 177/354 (50%), Gaps = 13/354 (3%)
Query: 106 RVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKAL 165
R F D L + K ++ I ++ A+ +R+M + P+V+ N L A+
Sbjct: 44 RGFSTFSDRNLSYRDKLSSGLVGIKADD-----AVDLFRDMIQSRPLPTVIDFNRLFSAI 98
Query: 166 CKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPS 225
K K+ + L + +M ++G YT +IN CR +S A ++ + G+ P
Sbjct: 99 AKTKQ-YELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPD 157
Query: 226 VVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLE 285
V + +L++G+C + EA+ L++ M + G +P + T +TL++GLC G A+ L++
Sbjct: 158 TVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLID 217
Query: 286 MMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAAS 345
MV +PN VTYG ++N +CK G+ + A+E+L +M + +K +A Y II G C
Sbjct: 218 RMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDG 277
Query: 346 SYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGIS 405
S +A N +EM + G T+ NT++ G C+ +L M R IS
Sbjct: 278 SLDNAFNLFNEMEIKGFKADIITY-------NTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 406 IEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
+ TF LI F K G L +A ++L+EM+ G P+ ++ ++ G ++
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRL 384
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 140/288 (48%), Gaps = 7/288 (2%)
Query: 173 DSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSL 232
D A+ +F +M P + L + + + L +ME KG + S+ T + +
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 233 IHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHN 292
I+ C+ L A + ++ K G EP+ ++TL++GLC +A+EL++ MV +
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 293 RPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAAN 352
+P ++T TL+NGLC GK S+AV ++DRM G +PN YG +++ C + A
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 353 FIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFD 412
+ +M I +S+ ++ GLC + AF L+ M +G +I T++
Sbjct: 250 LLRKMEERNIKLDAVKYSI-------IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYN 302
Query: 413 CLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKVR 460
LI FC G + A++L +MI P+ + V++ K+R
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLR 350
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 128/266 (48%), Gaps = 6/266 (2%)
Query: 10 PKQIT-SSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRS 68
P IT +SL++ K E + +A+ M D S G D TF ++I+ AN+
Sbjct: 366 PNTITYNSLIDGFCK-ENRLEEAIQMVDLMI---SKGCDPDIMTFNILINGYCKANRIDD 421
Query: 69 AEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVID 128
L M + T+ +G+ + + A ++F +M +++ SY ++D
Sbjct: 422 GLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLD 481
Query: 129 ILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQ 188
L + +++A+ + ++ K + + I+I +C N +D A +F +P +G +
Sbjct: 482 GLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMC-NASKVDDAWDLFCSLPLKGVK 540
Query: 189 PDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRL 248
D+ Y +I+ LCR S+S+A LF +M E+G +P +TY LI D+ A L
Sbjct: 541 LDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAEL 600
Query: 249 LEEMKKNGIEPNVFTYSTLMDGLCKG 274
+EEMK +G +V T +++ L G
Sbjct: 601 IEEMKSSGFPADVSTVKMVINMLSSG 626
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/468 (26%), Positives = 217/468 (46%), Gaps = 62/468 (13%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
G H+ T+ +MI+ L +Q A +L +M + + L ++ G+ +R +A
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
+ + +M + + ++ T++ L + N A+A M G P +V+ +I
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 214
Query: 165 LCKNKET----------------------------------IDSALQIFHEMPNRGCQPD 190
LCK E +D AL +F EM N+G +PD
Sbjct: 215 LCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPD 274
Query: 191 SYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLE 250
+TY +LI+ LC G S+A L ++M E+ +P+VVT+ SLI + L EA +L +
Sbjct: 275 VFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 334
Query: 251 EMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEG 310
EM + I+PN+ TY++L++G C +A ++ +MV+K P++VTY TLING CK
Sbjct: 335 EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAK 394
Query: 311 KFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWS 370
K + +E+ M +GL N Y +I GF AS +A +MV G+ P+ T++
Sbjct: 395 KVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYN 454
Query: 371 L----------------------------HVRMHNTVVQGLCSNVDSPRAFQLYLSMRTR 402
+ +N + +G+C + L+ S+ +
Sbjct: 455 TLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLK 514
Query: 403 GISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVM 450
G+ ++ ++ +I FCK+G +A + +M DG +PD G ++ ++
Sbjct: 515 GVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLI 562
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 214/463 (46%), Gaps = 46/463 (9%)
Query: 28 INKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDI 87
I++AV + D G++ D TF ++ L N+ A L+ERM + C
Sbjct: 151 ISEAVALVDQMV---EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVT 207
Query: 88 LLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMR 147
+ G + P A+ + +KME +++ Y TVID L + HV A+ + EM
Sbjct: 208 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMD 267
Query: 148 KMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSV 207
GI P V + + LI LC D++ ++ +M R P+ T+ +LI+ + G +
Sbjct: 268 NKGIRPDVFTYSSLISCLCNYGRWSDAS-RLLSDMLERKINPNVVTFNSLIDAFAKEGKL 326
Query: 208 SEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTL 267
EA++LF+EM ++ P++VTY SLI+G C D L EA ++ M P+V TY+TL
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 386
Query: 268 MDGLCKGGHSLQAMELL-----------------------------------EMMVTKHN 292
++G CK + MEL + MV+
Sbjct: 387 INGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV 446
Query: 293 RPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAAN 352
PN++TY TL++GLCK GK +A+ + + ++ ++P+ Y + G C A +D +
Sbjct: 447 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWD 506
Query: 353 FIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFD 412
+ L G+ P V +NT++ G C A+ L++ M+ G + T++
Sbjct: 507 LFCSLSLKGVKPD-------VIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYN 559
Query: 413 CLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWD 455
LI+ + GD +A +++EM S D + +V L D
Sbjct: 560 TLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHD 602
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 164/326 (50%), Gaps = 8/326 (2%)
Query: 134 NHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYT 193
N + A+A +M +MG P V+ L+ L ++ + A+ + M +GCQPD T
Sbjct: 149 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKA-SEAVALVERMVVKGCQPDLVT 207
Query: 194 YGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMK 253
YG +INGLC+ G A L N+ME+ VV Y+++I +C+ ++ +A+ L EM
Sbjct: 208 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMD 267
Query: 254 KNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFS 313
GI P+VFTYS+L+ LC G A LL M+ + PN+VT+ +LI+ KEGK
Sbjct: 268 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLI 327
Query: 314 EAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHV 373
EA ++ D M + + PN Y +I+GFC +A MV P T+
Sbjct: 328 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY---- 383
Query: 374 RMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEE 433
NT++ G C +L+ M RG+ T+ LI F + D + A + ++
Sbjct: 384 ---NTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQ 440
Query: 434 MISDGCVPDKGIWDVVMGGLWDRKKV 459
M+SDG P+ ++ ++ GL K+
Sbjct: 441 MVSDGVHPNIMTYNTLLDGLCKNGKL 466
Score = 171 bits (433), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 171/321 (53%), Gaps = 10/321 (3%)
Query: 135 HVK--RAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSY 192
H+K A+ + EM K PS+V + L+ A+ K K+ D + +M G + Y
Sbjct: 43 HLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKK-FDLVISFGEKMEILGVSHNLY 101
Query: 193 TYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEM 252
TY +IN LCR +S A + +M + G+ PS+VT SL++G C + + EA+ L+++M
Sbjct: 102 TYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161
Query: 253 KKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKF 312
+ G +P+ T++TL+ GL + + +A+ L+E MV K +P++VTYG +INGLCK G+
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221
Query: 313 SEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLH 372
A+ +L++M ++ + +Y +I C DA N EM GI P T+S
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYS-- 279
Query: 373 VRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILE 432
+++ LC+ A +L M R I+ + TF+ LI F K G L +A ++ +
Sbjct: 280 -----SLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 334
Query: 433 EMISDGCVPDKGIWDVVMGGL 453
EMI P+ ++ ++ G
Sbjct: 335 EMIQRSIDPNIVTYNSLINGF 355
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 133/270 (49%), Gaps = 3/270 (1%)
Query: 51 TTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHK 110
T+ +I+ ++ A+ + M ++C+ T+ G+ + + +D + +F
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405
Query: 111 MEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKE 170
M L +Y T+I + + A +++M G+ P++++ N L+ LCKN +
Sbjct: 406 MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465
Query: 171 TIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYT 230
++ A+ +F + +PD YTY + G+C+ G V + +LF + KG P V+ Y
Sbjct: 466 -LEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYN 524
Query: 231 SLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTK 290
++I G C+ EA L +MK++G P+ TY+TL+ + G + EL++ M +
Sbjct: 525 TMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSC 584
Query: 291 HNRPNMVTYGTLINGLCKEGKFSEA-VEIL 319
+ TYG L+ + +G+ + +E+L
Sbjct: 585 RFAGDASTYG-LVTDMLHDGRLDKGFLEVL 613
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 196/377 (51%), Gaps = 12/377 (3%)
Query: 79 ENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKR 138
+N V I + Y R F + + K + S ++ L++EN
Sbjct: 147 DNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSAD 206
Query: 139 AIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLI 198
Y+EM + I P+V + N++I ALCK + ++ A + +M GC P+ +Y TLI
Sbjct: 207 VEYVYKEMIRRKIQPNVFTFNVVINALCKTGK-MNKARDVMEDMKVYGCSPNVVSYNTLI 265
Query: 199 NGLCRMGS---VSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKN 255
+G C++G + +A + EM E SP++ T+ LI G + DNL ++++ +EM
Sbjct: 266 DGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ 325
Query: 256 GIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEA 315
++PNV +Y++L++GLC GG +A+ + + MV+ +PN++TY LING CK EA
Sbjct: 326 DVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEA 385
Query: 316 VEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRM 375
+++ ++ QG P +Y +I +C D +EM GI P T+
Sbjct: 386 LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTY------ 439
Query: 376 HNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMI 435
N ++ GLC N + A +L+ + ++G+ ++ TF L++ +C++G+ KAA +L+EM
Sbjct: 440 -NCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMS 497
Query: 436 SDGCVPDKGIWDVVMGG 452
G P +++VM G
Sbjct: 498 KMGLKPRHLTYNIVMKG 514
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 115/452 (25%), Positives = 224/452 (49%), Gaps = 21/452 (4%)
Query: 13 ITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAE-- 70
+ S + + L+ A + ++ L F++ G++ + ++ L+ N+ E
Sbjct: 151 VNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYV 210
Query: 71 --GLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVID 128
++ R Q N ++ +C+ G++++ D V M+ + SY T+ID
Sbjct: 211 YKEMIRRKIQPNVFTFNVVINALCKT-GKMNKARD---VMEDMKVYGCSPNVVSYNTLID 266
Query: 129 ---ILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR 185
L + +A A +EM + + P++ + NILI K+ + + ++++F EM ++
Sbjct: 267 GYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKD-DNLPGSMKVFKEMLDQ 325
Query: 186 GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEA 245
+P+ +Y +LINGLC G +SEA + ++M G P+++TY +LI+G C++D L EA
Sbjct: 326 DVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEA 385
Query: 246 IRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING 305
+ + +K G P Y+ L+D CK G L E M + P++ TY LI G
Sbjct: 386 LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPS 365
LC+ G A ++ D++ +GL P+ + ++ G+C + AA + EM G+ P
Sbjct: 446 LCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPR 504
Query: 366 RATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSM-RTRGISIEIDTFDCLIKCFCKRGDL 424
T+ N V++G C + A + M + R + + + +++ L++ + ++G L
Sbjct: 505 HLTY-------NIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKL 557
Query: 425 NKAARILEEMISDGCVPDKGIWDVVMGGLWDR 456
A +L EM+ G VP++ +++V + D+
Sbjct: 558 EDANMLLNEMLEKGLVPNRITYEIVKEEMVDQ 589
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 74/161 (45%), Gaps = 10/161 (6%)
Query: 302 LINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGG 361
L+ L KE + ++ + M + ++PN + +I+ C A + +++M + G
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 362 ISPSRATWSLHVRMHNTVVQGLC---SNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCF 418
SP+ ++ NT++ G C N +A + M +S + TF+ LI F
Sbjct: 254 CSPNVVSY-------NTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGF 306
Query: 419 CKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
K +L + ++ +EM+ P+ ++ ++ GL + K+
Sbjct: 307 WKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKI 347
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 213/430 (49%), Gaps = 12/430 (2%)
Query: 26 KDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTE 85
KD++ A +F+ + G R + + +I L A + A L +MK + C T
Sbjct: 267 KDLDSAFKVFNEMPLK---GCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTV 323
Query: 86 DILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYRE 145
+ + R +A+ + +ME+ +K +Y +ID L + ++A +
Sbjct: 324 RTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQ 383
Query: 146 MRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMG 205
M + G+ P+V++ N LI CK + I+ A+ + M +R P++ TY LI G C+
Sbjct: 384 MLEKGLMPNVITYNALINGYCK-RGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-S 441
Query: 206 SVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYS 265
+V +A + N+M E+ P VVTY SLI G C+S N A RLL M G+ P+ +TY+
Sbjct: 442 NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYT 501
Query: 266 TLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQ 325
+++D LCK +A +L + + K PN+V Y LI+G CK GK EA +L++M +
Sbjct: 502 SMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSK 561
Query: 326 GLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCS 385
PN+ + +I G CA ++A ++MV G+ P+ +T ++ ++ L
Sbjct: 562 NCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTI-------LIHRLLK 614
Query: 386 NVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGI 445
+ D A+ + M + G + T+ I+ +C+ G L A ++ +M +G PD
Sbjct: 615 DGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFT 674
Query: 446 WDVVMGGLWD 455
+ ++ G D
Sbjct: 675 YSSLIKGYGD 684
Score = 188 bits (478), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 191/354 (53%), Gaps = 30/354 (8%)
Query: 135 HVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTY 194
+V+ A + ++ + G+ P + LI C+ K+ +DSA ++F+EMP +GC+ + Y
Sbjct: 233 NVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKD-LDSAFKVFNEMPLKGCRRNEVAY 291
Query: 195 GTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKK 254
LI+GLC + EA +LF +M++ P+V TYT LI +C S+ EA+ L++EM++
Sbjct: 292 THLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEE 351
Query: 255 NGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSE 314
GI+PN+ TY+ L+D LC +A ELL M+ K PN++TY LING CK G +
Sbjct: 352 TGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIED 411
Query: 315 AVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVR 374
AV++++ M + L PN Y ++I G+C ++ ++ A +++M+ + P T++ +
Sbjct: 412 AVDVVELMESRKLSPNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVVTYNSLID 470
Query: 375 ----------------------------MHNTVVQGLCSNVDSPRAFQLYLSMRTRGISI 406
+ +++ LC + A L+ S+ +G++
Sbjct: 471 GQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNP 530
Query: 407 EIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKVR 460
+ + LI +CK G +++A +LE+M+S C+P+ ++ ++ GL K++
Sbjct: 531 NVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLK 584
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/402 (28%), Positives = 196/402 (48%), Gaps = 9/402 (2%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
G D T+ +I SA + M + C E + G R +A
Sbjct: 248 GLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEA 307
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
+ +F KM+D + T ++Y +I L A+ +EM + GI P++ + +LI +
Sbjct: 308 MDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDS 367
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
LC ++ + A ++ +M +G P+ TY LING C+ G + +A ++ ME + SP
Sbjct: 368 LC-SQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSP 426
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
+ TY LI G C+S N+ +A+ +L +M + + P+V TY++L+DG C+ G+ A LL
Sbjct: 427 NTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAA 344
+M + P+ TY ++I+ LCK + EA ++ D + +G+ PN +Y +I G+C A
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA 545
Query: 345 SSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGI 404
+A +++M+ P+ T+ N ++ GLC++ A L M G+
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTF-------NALIHGLCADGKLKEATLLEEKMVKIGL 598
Query: 405 SIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIW 446
+ T LI K GD + A ++M+S G PD +
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTY 640
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 127/497 (25%), Positives = 220/497 (44%), Gaps = 90/497 (18%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENC---VVTEDILLTICRGYGRVHRP 101
G + + T+ V+I L + +F A LL +M ++ V+T + L+ GY +
Sbjct: 353 GIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALIN---GYCKRGMI 409
Query: 102 LDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNIL 161
DA+ V ME +L ++Y +I + N V +A+ +M + + P VV+ N L
Sbjct: 410 EDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSL 468
Query: 162 IKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKG 221
I C++ DSA ++ M +RG PD +TY ++I+ LC+ V EA +LF+ +E+KG
Sbjct: 469 IDGQCRSG-NFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG 527
Query: 222 FSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAM 281
+P+VV YT+LI G C++ + EA +LE+M PN T++ L+ GLC G +A
Sbjct: 528 VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEAT 587
Query: 282 ELLEMMV-----------------------------------TKHNRPNMVTYGTLINGL 306
L E MV + +P+ TY T I
Sbjct: 588 LLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTY 647
Query: 307 CKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSR 366
C+EG+ +A +++ +MR G+ P+ Y +I G+ A + + M G PS+
Sbjct: 648 CREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQ 707
Query: 367 ATW----------------------------------------------SLHVRMHNTVV 380
T+ + + + + ++
Sbjct: 708 HTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLI 767
Query: 381 QGLCSNVDSPRAFQLYLSM-RTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGC 439
G+C + A +++ M R GIS F+ L+ C CK N+AA+++++MI G
Sbjct: 768 LGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGH 827
Query: 440 VPDKGIWDVVMGGLWDR 456
+P V++ GL+ +
Sbjct: 828 LPQLESCKVLICGLYKK 844
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 154/324 (47%), Gaps = 45/324 (13%)
Query: 172 IDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTS 231
+D Q++ EM P+ YTY ++NG C++G+V EA + +++ E G P TYTS
Sbjct: 199 VDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTS 258
Query: 232 LIHGMCQSDNLGEAIRLLEEMKKNGIE--------------------------------- 258
LI G CQ +L A ++ EM G
Sbjct: 259 LIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDE 318
Query: 259 --PNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAV 316
P V TY+ L+ LC +A+ L++ M +PN+ TY LI+ LC + KF +A
Sbjct: 319 CFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAR 378
Query: 317 EILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMH 376
E+L +M +GL PN Y +I+G+C +DA + ++ M +SP + R +
Sbjct: 379 ELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSP-------NTRTY 431
Query: 377 NTVVQGLC-SNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMI 435
N +++G C SNV +A + M R + ++ T++ LI C+ G+ + A R+L M
Sbjct: 432 NELIKGYCKSNVH--KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMN 489
Query: 436 SDGCVPDKGIWDVVMGGLWDRKKV 459
G VPD+ + ++ L K+V
Sbjct: 490 DRGLVPDQWTYTSMIDSLCKSKRV 513
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 134/259 (51%), Gaps = 7/259 (2%)
Query: 194 YGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMK 253
Y TL+N L R G V E K+++ EM E P++ TY +++G C+ N+ EA + + ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 254 KNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFS 313
+ G++P+ FTY++L+ G C+ A ++ M K R N V Y LI+GLC +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 314 EAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHV 373
EA+++ +M+ P Y +I C + +A N + EM GI P+ T+++
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV-- 363
Query: 374 RMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEE 433
++ LCS +A +L M +G+ + T++ LI +CKRG + A ++E
Sbjct: 364 -----LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVEL 418
Query: 434 MISDGCVPDKGIWDVVMGG 452
M S P+ ++ ++ G
Sbjct: 419 MESRKLSPNTRTYNELIKG 437
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 162/385 (42%), Gaps = 42/385 (10%)
Query: 15 SSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLE 74
++L++ KA K +++A LM + S + TF +I L A + + A L E
Sbjct: 536 TALIDGYCKAGK-VDEAHLMLEKML---SKNCLPNSLTFNALIHGLCADGKLKEATLLEE 591
Query: 75 RMKQ---ENCVVTEDILLTICRGYGRVHRPLD------AIRVFHKMEDFQLKFTQKSYLT 125
+M + + V T+ IL +HR L A F +M K +Y T
Sbjct: 592 KMVKIGLQPTVSTDTIL---------IHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTT 642
Query: 126 VIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR 185
I E + A +MR+ G+ P + + + LIK +T + A + M +
Sbjct: 643 FIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQT-NFAFDVLKRMRDT 701
Query: 186 GCQPDSYTYGTLINGL---------------CRMGSVSE---AKELFNEMEEKGFSPSVV 227
GC+P +T+ +LI L C M ++ E EL +M E +P+
Sbjct: 702 GCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAK 761
Query: 228 TYTSLIHGMCQSDNLGEAIRLLEEMKKN-GIEPNVFTYSTLMDGLCKGGHSLQAMELLEM 286
+Y LI G+C+ NL A ++ + M++N GI P+ ++ L+ CK +A ++++
Sbjct: 762 SYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDD 821
Query: 287 MVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASS 346
M+ + P + + LI GL K+G+ + + G + + II G
Sbjct: 822 MICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGL 881
Query: 347 YQDAANFIDEMVLGGISPSRATWSL 371
+ + M G S T+SL
Sbjct: 882 VEAFYELFNVMEKNGCKFSSQTYSL 906
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 148/313 (47%), Gaps = 27/313 (8%)
Query: 35 FDSATAEY----SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILL- 89
FD A + + S+G + D T+ I + AE ++ +M++ V+ D+
Sbjct: 618 FDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG--VSPDLFTY 675
Query: 90 -TICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRK 148
++ +GYG + + A V +M D + +Q ++L++I L+E + K+
Sbjct: 676 SSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQK--------- 726
Query: 149 MGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVS 208
G P + +++ N D+ +++ +M P++ +Y LI G+C +G++
Sbjct: 727 -GSEPELCAMS--------NMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLR 777
Query: 209 EAKELFNEMEE-KGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTL 267
A+++F+ M+ +G SPS + + +L+ C+ EA +++++M G P + + L
Sbjct: 778 VAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVL 837
Query: 268 MDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGL 327
+ GL K G + + + ++ + + + +I+G+ K+G E+ + M G
Sbjct: 838 ICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGC 897
Query: 328 KPNAGLYGKIISG 340
K ++ Y +I G
Sbjct: 898 KFSSQTYSLLIEG 910
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 112/331 (33%), Positives = 173/331 (52%), Gaps = 8/331 (2%)
Query: 104 AIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIK 163
I + KME ++ ++ VI+ V A++ +M K+G P V++ L+
Sbjct: 104 VISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVN 163
Query: 164 ALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFS 223
C+ + + A+ + +M G +PD Y +I+ LC+ V++A + F E+E KG
Sbjct: 164 GFCR-RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIR 222
Query: 224 PSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMEL 283
P+VVTYT+L++G+C S +A RLL +M K I PNV TYS L+D K G L+A EL
Sbjct: 223 PNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKEL 282
Query: 284 LEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCA 343
E MV P++VTY +LINGLC + EA ++ D M +G + Y +I+GFC
Sbjct: 283 FEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCK 342
Query: 344 ASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRG 403
A +D EM G+ + T+ NT++QG D +A + + M G
Sbjct: 343 AKRVEDGMKLFREMSQRGLVSNTVTY-------NTLIQGFFQAGDVDKAQEFFSQMDFFG 395
Query: 404 ISIEIDTFDCLIKCFCKRGDLNKAARILEEM 434
IS +I T++ L+ C G+L KA I E+M
Sbjct: 396 ISPDIWTYNILLGGLCDNGELEKALVIFEDM 426
Score = 192 bits (487), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 187/350 (53%), Gaps = 8/350 (2%)
Query: 104 AIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIK 163
A+ + KM + + + ++++ N V A++ +M ++G P +V+ N +I
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198
Query: 164 ALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFS 223
+LCK K ++ A F E+ +G +P+ TY L+NGLC S+A L ++M +K +
Sbjct: 199 SLCKTKR-VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKIT 257
Query: 224 PSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMEL 283
P+V+TY++L+ ++ + EA L EEM + I+P++ TYS+L++GLC +A ++
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQM 317
Query: 284 LEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCA 343
++MV+K ++V+Y TLING CK + + +++ M +GL N Y +I GF
Sbjct: 318 FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377
Query: 344 ASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRG 403
A A F +M GISP W+ +N ++ GLC N + +A ++ M+ R
Sbjct: 378 AGDVDKAQEFFSQMDFFGISPD--IWT-----YNILLGGLCDNGELEKALVIFEDMQKRE 430
Query: 404 ISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
+ ++I T+ +I+ CK G + +A + + G PD + +M GL
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 163/329 (49%), Gaps = 7/329 (2%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENC---VVTEDILLTICRGYGRVHRP 101
G++ D + +I L + A + ++++ VVT L+ G R
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN---GLCNSSRW 241
Query: 102 LDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNIL 161
DA R+ M ++ +Y ++D V+ V A + EM +M I P +V+ + L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 162 IKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKG 221
I LC + + ID A Q+F M ++GC D +Y TLING C+ V + +LF EM ++G
Sbjct: 302 INGLCLH-DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 222 FSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAM 281
+ VTY +LI G Q+ ++ +A +M GI P+++TY+ L+ GLC G +A+
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420
Query: 282 ELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGF 341
+ E M + ++VTY T+I G+CK GK EA + + L+GLKP+ Y ++SG
Sbjct: 421 VIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
Query: 342 CAASSYQDAANFIDEMVLGGISPSRATWS 370
C + +M G+ + T S
Sbjct: 481 CTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 167/345 (48%), Gaps = 29/345 (8%)
Query: 139 AIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLI 198
AI + +M K PS+V N L+ A+ K K+ D + + +M G + D YT+ +I
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKK-YDVVISLGKKMEVLGIRNDLYTFNIVI 127
Query: 199 NGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIE 258
N C VS A + +M + G+ P VT SL++G C+ + + +A+ L+++M + G +
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187
Query: 259 PNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEI 318
P++ Y+ ++D LCK A + + + K RPN+VTY L+NGLC ++S+A +
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247
Query: 319 LDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWS-------L 371
L M + + PN Y ++ F +A +EMV I P T+S L
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCL 307
Query: 372 HVRM---------------------HNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDT 410
H R+ +NT++ G C +L+ M RG+ T
Sbjct: 308 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT 367
Query: 411 FDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWD 455
++ LI+ F + GD++KA +M G PD +++++GGL D
Sbjct: 368 YNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCD 412
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 140/288 (48%), Gaps = 7/288 (2%)
Query: 172 IDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTS 231
++ A+ +F +M P + L++ + ++ L +ME G + T+
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 232 LIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKH 291
+I+ C + A+ +L +M K G EP+ T +L++G C+ A+ L++ MV
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 292 NRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAA 351
+P++V Y +I+ LCK + ++A + + +G++PN Y +++G C +S + DAA
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 352 NFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTF 411
+ +M+ I+P+ T+S ++ N A +L+ M I +I T+
Sbjct: 246 RLLSDMIKKKITPNVITYS-------ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298
Query: 412 DCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
LI C +++A ++ + M+S GC+ D ++ ++ G K+V
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRV 346
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 134/489 (27%), Positives = 233/489 (47%), Gaps = 48/489 (9%)
Query: 7 FKWPKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQF 66
F+ SSL+ L K ++ L + + ++GF + +++ L
Sbjct: 156 FRLNYPCYSSLLMSLAK----LDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYT 211
Query: 67 RSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKM-EDFQLKFTQKSYLT 125
+AE + ++ + V+ I ++ G+ R DA++VF M ++ SY
Sbjct: 212 EAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSI 271
Query: 126 VIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR 185
+I L E ++ A +M + G PS + +LIKALC ++ ID A +F EM R
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALC-DRGLIDKAFNLFDEMIPR 330
Query: 186 GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEA 245
GC+P+ +TY LI+GLCR G + EA + +M + PSV+TY +LI+G C+ + A
Sbjct: 331 GCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPA 390
Query: 246 IRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING 305
LL M+K +PNV T++ LM+GLC+ G +A+ LL+ M+ P++V+Y LI+G
Sbjct: 391 FELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDG 450
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPS 365
LC+EG + A ++L M ++P+ + II+ FC A+ F+ M+ GIS
Sbjct: 451 LCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLD 510
Query: 366 RATWSLHVRMHNTVVQGLCSN------------------VDSPRAFQLYLSMRTRGISIE 407
T + T++ G+C + +P + + L M ++G ++
Sbjct: 511 EVTGT-------TLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVK 563
Query: 408 -----------------IDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVM 450
+ T+ L+ + GD+ + RILE M GC+P+ + +++
Sbjct: 564 EELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIII 623
Query: 451 GGLWDRKKV 459
GL +V
Sbjct: 624 NGLCQFGRV 632
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 177/359 (49%), Gaps = 11/359 (3%)
Query: 104 AIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMG-IPPSVVSLNILI 162
A + +ME Y T+++ L + + + A F ++ K+G + S + ++L+
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLL 238
Query: 163 KALCKNKETIDSALQIFHEMPNR-GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKG 221
C+ D AL++F M C P+S +Y LI+GLC +G + EA L ++M EKG
Sbjct: 239 -GFCRGLNLRD-ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKG 296
Query: 222 FSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAM 281
PS TYT LI +C + +A L +EM G +PNV TY+ L+DGLC+ G +A
Sbjct: 297 CQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEAN 356
Query: 282 ELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGF 341
+ MV P+++TY LING CK+G+ A E+L M + KPN + +++ G
Sbjct: 357 GVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGL 416
Query: 342 CAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRT 401
C A + + M+ G+SP ++ N ++ GLC A++L SM
Sbjct: 417 CRVGKPYKAVHLLKRMLDNGLSPDIVSY-------NVLIDGLCREGHMNTAYKLLSSMNC 469
Query: 402 RGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKVR 460
I + TF +I FCK+G + A+ L M+ G D+ ++ G+ K R
Sbjct: 470 FDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTR 528
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 189/404 (46%), Gaps = 20/404 (4%)
Query: 21 LIKAEKD---INKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMK 77
LIKA D I+KA +FD G + + T+ V+I L + A G+ +M
Sbjct: 307 LIKALCDRGLIDKAFNLFDEMIPR---GCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMV 363
Query: 78 QEN---CVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEEN 134
++ V+T + L+ GY + R + A + ME K +++ +++ L
Sbjct: 364 KDRIFPSVITYNALIN---GYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVG 420
Query: 135 HVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTY 194
+A+ + M G+ P +VS N+LI LC+ +++A ++ M +PD T+
Sbjct: 421 KPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGH-MNTAYKLLSSMNCFDIEPDCLTF 479
Query: 195 GTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKK 254
+IN C+ G A M KG S VT T+LI G+C+ +A+ +LE + K
Sbjct: 480 TAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVK 539
Query: 255 NGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSE 314
I + + ++D L KG + + +L + P++VTY TL++GL + G +
Sbjct: 540 MRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITG 599
Query: 315 AVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVR 374
+ IL+ M+L G PN Y II+G C ++A + M G+SP+ T+++
Sbjct: 600 SFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTV--- 656
Query: 375 MHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCF 418
+V+G +N RA + +M RG + + L++ F
Sbjct: 657 ----MVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGF 696
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 190/457 (41%), Gaps = 66/457 (14%)
Query: 52 TFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKM 111
T+ +I+ + A LL M++ C + G RV +P A+ + +M
Sbjct: 373 TYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRM 432
Query: 112 EDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKET 171
D L SY +ID L E H+ A M I P ++ +I A CK +
Sbjct: 433 LDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKA 492
Query: 172 IDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGS------------------------- 206
D A M +G D T TLI+G+C++G
Sbjct: 493 -DVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNV 551
Query: 207 ----------VSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNG 256
V E + ++ + G PSVVTYT+L+ G+ +S ++ + R+LE MK +G
Sbjct: 552 ILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSG 611
Query: 257 IEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAV 316
PNV+ Y+ +++GLC+ G +A +LL M PN VTY ++ G GK A+
Sbjct: 612 CLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRAL 671
Query: 317 EILDRMRLQGLKPNAGLYGKIISGFCAA---------SSYQDAA------NFIDEMV--- 358
E + M +G + N +Y ++ GF + S+ D A I+E++
Sbjct: 672 ETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVV 731
Query: 359 --LGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIK 416
LGG + +V LC + + L ++ RG+ +E D +++
Sbjct: 732 EQLGGCISGLCIF---------LVTRLCKEGRTDESNDLVQNVLERGVFLE-KAMDIIME 781
Query: 417 CFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
+C + K ++ ++ G VP + +V+ GL
Sbjct: 782 SYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGL 818
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 184/407 (45%), Gaps = 30/407 (7%)
Query: 49 DHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVF 108
D TF +I+ + A L M ++ + E T+ G +V + DA+ +
Sbjct: 475 DCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFIL 534
Query: 109 HKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKN 168
+ ++ T S ++D+L + VK +A ++ K+G+ PSVV+ L+ L ++
Sbjct: 535 ETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRS 594
Query: 169 KETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVT 228
+ I + +I M GC P+ Y Y +INGLC+ G V EA++L + M++ G SP+ VT
Sbjct: 595 GD-ITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVT 653
Query: 229 YTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDG--LCKGGHSLQAMELLEM 286
YT ++ G + L A+ + M + G E N YS+L+ G L + G +
Sbjct: 654 YTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSD 713
Query: 287 MVTKHNRPNMVT--------YGTLINGLC--------KEGKFSEAVEILDRMRLQGLKPN 330
+ + P + G I+GLC KEG+ E+ +++ + +G+
Sbjct: 714 IALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLE 773
Query: 331 AGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSP 390
+ I+ +C+ + I ++ G PS ++ L V+QGL D+
Sbjct: 774 KAM-DIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCL-------VIQGLKKEGDAE 825
Query: 391 RAFQLYLSMRTRGISIEIDTFDCLIKCFC---KRGDLNKAARILEEM 434
RA +L + + T +E ++C + GD ++ +++++
Sbjct: 826 RARELVMELLTSNGVVEKSGVLTYVECLMEGDETGDCSEVIDLVDQL 872
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 195 bits (495), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 170/321 (52%), Gaps = 12/321 (3%)
Query: 139 AIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLI 198
A+A + +M ++G+ P V++ N LI LC +++A + ++M +G D TYGT++
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAA-ALVNKMVGKGLHIDVVTYGTIV 268
Query: 199 NGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIE 258
NG+C+MG A L ++MEE P VV Y+++I +C+ + +A L EM + GI
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 259 PNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEI 318
PNVFTY+ ++DG C G A LL M+ + P+++T+ LI+ KEGK EA ++
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 319 LDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNT 378
D M + + P+ Y +I GFC + + DA + D M SP T+ NT
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTF-------NT 437
Query: 379 VVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDG 438
++ C QL + RG+ T++ LI FC+ +LN A + +EMIS G
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497
Query: 439 CVPDKGIWDVVMGGLWDRKKV 459
PD ++++ G + +K+
Sbjct: 498 VCPDTITCNILLYGFCENEKL 518
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/451 (24%), Positives = 200/451 (44%), Gaps = 48/451 (10%)
Query: 45 GFRHDHTTFGVMISRLVAANQ---------------FRSAEGLLERMKQENCVVTEDILL 89
GF+ D TF ++ L ++ F A L ++M +
Sbjct: 171 GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFN 230
Query: 90 TICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKM 149
T+ G R L+A + +KM L +Y T+++ + + K A+ +M +
Sbjct: 231 TLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET 290
Query: 150 GIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSE 209
I P VV + +I LCK+ D A +F EM +G P+ +TY +I+G C G S+
Sbjct: 291 HIKPDVVIYSAIIDRLCKDGHHSD-AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 210 AKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMD 269
A+ L +M E+ +P V+T+ +LI + L EA +L +EM I P+ TY++++
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409
Query: 270 GLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKP 329
G CK A + ++M + P++VT+ T+I+ C+ + E +++L + +GL
Sbjct: 410 GFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA 465
Query: 330 NAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWS------------------- 370
N Y +I GFC + A + EM+ G+ P T +
Sbjct: 466 NTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF 525
Query: 371 ---------LHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKR 421
L +N ++ G+C A+ L+ S+ G+ ++ T++ +I FC +
Sbjct: 526 EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGK 585
Query: 422 GDLNKAARILEEMISDGCVPDKGIWDVVMGG 452
++ A + +M +G PD ++ ++ G
Sbjct: 586 SAISDANVLFHKMKDNGHEPDNSTYNTLIRG 616
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 162/330 (49%), Gaps = 23/330 (6%)
Query: 139 AIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLI 198
AI F+ M + + V N +I + D A+ ++ +M R + Y++ LI
Sbjct: 90 AIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRP-DVAISLYRKMEIRRIPLNIYSFNILI 148
Query: 199 NGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLG--------------- 243
C +S + F ++ + GF P VVT+ +L+HG+C D +
Sbjct: 149 KCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL 208
Query: 244 EAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLI 303
EA+ L ++M + G+ P V T++TL++GLC G L+A L+ MV K ++VTYGT++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 304 NGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGIS 363
NG+CK G A+ +L +M +KP+ +Y II C + DA EM+ GI+
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 364 PSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGD 423
P+ T+ N ++ G CS A +L M R I+ ++ TF+ LI K G
Sbjct: 329 PNVFTY-------NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 424 LNKAARILEEMISDGCVPDKGIWDVVMGGL 453
L +A ++ +EM+ PD ++ ++ G
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 167/361 (46%), Gaps = 16/361 (4%)
Query: 47 RHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTIC--RGYGRVHRPLDA 104
+ D + +I RL A+ L M ++ + ++ C G+ R DA
Sbjct: 293 KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG--IAPNVFTYNCMIDGFCSFGRWSDA 350
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
R+ M + ++ ++ +I V+E + A EM I P V+ N +I
Sbjct: 351 QRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYG 410
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
CK+ D A +F M + PD T+ T+I+ CR V E +L E+ +G
Sbjct: 411 FCKHNR-FDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA 465
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
+ TY +LIHG C+ DNL A L +EM +G+ P+ T + L+ G C+ +A+EL
Sbjct: 466 NTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF 525
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAA 344
E++ + V Y +I+G+CK K EA ++ + + G++P+ Y +ISGFC
Sbjct: 526 EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGK 585
Query: 345 SSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGI 404
S+ DA +M G P +T+ NT+++G + ++ +L MR+ G
Sbjct: 586 SAISDANVLFHKMKDNGHEPDNSTY-------NTLIRGCLKAGEIDKSIELISEMRSNGF 638
Query: 405 S 405
S
Sbjct: 639 S 639
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 133/284 (46%), Gaps = 7/284 (2%)
Query: 49 DHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILL-TICRGYGRVHRPLDAIRV 107
D TF +IS V + AE L + M C+ + + ++ G+ + +R DA +
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHR-CIFPDTVTYNSMIYGFCKHNRFDDAKHM 423
Query: 108 FHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCK 167
F M + ++ T+ID+ V + RE+ + G+ + + N LI C+
Sbjct: 424 FDLMASPDVV----TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE 479
Query: 168 NKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVV 227
+ +++A +F EM + G PD+ T L+ G C + EA ELF ++ V
Sbjct: 480 -VDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTV 538
Query: 228 TYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMM 287
Y +IHGMC+ + EA L + +G+EP+V TY+ ++ G C A L M
Sbjct: 539 AYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKM 598
Query: 288 VTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNA 331
+ P+ TY TLI G K G+ +++E++ MR G +A
Sbjct: 599 KDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDA 642
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 133/288 (46%), Gaps = 22/288 (7%)
Query: 170 ETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTY 229
+++D A+ F M + +I RM A L+ +ME + ++ ++
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 230 TSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGH------------- 276
LI C L ++ ++ K G +P+V T++TL+ GLC
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 277 --SLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLY 334
L+A+ L + MV P ++T+ TLINGLC EG+ EA ++++M +GL + Y
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 335 GKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQ 394
G I++G C + A N + +M I P V +++ ++ LC + A
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPD-------VVIYSAIIDRLCKDGHHSDAQY 317
Query: 395 LYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPD 442
L+ M +GI+ + T++C+I FC G + A R+L +MI PD
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 365
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 127/301 (42%), Gaps = 55/301 (18%)
Query: 25 EKDINKAVLMFD---SATAEYSNGFRH--------------DHTTFGVMISRLVAANQFR 67
E++IN VL F+ SA+ + F D T+ MI N+F
Sbjct: 359 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFD 418
Query: 68 SAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVI 127
A+ + + M + V I+ CR R + +++ ++ L +Y T+I
Sbjct: 419 DAKHMFDLMASPDVVTFNTIIDVYCRA----KRVDEGMQLLREISRRGLVANTTTYNTLI 474
Query: 128 DILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKE----------------- 170
E +++ A ++EM G+ P ++ NIL+ C+N++
Sbjct: 475 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKID 534
Query: 171 -----------------TIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKEL 213
+D A +F +P G +PD TY +I+G C ++S+A L
Sbjct: 535 LDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVL 594
Query: 214 FNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCK 273
F++M++ G P TY +LI G ++ + ++I L+ EM+ NG + FT + D +
Sbjct: 595 FHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITD 654
Query: 274 G 274
G
Sbjct: 655 G 655
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 194 bits (494), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 127/465 (27%), Positives = 216/465 (46%), Gaps = 68/465 (14%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQ---ENCVVTEDILLTICRGYGRVHRP 101
G H+ T+ ++I+ +Q A LL +M + E +VT L ++ GY R
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVT---LSSLLNGYCHGKRI 171
Query: 102 LDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNIL 161
DA+ + +M + + ++ T+I L N A+A M + G P++V+ ++
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 162 IKALCKNKE-------------------------TIDS---------ALQIFHEMPNRGC 187
+ LCK + IDS AL +F EM N+G
Sbjct: 232 VNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 291
Query: 188 QPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIR 247
+P+ TY +LI+ LC S+A L ++M E+ +P+VVT+ +LI + L EA +
Sbjct: 292 RPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEK 351
Query: 248 LLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLC 307
L +EM K I+P++FTYS+L++G C +A + E+M++K PN+VTY TLING C
Sbjct: 352 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFC 411
Query: 308 KEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRA 367
K + E VE+ M +GL N Y +I GF A +A +MV G+ P+
Sbjct: 412 KAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIM 471
Query: 368 TWSL----------------------------HVRMHNTVVQGLCSNVDSPRAFQLYLSM 399
T++ + +N +++G+C + L+ S+
Sbjct: 472 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL 531
Query: 400 RTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKG 444
+G+ ++ ++ +I FC++G +A + +M DG +PD G
Sbjct: 532 SLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSG 576
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 174/362 (48%), Gaps = 10/362 (2%)
Query: 10 PKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSA 69
P +T +V + DI+ A + + A + + +I L A
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA---KIEANVVIYSTVIDSLCKYRHEDDA 279
Query: 70 EGLLERMKQENC---VVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTV 126
L M+ + V+T L++ Y R DA R+ M + ++ ++ +
Sbjct: 280 LNLFTEMENKGVRPNVITYSSLISCLCNYERWS---DASRLLSDMIERKINPNVVTFNAL 336
Query: 127 IDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRG 186
ID V+E + A Y EM K I P + + + LI C + + +D A +F M ++
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH-DRLDEAKHMFELMISKD 395
Query: 187 CQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAI 246
C P+ TY TLING C+ + E ELF EM ++G + VTYT+LIHG Q+ + A
Sbjct: 396 CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 455
Query: 247 RLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGL 306
+ ++M +G+ PN+ TY+TL+DGLCK G +AM + E + P + TY +I G+
Sbjct: 456 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 515
Query: 307 CKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSR 366
CK GK + ++ + L+G+KP+ +Y +ISGFC ++A +M G P
Sbjct: 516 CKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575
Query: 367 AT 368
T
Sbjct: 576 GT 577
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 162/315 (51%), Gaps = 8/315 (2%)
Query: 139 AIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLI 198
AI + M K PS+ N L+ A+ K K+ D + + +M G + YTY LI
Sbjct: 69 AIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKK-FDLVISLGEKMQRLGISHNLYTYNILI 127
Query: 199 NGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIE 258
N CR +S A L +M + G+ PS+VT +SL++G C + +A+ L+++M + G
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187
Query: 259 PNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEI 318
P+ T++TL+ GL + +A+ L++ MV + +PN+VTYG ++NGLCK G A +
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 247
Query: 319 LDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNT 378
L++M ++ N +Y +I C DA N EM G+ P+ T+S +
Sbjct: 248 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS-------S 300
Query: 379 VVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDG 438
++ LC+ A +L M R I+ + TF+ LI F K G L +A ++ +EMI
Sbjct: 301 LISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS 360
Query: 439 CVPDKGIWDVVMGGL 453
PD + ++ G
Sbjct: 361 IDPDIFTYSSLINGF 375
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 136/271 (50%), Gaps = 7/271 (2%)
Query: 172 IDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTS 231
+D A+ +F M P + + L++ + +M L +M+ G S ++ TY
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 232 LIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKH 291
LI+ C+ + A+ LL +M K G EP++ T S+L++G C G A+ L++ MV
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 292 NRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAA 351
RP+ +T+ TLI+GL K SEAV ++DRM +G +PN YG +++G C A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 352 NFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTF 411
N +++M A +V +++TV+ LC A L+ M +G+ + T+
Sbjct: 246 NLLNKM-------EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 298
Query: 412 DCLIKCFCKRGDLNKAARILEEMISDGCVPD 442
LI C C + A+R+L +MI P+
Sbjct: 299 SSLISCLCNYERWSDASRLLSDMIERKINPN 329
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 177/336 (52%), Gaps = 13/336 (3%)
Query: 124 LTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMP 183
L + +VE ++ A+A + +M ++G+ P V++ N LI LC +++A + ++M
Sbjct: 196 LALFGYMVETGFLE-AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAA-ALVNKMV 253
Query: 184 NRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLG 243
+G D TYGT++NG+C+MG A L ++MEE P VV Y+++I +C+ +
Sbjct: 254 GKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHS 313
Query: 244 EAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLI 303
+A L EM + GI PNVFTY+ ++DG C G A LL M+ + P+++T+ LI
Sbjct: 314 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
Query: 304 NGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGIS 363
+ KEGK EA ++ D M + + P+ Y +I GFC + + DA + D M S
Sbjct: 374 SASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----S 429
Query: 364 PSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGD 423
P T+ NT++ C QL + RG+ T++ LI FC+ +
Sbjct: 430 PDVVTF-------NTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 482
Query: 424 LNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
LN A + +EMIS G PD ++++ G + +K+
Sbjct: 483 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 518
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/475 (24%), Positives = 207/475 (43%), Gaps = 48/475 (10%)
Query: 21 LIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQ--------------- 65
LIK D +K + GF+ D TF ++ L ++
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 66 FRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLT 125
F A L ++M + T+ G R L+A + +KM L +Y T
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 126 VIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR 185
+++ + + K A+ +M + I P VV + +I LCK+ D A +F EM +
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSD-AQYLFSEMLEK 325
Query: 186 GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEA 245
G P+ +TY +I+G C G S+A+ L +M E+ +P V+T+ +LI + L EA
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA 385
Query: 246 IRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING 305
+L +EM I P+ TY++++ G CK A + ++M + P++VT+ T+I+
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDV 441
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPS 365
C+ + E +++L + +GL N Y +I GFC + A + EM+ G+ P
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Query: 366 RATWS----------------------------LHVRMHNTVVQGLCSNVDSPRAFQLYL 397
T + L +N ++ G+C A+ L+
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 561
Query: 398 SMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGG 452
S+ G+ ++ T++ +I FC + ++ A + +M +G PD ++ ++ G
Sbjct: 562 SLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 616
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 162/330 (49%), Gaps = 23/330 (6%)
Query: 139 AIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLI 198
AI F+ M + + V N +I + D A+ ++ +M R + Y++ LI
Sbjct: 90 AIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRP-DVAISLYRKMEIRRIPLNIYSFNILI 148
Query: 199 NGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLG--------------- 243
C +S + F ++ + GF P VVT+ +L+HG+C D +
Sbjct: 149 KCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL 208
Query: 244 EAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLI 303
EA+ L ++M + G+ P V T++TL++GLC G L+A L+ MV K ++VTYGT++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 304 NGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGIS 363
NG+CK G A+ +L +M +KP+ +Y II C + DA EM+ GI+
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 364 PSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGD 423
P+ T+ N ++ G CS A +L M R I+ ++ TF+ LI K G
Sbjct: 329 PNVFTY-------NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 424 LNKAARILEEMISDGCVPDKGIWDVVMGGL 453
L +A ++ +EM+ PD ++ ++ G
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 173/379 (45%), Gaps = 16/379 (4%)
Query: 47 RHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTIC--RGYGRVHRPLDA 104
+ D + +I RL A+ L M ++ + ++ C G+ R DA
Sbjct: 293 KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG--IAPNVFTYNCMIDGFCSFGRWSDA 350
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
R+ M + ++ ++ +I V+E + A EM I P V+ N +I
Sbjct: 351 QRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYG 410
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
CK+ D A +F M + PD T+ T+I+ CR V E +L E+ +G
Sbjct: 411 FCKHNR-FDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA 465
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
+ TY +LIHG C+ DNL A L +EM +G+ P+ T + L+ G C+ +A+EL
Sbjct: 466 NTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF 525
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAA 344
E++ + V Y +I+G+CK K EA ++ + + G++P+ Y +ISGFC
Sbjct: 526 EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGK 585
Query: 345 SSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGI 404
S+ DA +M G P +T+ NT+++G + ++ +L MR+ G
Sbjct: 586 SAISDANVLFHKMKDNGHEPDNSTY-------NTLIRGCLKAGEIDKSIELISEMRSNGF 638
Query: 405 SIEIDTFDCLIKCFCKRGD 423
S + T + C+ D
Sbjct: 639 SGDAFTIKMAEEIICRVSD 657
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 133/288 (46%), Gaps = 22/288 (7%)
Query: 170 ETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTY 229
+++D A+ F M + +I RM A L+ +ME + ++ ++
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 230 TSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGH------------- 276
LI C L ++ ++ K G +P+V T++TL+ GLC
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 277 --SLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLY 334
L+A+ L + MV P ++T+ TLINGLC EG+ EA ++++M +GL + Y
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 335 GKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQ 394
G I++G C + A N + +M I P V +++ ++ LC + A
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPD-------VVIYSAIIDRLCKDGHHSDAQY 317
Query: 395 LYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPD 442
L+ M +GI+ + T++C+I FC G + A R+L +MI PD
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 365
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 208/409 (50%), Gaps = 9/409 (2%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
G R T+ +MI + +A GL E MK V ++ G+G+V R D
Sbjct: 257 GARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDT 316
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
+ F +M+D + +Y +I+ + + + FYREM+ G+ P+VVS + L+ A
Sbjct: 317 VCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDA 376
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
CK + + A++ + +M G P+ YTY +LI+ C++G++S+A L NEM + G
Sbjct: 377 FCK-EGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEW 435
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
+VVTYT+LI G+C ++ + EA L +M G+ PN+ +Y+ L+ G K + +A+ELL
Sbjct: 436 NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELL 495
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAA 344
+ + +P+++ YGT I GLC K A +++ M+ G+K N+ +Y ++ + +
Sbjct: 496 NELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKS 555
Query: 345 SSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTR-G 403
+ + + +DEM I + T+ + ++ GLC N +A + + G
Sbjct: 556 GNPTEGLHLLDEMKELDIEVTVVTFCV-------LIDGLCKNKLVSKAVDYFNRISNDFG 608
Query: 404 ISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGG 452
+ F +I CK + A + E+M+ G VPD+ + +M G
Sbjct: 609 LQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG 657
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/425 (28%), Positives = 205/425 (48%), Gaps = 29/425 (6%)
Query: 44 NGFRHDHTTFGVMISRLVAANQFRSAEGLLERM--KQENCVVTEDILLT--IC-RGYGRV 98
NGF+H ++ ++ L A + A +L+ M + +C V + + T +C G+G
Sbjct: 136 NGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVF 195
Query: 99 HRPL----------DAIRVFHKMEDFQLKFTQKS---YLTVIDILVEENHVKRAIAFYRE 145
+AI+ F KM+ F++ +S L L + + VKR F+++
Sbjct: 196 DALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR---FFKD 252
Query: 146 MRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMG 205
M G P+V + NI+I +CK + +++A +F EM RG PD+ TY ++I+G ++G
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGD-VEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVG 311
Query: 206 SVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYS 265
+ + F EM++ P V+TY +LI+ C+ L + EMK NG++PNV +YS
Sbjct: 312 RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYS 371
Query: 266 TLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQ 325
TL+D CK G QA++ M PN TY +LI+ CK G S+A + + M
Sbjct: 372 TLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQV 431
Query: 326 GLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCS 385
G++ N Y +I G C A ++A +M G+ P+ A+ +N ++ G
Sbjct: 432 GVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLAS-------YNALIHGFVK 484
Query: 386 NVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGI 445
+ RA +L ++ RGI ++ + I C + A ++ EM G + I
Sbjct: 485 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLI 544
Query: 446 WDVVM 450
+ +M
Sbjct: 545 YTTLM 549
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 177/383 (46%), Gaps = 8/383 (2%)
Query: 52 TFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKM 111
F + S L+ A +MK+ + + ++ + D R F M
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 253
Query: 112 EDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKET 171
+ T +Y +ID + +E V+ A + EM+ G+ P V+ N +I K
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR- 312
Query: 172 IDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTS 231
+D + F EM + C+PD TY LIN C+ G + E + EM+ G P+VV+Y++
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372
Query: 232 LIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKH 291
L+ C+ + +AI+ +M++ G+ PN +TY++L+D CK G+ A L M+
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 432
Query: 292 NRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAA 351
N+VTY LI+GLC + EA E+ +M G+ PN Y +I GF A + A
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 492
Query: 352 NFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTF 411
++E+ GI P + ++ T + GLCS A + M+ GI +
Sbjct: 493 ELLNELKGRGIKPD-------LLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIY 545
Query: 412 DCLIKCFCKRGDLNKAARILEEM 434
L+ + K G+ + +L+EM
Sbjct: 546 TTLMDAYFKSGNPTEGLHLLDEM 568
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 7/274 (2%)
Query: 187 CQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAI 246
C P + L + L +G + EA + F++M+ P + L+H + +
Sbjct: 188 CVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVK 247
Query: 247 RLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGL 306
R ++M G P VFTY+ ++D +CK G A L E M + P+ VTY ++I+G
Sbjct: 248 RFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF 307
Query: 307 CKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSR 366
K G+ + V + M+ +P+ Y +I+ FC F EM G+ P+
Sbjct: 308 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNV 367
Query: 367 ATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNK 426
++S T+V C +A + Y+ MR G+ T+ LI CK G+L+
Sbjct: 368 VSYS-------TLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSD 420
Query: 427 AARILEEMISDGCVPDKGIWDVVMGGLWDRKKVR 460
A R+ EM+ G + + ++ GL D ++++
Sbjct: 421 AFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMK 454
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 149/314 (47%), Gaps = 10/314 (3%)
Query: 8 KWPKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFR 67
+W ++L++ L AE+ L TA G + ++ +I V A
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTA----GVIPNLASYNALIHGFVKAKNMD 489
Query: 68 SAEGLLERMKQENCVVTEDILL--TICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLT 125
A LL +K + D+LL T G + + A V ++M++ +K Y T
Sbjct: 490 RALELLNELKGRG--IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTT 547
Query: 126 VIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR 185
++D + + + EM+++ I +VV+ +LI LCKNK + A+ F+ + N
Sbjct: 548 LMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNK-LVSKAVDYFNRISND 606
Query: 186 -GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGE 244
G Q ++ + +I+GLC+ V A LF +M +KG P YTSL+ G + N+ E
Sbjct: 607 FGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLE 666
Query: 245 AIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLIN 304
A+ L ++M + G++ ++ Y++L+ GL +A LE M+ + P+ V +++
Sbjct: 667 ALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLK 726
Query: 305 GLCKEGKFSEAVEI 318
+ G EAVE+
Sbjct: 727 KHYELGCIDEAVEL 740
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 104/277 (37%), Gaps = 57/277 (20%)
Query: 217 MEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFT------------- 263
M GF SV +Y + H + + +A +L+EM + + +VF
Sbjct: 133 MTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGF 192
Query: 264 ------YSTLMD-GL----------------------CKG--------GHSLQAMELLEM 286
+S L+D G+ C G G + +
Sbjct: 193 GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 252
Query: 287 MVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASS 346
M+ RP + TY +I+ +CKEG A + + M+ +GL P+ Y +I GF
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 312
Query: 347 YQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISI 406
D F +EM P T +N ++ C P + Y M+ G+
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVIT-------YNALINCFCKFGKLPIGLEFYREMKGNGLKP 365
Query: 407 EIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDK 443
+ ++ L+ FCK G + +A + +M G VP++
Sbjct: 366 NVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNE 402
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 185/390 (47%), Gaps = 41/390 (10%)
Query: 104 AIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIK 163
I + KM+ + +Y +I+ + + A+A +M K+G PS+V+L+ L+
Sbjct: 29 VISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 88
Query: 164 ALCKNKETIDS----------------------------------ALQIFHEMPNRGCQP 189
C K D+ A+ + M RGCQP
Sbjct: 89 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 148
Query: 190 DSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLL 249
+ TYG ++NGLC+ G + A L N+ME VV + ++I +C+ ++ +A+ L
Sbjct: 149 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 208
Query: 250 EEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKE 309
+EM+ GI PNV TYS+L+ LC G A +LL M+ K PN+VT+ LI+ KE
Sbjct: 209 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 268
Query: 310 GKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATW 369
GKF EA ++ D M + + P+ Y +I+GFC A + MV P T+
Sbjct: 269 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTY 328
Query: 370 SLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAAR 429
NT+++G C + +L+ M RG+ + T+ LI+ GD + A +
Sbjct: 329 -------NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 381
Query: 430 ILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
+ ++M+SDG PD + +++ GL + K+
Sbjct: 382 VFKQMVSDGVPPDIMTYSILLDGLCNNGKL 411
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/467 (28%), Positives = 213/467 (45%), Gaps = 50/467 (10%)
Query: 26 KDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENC---V 82
K I+ AV + D G+R D TF +I L N+ A L++RM Q C +
Sbjct: 94 KRISDAVALVDQMV---EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 150
Query: 83 VTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAF 142
VT +++ G + A + +KME +++ + T+ID L + HV A+
Sbjct: 151 VTYGVVVNGLCKRGDIDL---AFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 207
Query: 143 YREMRKMGIPPSVVSLNILIKALCK---------------------NKETIDSALQIF-- 179
++EM GI P+VV+ + LI LC N T ++ + F
Sbjct: 208 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 267
Query: 180 -----------HEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVT 228
+M R PD +TY +LING C + +AK++F M K P + T
Sbjct: 268 EGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDT 327
Query: 229 YTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMV 288
Y +LI G C+S + + L EM G+ + TY+TL+ GL G A ++ + MV
Sbjct: 328 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 387
Query: 289 TKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQ 348
+ P+++TY L++GLC GK +A+E+ D M+ +K + +Y +I G C A
Sbjct: 388 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 447
Query: 349 DAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEI 408
D + + L G+ P+ T+ NT++ GLCS A+ L M+ G +
Sbjct: 448 DGWDLFCSLSLKGVKPNVVTY-------NTMISGLCSKRLLQEAYALLKKMKEDGPLPDS 500
Query: 409 DTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWD 455
T++ LI+ + GD +A ++ EM S V D +V L D
Sbjct: 501 GTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHD 547
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 117/418 (27%), Positives = 204/418 (48%), Gaps = 14/418 (3%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQ---ENCVVTEDILLTICRGYGRVHRP 101
G H+ T+ ++I+ +Q A LL +M + E +VT L ++ GY R
Sbjct: 40 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVT---LSSLLNGYCHGKRI 96
Query: 102 LDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNIL 161
DA+ + +M + + ++ T+I L N A+A M + G P++V+ ++
Sbjct: 97 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 156
Query: 162 IKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKG 221
+ LCK + ID A + ++M + D + T+I+ LC+ V +A LF EME KG
Sbjct: 157 VNGLCKRGD-IDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215
Query: 222 FSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAM 281
P+VVTY+SLI +C +A +LL +M + I PN+ T++ L+D K G ++A
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275
Query: 282 ELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGF 341
+L + M+ + P++ TY +LING C + +A ++ + M + P+ Y +I GF
Sbjct: 276 KLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 335
Query: 342 CAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRT 401
C + +D EM G+ T++ T++QGL + D A +++ M +
Sbjct: 336 CKSKRVEDGTELFREMSHRGLVGDTVTYT-------TLIQGLFHDGDCDNAQKVFKQMVS 388
Query: 402 RGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
G+ +I T+ L+ C G L KA + + M D I+ ++ G+ KV
Sbjct: 389 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 446
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 177/370 (47%), Gaps = 10/370 (2%)
Query: 10 PKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSA 69
P +T +V + DI+ A + + A D F +I L A
Sbjct: 148 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA---KIEADVVIFNTIIDSLCKYRHVDDA 204
Query: 70 EGLLERMKQENC---VVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTV 126
L + M+ + VVT L++ YGR DA ++ M + ++ ++ +
Sbjct: 205 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS---DASQLLSDMIEKKINPNLVTFNAL 261
Query: 127 IDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRG 186
ID V+E A + +M K I P + + N LI C + + +D A Q+F M ++
Sbjct: 262 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH-DRLDKAKQMFEFMVSKD 320
Query: 187 CQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAI 246
C PD TY TLI G C+ V + ELF EM +G VTYT+LI G+ + A
Sbjct: 321 CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 380
Query: 247 RLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGL 306
++ ++M +G+ P++ TYS L+DGLC G +A+E+ + M + ++ Y T+I G+
Sbjct: 381 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 440
Query: 307 CKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSR 366
CK GK + ++ + L+G+KPN Y +ISG C+ Q+A + +M G P
Sbjct: 441 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDS 500
Query: 367 ATWSLHVRMH 376
T++ +R H
Sbjct: 501 GTYNTLIRAH 510
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 157/301 (52%), Gaps = 8/301 (2%)
Query: 153 PSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKE 212
PS+ N L+ A+ K K+ D + + +M G + YTY LIN CR +S A
Sbjct: 8 PSIFEFNKLLSAIAKMKK-FDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 213 LFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLC 272
L +M + G+ PS+VT +SL++G C + +A+ L+++M + G P+ T++TL+ GL
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 273 KGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAG 332
+ +A+ L++ MV + +PN+VTYG ++NGLCK G A +L++M ++ +
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 333 LYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRA 392
++ II C DA N EM GI P+ T+S +++ LCS A
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS-------SLISCLCSYGRWSDA 239
Query: 393 FQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGG 452
QL M + I+ + TF+ LI F K G +A ++ ++MI PD ++ ++ G
Sbjct: 240 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLING 299
Query: 453 L 453
Sbjct: 300 F 300
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 7/173 (4%)
Query: 287 MVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASS 346
MV P++ + L++ + K KF + + ++M+ G+ N Y +I+ FC S
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 347 YQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISI 406
A + +M+ G PS T S +++ G C A L M G
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLS-------SLLNGYCHGKRISDAVALVDQMVEMGYRP 113
Query: 407 EIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
+ TF LI ++A +++ M+ GC P+ + VV+ GL R +
Sbjct: 114 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 166
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 128/415 (30%), Positives = 208/415 (50%), Gaps = 24/415 (5%)
Query: 53 FGVMISRLVAANQFRSAEGLLERMKQENCV---VTEDILLT-ICRGYGRVHRPLDAIRVF 108
F ++S + +F L E+M++ V T +IL+ CR R L A+ +
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCR---RSQISL-ALALL 143
Query: 109 HKMEDFQLKFTQKSYLTVIDILVEENHVKR---AIAFYREMRKMGIPPSVVSLNILIKAL 165
KM +L + + S +T+ +L H KR A+A +M +MG P ++ LI L
Sbjct: 144 GKM--MKLGY-EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 166 -CKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
NK + A+ + M RGCQP+ TYG ++NGLC+ G A L N+ME
Sbjct: 201 FLHNKAS--EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA 258
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
VV + ++I +C+ ++ +A+ L +EM+ GI PNV TYS+L+ LC G A +LL
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 318
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAA 344
M+ K PN+VT+ LI+ KEGKF EA ++ D M + + P+ Y +++GFC
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378
Query: 345 SSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGI 404
A + MV P T+ NT+++G C + +L+ M RG+
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTY-------NTLIKGFCKSKRVEDGTELFREMSHRGL 431
Query: 405 SIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
+ T+ LI+ GD + A ++ ++M+SDG PD + +++ GL + K+
Sbjct: 432 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 486
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 135/468 (28%), Positives = 217/468 (46%), Gaps = 52/468 (11%)
Query: 26 KDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENC---V 82
K I+ AV + D G+R D TF +I L N+ A L++RM Q C +
Sbjct: 169 KRISDAVALVDQMV---EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 225
Query: 83 VTEDILLT-ICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIA 141
VT +++ +C+ R L A+ + +KME +++ + T+ID L + HV A+
Sbjct: 226 VTYGVVVNGLCK---RGDTDL-ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 281
Query: 142 FYREMRKMGIPPSVVSLNILIKALCKNKETIDS--------------------------- 174
++EM GI P+VV+ + LI LC D+
Sbjct: 282 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 341
Query: 175 -------ALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVV 227
A +++ +M R PD +TY +L+NG C + +AK++F M K P VV
Sbjct: 342 KEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV 401
Query: 228 TYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMM 287
TY +LI G C+S + + L EM G+ + TY+TL+ GL G A ++ + M
Sbjct: 402 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 461
Query: 288 VTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSY 347
V+ P+++TY L++GLC GK +A+E+ D M+ +K + +Y +I G C A
Sbjct: 462 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 521
Query: 348 QDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIE 407
D + + L G+ P+ T+ NT++ GLCS A+ L M+ G
Sbjct: 522 DDGWDLFCSLSLKGVKPNVVTY-------NTMISGLCSKRLLQEAYALLKKMKEDGPLPN 574
Query: 408 IDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWD 455
T++ LI+ + GD +A ++ EM S V D +V L D
Sbjct: 575 SGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHD 622
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 118/468 (25%), Positives = 215/468 (45%), Gaps = 68/468 (14%)
Query: 48 HDHTTFGVMISRLVAANQFRSAEGLLERMKQ---ENCVVTEDILLTICRGYGRVHRPLDA 104
H T+ ++I+ +Q A LL +M + E +VT L ++ GY R DA
Sbjct: 118 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVT---LSSLLNGYCHGKRISDA 174
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
+ + +M + + ++ T+I L N A+A M + G P++V+ +++
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 165 LCKNKET----------------------------------IDSALQIFHEMPNRGCQPD 190
LCK +T +D AL +F EM +G +P+
Sbjct: 235 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 294
Query: 191 SYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLE 250
TY +LI+ LC G S+A +L ++M EK +P++VT+ +LI + EA +L +
Sbjct: 295 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 354
Query: 251 EMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEG 310
+M K I+P++FTY++L++G C +A ++ E MV+K P++VTY TLI G CK
Sbjct: 355 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 414
Query: 311 KFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWS 370
+ + E+ M +GL + Y +I G +A +MV G+ P T+S
Sbjct: 415 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS 474
Query: 371 ----------------------------LHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTR 402
L + ++ T+++G+C + L+ S+ +
Sbjct: 475 ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 534
Query: 403 GISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVM 450
G+ + T++ +I C + L +A +L++M DG +P+ G ++ ++
Sbjct: 535 GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 132/271 (48%), Gaps = 7/271 (2%)
Query: 172 IDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTS 231
+D A+ +F M P + L++ + +M L +M+ + TY
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 232 LIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKH 291
LI+ C+ + A+ LL +M K G EP++ T S+L++G C G A+ L++ MV
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 292 NRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAA 351
RP+ +T+ TLI+GL K SEAV ++DRM +G +PN YG +++G C A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 352 NFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTF 411
N +++M A V + NT++ LC A L+ M T+GI + T+
Sbjct: 246 NLLNKM-------EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 298
Query: 412 DCLIKCFCKRGDLNKAARILEEMISDGCVPD 442
LI C C G + A+++L +MI P+
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPN 329
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 111/338 (32%), Positives = 179/338 (52%), Gaps = 15/338 (4%)
Query: 126 VIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR 185
++ L E V RAI ++R+M +G P++++ LI LCK K +I A ++ EM
Sbjct: 258 ILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCK-KGSIKQAFEMLEEMVRN 316
Query: 186 GCQPDSYTYGTLINGLCRMGSVSEAKELFNEM-EEKGFSPSVVTYTSLIHGMCQSDNLGE 244
G +P+ YT+ LI+GLC+ G +A LF ++ + P+V TYTS+I G C+ D L
Sbjct: 317 GWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNR 376
Query: 245 AIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLIN 304
A L MK+ G+ PNV TY+TL++G CK G +A EL+ +M + PN+ TY I+
Sbjct: 377 AEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAID 436
Query: 305 GLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISP 364
LCK+ + EA E+L++ GL+ + Y +I C + A F M
Sbjct: 437 SLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRM------- 489
Query: 365 SRATWSLHVRMHNTVVQGLCSNV---DSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKR 421
++ + +R++N ++ C +S R FQL +S+ G+ +T+ +I C+CK
Sbjct: 490 NKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSL---GLIPTKETYTSMISCYCKE 546
Query: 422 GDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
GD++ A + M GCVPD + ++ GL + V
Sbjct: 547 GDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMV 584
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 205/416 (49%), Gaps = 24/416 (5%)
Query: 46 FRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAI 105
FRH + V L+A + A +++ + R + + R +A+
Sbjct: 123 FRHFMRLYLVTADSLLANGNLQKAH---------------EVMRCMLRNFSEIGRLNEAV 167
Query: 106 RVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKAL 165
+ M++ L + + V++I VE ++ A + EM G+ P S +++
Sbjct: 168 GMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIG- 226
Query: 166 CKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPS 225
C I A + M RG PD+ T ++ LC G V+ A F +M + GF P+
Sbjct: 227 CFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPN 286
Query: 226 VVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMEL-L 284
++ +TSLI G+C+ ++ +A +LEEM +NG +PNV+T++ L+DGLCK G + +A L L
Sbjct: 287 LINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFL 346
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAA 344
+++ + +PN+ TY ++I G CKE K + A + RM+ QGL PN Y +I+G C A
Sbjct: 347 KLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKA 406
Query: 345 SSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGI 404
S+ A ++ M G P ++ +N + LC +P A++L + G+
Sbjct: 407 GSFGRAYELMNLMGDEGFMP-------NIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGL 459
Query: 405 SIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKVR 460
+ T+ LI+ CK+ D+N+A M G D + ++++ +KK++
Sbjct: 460 EADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMK 515
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 211/436 (48%), Gaps = 18/436 (4%)
Query: 10 PKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSA 69
P IT + V ++ I A +FD + G D +++ +M+ + + A
Sbjct: 180 PSSITMNCVLEIAVELGLIEYAENVFDEMSVR---GVVPDSSSYKLMVIGCFRDGKIQEA 236
Query: 70 EGLLERMKQENCV---VTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTV 126
+ L M Q + T ++LT G V+R AI F KM D K ++ ++
Sbjct: 237 DRWLTGMIQRGFIPDNATCTLILTALCENGLVNR---AIWYFRKMIDLGFKPNLINFTSL 293
Query: 127 IDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRG 186
ID L ++ +K+A EM + G P+V + LI LCK T + A ++F ++
Sbjct: 294 IDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWT-EKAFRLFLKLVRSD 352
Query: 187 C-QPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEA 245
+P+ +TY ++I G C+ ++ A+ LF+ M+E+G P+V TYT+LI+G C++ + G A
Sbjct: 353 TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRA 412
Query: 246 IRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING 305
L+ M G PN++TY+ +D LCK + +A ELL + + VTY LI
Sbjct: 413 YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 472
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPS 365
CK+ ++A+ RM G + + L +I+ FC +++ +V G+ P+
Sbjct: 473 QCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPT 532
Query: 366 RATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLN 425
+ T++ +++ C D A + + +M+ G + T+ LI CK+ ++
Sbjct: 533 KETYT-------SMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVD 585
Query: 426 KAARILEEMISDGCVP 441
+A ++ E MI G P
Sbjct: 586 EACKLYEAMIDRGLSP 601
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 188/440 (42%), Gaps = 25/440 (5%)
Query: 10 PKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSA 69
P T +L+ + +N+A+ F GF+ + F +I L + A
Sbjct: 250 PDNATCTLILTALCENGLVNRAIWYFRKMI---DLGFKPNLINFTSLIDGLCKKGSIKQA 306
Query: 70 EGLLERMKQE----NCVVTEDILLTIC-RGYGRVHRPLDAIRVFHKM-EDFQLKFTQKSY 123
+LE M + N ++ +C RG+ A R+F K+ K +Y
Sbjct: 307 FEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTE-----KAFRLFLKLVRSDTYKPNVHTY 361
Query: 124 LTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMP 183
++I +E+ + RA + M++ G+ P+V + LI CK + A ++ + M
Sbjct: 362 TSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCK-AGSFGRAYELMNLMG 420
Query: 184 NRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLG 243
+ G P+ YTY I+ LC+ EA EL N+ G VTYT LI C+ +++
Sbjct: 421 DEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDIN 480
Query: 244 EAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLI 303
+A+ M K G E ++ + L+ C+ ++ L +++V+ P TY ++I
Sbjct: 481 QALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMI 540
Query: 304 NGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGIS 363
+ CKEG A++ M+ G P++ YG +ISG C S +A + M+ G+S
Sbjct: 541 SCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLS 600
Query: 364 PSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGD 423
P T T+ C DS A L + + + I T L++ C
Sbjct: 601 PPEVT-------RVTLAYEYCKRNDSANAMILLEPLDKK---LWIRTVRTLVRKLCSEKK 650
Query: 424 LNKAARILEEMISDGCVPDK 443
+ AA ++++ D+
Sbjct: 651 VGVAALFFQKLLEKDSSADR 670
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 120/474 (25%), Positives = 224/474 (47%), Gaps = 32/474 (6%)
Query: 9 WPKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRS 68
+PK ++ V +L+K+EK+ A +FDSAT G+ H + ++ RL
Sbjct: 4 FPKSLSPKHVLKLLKSEKNPRAAFALFDSATRH--PGYAHSAVVYHHILRRLSETRMVNH 61
Query: 69 AEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKM-EDFQLKFTQKSYLTVI 127
++E ++ + C ED+ L++ + YG+ P A+ VF +M E F + +SY T++
Sbjct: 62 VSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLL 121
Query: 128 DILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGC 187
+ VE + + + G+ P++ + N+LIK CK KE + A M G
Sbjct: 122 NAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKE-FEKARGFLDWMWKEGF 180
Query: 188 QPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIR 247
+PD ++Y T+IN L + G + +A ELF+EM E+G +P V Y LI G + + A+
Sbjct: 181 KPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAME 240
Query: 248 LLEE-MKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGL 306
L + ++ + + PNV T++ ++ GL K G +++ E M ++ TY +LI+GL
Sbjct: 241 LWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGL 300
Query: 307 CKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAAS------------SYQDAANFI 354
C G +A + + + + + Y ++ GFC ++++ N +
Sbjct: 301 CDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIV 360
Query: 355 DEMVL-------GGISPSRATWSL--------HVRMHNTVVQGLCSNVDSPRAFQLYLSM 399
+L G I + W L + + GLC N +A + +
Sbjct: 361 SYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEV 420
Query: 400 RTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
+ G +++ + +I C CK+ L +A+ +++EM G + + + ++GGL
Sbjct: 421 ESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGL 474
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 134/477 (28%), Positives = 219/477 (45%), Gaps = 53/477 (11%)
Query: 15 SSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLE 74
S+++ L KA K ++ A+ +FD + G D T + ++I + ++A L +
Sbjct: 188 STVINDLAKAGK-LDDALELFDEMS---ERGVAPDVTCYNILIDGFLKEKDHKTAMELWD 243
Query: 75 RMKQENCVV----TEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDIL 130
R+ +++ V T +I+++ GRV D ++++ +M+ + + +Y ++I L
Sbjct: 244 RLLEDSSVYPNVKTHNIMISGLSKCGRVD---DCLKIWERMKQNEREKDLYTYSSLIHGL 300
Query: 131 VEENHVKRAIAFYREM--RKMGI--------------------------------PPSVV 156
+ +V +A + + E+ RK I ++V
Sbjct: 301 CDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIV 360
Query: 157 SLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNE 216
S NILIK L +N + ID A I+ MP +G D TYG I+GLC G V++A + E
Sbjct: 361 SYNILIKGLLENGK-IDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQE 419
Query: 217 MEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGH 276
+E G V Y S+I +C+ L EA L++EM K+G+E N + L+ GL +
Sbjct: 420 VESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSR 479
Query: 277 SLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGK 336
+A L M RP +V+Y LI GLCK GKF EA + M G KP+ Y
Sbjct: 480 LGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSI 539
Query: 337 IISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLY 396
++ G C A + + G+ V MHN ++ GLCS A +
Sbjct: 540 LLCGLCRDRKIDLALELWHQFLQSGLETD-------VMMHNILIHGLCSVGKLDDAMTVM 592
Query: 397 LSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
+M R + + T++ L++ F K GD N+A I M G PD ++ +M GL
Sbjct: 593 ANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGL 649
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 197/410 (48%), Gaps = 12/410 (2%)
Query: 52 TFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKM 111
T+ V+I +F A G L+ M +E T+ + + DA+ +F +M
Sbjct: 151 TYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEM 210
Query: 112 EDFQLKFTQKSYLTVIDILVEENHVKRAIAFY-REMRKMGIPPSVVSLNILIKALCKNKE 170
+ + Y +ID ++E K A+ + R + + P+V + NI+I L K
Sbjct: 211 SERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGR 270
Query: 171 TIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYT 230
+D L+I+ M + D YTY +LI+GLC G+V +A+ +FNE++E+ S VVTY
Sbjct: 271 -VDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYN 329
Query: 231 SLIHGMCQSDNLGEAIRLLEEMK-KNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVT 289
+++ G C+ + E++ L M+ KN + N+ +Y+ L+ GL + G +A + +M
Sbjct: 330 TMLGGFCRCGKIKESLELWRIMEHKNSV--NIVSYNILIKGLLENGKIDEATMIWRLMPA 387
Query: 290 KHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQD 349
K + TYG I+GLC G ++A+ ++ + G + Y II C ++
Sbjct: 388 KGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEE 447
Query: 350 AANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEID 409
A+N + EM G+ L+ + N ++ GL + A M G +
Sbjct: 448 ASNLVKEMSKHGVE-------LNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVV 500
Query: 410 TFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
+++ LI CK G +A+ ++EM+ +G PD + +++ GL +K+
Sbjct: 501 SYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKI 550
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 174/405 (42%), Gaps = 38/405 (9%)
Query: 49 DHTTFGVMISRLVAANQFRSAEGLLERMKQENC---VVTEDILLT-ICRGYGRVHRPLDA 104
D T+ +I L A AE + + + VVT + +L CR G++ L+
Sbjct: 289 DLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRC-GKIKESLEL 347
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
R+ + SY +I L+E + A +R M G + I I
Sbjct: 348 WRIMEHKNSVNIV----SYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHG 403
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
LC N ++ AL + E+ + G D Y Y ++I+ LC+ + EA L EM + G
Sbjct: 404 LCVNG-YVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVEL 462
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
+ +LI G+ + LGEA L EM KNG P V +Y+ L+ GLCK G +A +
Sbjct: 463 NSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFV 522
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAA 344
+ M+ +P++ TY L+ GLC++ K A+E+ + GL+ + ++ +I G C+
Sbjct: 523 KEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSV 582
Query: 345 SSYQDA-------------ANFIDEMVL-------GGISPSRATWSLHVRM--------H 376
DA AN + L G + + W +M +
Sbjct: 583 GKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISY 642
Query: 377 NTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKR 421
NT+++GLC A + + R GI + T++ L++ R
Sbjct: 643 NTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVNR 687
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 150/331 (45%), Gaps = 20/331 (6%)
Query: 134 NHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPN-RGCQPDSY 192
NHV R + R +S+ IK KN D AL +F M GC+P
Sbjct: 60 NHVSRIVELIRSQECKCDEDVALSV---IKTYGKNSMP-DQALDVFKRMREIFGCEPAIR 115
Query: 193 TYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEM 252
+Y TL+N + + LF E G +P++ TY LI C+ +A L+ M
Sbjct: 116 SYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWM 175
Query: 253 KKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKF 312
K G +P+VF+YST+++ L K G A+EL + M + P++ Y LI+G KE
Sbjct: 176 WKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDH 235
Query: 313 SEAVEILDR-MRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSL 371
A+E+ DR + + PN + +ISG D + M T+S
Sbjct: 236 KTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYS- 294
Query: 372 HVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAA--- 428
+++ GLC + +A ++ + R SI++ T++ ++ FC+ G + ++
Sbjct: 295 ------SLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW 348
Query: 429 RILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
RI+E S V +++++ GL + K+
Sbjct: 349 RIMEHKNSVNIVS----YNILIKGLLENGKI 375
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 106/243 (43%), Gaps = 26/243 (10%)
Query: 14 TSSLVEQLIKAEKDINKAV-------LMFDSATAEYS--------NGFRHDHTTFGVMIS 58
S+LV+++ K ++N V L+ DS E S NG R ++ ++I
Sbjct: 448 ASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILIC 507
Query: 59 RLVAANQFRSAEGLLERMKQENC---VVTEDILLT-ICRGYGRVHRPLD-AIRVFHKMED 113
L A +F A ++ M + + T ILL +CR R +D A+ ++H+
Sbjct: 508 GLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRD-----RKIDLALELWHQFLQ 562
Query: 114 FQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETID 173
L+ + +I L + A+ M ++V+ N L++ K ++ +
Sbjct: 563 SGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDS-N 621
Query: 174 SALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLI 233
A I+ M G QPD +Y T++ GLC VS A E F++ G P+V T+ L+
Sbjct: 622 RATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Query: 234 HGM 236
+
Sbjct: 682 RAV 684
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/463 (26%), Positives = 222/463 (47%), Gaps = 33/463 (7%)
Query: 7 FKWPKQITSSLVEQLIKAEKDINKAVLMF----DSATAEYSNGFRHDHTTFGVMISRLVA 62
+ + + SL+E+L + + N + +F D + ++S G F ++I +
Sbjct: 91 YTLARCLIKSLIERLKRHSEPSNMSHRLFNALEDIQSPKFSIG------VFSLLIMEFLE 144
Query: 63 ANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQ-- 120
F A + MK C L+I G R R D++ V D+QL ++
Sbjct: 145 MGLFEEALWVSREMK---CSPDSKACLSILNGLVR-RRRFDSVWV-----DYQLMISRGL 195
Query: 121 ----KSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSAL 176
Y + ++ + EM +GI P+V I I LC++ + ++ A
Sbjct: 196 VPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK-MEEAE 254
Query: 177 QIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGM 236
++F M G P+ YTY +I+G C+ G+V +A L+ E+ P+VV + +L+ G
Sbjct: 255 KMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGF 314
Query: 237 CQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNM 296
C++ L A L M K G++PN++ Y+ L+ G CK G+ L+A+ LL M + + P++
Sbjct: 315 CKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDV 374
Query: 297 VTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDE 356
TY LINGLC E + +EA + +M+ + + P++ Y +I G+C + + A + E
Sbjct: 375 FTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSE 434
Query: 357 MVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIK 416
M G+ P+ T+S T++ G C+ D A LY M +GI ++ T+ LI
Sbjct: 435 MTASGVEPNIITFS-------TLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALID 487
Query: 417 CFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
K ++ +A R+ +M+ G P+ + ++ G W ++
Sbjct: 488 AHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRL 530
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 201/433 (46%), Gaps = 20/433 (4%)
Query: 35 FDSATAEY----SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMK----QENCVVTED 86
FDS +Y S G D + V+ + E LL+ M + N +
Sbjct: 180 FDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTI 239
Query: 87 ILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREM 146
+L +CR ++ +A ++F M+ + +Y +ID + +V++A Y+E+
Sbjct: 240 YILDLCRD----NKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEI 295
Query: 147 RKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGS 206
+ P+VV L+ CK +E + +A +F M G P+ Y Y LI+G C+ G+
Sbjct: 296 LVAELLPNVVVFGTLVDGFCKARELV-TARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGN 354
Query: 207 VSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYST 266
+ EA L +EME SP V TYT LI+G+C D + EA RL ++MK I P+ TY++
Sbjct: 355 MLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNS 414
Query: 267 LMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQG 326
L+ G CK + QA++L M PN++T+ TLI+G C A+ + M ++G
Sbjct: 415 LIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKG 474
Query: 327 LKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSN 386
+ P+ Y +I ++ ++A +M+ GI P+ T++ +V G
Sbjct: 475 IVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFA-------CLVDGFWKE 527
Query: 387 VDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIW 446
A Y + F CLI+ C+ G + +A+R +M S G PD +
Sbjct: 528 GRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSY 587
Query: 447 DVVMGGLWDRKKV 459
++ G K++
Sbjct: 588 VSMLKGHLQEKRI 600
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 191/400 (47%), Gaps = 8/400 (2%)
Query: 43 SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPL 102
S G + + + + I L N+ AE + E MK+ + + GY +
Sbjct: 227 SLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVR 286
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
A ++ ++ +L + T++D + + A + + M K G+ P++ N LI
Sbjct: 287 QAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLI 346
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF 222
CK+ ++ A+ + EM + PD +TY LINGLC V+EA LF +M+ +
Sbjct: 347 HGHCKSGNMLE-AVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERI 405
Query: 223 SPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAME 282
PS TY SLIHG C+ N+ +A+ L EM +G+EPN+ T+STL+DG C AM
Sbjct: 406 FPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMG 465
Query: 283 LLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFC 342
L M K P++VTY LI+ KE EA+ + M G+ PN + ++ GF
Sbjct: 466 LYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFW 525
Query: 343 AASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTR 402
A +F E + R+ W+ HV +++GLC N RA + + MR+
Sbjct: 526 KEGRLSVAIDFYQEN-----NQQRSCWN-HVGF-TCLIEGLCQNGYILRASRFFSDMRSC 578
Query: 403 GISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPD 442
GI+ +I ++ ++K + + + +MI G +P+
Sbjct: 579 GITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPN 618
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 202/419 (48%), Gaps = 36/419 (8%)
Query: 48 HDHTTFGVMISRLVAANQFRSA----EGLLERMKQENCVVTEDILLTICRGYGRVHRPLD 103
+D +F +I L A+++ A + L+ER+K+ + P +
Sbjct: 73 NDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHS-------------------EPSN 113
Query: 104 -AIRVFHKMEDFQL-KFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNIL 161
+ R+F+ +ED Q KF+ + +I +E + A+ REM+ P S L+IL
Sbjct: 114 MSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMK--CSPDSKACLSIL 171
Query: 162 IKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKG 221
L + + DS + M +RG PD + Y L + G S+ ++L +EM G
Sbjct: 172 -NGLVRRRR-FDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLG 229
Query: 222 FSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAM 281
P+V YT I +C+ + + EA ++ E MKK+G+ PN++TYS ++DG CK G+ QA
Sbjct: 230 IKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAY 289
Query: 282 ELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGF 341
L + ++ PN+V +GTL++G CK + A + M G+ PN +Y +I G
Sbjct: 290 GLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGH 349
Query: 342 CAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRT 401
C + + +A + EM +SP T+++ ++ GLC A +L+ M+
Sbjct: 350 CKSGNMLEAVGLLSEMESLNLSPDVFTYTI-------LINGLCIEDQVAEANRLFQKMKN 402
Query: 402 RGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKVR 460
I T++ LI +CK ++ +A + EM + G P+ + ++ G + + ++
Sbjct: 403 ERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIK 461
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 156/343 (45%), Gaps = 3/343 (0%)
Query: 51 TTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHK 110
FG ++ A + +A L M + + + G+ + L+A+ + +
Sbjct: 305 VVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSE 364
Query: 111 MEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKE 170
ME L +Y +I+ L E+ V A +++M+ I PS + N LI CK +
Sbjct: 365 MESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCK-EY 423
Query: 171 TIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYT 230
++ AL + EM G +P+ T+ TLI+G C + + A L+ EM KG P VVTYT
Sbjct: 424 NMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYT 483
Query: 231 SLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTK 290
+LI + N+ EA+RL +M + GI PN T++ L+DG K G A++ + +
Sbjct: 484 ALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQ 543
Query: 291 HNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDA 350
+ N V + LI GLC+ G A MR G+ P+ Y ++ G D
Sbjct: 544 RSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDT 603
Query: 351 ANFIDEMVLGGISPSRATWSLHVRMH--NTVVQGLCSNVDSPR 391
+M+ GI P+ L R + N V+ C +S R
Sbjct: 604 MMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFLTNSSR 646
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 128/277 (46%), Gaps = 1/277 (0%)
Query: 49 DHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVF 108
D T+ ++I+ L +Q A L ++MK E + ++ GY + + A+ +
Sbjct: 373 DVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLC 432
Query: 109 HKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKN 168
+M ++ ++ T+ID +K A+ Y EM GI P VV+ LI A K
Sbjct: 433 SEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFK- 491
Query: 169 KETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVT 228
+ + AL+++ +M G P+ +T+ L++G + G +S A + + E ++ + V
Sbjct: 492 EANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVG 551
Query: 229 YTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMV 288
+T LI G+CQ+ + A R +M+ GI P++ +Y +++ G + M L M+
Sbjct: 552 FTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMI 611
Query: 289 TKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQ 325
PN++ L G A + + RL+
Sbjct: 612 KTGILPNLLVNQLLARFYQANGYVKSACFLTNSSRLK 648
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 199/381 (52%), Gaps = 12/381 (3%)
Query: 18 VEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMK 77
V++LI ++ D A +FD A+ + FRH ++ ++I +L F + +L + +
Sbjct: 54 VQKLIASQSDPLLAKEIFDYASQQ--PNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHR 111
Query: 78 QENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEEN-HV 136
+T +I + + Y P + F+KM +F K ++D+LV ++
Sbjct: 112 SSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYL 171
Query: 137 KRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGT 196
++A ++ R G+ P+ S N+L++A C N + + A Q+F +M R PD +Y
Sbjct: 172 QKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDD-LSIAYQLFGKMLERDVVPDVDSYKI 230
Query: 197 LINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNG 256
LI G CR G V+ A EL ++M KGF P ++YT+L++ +C+ L EA +LL MK G
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKG 290
Query: 257 IEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAV 316
P++ Y+T++ G C+ ++ A ++L+ M++ PN V+Y TLI GLC +G F E
Sbjct: 291 CNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGK 350
Query: 317 EILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMH 376
+ L+ M +G P+ + ++ GFC+ ++A + ++ ++ G + TW +
Sbjct: 351 KYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEM----- 405
Query: 377 NTVVQGLCSNVDSPRAFQLYL 397
V+ +C N D +L+L
Sbjct: 406 --VIPLIC-NEDESEKIKLFL 423
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 113/247 (45%), Gaps = 8/247 (3%)
Query: 214 FNEMEEKGFSPSVVTYTSLIHGMCQSDN-LGEAIRLLEEMKKNGIEPNVFTYSTLMDGLC 272
F +M E F+P ++ + L +A L + + +G+ PN +Y+ LM C
Sbjct: 142 FYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFC 201
Query: 273 KGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAG 332
A +L M+ + P++ +Y LI G C++G+ + A+E+LD M +G P+
Sbjct: 202 LNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRL 261
Query: 333 LYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRA 392
Y +++ C + ++A + M L G +P + NT++ G C + A
Sbjct: 262 SYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHY-------NTMILGFCREDRAMDA 314
Query: 393 FQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGG 452
++ M + G S ++ LI C +G ++ + LEEMIS G P + + ++ G
Sbjct: 315 RKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKG 374
Query: 453 LWDRKKV 459
KV
Sbjct: 375 FCSFGKV 381
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 12/183 (6%)
Query: 283 LLEMMVTKHNRPNMVTYGTLINGLCK---EGKFSEAV-EILDRMRLQGLKPNAGLYGKII 338
L++ ++ KH G + L K E K E V +M P +I+
Sbjct: 102 LIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRIL 161
Query: 339 SGFCAASSY-QDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYL 397
+ Y Q A L G+ P + R +N ++Q C N D A+QL+
Sbjct: 162 DVLVSHRGYLQKAFELFKSSRLHGVMP-------NTRSYNLLMQAFCLNDDLSIAYQLFG 214
Query: 398 SMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRK 457
M R + ++D++ LI+ FC++G +N A +L++M++ G VPD+ + ++ L +
Sbjct: 215 KMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKT 274
Query: 458 KVR 460
++R
Sbjct: 275 QLR 277
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 173/325 (53%), Gaps = 1/325 (0%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
GFRHD+ ++ +I +L + F + + +L ++ N E + + + + YG+ A
Sbjct: 76 GFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKA 135
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
I VFHK+ F T +S T+I++LV+ +++A +F+ + M + P+ VS NILIK
Sbjct: 136 IDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKG 195
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
+K ++A ++F EM QP TY +LI LCR + +AK L +M +K P
Sbjct: 196 FL-DKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRP 254
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
+ VT+ L+ G+C EA +L+ +M+ G +P + Y LM L K G +A LL
Sbjct: 255 NAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLL 314
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAA 344
M + +P++V Y L+N LC E + EA +L M+++G KPNA Y +I GFC
Sbjct: 315 GEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRI 374
Query: 345 SSYQDAANFIDEMVLGGISPSRATW 369
+ N ++ M+ P+ AT+
Sbjct: 375 EDFDSGLNVLNAMLASRHCPTPATF 399
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 170/356 (47%), Gaps = 8/356 (2%)
Query: 98 VHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVS 157
+ P +A+ +FH+ ++ + SY ++I L + + R +R +
Sbjct: 59 IEDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESL 118
Query: 158 LNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEM 217
LI+ K ++D A+ +FH++ + C + TLIN L G + +AK F+
Sbjct: 119 FMGLIQHYGK-AGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGA 177
Query: 218 EEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHS 277
++ P+ V++ LI G + A ++ +EM + ++P+V TY++L+ LC+
Sbjct: 178 KDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDM 237
Query: 278 LQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKI 337
+A LLE M+ K RPN VT+G L+ GLC +G+++EA +++ M +G KP YG +
Sbjct: 238 GKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGIL 297
Query: 338 ISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYL 397
+S +A + EM I P V ++N +V LC+ P A+++
Sbjct: 298 MSDLGKRGRIDEAKLLLGEMKKRRIKPD-------VVIYNILVNHLCTECRVPEAYRVLT 350
Query: 398 SMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
M+ +G T+ +I FC+ D + +L M++ P + ++ GL
Sbjct: 351 EMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGL 406
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 116/251 (46%), Gaps = 7/251 (2%)
Query: 209 EAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLM 268
EA LF++ +E GF +Y+SLI+ + +S N ++L ++ + + L+
Sbjct: 64 EALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLI 123
Query: 269 DGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLK 328
K G +A+++ + + + + TLIN L G+ +A D + L+
Sbjct: 124 QHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLR 183
Query: 329 PNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVD 388
PN+ + +I GF ++ A DEM+ + PS T+ N+++ LC N D
Sbjct: 184 PNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTY-------NSLIGFLCRNDD 236
Query: 389 SPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDV 448
+A L M + I TF L+K C +G+ N+A +++ +M GC P + +
Sbjct: 237 MGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGI 296
Query: 449 VMGGLWDRKKV 459
+M L R ++
Sbjct: 297 LMSDLGKRGRI 307
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 123/287 (42%), Gaps = 7/287 (2%)
Query: 167 KNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSV 226
K E + AL +FH+ G + D +Y +LI L + + ++ + +
Sbjct: 57 KEIEDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRE 116
Query: 227 VTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEM 286
+ LI ++ ++ +AI + ++ + + +TL++ L G +A +
Sbjct: 117 SLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDG 176
Query: 287 MVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASS 346
RPN V++ LI G + + A ++ D M ++P+ Y +I C
Sbjct: 177 AKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDD 236
Query: 347 YQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISI 406
A + +++M+ I P+ T+ L +++GLC + A +L M RG
Sbjct: 237 MGKAKSLLEDMIKKRIRPNAVTFGL-------LMKGLCCKGEYNEAKKLMFDMEYRGCKP 289
Query: 407 EIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
+ + L+ KRG +++A +L EM PD I+++++ L
Sbjct: 290 GLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHL 336
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 203/404 (50%), Gaps = 14/404 (3%)
Query: 49 DHTTFGVMISRLVAANQFRSAEGLLERMKQ---ENCVVTEDILLTICRGYGRVHRPLDAI 105
D +FG++I A + + LL + + VV L+ C G + + D
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKD-- 219
Query: 106 RVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKAL 165
+F +M L +++Y +I+ L + K+ Y +M++ G+ P++ + N ++ L
Sbjct: 220 -LFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278
Query: 166 CKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPS 225
CK+ T D A Q+F EM RG + TY TLI GLCR ++EA ++ ++M+ G +P+
Sbjct: 279 CKDGRTKD-AFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPN 337
Query: 226 VVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLE 285
++TY +LI G C LG+A+ L ++K G+ P++ TY+ L+ G C+ G + A ++++
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVK 397
Query: 286 MMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAAS 345
M + +P+ VTY LI+ + +A+++ M GL P+ Y +I GFC
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKG 457
Query: 346 SYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGIS 405
+A+ MV P+ ++NT++ G C S RA +L M + ++
Sbjct: 458 QMNEASRLFKSMVEKNCEPNEV-------IYNTMILGYCKEGSSYRALKLLKEMEEKELA 510
Query: 406 IEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVV 449
+ ++ +I+ CK +A R++E+MI G P I ++
Sbjct: 511 PNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 188 bits (477), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 180/331 (54%), Gaps = 8/331 (2%)
Query: 122 SYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHE 181
S+ +I E ++++ E+ + G P+VV LI CK E I+ A +F E
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGE-IEKAKDLFFE 223
Query: 182 MPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDN 241
M G + TY LINGL + G + E++ +M+E G P++ TY +++ +C+
Sbjct: 224 MGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGR 283
Query: 242 LGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGT 301
+A ++ +EM++ G+ N+ TY+TL+ GLC+ +A ++++ M + PN++TY T
Sbjct: 284 TKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNT 343
Query: 302 LINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGG 361
LI+G C GK +A+ + ++ +GL P+ Y ++SGFC AA + EM G
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG 403
Query: 362 ISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKR 421
I PS+ T+++ ++ + + +A QL LSM G+ ++ T+ LI FC +
Sbjct: 404 IKPSKVTYTI-------LIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIK 456
Query: 422 GDLNKAARILEEMISDGCVPDKGIWDVVMGG 452
G +N+A+R+ + M+ C P++ I++ ++ G
Sbjct: 457 GQMNEASRLFKSMVEKNCEPNEVIYNTMILG 487
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 173/342 (50%), Gaps = 19/342 (5%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQE---------NCVVTEDILLTICRGY 95
G + T+ V+I+ L + + E+M+++ NCV+ + +C+
Sbjct: 228 GLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQ-----LCKD- 281
Query: 96 GRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSV 155
R DA +VF +M + + +Y T+I L E + A +M+ GI P++
Sbjct: 282 ---GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNL 338
Query: 156 VSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFN 215
++ N LI C + + AL + ++ +RG P TY L++G CR G S A ++
Sbjct: 339 ITYNTLIDGFCGVGK-LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVK 397
Query: 216 EMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGG 275
EMEE+G PS VTYT LI +SDN+ +AI+L M++ G+ P+V TYS L+ G C G
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKG 457
Query: 276 HSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYG 335
+A L + MV K+ PN V Y T+I G CKEG A+++L M + L PN Y
Sbjct: 458 QMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYR 517
Query: 336 KIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHN 377
+I C ++A +++M+ GI PS + SL R N
Sbjct: 518 YMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRAKN 559
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 103/235 (43%), Gaps = 16/235 (6%)
Query: 229 YTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMV 288
Y +I+ QS +L +I EM NG P ++ L+ + Q
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFF---- 152
Query: 289 TKHNRPNMV----TYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAA 344
N+ +V ++G LI G C+ G+ ++ ++L + G PN +Y +I G C
Sbjct: 153 -NENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKK 211
Query: 345 SSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGI 404
+ A + EM G+ + T+++ ++ GL N + F++Y M+ G+
Sbjct: 212 GEIEKAKDLFFEMGKLGLVANERTYTV-------LINGLFKNGVKKQGFEMYEKMQEDGV 264
Query: 405 SIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
+ T++C++ CK G A ++ +EM G + ++ ++GGL K+
Sbjct: 265 FPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKL 319
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 185/383 (48%), Gaps = 31/383 (8%)
Query: 104 AIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIK 163
I +FH ME + SY VI+ L + A++ +M K G P VV+++ LI
Sbjct: 88 VISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLIN 147
Query: 164 ALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFS 223
C+ D A+ + +M G +PD Y T+I+G C++G V++A ELF+ ME G
Sbjct: 148 GFCQGNRVFD-AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVR 206
Query: 224 PSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMEL 283
VTY SL+ G+C S +A RL+ +M I PNV T++ ++D K G +AM+L
Sbjct: 207 ADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKL 266
Query: 284 LEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCA 343
E M + P++ TY +LINGLC G+ EA ++LD M +G P+ Y +I+GFC
Sbjct: 267 YEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCK 326
Query: 344 ASSYQDAANFIDEMVLGGISPSRATWSL-------------------------HVRMHNT 378
+ + EM G+ T++ ++R ++
Sbjct: 327 SKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSI 386
Query: 379 VVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDG 438
++ GLC N +A L+ +M+ I ++I T++ +I CK G++ A + + G
Sbjct: 387 LLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKG 446
Query: 439 CVPDKGIWDVVMGGL-----WDR 456
PD + ++ G WD+
Sbjct: 447 LKPDVVSYTTMISGFCRKRQWDK 469
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 185/370 (50%), Gaps = 26/370 (7%)
Query: 97 RVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVV 156
R R + A+ V KM F + + ++I+ + N V AI +M +MG P VV
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175
Query: 157 SLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNE 216
N +I CK ++ A+++F M G + D+ TY +L+ GLC G S+A L +
Sbjct: 176 IYNTIIDGSCK-IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRD 234
Query: 217 MEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGH 276
M + P+V+T+T++I + EA++L EEM + ++P+VFTY++L++GLC G
Sbjct: 235 MVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR 294
Query: 277 SLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGK 336
+A ++L++MVTK P++VTY TLING CK + E ++ M +GL + Y
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT 354
Query: 337 IISGFCAASSYQDAANFIDEM-----------VLGGI--------------SPSRATWSL 371
II G+ A A M +L G+ + ++ L
Sbjct: 355 IIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL 414
Query: 372 HVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARIL 431
+ +N V+ G+C + A+ L+ S+ +G+ ++ ++ +I FC++ +K+ +
Sbjct: 415 DITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLY 474
Query: 432 EEMISDGCVP 441
+M DG +P
Sbjct: 475 RKMQEDGLLP 484
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 175/354 (49%), Gaps = 26/354 (7%)
Query: 100 RPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLN 159
RPL +I F K V+ + + + I+ + M GI + S N
Sbjct: 64 RPLPSIVDFSK---------------VLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 160 ILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEE 219
I+I LC+ + AL + +M G +PD T +LING C+ V +A +L ++MEE
Sbjct: 109 IVINCLCRCSRFV-IALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEE 167
Query: 220 KGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQ 279
GF P VV Y ++I G C+ + +A+ L + M+++G+ + TY++L+ GLC G
Sbjct: 168 MGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSD 227
Query: 280 AMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIIS 339
A L+ MV + PN++T+ +I+ KEGKFSEA+++ + M + + P+ Y +I+
Sbjct: 228 AARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLIN 287
Query: 340 GFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSM 399
G C +A +D MV G P T +NT++ G C + +L+ M
Sbjct: 288 GLCMHGRVDEAKQMLDLMVTKGCLPDVVT-------YNTLINGFCKSKRVDEGTKLFREM 340
Query: 400 RTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
RG+ + T++ +I+ + + G + A I M S P+ + +++ GL
Sbjct: 341 AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGL 391
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 153/347 (44%), Gaps = 4/347 (1%)
Query: 18 VEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMK 77
V LI N+ D + GFR D + +I A L +RM+
Sbjct: 142 VSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRME 201
Query: 78 QENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVK 137
++ ++ G R DA R+ M + ++ VID+ V+E
Sbjct: 202 RDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFS 261
Query: 138 RAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTL 197
A+ Y EM + + P V + N LI LC + +D A Q+ M +GC PD TY TL
Sbjct: 262 EAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR-VDEAKQMLDLMVTKGCLPDVVTYNTL 320
Query: 198 INGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGI 257
ING C+ V E +LF EM ++G +TY ++I G Q+ A + M
Sbjct: 321 INGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS--- 377
Query: 258 EPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVE 317
PN+ TYS L+ GLC +A+ L E M ++ TY +I+G+CK G +A +
Sbjct: 378 RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWD 437
Query: 318 ILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISP 364
+ + +GLKP+ Y +ISGFC + + +M G+ P
Sbjct: 438 LFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 152/293 (51%), Gaps = 7/293 (2%)
Query: 167 KNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSV 226
++ ++ + +F +M P + +++ + + + LF+ ME G +
Sbjct: 45 RSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDL 104
Query: 227 VTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEM 286
+Y +I+ +C+ A+ ++ +M K G EP+V T S+L++G C+G A++L+
Sbjct: 105 YSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSK 164
Query: 287 MVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASS 346
M RP++V Y T+I+G CK G ++AVE+ DRM G++ +A Y +++G C +
Sbjct: 165 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224
Query: 347 YQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISI 406
+ DAA + +MV+ I P+ T++ V+ A +LY M R +
Sbjct: 225 WSDAARLMRDMVMRDIVPNVITFT-------AVIDVFVKEGKFSEAMKLYEEMTRRCVDP 277
Query: 407 EIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
++ T++ LI C G +++A ++L+ M++ GC+PD ++ ++ G K+V
Sbjct: 278 DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRV 330
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 166/319 (52%), Gaps = 13/319 (4%)
Query: 139 AIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLI 198
A +F +M K+G P +V+ LI C ++ A+ + ++M G +PD Y T+I
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNR-MEEAMSMVNQMVEMGIKPDVVMYTTII 184
Query: 199 NGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIE 258
+ LC+ G V+ A LF++ME G P VV YTSL++G+C S +A LL M K I+
Sbjct: 185 DSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIK 244
Query: 259 PNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEI 318
P+V T++ L+D K G L A EL M+ PN+ TY +LING C EG EA ++
Sbjct: 245 PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Query: 319 LDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNT 378
M +G P+ Y +I+GFC DA EM G++ + T++ T
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYT-------T 357
Query: 379 VVQGLCSNVDSPRAFQ-LYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMIS- 436
++QG V P Q ++ M +RG+ I T++ L+ C C G + KA I E+M
Sbjct: 358 LIQGF-GQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKR 416
Query: 437 --DGCVPDKGIWDVVMGGL 453
DG P+ ++V++ GL
Sbjct: 417 EMDGVAPNIWTYNVLLHGL 435
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 202/401 (50%), Gaps = 19/401 (4%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQ----ENCVVTEDILLTICRGYGRVHR 100
GF D TF +I+ N+ A ++ +M + + V+ I+ ++C+ G V+
Sbjct: 137 GFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKN-GHVNY 195
Query: 101 PLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNI 160
A+ +F +ME++ ++ Y ++++ L + A + R M K I P V++ N
Sbjct: 196 ---ALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNA 252
Query: 161 LIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
LI A K + +D A ++++EM P+ +TY +LING C G V EA+++F ME K
Sbjct: 253 LIDAFVKEGKFLD-AEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK 311
Query: 221 GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQA 280
G P VV YTSLI+G C+ + +A+++ EM + G+ N TY+TL+ G + G A
Sbjct: 312 GCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVA 371
Query: 281 MELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMR---LQGLKPNAGLYGKI 337
E+ MV++ PN+ TY L++ LC GK +A+ I + M+ + G+ PN Y +
Sbjct: 372 QEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVL 431
Query: 338 ISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYL 397
+ G C + A ++M + + + + ++QG+C A L+
Sbjct: 432 LHGLCYNGKLEKALMVFEDM-------RKREMDIGIITYTIIIQGMCKAGKVKNAVNLFC 484
Query: 398 SMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDG 438
S+ ++G+ + T+ +I + G ++A + +M DG
Sbjct: 485 SLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/416 (28%), Positives = 202/416 (48%), Gaps = 17/416 (4%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQ---ENCVVTEDILLTICRGYGRVHRP 101
G HD T ++++ ++Q A L +M + E +VT ++ G+ +R
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVT---FTSLINGFCLGNRM 158
Query: 102 LDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNIL 161
+A+ + ++M + +K Y T+ID L + HV A++ + +M GI P VV L
Sbjct: 159 EEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSL 218
Query: 162 IKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKG 221
+ LC + D A + M R +PD T+ LI+ + G +A+EL+NEM
Sbjct: 219 VNGLCNSGRWRD-ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS 277
Query: 222 FSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAM 281
+P++ TYTSLI+G C + EA ++ M+ G P+V Y++L++G CK AM
Sbjct: 278 IAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAM 337
Query: 282 ELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGF 341
++ M K N +TY TLI G + GK + A E+ M +G+ PN Y ++
Sbjct: 338 KIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCL 397
Query: 342 CAASSYQDAANFIDEMV---LGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLS 398
C + A ++M + G++P+ W+ +V +H GLC N +A ++
Sbjct: 398 CYNGKVKKALMIFEDMQKREMDGVAPN--IWTYNVLLH-----GLCYNGKLEKALMVFED 450
Query: 399 MRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLW 454
MR R + I I T+ +I+ CK G + A + + S G P+ + ++ GL+
Sbjct: 451 MRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLF 506
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 166/338 (49%), Gaps = 8/338 (2%)
Query: 123 YLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEM 182
+ +++++ + I ++ MG+ + + N+L+ C++ + A +M
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPY-LASSFLGKM 133
Query: 183 PNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNL 242
G +PD T+ +LING C + EA + N+M E G P VV YT++I +C++ ++
Sbjct: 134 MKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHV 193
Query: 243 GEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTL 302
A+ L ++M+ GI P+V Y++L++GLC G A LL M + +P+++T+ L
Sbjct: 194 NYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNAL 253
Query: 303 INGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGI 362
I+ KEGKF +A E+ + M + PN Y +I+GFC +A M G
Sbjct: 254 IDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGC 313
Query: 363 SPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRG 422
P ++ +++ G C A +++ M +G++ T+ LI+ F + G
Sbjct: 314 FPDVVAYT-------SLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVG 366
Query: 423 DLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKVR 460
N A + M+S G P+ ++V++ L KV+
Sbjct: 367 KPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVK 404
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 165/341 (48%), Gaps = 11/341 (3%)
Query: 116 LKFTQKSYLTVIDILVEENH---VKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETI 172
L F +++ +IL H A+ + M + PS++ L+ + K K+
Sbjct: 30 LSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKK-F 88
Query: 173 DSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSL 232
D + + + G D YT L+N C+ A +M + GF P +VT+TSL
Sbjct: 89 DVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSL 148
Query: 233 IHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHN 292
I+G C + + EA+ ++ +M + GI+P+V Y+T++D LCK GH A+ L + M
Sbjct: 149 INGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGI 208
Query: 293 RPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAAN 352
RP++V Y +L+NGLC G++ +A +L M + +KP+ + +I F + DA
Sbjct: 209 RPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEE 268
Query: 353 FIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFD 412
+EM+ I+P+ T++ +++ G C A Q++ M T+G ++ +
Sbjct: 269 LYNEMIRMSIAPNIFTYT-------SLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYT 321
Query: 413 CLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
LI FCK ++ A +I EM G + + ++ G
Sbjct: 322 SLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGF 362
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 172/366 (46%), Gaps = 15/366 (4%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILL--TICRGYGRVHRPL 102
G + D + +I L A L ++M EN + D+++ ++ G R
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQM--ENYGIRPDVVMYTSLVNGLCNSGRWR 229
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
DA + M ++K ++ +ID V+E A Y EM +M I P++ + LI
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF 222
C + +D A Q+F+ M +GC PD Y +LING C+ V +A ++F EM +KG
Sbjct: 290 NGFCM-EGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL 348
Query: 223 SPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAME 282
+ + +TYT+LI G Q A + M G+ PN+ TY+ L+ LC G +A+
Sbjct: 349 TGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALM 408
Query: 283 LLEMMVTKHN---RPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIIS 339
+ E M + PN+ TY L++GLC GK +A+ + + MR + + Y II
Sbjct: 409 IFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQ 468
Query: 340 GFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSM 399
G C A ++A N + G+ P+ T++ T++ GL A L+ M
Sbjct: 469 GMCKAGKVKNAVNLFCSLPSKGVKPNVVTYT-------TMISGLFREGLKHEAHVLFRKM 521
Query: 400 RTRGIS 405
+ G+S
Sbjct: 522 KEDGVS 527
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 184/355 (51%), Gaps = 14/355 (3%)
Query: 15 SSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLE 74
+++++ L K +N A+ +FD + G R D + +++ L + ++R A+ LL
Sbjct: 181 TTIIDSLCK-NGHVNYALSLFDQME---NYGIRPDVVMYTSLVNGLCNSGRWRDADSLLR 236
Query: 75 RMKQENC---VVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILV 131
M + V+T + L+ + + + LDA ++++M + +Y ++I+
Sbjct: 237 GMTKRKIKPDVITFNALID---AFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 132 EENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDS 191
E V A + M G P VV+ LI CK K+ +D A++IF+EM +G ++
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKK-VDDAMKIFYEMSQKGLTGNT 352
Query: 192 YTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEE 251
TY TLI G ++G + A+E+F+ M +G P++ TY L+H +C + + +A+ + E+
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412
Query: 252 MKK---NGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCK 308
M+K +G+ PN++TY+ L+ GLC G +A+ + E M + ++TY +I G+CK
Sbjct: 413 MQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCK 472
Query: 309 EGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGIS 363
GK AV + + +G+KPN Y +ISG +A +M G+S
Sbjct: 473 AGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 148/314 (47%), Gaps = 16/314 (5%)
Query: 155 VVSLNILIKALCKNKETI---------DSALQIFHEMPNRGCQPDSYTYGTLINGLCRMG 205
++ L+ ++A C +E + + AL +F M P + L+N + +M
Sbjct: 27 LLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMK 86
Query: 206 SVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYS 265
L + ++ G S + T L++ CQS A L +M K G EP++ T++
Sbjct: 87 KFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFT 146
Query: 266 TLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQ 325
+L++G C G +AM ++ MV +P++V Y T+I+ LCK G + A+ + D+M
Sbjct: 147 SLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENY 206
Query: 326 GLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCS 385
G++P+ +Y +++G C + ++DA + + M I P T+ N ++
Sbjct: 207 GIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITF-------NALIDAFVK 259
Query: 386 NVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGI 445
A +LY M I+ I T+ LI FC G +++A ++ M + GC PD
Sbjct: 260 EGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVA 319
Query: 446 WDVVMGGLWDRKKV 459
+ ++ G KKV
Sbjct: 320 YTSLINGFCKCKKV 333
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 188 bits (477), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 208/408 (50%), Gaps = 14/408 (3%)
Query: 49 DHTTFGVMISRLVAANQFRSAEGLLERMKQENC---VVTEDILLTICRGYGRVHRPLDAI 105
D + +I+ N+ A +L+RM+ ++ VT +I++ G++ A+
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDL---AL 213
Query: 106 RVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKAL 165
+V +++ + T +Y +I+ + E V A+ EM G+ P + + N +I+ +
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 166 CKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPS 225
CK + +D A ++ + +GC+PD +Y L+ L G E ++L +M + P+
Sbjct: 274 CK-EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332
Query: 226 VVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLE 285
VVTY+ LI +C+ + EA+ LL+ MK+ G+ P+ ++Y L+ C+ G A+E LE
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392
Query: 286 MMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAAS 345
M++ P++V Y T++ LCK GK +A+EI ++ G PN+ Y + S ++
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
Query: 346 SYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGIS 405
A + I EM+ GI P T+ N+++ LC AF+L + MR+
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITY-------NSMISCLCREGMVDEAFELLVDMRSCEFH 505
Query: 406 IEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
+ T++ ++ FCK + A +LE M+ +GC P++ + V++ G+
Sbjct: 506 PSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 203/416 (48%), Gaps = 21/416 (5%)
Query: 43 SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILL--TICRGYGRVHR 100
S GFR T + R + + + LLE M ++ D++L + +G+ +
Sbjct: 84 SLGFRD--TQMLKIFHRSCRSGNYIESLHLLETMVRKG--YNPDVILCTKLIKGFFTLRN 139
Query: 101 PLDAIRVFHKMEDFQLKFTQK---SYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVS 157
A+RV +E KF Q +Y +I+ + N + A MR P V+
Sbjct: 140 IPKAVRVMEILE----KFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVT 195
Query: 158 LNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEM 217
NI+I +LC ++ +D AL++ +++ + CQP TY LI G V EA +L +EM
Sbjct: 196 YNIMIGSLC-SRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEM 254
Query: 218 EEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHS 277
+G P + TY ++I GMC+ + A ++ ++ G EP+V +Y+ L+ L G
Sbjct: 255 LSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKW 314
Query: 278 LQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKI 337
+ +L+ M ++ PN+VTY LI LC++GK EA+ +L M+ +GL P+A Y +
Sbjct: 315 EEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPL 374
Query: 338 ISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYL 397
I+ FC A F++ M+ G P + NTV+ LC N + +A +++
Sbjct: 375 IAAFCREGRLDVAIEFLETMISDGCLPDIVNY-------NTVLATLCKNGKADQALEIFG 427
Query: 398 SMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
+ G S +++ + GD +A ++ EM+S+G PD+ ++ ++ L
Sbjct: 428 KLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCL 483
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 174/370 (47%), Gaps = 44/370 (11%)
Query: 43 SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENC---VVTEDILLTICRGYGRVH 99
S F D T+ +MI L + + A +L ++ +NC V+T IL+ G V
Sbjct: 186 SKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVD 245
Query: 100 RPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLN 159
+A+++ +M LK +Y T+I + +E V RA R + G P V+S N
Sbjct: 246 ---EALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYN 302
Query: 160 ILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEE 219
IL++AL N+ + ++ +M + C P+ TY LI LCR G + EA L M+E
Sbjct: 303 ILLRALL-NQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKE 361
Query: 220 KGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQ 279
KG +P +Y LI C+ L AI LE M +G P++ Y+T++ LCK G + Q
Sbjct: 362 KGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQ 421
Query: 280 AME------------------------------------LLEMMVTKHNRPNMVTYGTLI 303
A+E +LEMM + P+ +TY ++I
Sbjct: 422 ALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGID-PDEITYNSMI 480
Query: 304 NGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGIS 363
+ LC+EG EA E+L MR P+ Y ++ GFC A +DA N ++ MV G
Sbjct: 481 SCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCR 540
Query: 364 PSRATWSLHV 373
P+ T+++ +
Sbjct: 541 PNETTYTVLI 550
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 171/352 (48%), Gaps = 10/352 (2%)
Query: 10 PKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSA 69
P IT +++ + E +++A+ + D S G + D T+ +I + A
Sbjct: 226 PTVITYTILIEATMLEGGVDEALKLMDEM---LSRGLKPDMFTYNTIIRGMCKEGMVDRA 282
Query: 70 EGLLERMKQENC---VVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTV 126
++ ++ + C V++ +ILL G+ + ++ KM + +Y +
Sbjct: 283 FEMVRNLELKGCEPDVISYNILLRALLNQGKWE---EGEKLMTKMFSEKCDPNVVTYSIL 339
Query: 127 IDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRG 186
I L + ++ A+ + M++ G+ P S + LI A C+ +D A++ M + G
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGR-LDVAIEFLETMISDG 398
Query: 187 CQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAI 246
C PD Y T++ LC+ G +A E+F ++ E G SP+ +Y ++ + S + A+
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458
Query: 247 RLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGL 306
++ EM NGI+P+ TY++++ LC+ G +A ELL M + P++VTY ++ G
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 518
Query: 307 CKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMV 358
CK + +A+ +L+ M G +PN Y +I G A +A +++V
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 119/227 (52%), Gaps = 8/227 (3%)
Query: 232 LIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKH 291
+ H C+S N E++ LLE M + G P+V + L+ G + +A+ ++E++ K
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEIL-EKF 153
Query: 292 NRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAA 351
+P++ Y LING CK + +A +LDRMR + P+ Y +I C+ A
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 352 NFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTF 411
+++++ P+ T+++ + T+++G VD A +L M +RG+ ++ T+
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEA--TMLEG---GVD--EALKLMDEMLSRGLKPDMFTY 266
Query: 412 DCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKK 458
+ +I+ CK G +++A ++ + GC PD +++++ L ++ K
Sbjct: 267 NTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGK 313
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/315 (34%), Positives = 154/315 (48%), Gaps = 12/315 (3%)
Query: 146 MRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMG 205
M + G P VV+ L+ LC + AL + M G QP YGT+INGLC+MG
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVL-QALALVDRMVEEGHQP----YGTIINGLCKMG 55
Query: 206 SVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYS 265
A L ++MEE VV Y ++I +C+ + A L EM GI P+V TYS
Sbjct: 56 DTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYS 115
Query: 266 TLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQ 325
++D C+ G A +LL M+ + P++VT+ LIN L KEGK SEA EI M +
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 326 GLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCS 385
G+ P Y +I GFC DA +D M SP T+S T++ G C
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFS-------TLINGYCK 228
Query: 386 NVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGI 445
+++ M RGI T+ LI FC+ GDL+ A +L MIS G P+
Sbjct: 229 AKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYIT 288
Query: 446 WDVVMGGLWDRKKVR 460
+ ++ L +K++R
Sbjct: 289 FQSMLASLCSKKELR 303
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 158/313 (50%), Gaps = 5/313 (1%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
G R D TF +++ L + A L++RM +E TI G ++ A
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEG----HQPYGTIINGLCKMGDTESA 60
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
+ + KME+ +K Y +ID L ++ H A + EM GI P V++ + +I +
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
C++ D A Q+ +M R PD T+ LIN L + G VSEA+E++ +M +G P
Sbjct: 121 FCRSGRWTD-AEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFP 179
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
+ +TY S+I G C+ D L +A R+L+ M P+V T+STL++G CK ME+
Sbjct: 180 TTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIF 239
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAA 344
M + N VTY TLI+G C+ G A ++L+ M G+ PN + +++ C+
Sbjct: 240 CEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSK 299
Query: 345 SSYQDAANFIDEM 357
+ A ++++
Sbjct: 300 KELRKAFAILEDL 312
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 154/296 (52%), Gaps = 12/296 (4%)
Query: 100 RPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLN 159
R L A+ + +M ++ + Y T+I+ L + + A+ +M + I VV N
Sbjct: 25 RVLQALALVDRM----VEEGHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYN 80
Query: 160 ILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEE 219
+I LCK+ I A +F EM ++G PD TY +I+ CR G ++A++L +M E
Sbjct: 81 AIIDRLCKDGHHI-HAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIE 139
Query: 220 KGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQ 279
+ +P VVT+++LI+ + + + EA + +M + GI P TY++++DG CK
Sbjct: 140 RQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLND 199
Query: 280 AMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIIS 339
A +L+ M +K P++VT+ TLING CK + +EI M +G+ N Y +I
Sbjct: 200 AKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIH 259
Query: 340 GFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQL 395
GFC A + ++ M+ G++P+ T+ +++ LCS + +AF +
Sbjct: 260 GFCQVGDLDAAQDLLNVMISSGVAPNYITF-------QSMLASLCSKKELRKAFAI 308
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 120/246 (48%), Gaps = 11/246 (4%)
Query: 13 ITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGL 72
I ++++++L K I+ L T + G D T+ MI + ++ AE L
Sbjct: 78 IYNAIIDRLCKDGHHIHAQNLF----TEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQL 133
Query: 73 LERMKQENC---VVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDI 129
L M + VVT L+ G+V +A ++ M + T +Y ++ID
Sbjct: 134 LRDMIERQINPDVVTFSALINALVKEGKVS---EAEEIYGDMLRRGIFPTTITYNSMIDG 190
Query: 130 LVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQP 189
+++ + A M P VV+ + LI CK K +D+ ++IF EM RG
Sbjct: 191 FCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKR-VDNGMEIFCEMHRRGIVA 249
Query: 190 DSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLL 249
++ TY TLI+G C++G + A++L N M G +P+ +T+ S++ +C L +A +L
Sbjct: 250 NTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAIL 309
Query: 250 EEMKKN 255
E+++K+
Sbjct: 310 EDLQKS 315
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 183/350 (52%), Gaps = 8/350 (2%)
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
DA+ +F +M + + + + ++ + ++M GI ++ +L+I+I
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF 222
C+ ++ + A ++ G +PD+ T+ TLINGLC G VSEA EL + M E G
Sbjct: 115 NCCCRCRK-LSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 223 SPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAME 282
P+++T +L++G+C + + +A+ L++ M + G +PN TY ++ +CK G + AME
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 283 LLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFC 342
LL M + + + V Y +I+GLCK+G A + + M ++G K + +Y +I GFC
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 343 AASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTR 402
A + D A + +M+ I+P +S ++ A +L+ M R
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFS-------ALIDCFVKEGKLREAEELHKEMIQR 346
Query: 403 GISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGG 452
GIS + T+ LI FCK L+KA +L+ M+S GC P+ +++++ G
Sbjct: 347 GISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILING 396
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/449 (25%), Positives = 212/449 (47%), Gaps = 29/449 (6%)
Query: 30 KAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILL 89
K L F + G+ D TF +I+ L + A L++RM + T L
Sbjct: 122 KLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLN 181
Query: 90 TICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKM 149
+ G + DA+ + +M + + + +Y V+ ++ + A+ R+M +
Sbjct: 182 ALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241
Query: 150 GIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSE 209
I V +I+I LCK+ ++D+A +F+EM +G + D Y TLI G C G +
Sbjct: 242 KIKLDAVKYSIIIDGLCKDG-SLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDD 300
Query: 210 AKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMD 269
+L +M ++ +P VV +++LI + L EA L +EM + GI P+ TY++L+D
Sbjct: 301 GAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLID 360
Query: 270 GLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKP 329
G CK +A +L++MV+K PN+ T+ LING CK + +E+ +M L+G+
Sbjct: 361 GFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVA 420
Query: 330 NAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATW-------------------- 369
+ Y +I GFC + A EMV + P ++
Sbjct: 421 DTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIF 480
Query: 370 --------SLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKR 421
L + ++N ++ G+C+ A+ L+ S+ +G+ ++ T++ +I CK+
Sbjct: 481 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKK 540
Query: 422 GDLNKAARILEEMISDGCVPDKGIWDVVM 450
G L++A + +M DG P+ +++++
Sbjct: 541 GSLSEADLLFRKMEEDGHSPNGCTYNILI 569
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 124/430 (28%), Positives = 210/430 (48%), Gaps = 14/430 (3%)
Query: 33 LMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFR---SAEGLLERMKQENCVVTEDILL 89
L+ D G H+ T +MI+ + SA G + ++ E VT L+
Sbjct: 90 LVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLI 149
Query: 90 TICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKM 149
GRV +A+ + +M + K T + +++ L V A+ M +
Sbjct: 150 NGLCLEGRVS---EALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVET 206
Query: 150 GIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSE 209
G P+ V+ ++K +CK+ +T A+++ +M R + D+ Y +I+GLC+ GS+
Sbjct: 207 GFQPNEVTYGPVLKVMCKSGQTA-LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDN 265
Query: 210 AKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMD 269
A LFNEME KGF ++ YT+LI G C + + +LL +M K I P+V +S L+D
Sbjct: 266 AFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALID 325
Query: 270 GLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKP 329
K G +A EL + M+ + P+ VTY +LI+G CKE + +A +LD M +G P
Sbjct: 326 CFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP 385
Query: 330 NAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDS 389
N + +I+G+C A+ D +M L G+ T+ NT++QG C
Sbjct: 386 NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTY-------NTLIQGFCELGKL 438
Query: 390 PRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVV 449
A +L+ M +R + +I ++ L+ C G+ KA I E++ D GI++++
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 450 MGGLWDRKKV 459
+ G+ + KV
Sbjct: 499 IHGMCNASKV 508
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 207/428 (48%), Gaps = 11/428 (2%)
Query: 28 INKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDI 87
++ AVL+ D GF+ + T+G ++ + + Q A LL +M++ +
Sbjct: 193 VSDAVLLIDRMV---ETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 88 LLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMR 147
I G + +A +F++ME K Y T+I R+M
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 148 KMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSV 207
K I P VV+ + LI K + + A ++ EM RG PD+ TY +LI+G C+ +
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGK-LREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368
Query: 208 SEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTL 267
+A + + M KG P++ T+ LI+G C+++ + + + L +M G+ + TY+TL
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428
Query: 268 MDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGL 327
+ G C+ G A EL + MV++ RP++V+Y L++GLC G+ +A+EI +++ +
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488
Query: 328 KPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNV 387
+ + G+Y II G C AS DA + + L G+ P V+ +N ++ GLC
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPD-------VKTYNIMIGGLCKKG 541
Query: 388 DSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWD 447
A L+ M G S T++ LI+ GD K+A+++EE+ G D
Sbjct: 542 SLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVK 601
Query: 448 VVMGGLWD 455
+V+ L D
Sbjct: 602 MVVDMLSD 609
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 134/270 (49%), Gaps = 7/270 (2%)
Query: 173 DSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSL 232
D A+ +F EM +P + L + + R +L +ME KG + ++ T + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 233 IHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHN 292
I+ C+ L A + ++ K G EP+ T+STL++GLC G +A+EL++ MV +
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 293 RPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAAN 352
+P ++T L+NGLC GK S+AV ++DRM G +PN YG ++ C + A
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 353 FIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFD 412
+ +M I +S+ ++ GLC + AF L+ M +G +I +
Sbjct: 234 LLRKMEERKIKLDAVKYSI-------IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYT 286
Query: 413 CLIKCFCKRGDLNKAARILEEMISDGCVPD 442
LI+ FC G + A++L +MI PD
Sbjct: 287 TLIRGFCYAGRWDDGAKLLRDMIKRKITPD 316
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 129/266 (48%), Gaps = 6/266 (2%)
Query: 10 PKQIT-SSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRS 68
P +T +SL++ K E ++KA M D S G + TF ++I+ AN
Sbjct: 350 PDTVTYTSLIDGFCK-ENQLDKANHMLDLMV---SKGCGPNIRTFNILINGYCKANLIDD 405
Query: 69 AEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVID 128
L +M V T+ +G+ + + A +F +M +++ SY ++D
Sbjct: 406 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLD 465
Query: 129 ILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQ 188
L + ++A+ + ++ K + + NI+I +C N +D A +F +P +G +
Sbjct: 466 GLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC-NASKVDDAWDLFCSLPLKGVK 524
Query: 189 PDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRL 248
PD TY +I GLC+ GS+SEA LF +MEE G SP+ TY LI + ++ +L
Sbjct: 525 PDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKL 584
Query: 249 LEEMKKNGIEPNVFTYSTLMDGLCKG 274
+EE+K+ G + T ++D L G
Sbjct: 585 IEEIKRCGFSVDASTVKMVVDMLSDG 610
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 228/454 (50%), Gaps = 16/454 (3%)
Query: 11 KQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAE 70
K I+ L+K E+D + +F+ A+ + GF H++ T+ V++ LV +F + +
Sbjct: 52 KFISHESAVSLMKRERDPQGVLDIFNKASQQ--KGFNHNNATYSVLLDNLVRHKKFLAVD 109
Query: 71 GLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDF-QLKFTQKSYLTVIDI 129
+L +MK E C E + L + R + R + +F+ ++ ++K + + T +++
Sbjct: 110 AILHQMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNL 169
Query: 130 LVE--ENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGC 187
L++ E ++ R + Y + +G+ P+ NIL+K CKN + I+ A + EM G
Sbjct: 170 LIDSGEVNLSRKLLLYAK-HNLGLQPNTCIFNILVKHHCKNGD-INFAFLVVEEMKRSGI 227
Query: 188 Q-PDSYTYGTLINGLCRMGSVSEAKELFNEM-EEKGFSPSVVTYTSLIHGMCQSDNLGEA 245
P+S TY TL++ L EA ELF +M ++G SP VT+ +I+G C++ + A
Sbjct: 228 SYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERA 287
Query: 246 IRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING 305
++L+ MKKNG PNV+ YS LM+G CK G +A + + + + + V Y TL+N
Sbjct: 288 KKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNC 347
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPS 365
C+ G+ EA+++L M+ + + Y I+ G + ++A +D+ G+ +
Sbjct: 348 FCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLN 407
Query: 366 RATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLN 425
+ ++ + ++ LC N + +A + M RGI T++ L+ C+ G
Sbjct: 408 KGSYRI-------ILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTE 460
Query: 426 KAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
R+L + G +P W V+ + +K+
Sbjct: 461 IGVRVLIGFLRIGLIPGPKSWGAVVESICKERKL 494
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 122/254 (48%), Gaps = 12/254 (4%)
Query: 212 ELFNEM-EEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDG 270
++FN+ ++KGF+ + TY+ L+ + + +L +MK + LM
Sbjct: 74 DIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRH 133
Query: 271 LCKGGHSLQAMELLEMM-VTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQ-GLK 328
+ + ME+ ++ V +P++ T +N L G+ + + ++L + GL+
Sbjct: 134 FSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQ 193
Query: 329 PNAGLYGKIISGFCAASSYQDAANFIDEMVLGGIS-PSRATWSLHVRMHNTVVQGLCSNV 387
PN ++ ++ C A ++EM GIS P+ T+S T++ L ++
Sbjct: 194 PNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYS-------TLMDCLFAHS 246
Query: 388 DSPRAFQLYLSMRTR-GISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIW 446
S A +L+ M ++ GIS + TF+ +I FC+ G++ +A +IL+ M +GC P+ +
Sbjct: 247 RSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNY 306
Query: 447 DVVMGGLWDRKKVR 460
+M G K++
Sbjct: 307 SALMNGFCKVGKIQ 320
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 211/441 (47%), Gaps = 11/441 (2%)
Query: 16 SLVE--QLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLL 73
S+VE +L+ A +NK L+ + G H+ T+ + I+ +Q A +L
Sbjct: 74 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAIL 133
Query: 74 ERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEE 133
+M + + L ++ G+ +R +A+ + +M + + ++ T++ L +
Sbjct: 134 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 193
Query: 134 NHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYT 193
N A+A M G P +V+ +I LCK E D AL + ++M + D
Sbjct: 194 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP-DLALNLLNKMEKGKIEADVVI 252
Query: 194 YGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMK 253
Y T+I+GLC+ + +A +LFN+ME KG P V TY LI +C +A RLL +M
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 254 KNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMV-TKHNRPNMVTYGTLINGLCKEGKF 312
+ I P++ ++ L+D K G ++A +L + MV +KH P++V Y TLI G CK +
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 313 SEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLH 372
E +E+ M +GL N Y +I GF A +A +MV G+ P T+
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTY--- 429
Query: 373 VRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILE 432
N ++ GLC+N + A ++ M+ R + ++I T+ +I+ CK G + +
Sbjct: 430 ----NILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFC 485
Query: 433 EMISDGCVPDKGIWDVVMGGL 453
+ G P+ + +M G
Sbjct: 486 SLSLKGVKPNVVTYTTMMSGF 506
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 181/356 (50%), Gaps = 7/356 (1%)
Query: 104 AIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIK 163
I + +M++ + +Y I+ + + A+A +M K+G PS+V+LN L+
Sbjct: 94 VISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLN 153
Query: 164 ALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFS 223
C I A+ + +M G QPD+ T+ TL++GL + SEA L M KG
Sbjct: 154 GFCHGNR-ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ 212
Query: 224 PSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMEL 283
P +VTY ++I+G+C+ A+ LL +M+K IE +V Y+T++DGLCK H A +L
Sbjct: 213 PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDL 272
Query: 284 LEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCA 343
M TK +P++ TY LI+ LC G++S+A +L M + + P+ + +I F
Sbjct: 273 FNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVK 332
Query: 344 ASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRG 403
+A DEMV S+ + V +NT+++G C +++ M RG
Sbjct: 333 EGKLVEAEKLYDEMV-----KSKHCFP-DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRG 386
Query: 404 ISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
+ T+ LI F + D + A + ++M+SDG PD +++++ GL + V
Sbjct: 387 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNV 442
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 201/435 (46%), Gaps = 46/435 (10%)
Query: 28 INKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDI 87
I++AV + D G++ D TF ++ L N+ A L+ERM + C
Sbjct: 161 ISEAVALVDQMV---EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVT 217
Query: 88 LLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMR 147
+ G + P A+ + +KME +++ Y T+ID L + H+ A + +M
Sbjct: 218 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKME 277
Query: 148 KMGIPPSVVSLNILIKALCKNKETIDS--------------------------------- 174
GI P V + N LI LC D+
Sbjct: 278 TKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLV 337
Query: 175 -ALQIFHEM-PNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSL 232
A +++ EM ++ C PD Y TLI G C+ V E E+F EM ++G + VTYT+L
Sbjct: 338 EAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL 397
Query: 233 IHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHN 292
IHG Q+ + A + ++M +G+ P++ TY+ L+DGLC G+ A+ + E M +
Sbjct: 398 IHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDM 457
Query: 293 RPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAAN 352
+ ++VTY T+I LCK GK + ++ + L+G+KPN Y ++SGFC ++A
Sbjct: 458 KLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 517
Query: 353 FIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFD 412
EM G P+ T+ NT+++ + D + +L MR+ G + + TF
Sbjct: 518 LFVEMKEDGPLPNSGTY-------NTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFG 570
Query: 413 CLIKCFCKRGDLNKA 427
L+ G L+K+
Sbjct: 571 -LVTNMLHDGRLDKS 584
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 178/331 (53%), Gaps = 9/331 (2%)
Query: 130 LVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQP 189
++++ + AI + +M K PS+V + L+ A+ K + D + + +M N G
Sbjct: 50 VLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNK-FDLVISLGEQMQNLGISH 108
Query: 190 DSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLL 249
+ YTY IN CR +S A + +M + G+ PS+VT SL++G C + + EA+ L+
Sbjct: 109 NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 168
Query: 250 EEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKE 309
++M + G +P+ T++TL+ GL + + +A+ L+E MV K +P++VTYG +INGLCK
Sbjct: 169 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 228
Query: 310 GKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATW 369
G+ A+ +L++M ++ + +Y II G C DA + ++M GI P T+
Sbjct: 229 GEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288
Query: 370 SLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAAR 429
N ++ LC+ A +L M + I+ ++ F+ LI F K G L +A +
Sbjct: 289 -------NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEK 341
Query: 430 ILEEMI-SDGCVPDKGIWDVVMGGLWDRKKV 459
+ +EM+ S C PD ++ ++ G K+V
Sbjct: 342 LYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 210/425 (49%), Gaps = 18/425 (4%)
Query: 35 FDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQE----NCVVTEDILLT 90
F+ A GF T+ +I+ L ++ A+ + M + + +L+
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 349
Query: 91 ICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMG 150
C+ G V ++ +VF M + + +++ + ++ +A+ ++ +++ G
Sbjct: 350 ACKK-GDV---VETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 151 IPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEA 210
+ P V ILI+ C+ K I A+ + +EM +GC D TY T+++GLC+ + EA
Sbjct: 406 LIPDNVIYTILIQGYCR-KGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEA 464
Query: 211 KELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDG 270
+LFNEM E+ P T T LI G C+ NL A+ L ++MK+ I +V TY+TL+DG
Sbjct: 465 DKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDG 524
Query: 271 LCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPN 330
K G A E+ MV+K P ++Y L+N LC +G +EA + D M + +KP
Sbjct: 525 FGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPT 584
Query: 331 AGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSP 390
+ +I G+C + + D +F+++M+ G P ++ NT++ G +
Sbjct: 585 VMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISY-------NTLIYGFVREENMS 637
Query: 391 RAFQLYLSMRTR--GISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDV 448
+AF L M G+ ++ T++ ++ FC++ + +A +L +MI G PD+ +
Sbjct: 638 KAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTC 697
Query: 449 VMGGL 453
++ G
Sbjct: 698 MINGF 702
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/489 (23%), Positives = 209/489 (42%), Gaps = 59/489 (12%)
Query: 16 SLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLER 75
++VE L + D+ D + N F+H + MI LV + + A+ L R
Sbjct: 80 AVVEVLYRCRNDLTLGQRFVDQLGFHFPN-FKHTSLSLSAMIHILVRSGRLSDAQSCLLR 138
Query: 76 MKQE-----------------NCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKF 118
M + NC + + + R Y + + +A F +
Sbjct: 139 MIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTV 198
Query: 119 TQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKN---------- 168
+ + +I LV V+ A Y+E+ + G+ +V +LNI++ ALCK+
Sbjct: 199 SIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFL 258
Query: 169 ------------------------KETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRM 204
K ++ A ++ + MP +G P YTY T+INGLC+
Sbjct: 259 SQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKH 318
Query: 205 GSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTY 264
G AKE+F EM G SP TY SL+ C+ ++ E ++ +M+ + P++ +
Sbjct: 319 GKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCF 378
Query: 265 STLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRL 324
S++M + G+ +A+ + P+ V Y LI G C++G S A+ + + M
Sbjct: 379 SSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQ 438
Query: 325 QGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLC 384
QG + Y I+ G C +A +EM + P T ++ ++ G C
Sbjct: 439 QGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI-------LIDGHC 491
Query: 385 SNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKG 444
+ A +L+ M+ + I +++ T++ L+ F K GD++ A I +M+S +P
Sbjct: 492 KLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPI 551
Query: 445 IWDVVMGGL 453
+ +++ L
Sbjct: 552 SYSILVNAL 560
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 178/358 (49%), Gaps = 8/358 (2%)
Query: 10 PKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSA 69
P + S + L +++KA++ F+S G D+ + ++I A
Sbjct: 373 PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA---GLIPDNVIYTILIQGYCRKGMISVA 429
Query: 70 EGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTV-ID 128
L M Q+ C + TI G + +A ++F++M + L F LT+ ID
Sbjct: 430 MNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERAL-FPDSYTLTILID 488
Query: 129 ILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQ 188
+ +++ A+ +++M++ I VV+ N L+ K + ID+A +I+ +M ++
Sbjct: 489 GHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD-IDTAKEIWADMVSKEIL 547
Query: 189 PDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRL 248
P +Y L+N LC G ++EA +++EM K P+V+ S+I G C+S N +
Sbjct: 548 PTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESF 607
Query: 249 LEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNR--PNMVTYGTLINGL 306
LE+M G P+ +Y+TL+ G + + +A L++ M + P++ TY ++++G
Sbjct: 608 LEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGF 667
Query: 307 CKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISP 364
C++ + EA +L +M +G+ P+ Y +I+GF + + +A DEM+ G SP
Sbjct: 668 CRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 146/288 (50%), Gaps = 3/288 (1%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
G D T+ ++ L A+ L M + L + G+ ++ +A
Sbjct: 440 GCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNA 499
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
+ +F KM++ +++ +Y T++D + + A + +M I P+ +S +IL+ A
Sbjct: 500 MELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNA 559
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
LC +K + A +++ EM ++ +P ++I G CR G+ S+ + +M +GF P
Sbjct: 560 LC-SKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVP 618
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMK--KNGIEPNVFTYSTLMDGLCKGGHSLQAME 282
++Y +LI+G + +N+ +A L+++M+ + G+ P+VFTY++++ G C+ +A
Sbjct: 619 DCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEV 678
Query: 283 LLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPN 330
+L M+ + P+ TY +ING + +EA I D M +G P+
Sbjct: 679 VLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 140/300 (46%), Gaps = 8/300 (2%)
Query: 158 LNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEM 217
++LI+ + ++ + A + F + ++G LI L R+G V A ++ E+
Sbjct: 168 FDLLIRTYVQARK-LREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 218 EEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHS 277
G +V T +++ +C+ + + L ++++ G+ P++ TY+TL+ G
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 278 LQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKI 337
+A EL+ M K P + TY T+INGLCK GK+ A E+ M GL P++ Y +
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 338 ISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYL 397
+ C + +M + P +S + + N+D +A +
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR-----SGNLD--KALMYFN 399
Query: 398 SMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRK 457
S++ G+ + + LI+ +C++G ++ A + EM+ GC D ++ ++ GL RK
Sbjct: 400 SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 201/444 (45%), Gaps = 51/444 (11%)
Query: 44 NGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLD 103
NG + + T+G IS + A++F SA+ ++ M++ + + + + Y + + ++
Sbjct: 516 NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIE 575
Query: 104 AIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIK 163
A + M D + K+Y +++ L + + V A +REMR GI P V S +LI
Sbjct: 576 ACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635
Query: 164 ALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFS 223
K + A IF EM G P+ Y L+ G CR G + +AKEL +EM KG
Sbjct: 636 GFSK-LGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 224 PSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLC----------- 272
P+ VTY ++I G C+S +L EA RL +EMK G+ P+ F Y+TL+DG C
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Query: 273 -----------------------KGGHSLQAMELLEMMVT----KHNRPNMVTYGTLING 305
K G + E+L ++ + +PN VTY +I+
Sbjct: 755 FGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDY 814
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPS 365
LCKEG A E+ +M+ L P Y +++G+ + DE + GI P
Sbjct: 815 LCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPD 874
Query: 366 RATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTR-----GISIEIDTFDCLIKCFCK 420
H+ M++ ++ + +A L M + G + I T L+ F K
Sbjct: 875 ------HI-MYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAK 927
Query: 421 RGDLNKAARILEEMISDGCVPDKG 444
G++ A +++E M+ +PD
Sbjct: 928 VGEMEVAEKVMENMVRLQYIPDSA 951
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 196/423 (46%), Gaps = 17/423 (4%)
Query: 39 TAEYSNGFRHDHTTFGVMISR---------LVAANQFRSAEGLLERMKQENCVVTEDILL 89
A+ + G H+ + G+ I + A+ L + M +
Sbjct: 327 NADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYA 386
Query: 90 TICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKM 149
++ GY R + +M+ + + +Y TV+ + + A +EM
Sbjct: 387 SLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS 446
Query: 150 GIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSE 209
G P+VV LIK +N D A+++ EM +G PD + Y +LI GL + + E
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGD-AMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDE 505
Query: 210 AKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMD 269
A+ EM E G P+ TY + I G ++ A + ++EM++ G+ PN + L++
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565
Query: 270 GLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKP 329
CK G ++A MV + + TY L+NGL K K +A EI MR +G+ P
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Query: 330 NAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDS 389
+ YG +I+GF + Q A++ DEMV G++P +V ++N ++ G C + +
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP-------NVIIYNMLLGGFCRSGEI 678
Query: 390 PRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVV 449
+A +L M +G+ T+ +I +CK GDL +A R+ +EM G VPD ++ +
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738
Query: 450 MGG 452
+ G
Sbjct: 739 VDG 741
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 206/444 (46%), Gaps = 36/444 (8%)
Query: 43 SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILL--TICRGYGRVHR 100
++G R + + +I + ++F A +L+ MK++ + DI ++ G + R
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG--IAPDIFCYNSLIIGLSKAKR 502
Query: 101 PLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNI 160
+A +M + LK +Y I +E + A + +EMR+ G+ P+ V
Sbjct: 503 MDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG 562
Query: 161 LIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
LI CK + I+ A + M ++G D+ TY L+NGL + V +A+E+F EM K
Sbjct: 563 LINEYCKKGKVIE-ACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK 621
Query: 221 GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQA 280
G +P V +Y LI+G + N+ +A + +EM + G+ PNV Y+ L+ G C+ G +A
Sbjct: 622 GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKA 681
Query: 281 MELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISG 340
ELL+ M K PN VTY T+I+G CK G +EA + D M+L+GL P++ +Y ++ G
Sbjct: 682 KELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDG 741
Query: 341 FCAASSYQDAANFIDEMVLG---GISPSRA--TWSLHV-----------RM--------- 375
C + + A G +P A W R+
Sbjct: 742 CCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG 801
Query: 376 ------HNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAAR 429
+N ++ LC + A +L+ M+ + + T+ L+ + K G +
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861
Query: 430 ILEEMISDGCVPDKGIWDVVMGGL 453
+ +E I+ G PD ++ V++
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAF 885
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 182/401 (45%), Gaps = 67/401 (16%)
Query: 116 LKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSA 175
LK+T Y +ID L + ++ A + EM +G+ + ++LI L K + D+A
Sbjct: 276 LKYT---YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNA-DAA 331
Query: 176 LQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHG 235
+ HEM + G Y Y I + + G + +AK LF+ M G P Y SLI G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 236 MCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPN 295
C+ N+ + LL EMKK I + +TY T++ G+C G A +++ M+ RPN
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 296 MVTYGTLINGLCKEGKFSEAVEILDRMRLQ------------------------------ 325
+V Y TLI + +F +A+ +L M+ Q
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511
Query: 326 -----GLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMH---- 376
GLKPNA YG ISG+ AS + A ++ EM G+ P++ + + +
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKG 571
Query: 377 ----------NTVVQGLCSNVDS--------------PRAFQLYLSMRTRGISIEIDTFD 412
+ V QG+ + + A +++ MR +GI+ ++ ++
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG 631
Query: 413 CLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
LI F K G++ KA+ I +EM+ +G P+ I+++++GG
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGF 672
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 185/441 (41%), Gaps = 48/441 (10%)
Query: 52 TFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICR------------------ 93
+F + L F A ++ERM + N V E + +I R
Sbjct: 99 SFSFLALDLCNFGSFEKALSVVERMIERNWPVAE-VWSSIVRCSQEFVGKSDDGVLFGIL 157
Query: 94 --GYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGI 151
GY +A+ VF +L ++D L+ N + Y+ M + +
Sbjct: 158 FDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNV 217
Query: 152 PPSVVSLNILIKALCK--------------NKE------TIDSALQIFHEMPNRGCQPDS 191
V + ++LI A C+ KE +D AL++ M +G P
Sbjct: 218 VFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLK 277
Query: 192 YTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEE 251
YTY LI+GLC++ + +AK L EM+ G S TY+ LI G+ + N A L+ E
Sbjct: 278 YTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHE 337
Query: 252 MKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGK 311
M +GI + Y + + K G +A L + M+ P Y +LI G C+E
Sbjct: 338 MVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN 397
Query: 312 FSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSL 371
+ E+L M+ + + + YG ++ G C++ A N + EM+ G P
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRP------- 450
Query: 372 HVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARIL 431
+V ++ T+++ N A ++ M+ +GI+ +I ++ LI K +++A L
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 432 EEMISDGCVPDKGIWDVVMGG 452
EM+ +G P+ + + G
Sbjct: 511 VEMVENGLKPNAFTYGAFISG 531
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 165/338 (48%), Gaps = 16/338 (4%)
Query: 27 DINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTED 86
++ KA +FD E G + + +++ + + A+ LL+ M +
Sbjct: 642 NMQKASSIFDEMVEE---GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV 698
Query: 87 ILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREM 146
TI GY + +A R+F +M+ L Y T++D N V+RAI +
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN 758
Query: 147 RKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPN----RGCQPDSYTYGTLINGLC 202
+K G S N LI + K +T + ++ + + + R +P+ TY +I+ LC
Sbjct: 759 KK-GCASSTAPFNALINWVFKFGKT-ELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLC 816
Query: 203 RMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVF 262
+ G++ AKELF++M+ P+V+TYTSL++G + E + +E GIEP+
Sbjct: 817 KEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHI 876
Query: 263 TYSTLMDGLCKGGHSLQAMELLEMMVTKHN-----RPNMVTYGTLINGLCKEGKFSEAVE 317
YS +++ K G + +A+ L++ M K+ + ++ T L++G K G+ A +
Sbjct: 877 MYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEK 936
Query: 318 ILDRM-RLQGLKPNAGLYGKIISGFCAASSYQDAANFI 354
+++ M RLQ + P++ ++I+ C +S+ + A+ +
Sbjct: 937 VMENMVRLQYI-PDSATVIELINESCISSNQRVEADAV 973
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 127/314 (40%), Gaps = 55/314 (17%)
Query: 190 DSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEA---- 245
DS+++ L LC GS +A + M E+ + P ++S++ C + +G++
Sbjct: 98 DSFSFLAL--DLCNFGSFEKALSVVERMIERNW-PVAEVWSSIVR--CSQEFVGKSDDGV 152
Query: 246 ---IRLLEEMKKNGIEPNVFTYST---------------LMDGLCKGGHSLQAMELLEMM 287
I + K IE VF +S+ L+D L + ++ + M
Sbjct: 153 LFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGM 212
Query: 288 VTKHNRPNMVTYGTLINGLCKEGKFSEAVEIL---------------------DRMRLQG 326
V ++ ++ TY LI C+ G ++L + M +G
Sbjct: 213 VERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKG 272
Query: 327 LKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSN 386
L P Y +I G C +DA + + EM G+S T+SL ++ GL
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL-------LIDGLLKG 325
Query: 387 VDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIW 446
++ A L M + GI+I+ +DC I K G + KA + + MI+ G +P +
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385
Query: 447 DVVMGGLWDRKKVR 460
++ G K VR
Sbjct: 386 ASLIEGYCREKNVR 399
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 128/432 (29%), Positives = 204/432 (47%), Gaps = 37/432 (8%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERM---KQEN-----------------CVVT 84
GFR T+ V+ L F A+ L+E + K +N C
Sbjct: 113 GFRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEMRVTPMCGFL 172
Query: 85 EDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYR 144
D L+ G + DAI+ F + + ++D +++ N FY
Sbjct: 173 VDALMITYTDLGFIP---DAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYM 229
Query: 145 EMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRM 204
E+ G P +V NIL+ CK + I A ++F E+ R QP ++ TLING C++
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCK-EGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKV 288
Query: 205 GSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTY 264
G++ E L ++ME+ P V TY++LI+ +C+ + + A L +EM K G+ PN +
Sbjct: 289 GNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIF 348
Query: 265 STLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRL 324
+TL+ G + G E + M++K +P++V Y TL+NG CK G A I+D M
Sbjct: 349 TTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIR 408
Query: 325 QGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLC 384
+GL+P+ Y +I GFC + A EM GI R +S +V G+C
Sbjct: 409 RGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFS-------ALVCGMC 461
Query: 385 SN---VDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVP 441
+D+ RA + M GI + T+ ++ FCK+GD ++L+EM SDG VP
Sbjct: 462 KEGRVIDAERALR---EMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVP 518
Query: 442 DKGIWDVVMGGL 453
++V++ GL
Sbjct: 519 SVVTYNVLLNGL 530
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 168/321 (52%), Gaps = 8/321 (2%)
Query: 132 EENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDS 191
+E ++ A + E+ K + P+VVS N LI CK +D ++ H+M +PD
Sbjct: 252 KEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCK-VGNLDEGFRLKHQMEKSRTRPDV 310
Query: 192 YTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEE 251
+TY LIN LC+ + A LF+EM ++G P+ V +T+LIHG ++ + ++
Sbjct: 311 FTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQK 370
Query: 252 MKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGK 311
M G++P++ Y+TL++G CK G + A +++ M+ + RP+ +TY TLI+G C+ G
Sbjct: 371 MLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGD 430
Query: 312 FSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSL 371
A+EI M G++ + + ++ G C DA + EM+ GI P T+++
Sbjct: 431 VETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTM 490
Query: 372 HVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARIL 431
++ C D+ F+L M++ G + T++ L+ CK G + A +L
Sbjct: 491 -------MMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLL 543
Query: 432 EEMISDGCVPDKGIWDVVMGG 452
+ M++ G VPD ++ ++ G
Sbjct: 544 DAMLNIGVVPDDITYNTLLEG 564
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 175/349 (50%), Gaps = 8/349 (2%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
GF + F +++++ A+ + + + + + T T+ GY +V +
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
R+ H+ME + + +Y +I+ L +EN + A + EM K G+ P+ V LI
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
+N E ID + + +M ++G QPD Y TL+NG C+ G + A+ + + M +G P
Sbjct: 355 HSRNGE-IDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRP 413
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
+TYT+LI G C+ ++ A+ + +EM +NGIE + +S L+ G+CK G + A L
Sbjct: 414 DKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERAL 473
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAA 344
M+ +P+ VTY +++ CK+G ++L M+ G P+ Y +++G C
Sbjct: 474 REMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKL 533
Query: 345 SSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAF 393
++A +D M+ G+ P T+ NT+++G + +S + +
Sbjct: 534 GQMKNADMLLDAMLNIGVVPDDITY-------NTLLEGHHRHANSSKRY 575
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 139/295 (47%), Gaps = 21/295 (7%)
Query: 172 IDSALQIFH-------EMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
I A+Q F ++P RGC G L++ + ++ + E+ + GF
Sbjct: 186 IPDAIQCFRLSRKHRFDVPIRGC-------GNLLDRMMKLNPTGTIWGFYMEILDAGFPL 238
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
+V + L++ C+ N+ +A ++ +E+ K ++P V +++TL++G CK G+ + L
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAA 344
M RP++ TY LIN LCKE K A + D M +GL PN ++ +I G
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 345 SSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGI 404
+M+ G+ P + ++NT+V G C N D A + M RG+
Sbjct: 359 GEIDLMKESYQKMLSKGLQPD-------IVLYNTLVNGFCKNGDLVAARNIVDGMIRRGL 411
Query: 405 SIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
+ T+ LI FC+ GD+ A I +EM +G D+ + ++ G+ +V
Sbjct: 412 RPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRV 466
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 116/245 (47%), Gaps = 16/245 (6%)
Query: 33 LMFDSATAEYSNGFRHDHTTFGVMIS------RLVAANQFRSAEGLLERMKQENCVVTED 86
LM +S S G + D + +++ LVAA +G++ R + + +
Sbjct: 363 LMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNI--VDGMIRRGLRPDKITYTT 420
Query: 87 ILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREM 146
++ CRG G V A+ + +M+ ++ + + ++ + +E V A REM
Sbjct: 421 LIDGFCRG-GDVET---ALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREM 476
Query: 147 RKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGS 206
+ GI P V+ +++ A CK K + ++ EM + G P TY L+NGLC++G
Sbjct: 477 LRAGIKPDDVTYTMMMDAFCK-KGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQ 535
Query: 207 VSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYST 266
+ A L + M G P +TY +L+ G + N + R +++ + GI ++ +Y +
Sbjct: 536 MKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHAN--SSKRYIQK-PEIGIVADLASYKS 592
Query: 267 LMDGL 271
+++ L
Sbjct: 593 IVNEL 597
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 167/321 (52%), Gaps = 8/321 (2%)
Query: 139 AIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLI 198
I + +M+ +GIP ++ + NIL+ C+ + + AL +M G +P T+G+L+
Sbjct: 100 VIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQ-LSLALSFLGKMIKLGHEPSIVTFGSLL 158
Query: 199 NGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIE 258
NG CR V +A +F++M G+ P+VV Y ++I G+C+S + A+ LL M+K+GI
Sbjct: 159 NGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIG 218
Query: 259 PNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEI 318
P+V TY++L+ GLC G A ++ M + P++ T+ LI+ KEG+ SEA E
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEF 278
Query: 319 LDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNT 378
+ M + L P+ Y +I G C S +A MV G P T+S+
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSI------- 331
Query: 379 VVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDG 438
++ G C + +L+ M RG+ T+ LI+ +C+ G LN A I M+ G
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCG 391
Query: 439 CVPDKGIWDVVMGGLWDRKKV 459
P+ ++V++ GL D K+
Sbjct: 392 VHPNIITYNVLLHGLCDNGKI 412
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/402 (30%), Positives = 189/402 (47%), Gaps = 14/402 (3%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERM---KQENCVVTEDILLTICRGYGRVHRP 101
G H+ T ++++ +Q A L +M E +VT LL G+ R R
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLN---GFCRGDRV 167
Query: 102 LDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNIL 161
DA+ +F +M K Y T+ID L + V A+ M K GI P VV+ N L
Sbjct: 168 YDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSL 227
Query: 162 IKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKG 221
I LC + D A ++ M R PD +T+ LI+ + G VSEA+E + EM +
Sbjct: 228 ISGLCSSGRWSD-ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRS 286
Query: 222 FSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAM 281
P +VTY+ LI+G+C L EA + M G P+V TYS L++G CK M
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGM 346
Query: 282 ELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGF 341
+L M + N VTY LI G C+ GK + A EI RM G+ PN Y ++ G
Sbjct: 347 KLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGL 406
Query: 342 CAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRT 401
C + A + +M G+ T+ N +++G+C + A+ +Y S+
Sbjct: 407 CDNGKIEKALVILADMQKNGMDADIVTY-------NIIIRGMCKAGEVADAWDIYCSLNC 459
Query: 402 RGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDK 443
+G+ +I T+ ++ K+G +A + +M DG +P++
Sbjct: 460 QGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 169/346 (48%), Gaps = 29/346 (8%)
Query: 139 AIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLI 198
A++F +M K+G PS+V+ L+ C+ D AL +F +M G +P+ Y T+I
Sbjct: 135 ALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYD-ALYMFDQMVGMGYKPNVVIYNTII 193
Query: 199 NGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIE 258
+GLC+ V A +L N ME+ G P VVTY SLI G+C S +A R++ M K I
Sbjct: 194 DGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIY 253
Query: 259 PNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEI 318
P+VFT++ L+D K G +A E E M+ + P++VTY LI GLC + EA E+
Sbjct: 254 PDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEM 313
Query: 319 LDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVR---- 374
M +G P+ Y +I+G+C + + EM G+ + T+++ ++
Sbjct: 314 FGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCR 373
Query: 375 ------------------------MHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDT 410
+N ++ GLC N +A + M+ G+ +I T
Sbjct: 374 AGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVT 433
Query: 411 FDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDR 456
++ +I+ CK G++ A I + G +PD + +M GL+ +
Sbjct: 434 YNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKK 479
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 178/360 (49%), Gaps = 12/360 (3%)
Query: 10 PKQIT-SSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRS 68
P +T SL+ + ++ + A+ MFD G++ + + +I L + Q +
Sbjct: 149 PSIVTFGSLLNGFCRGDR-VYDALYMFDQMVGM---GYKPNVVIYNTIIDGLCKSKQVDN 204
Query: 69 AEGLLERMKQENC---VVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLT 125
A LL RM+++ VVT + L++ G R DA R+ M ++ ++
Sbjct: 205 ALDLLNRMEKDGIGPDVVTYNSLIS---GLCSSGRWSDATRMVSCMTKREIYPDVFTFNA 261
Query: 126 VIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR 185
+ID V+E V A FY EM + + P +V+ ++LI LC +D A ++F M ++
Sbjct: 262 LIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR-LDEAEEMFGFMVSK 320
Query: 186 GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEA 245
GC PD TY LING C+ V +LF EM ++G + VTYT LI G C++ L A
Sbjct: 321 GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVA 380
Query: 246 IRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING 305
+ M G+ PN+ TY+ L+ GLC G +A+ +L M ++VTY +I G
Sbjct: 381 EEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRG 440
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPS 365
+CK G+ ++A +I + QGL P+ Y ++ G ++A +M GI P+
Sbjct: 441 MCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 137/288 (47%), Gaps = 7/288 (2%)
Query: 172 IDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTS 231
+D +L +F M P + L++ + +M L+ +M+ G ++ T
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 232 LIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKH 291
L++ C+ L A+ L +M K G EP++ T+ +L++G C+G A+ + + MV
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 292 NRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAA 351
+PN+V Y T+I+GLCK + A+++L+RM G+ P+ Y +ISG C++ + DA
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 352 NFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTF 411
+ M I P T+ N ++ A + Y M R + +I T+
Sbjct: 242 RMVSCMTKREIYPDVFTF-------NALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTY 294
Query: 412 DCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
LI C L++A + M+S GC PD + +++ G KKV
Sbjct: 295 SLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKV 342
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 129/257 (50%), Gaps = 8/257 (3%)
Query: 197 LINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNG 256
L NG+ R + ++ +LF M + PS+ ++ L+ + + I L E+M+ G
Sbjct: 53 LRNGI-RFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLG 111
Query: 257 IEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAV 316
I N+ T + L++ C+ A+ L M+ + P++VT+G+L+NG C+ + +A+
Sbjct: 112 IPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDAL 171
Query: 317 EILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMH 376
+ D+M G KPN +Y II G C + +A + ++ M GI P T+
Sbjct: 172 YMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTY------- 224
Query: 377 NTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMIS 436
N+++ GLCS+ A ++ M R I ++ TF+ LI K G +++A EEMI
Sbjct: 225 NSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIR 284
Query: 437 DGCVPDKGIWDVVMGGL 453
PD + +++ GL
Sbjct: 285 RSLDPDIVTYSLLIYGL 301
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 189/350 (54%), Gaps = 8/350 (2%)
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
DAI +F M + T + + + + +A ++M GI ++ +L+I+I
Sbjct: 71 DAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMI 130
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF 222
C+ ++ + A ++ G +P++ T+ TLINGLC G VSEA EL + M E G
Sbjct: 131 NCFCRCRK-LCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 223 SPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAME 282
P ++T +L++G+C S EA+ L+++M + G +PN TY +++ +CK G + AME
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 283 LLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFC 342
LL M ++ + + V Y +I+GLCK G A + + M ++G+ N Y +I GFC
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309
Query: 343 AASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTR 402
A + D A + +M+ I+P+ T+S V + + V +G A +L+ M R
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFS--VLIDSFVKEG-----KLREAEELHKEMIHR 362
Query: 403 GISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGG 452
GI+ + T+ LI FCK L+KA ++++ M+S GC P+ +++++ G
Sbjct: 363 GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILING 412
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 204/422 (48%), Gaps = 22/422 (5%)
Query: 45 GFRHDHTTFGVMISRLVAANQF---RSAEGLLERMKQENCVVTEDILLTICRGYGRVHRP 101
G H+ T +MI+ + SA G + ++ E +T L+ GRV
Sbjct: 118 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEA 177
Query: 102 LDAIRVFHKMEDFQLKFTQKSYLTVIDILVE----ENHVKRAIAFYREMRKMGIPPSVVS 157
L+ + D ++ K L I+ LV A+ +M + G P+ V+
Sbjct: 178 LELV-------DRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVT 230
Query: 158 LNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEM 217
++ +CK+ +T A+++ +M R + D+ Y +I+GLC+ GS+ A LFNEM
Sbjct: 231 YGPVLNVMCKSGQTA-LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289
Query: 218 EEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHS 277
E KG + +++TY LI G C + + +LL +M K I PNV T+S L+D K G
Sbjct: 290 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKL 349
Query: 278 LQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKI 337
+A EL + M+ + P+ +TY +LI+G CKE +A +++D M +G PN + +
Sbjct: 350 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNIL 409
Query: 338 ISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYL 397
I+G+C A+ D +M L G+ T+ NT++QG C A +L+
Sbjct: 410 INGYCKANRIDDGLELFRKMSLRGVVADTVTY-------NTLIQGFCELGKLNVAKELFQ 462
Query: 398 SMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRK 457
M +R + I T+ L+ C G+ KA I E++ D GI+++++ G+ +
Sbjct: 463 EMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 522
Query: 458 KV 459
KV
Sbjct: 523 KV 524
Score = 181 bits (460), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 130/485 (26%), Positives = 224/485 (46%), Gaps = 54/485 (11%)
Query: 10 PKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSA 69
P IT S + + E +++A+ + D G + D T +++ L + + A
Sbjct: 156 PNTITFSTLINGLCLEGRVSEALELVDRMV---EMGHKPDLITINTLVNGLCLSGKEAEA 212
Query: 70 EGLLERMK----QENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLT 125
L+++M Q N V +L +C+ G+ ++ +R KME+ +K Y
Sbjct: 213 MLLIDKMVEYGCQPNAVTYGPVLNVMCKS-GQTALAMELLR---KMEERNIKLDAVKYSI 268
Query: 126 VIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR 185
+ID L + + A + EM GI ++++ NILI C N D ++ +M R
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC-NAGRWDDGAKLLRDMIKR 327
Query: 186 GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEA 245
P+ T+ LI+ + G + EA+EL EM +G +P +TYTSLI G C+ ++L +A
Sbjct: 328 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 387
Query: 246 IRLLEEMKKNGIEPNV-----------------------------------FTYSTLMDG 270
++++ M G +PN+ TY+TL+ G
Sbjct: 388 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 447
Query: 271 LCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPN 330
C+ G A EL + MV++ PN+VTY L++GLC G+ +A+EI +++ ++ +
Sbjct: 448 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507
Query: 331 AGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSP 390
G+Y II G C AS DA + + L G+ P V+ +N ++ GLC
Sbjct: 508 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPG-------VKTYNIMIGGLCKKGPLS 560
Query: 391 RAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVM 450
A L+ M G + + T++ LI+ GD K+ +++EE+ G D +V+
Sbjct: 561 EAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 620
Query: 451 GGLWD 455
L D
Sbjct: 621 DMLSD 625
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 146/288 (50%), Gaps = 7/288 (2%)
Query: 173 DSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSL 232
D A+ +F +M + P + L + + + L +ME KG + ++ T + +
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 233 IHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHN 292
I+ C+ L A + ++ K G EPN T+STL++GLC G +A+EL++ MV +
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 293 RPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAAN 352
+P+++T TL+NGLC GK +EA+ ++D+M G +PNA YG +++ C + A
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 353 FIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFD 412
+ +M I +S+ ++ GLC + AF L+ M +GI+ I T++
Sbjct: 250 LLRKMEERNIKLDAVKYSI-------IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYN 302
Query: 413 CLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKVR 460
LI FC G + A++L +MI P+ + V++ K+R
Sbjct: 303 ILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLR 350
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 128/266 (48%), Gaps = 6/266 (2%)
Query: 10 PKQIT-SSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRS 68
P IT +SL++ K E ++KA M D S G + TF ++I+ AN+
Sbjct: 366 PDTITYTSLIDGFCK-ENHLDKANQMVDLMV---SKGCDPNIRTFNILINGYCKANRIDD 421
Query: 69 AEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVID 128
L +M V T+ +G+ + + A +F +M ++ +Y ++D
Sbjct: 422 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLD 481
Query: 129 ILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQ 188
L + ++A+ + ++ K + + NI+I +C N +D A +F +P +G +
Sbjct: 482 GLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMC-NASKVDDAWDLFCSLPLKGVK 540
Query: 189 PDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRL 248
P TY +I GLC+ G +SEA+ LF +MEE G +P TY LI + ++++L
Sbjct: 541 PGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKL 600
Query: 249 LEEMKKNGIEPNVFTYSTLMDGLCKG 274
+EE+K+ G + T ++D L G
Sbjct: 601 IEELKRCGFSVDASTIKMVIDMLSDG 626
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 195/420 (46%), Gaps = 29/420 (6%)
Query: 65 QFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYL 124
QF A L RM + + + +++R I +F +M+ + +
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 125 TVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPN 184
V+ + + RA F +M K+G P +V+ L+ C + I+ A+ +F ++
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYC-HWNRIEDAIALFDQILG 181
Query: 185 RGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGE 244
G +P+ TY TLI LC+ ++ A ELFN+M G P+VVTY +L+ G+C+ G+
Sbjct: 182 MGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGD 241
Query: 245 AIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLIN 304
A LL +M K IEPNV T++ L+D K G ++A EL +M+ P++ TYG+LIN
Sbjct: 242 AAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLIN 301
Query: 305 GLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISP 364
GLC G EA ++ M G PN +Y +I GFC + +D EM G+
Sbjct: 302 GLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA 361
Query: 365 SRATWSL----------------------------HVRMHNTVVQGLCSNVDSPRAFQLY 396
+ T+++ +R +N ++ GLC N +A ++
Sbjct: 362 NTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIF 421
Query: 397 LSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDR 456
MR R + I I T+ +I+ CK G + A + + S G P+ + ++ G R
Sbjct: 422 EYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRR 481
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 179/357 (50%), Gaps = 8/357 (2%)
Query: 90 TICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKM 149
++ GY +R DAI +F ++ K +Y T+I L + H+ A+ + +M
Sbjct: 158 SLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTN 217
Query: 150 GIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSE 209
G P+VV+ N L+ LC+ D+A + +M R +P+ T+ LI+ ++G + E
Sbjct: 218 GSRPNVVTYNALVTGLCEIGRWGDAA-WLLRDMMKRRIEPNVITFTALIDAFVKVGKLME 276
Query: 210 AKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMD 269
AKEL+N M + P V TY SLI+G+C L EA ++ M++NG PN Y+TL+
Sbjct: 277 AKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIH 336
Query: 270 GLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKP 329
G CK M++ M K N +TY LI G C G+ A E+ ++M + P
Sbjct: 337 GFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPP 396
Query: 330 NAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDS 389
+ Y ++ G C + A + M + +++ + ++QG+C
Sbjct: 397 DIRTYNVLLDGLCCNGKVEKALMIFEYM-------RKREMDINIVTYTIIIQGMCKLGKV 449
Query: 390 PRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIW 446
AF L+ S+ ++G+ + T+ +I FC+RG +++A + ++M DG +P++ ++
Sbjct: 450 EDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 179/357 (50%), Gaps = 8/357 (2%)
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
DA+ +F +M + + + ++ ++ + N I+ + +M+ +GIPP + + NI++
Sbjct: 66 DALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVM 125
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF 222
+C + + ++ +M G +PD T+ +L+NG C + +A LF+++ GF
Sbjct: 126 HCVCLSSQPCRASC-FLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF 184
Query: 223 SPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAME 282
P+VVTYT+LI +C++ +L A+ L +M NG PNV TY+ L+ GLC+ G A
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAW 244
Query: 283 LLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFC 342
LL M+ + PN++T+ LI+ K GK EA E+ + M + P+ YG +I+G C
Sbjct: 245 LLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLC 304
Query: 343 AASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTR 402
+A M G P+ ++ T++ G C + +++ M +
Sbjct: 305 MYGLLDEARQMFYLMERNGCYPNEVIYT-------TLIHGFCKSKRVEDGMKIFYEMSQK 357
Query: 403 GISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
G+ T+ LI+ +C G + A + +M S PD ++V++ GL KV
Sbjct: 358 GVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKV 414
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 161/345 (46%), Gaps = 10/345 (2%)
Query: 28 INKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENC---VVT 84
I A+ +FD GF+ + T+ +I L A L +M VVT
Sbjct: 169 IEDAIALFDQILGM---GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVT 225
Query: 85 EDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYR 144
+ L+T G + R DA + M +++ ++ +ID V+ + A Y
Sbjct: 226 YNALVT---GLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYN 282
Query: 145 EMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRM 204
M +M + P V + LI LC +D A Q+F+ M GC P+ Y TLI+G C+
Sbjct: 283 VMIQMSVYPDVFTYGSLINGLCM-YGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKS 341
Query: 205 GSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTY 264
V + ++F EM +KG + +TYT LI G C A + +M P++ TY
Sbjct: 342 KRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTY 401
Query: 265 STLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRL 324
+ L+DGLC G +A+ + E M + N+VTY +I G+CK GK +A ++ +
Sbjct: 402 NVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFS 461
Query: 325 QGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATW 369
+G+KPN Y +ISGFC +A + +M G P+ + +
Sbjct: 462 KGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 137/288 (47%), Gaps = 7/288 (2%)
Query: 172 IDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTS 231
+ AL +F M + P + L++ + +M LF +M+ G P + T
Sbjct: 64 FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123
Query: 232 LIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKH 291
++H +C S A L +M K G EP++ T+++L++G C A+ L + ++
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 292 NRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAA 351
+PN+VTY TLI LCK + AVE+ ++M G +PN Y +++G C + DAA
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 352 NFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTF 411
+ +M+ I P+ T++ ++ A +LY M + ++ T+
Sbjct: 244 WLLRDMMKRRIEPNVITFT-------ALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTY 296
Query: 412 DCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
LI C G L++A ++ M +GC P++ I+ ++ G K+V
Sbjct: 297 GSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRV 344
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 102/246 (41%), Gaps = 43/246 (17%)
Query: 197 LINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNG 256
L NGL + ++A +LF M PS++ +T L+ + + + I L E+M+ G
Sbjct: 55 LRNGLHNL-QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILG 113
Query: 257 IEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAV 316
I P + T + +M +C C+ F
Sbjct: 114 IPPLLCTCNIVMHCVCLSSQP-----------------------------CRASCF---- 140
Query: 317 EILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMH 376
L +M G +P+ + +++G+C + +DA D+++ G P+ T++
Sbjct: 141 --LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYT------ 192
Query: 377 NTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMIS 436
T+++ LC N A +L+ M T G + T++ L+ C+ G AA +L +M+
Sbjct: 193 -TLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMK 251
Query: 437 DGCVPD 442
P+
Sbjct: 252 RRIEPN 257
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 123/488 (25%), Positives = 226/488 (46%), Gaps = 51/488 (10%)
Query: 5 TLFKWPKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAAN 64
++ +WP+ +T SL+ Q++K +K+ A+ +F+ A + + + H+ + + MI L +N
Sbjct: 2 SVVRWPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPS-YGHNGSVYATMIDILGKSN 60
Query: 65 QFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYL 124
+ + ++ERMK+++C + + ++ R + R R DAI +F + +F S+
Sbjct: 61 RVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFD 120
Query: 125 TVIDILVEENHVKRAIAFYREM-RKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMP 183
T++ +V+E+ ++ A +R+ + + +LN+L+K LC+ + D A Q+F EM
Sbjct: 121 TLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRS-DLASQVFQEMN 179
Query: 184 NRGCQPDSYTYGTLINGLCRMGSVSEAKEL----FNEMEEKGFSPSVVTYTSLIHGMCQS 239
+GC PD +Y L+ G C G + EA L F + +KG +V Y L+ +C +
Sbjct: 180 YQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDA 239
Query: 240 DNLGEAI-------------------------------------RLLEEMKKNGIEPNVF 262
+ +AI RLL E G P +
Sbjct: 240 GEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLD 299
Query: 263 TYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRM 322
+YS + L + G ++ E+L M +K P YG + LC+ GK EAV ++++
Sbjct: 300 SYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKE 359
Query: 323 RLQG-LKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQ 381
+QG P G+Y +I G C +A ++ +M + + + + T+V
Sbjct: 360 MMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKM------SKQVSCVANEETYQTLVD 413
Query: 382 GLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVP 441
GLC + A Q+ M + ++T+ +IK C +A LEEM+S VP
Sbjct: 414 GLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVP 473
Query: 442 DKGIWDVV 449
+ +W +
Sbjct: 474 ESSVWKAL 481
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 151/353 (42%), Gaps = 27/353 (7%)
Query: 7 FKWPKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQF 66
+ W + + L+K +N++ L G D ++ +++ +
Sbjct: 144 YGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKL 203
Query: 67 RSAEGLLERM--------KQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKF 118
A LL M E+ VV +L +C G V DAI + K+ LK
Sbjct: 204 EEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDA-GEVD---DAIEILGKILRKGLKA 259
Query: 119 TQKSYLTVIDILVEENH-------VKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKET 171
++ Y + E H ++R E G P + S + + L + +
Sbjct: 260 PKRCYHHI-----EAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKL 314
Query: 172 IDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFN-EMEEKGFSPSVVTYT 230
++ ++ M ++G +P + YG + LCR G + EA + N EM + P+V Y
Sbjct: 315 VEGE-EVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYN 373
Query: 231 SLIHGMCQSDNLGEAIRLLEEMKKN-GIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVT 289
LI G+C EA+ L++M K N TY TL+DGLC+ G L+A +++E M+
Sbjct: 374 VLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLI 433
Query: 290 KHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFC 342
K + P + TY +I GLC + EAV L+ M Q + P + ++ + C
Sbjct: 434 KSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 3/168 (1%)
Query: 123 YLTVIDILVEENHVKRAIAFY-REMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHE 181
Y + L +K A++ +EM + P+V N+LIK LC + +++++ +
Sbjct: 336 YGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKM 395
Query: 182 MPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDN 241
C + TY TL++GLCR G EA ++ EM K P V TY +I G+C D
Sbjct: 396 SKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDR 455
Query: 242 LGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVT 289
EA+ LEEM + P + L + +C ++ +E+LE +++
Sbjct: 456 RYEAVMWLEEMVSQDMVPESSVWKALAESVCFC--AIDVVEILEHLIS 501
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 123/488 (25%), Positives = 226/488 (46%), Gaps = 51/488 (10%)
Query: 5 TLFKWPKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAAN 64
++ +WP+ +T SL+ Q++K +K+ A+ +F+ A + + + H+ + + MI L +N
Sbjct: 2 SVVRWPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPS-YGHNGSVYATMIDILGKSN 60
Query: 65 QFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYL 124
+ + ++ERMK+++C + + ++ R + R R DAI +F + +F S+
Sbjct: 61 RVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFD 120
Query: 125 TVIDILVEENHVKRAIAFYREM-RKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMP 183
T++ +V+E+ ++ A +R+ + + +LN+L+K LC+ + D A Q+F EM
Sbjct: 121 TLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRS-DLASQVFQEMN 179
Query: 184 NRGCQPDSYTYGTLINGLCRMGSVSEAKEL----FNEMEEKGFSPSVVTYTSLIHGMCQS 239
+GC PD +Y L+ G C G + EA L F + +KG +V Y L+ +C +
Sbjct: 180 YQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDA 239
Query: 240 DNLGEAI-------------------------------------RLLEEMKKNGIEPNVF 262
+ +AI RLL E G P +
Sbjct: 240 GEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLD 299
Query: 263 TYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRM 322
+YS + L + G ++ E+L M +K P YG + LC+ GK EAV ++++
Sbjct: 300 SYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKE 359
Query: 323 RLQG-LKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQ 381
+QG P G+Y +I G C +A ++ +M + + + + T+V
Sbjct: 360 MMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKM------SKQVSCVANEETYQTLVD 413
Query: 382 GLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVP 441
GLC + A Q+ M + ++T+ +IK C +A LEEM+S VP
Sbjct: 414 GLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVP 473
Query: 442 DKGIWDVV 449
+ +W +
Sbjct: 474 ESSVWKAL 481
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 151/353 (42%), Gaps = 27/353 (7%)
Query: 7 FKWPKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQF 66
+ W + + L+K +N++ L G D ++ +++ +
Sbjct: 144 YGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKL 203
Query: 67 RSAEGLLERM--------KQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKF 118
A LL M E+ VV +L +C G V DAI + K+ LK
Sbjct: 204 EEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDA-GEVD---DAIEILGKILRKGLKA 259
Query: 119 TQKSYLTVIDILVEENH-------VKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKET 171
++ Y + E H ++R E G P + S + + L + +
Sbjct: 260 PKRCYHHI-----EAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKL 314
Query: 172 IDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFN-EMEEKGFSPSVVTYT 230
++ ++ M ++G +P + YG + LCR G + EA + N EM + P+V Y
Sbjct: 315 VEGE-EVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYN 373
Query: 231 SLIHGMCQSDNLGEAIRLLEEMKKN-GIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVT 289
LI G+C EA+ L++M K N TY TL+DGLC+ G L+A +++E M+
Sbjct: 374 VLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLI 433
Query: 290 KHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFC 342
K + P + TY +I GLC + EAV L+ M Q + P + ++ + C
Sbjct: 434 KSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 3/168 (1%)
Query: 123 YLTVIDILVEENHVKRAIAFY-REMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHE 181
Y + L +K A++ +EM + P+V N+LIK LC + +++++ +
Sbjct: 336 YGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKM 395
Query: 182 MPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDN 241
C + TY TL++GLCR G EA ++ EM K P V TY +I G+C D
Sbjct: 396 SKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDR 455
Query: 242 LGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVT 289
EA+ LEEM + P + L + +C ++ +E+LE +++
Sbjct: 456 RYEAVMWLEEMVSQDMVPESSVWKALAESVCFC--AIDVVEILEHLIS 501
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 213/443 (48%), Gaps = 16/443 (3%)
Query: 16 SLVE--QLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMIS---RLVAANQFRSAE 70
S++E +L+ A +NK L+ G H+ T+ ++I+ R + +
Sbjct: 77 SIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALL 136
Query: 71 GLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDIL 130
G + ++ E +VT + LL G+ +R DA+ + +M + K ++ T+I L
Sbjct: 137 GKMMKLGYEPDIVTLNSLLN---GFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGL 193
Query: 131 VEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPD 190
N A+A M + G P +V+ ++ LCK +T D AL + ++M + +
Sbjct: 194 FLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDT-DLALNLLNKMEAAKIEAN 252
Query: 191 SYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLE 250
Y T+I+ LC+ +A LF EME KG P+V+TY+SLI +C +A RLL
Sbjct: 253 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLS 312
Query: 251 EMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEG 310
+M + I PN+ T+S L+D K G ++A +L E M+ + PN+ TY +LING C
Sbjct: 313 DMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLD 372
Query: 311 KFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWS 370
+ EA ++L+ M + PN Y +I+GFC A EM G+ + T++
Sbjct: 373 RLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYT 432
Query: 371 LHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARI 430
T++ G D A ++ M + G+ I T++ L+ CK G L KA +
Sbjct: 433 -------TLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 485
Query: 431 LEEMISDGCVPDKGIWDVVMGGL 453
E + PD +++++ G+
Sbjct: 486 FEYLQRSTMEPDIYTYNIMIEGM 508
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 166/327 (50%), Gaps = 10/327 (3%)
Query: 134 NHVKRAIAFYREMRKMGIPPSVVSLNILIKAL-CKNKETIDSALQIFHEMPNRGCQPDSY 192
N + A+A +M +MG P V+ LI L NK + A+ + M RGCQPD
Sbjct: 162 NRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKAS--EAVALIDRMVQRGCQPDLV 219
Query: 193 TYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEM 252
TYG ++NGLC+ G A L N+ME +VV Y+++I +C+ + +A+ L EM
Sbjct: 220 TYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 279
Query: 253 KKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKF 312
+ G+ PNV TYS+L+ LC G A LL M+ + PN+VT+ LI+ K+GK
Sbjct: 280 ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKL 339
Query: 313 SEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLH 372
+A ++ + M + + PN Y +I+GFC +A ++ M+ P+ T+
Sbjct: 340 VKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTY--- 396
Query: 373 VRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILE 432
NT++ G C + +L+ M RG+ T+ LI F + D + A + +
Sbjct: 397 ----NTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 452
Query: 433 EMISDGCVPDKGIWDVVMGGLWDRKKV 459
+M+S G P+ +++++ GL K+
Sbjct: 453 QMVSVGVHPNILTYNILLDGLCKNGKL 479
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 178/357 (49%), Gaps = 8/357 (2%)
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
DAI +F M + + + ++ + + N I+F +M +GI ++ + NILI
Sbjct: 61 DAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILI 120
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF 222
C+ + + +M G +PD T +L+NG C +S+A L ++M E G+
Sbjct: 121 NCFCRCSRLSLALALL-GKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY 179
Query: 223 SPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAME 282
P VT+T+LIHG+ + EA+ L++ M + G +P++ TY +++GLCK G + A+
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALN 239
Query: 283 LLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFC 342
LL M N+V Y T+I+ LCK +A+ + M +G++PN Y +IS C
Sbjct: 240 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 299
Query: 343 AASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTR 402
+ DA+ + +M+ I+P+ T+S ++ +A +LY M R
Sbjct: 300 NYGRWSDASRLLSDMIERKINPNLVTFS-------ALIDAFVKKGKLVKAEKLYEEMIKR 352
Query: 403 GISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
I I T+ LI FC L +A ++LE MI C+P+ ++ ++ G K+V
Sbjct: 353 SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRV 409
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 159/338 (47%), Gaps = 34/338 (10%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
G++ D TF +I L N+ A L++RM Q C + G + A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
+ + +KME +++ Y TVID L + H A+ + EM G+ P+V++ + LI
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 165 LCK----------------------------------NKETIDSALQIFHEMPNRGCQPD 190
LC K + A +++ EM R P+
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357
Query: 191 SYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLE 250
+TY +LING C + + EAK++ M K P+VVTY +LI+G C++ + + + L
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFR 417
Query: 251 EMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEG 310
EM + G+ N TY+TL+ G + A + + MV+ PN++TY L++GLCK G
Sbjct: 418 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 477
Query: 311 KFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQ 348
K ++A+ + + ++ ++P+ Y +I G C A ++
Sbjct: 478 KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 141/288 (48%), Gaps = 7/288 (2%)
Query: 172 IDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTS 231
+D A+ +F M P + L++ + +M +ME G S ++ TY
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 232 LIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKH 291
LI+ C+ L A+ LL +M K G EP++ T ++L++G C G A+ L++ MV
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 292 NRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAA 351
+P+ VT+ TLI+GL K SEAV ++DRM +G +P+ YG +++G C A
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 352 NFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTF 411
N +++M A +V +++TV+ LC A L+ M +G+ + T+
Sbjct: 239 NLLNKM-------EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 291
Query: 412 DCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
LI C C G + A+R+L +MI P+ + ++ + K+
Sbjct: 292 SSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKL 339
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 202/436 (46%), Gaps = 29/436 (6%)
Query: 46 FRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAI 105
+ D T+ ++ L +F +++ M +E + ++ G + + +A+
Sbjct: 293 LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEAL 352
Query: 106 RVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKAL 165
+ ++ DF + Y +ID L + A + M K+G+ P+ V+ +ILI
Sbjct: 353 NLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMF 412
Query: 166 CKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPS 225
C+ + +D+AL EM + G + Y Y +LING C+ G +S A+ EM K P+
Sbjct: 413 CR-RGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT 471
Query: 226 VVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLE 285
VVTYTSL+ G C + +A+RL EM GI P+++T++TL+ GL + G A++L
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFN 531
Query: 286 MMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAAS 345
M + +PN VTY +I G C+EG S+A E L M +G+ P+ Y +I G C
Sbjct: 532 EMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTG 591
Query: 346 SYQDAANFIDEMVLGGISPSRATWS----------------------------LHVRMHN 377
+A F+D + G + ++ L + +
Sbjct: 592 QASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYG 651
Query: 378 TVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISD 437
++ G + D F L M RG+ + + +I K GD +A I + MI++
Sbjct: 652 VLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE 711
Query: 438 GCVPDKGIWDVVMGGL 453
GCVP++ + V+ GL
Sbjct: 712 GCVPNEVTYTAVINGL 727
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/448 (25%), Positives = 202/448 (45%), Gaps = 84/448 (18%)
Query: 68 SAEGLLERM---KQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYL 124
+AEG + M K E VVT L+ G++++ A+R++H+M + + ++
Sbjct: 455 AAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK---ALRLYHEMTGKGIAPSIYTFT 511
Query: 125 TVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPN 184
T++ L ++ A+ + EM + + P+ V+ N++I+ C+ + + A + EM
Sbjct: 512 TLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGD-MSKAFEFLKEMTE 570
Query: 185 RGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGE 244
+G PD+Y+Y LI+GLC G SEAK + + + + + YT L+HG C+ L E
Sbjct: 571 KGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEE 630
Query: 245 AIR-----------------------------------LLEEMKKNGIEPNVFTYSTLMD 269
A+ LL+EM G++P+ Y++++D
Sbjct: 631 ALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMID 690
Query: 270 GLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMR------ 323
K G +A + ++M+ + PN VTY +INGLCK G +EA + +M+
Sbjct: 691 AKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVP 750
Query: 324 -----------------------------LQGLKPNAGLYGKIISGFCAASSYQDAANFI 354
L+GL N Y +I GFC ++A+ I
Sbjct: 751 NQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELI 810
Query: 355 DEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCL 414
M+ G+SP T++ T++ LC D +A +L+ SM +GI + ++ L
Sbjct: 811 TRMIGDGVSPDCITYT-------TMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTL 863
Query: 415 IKCFCKRGDLNKAARILEEMISDGCVPD 442
I C G++ KA + EM+ G +P+
Sbjct: 864 IHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/486 (24%), Positives = 215/486 (44%), Gaps = 53/486 (10%)
Query: 13 ITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGL 72
+ ++L++ L K K ++A L+FD G R + T+ ++I + +A
Sbjct: 369 VYNALIDSLCKGRK-FHEAELLFDRMG---KIGLRPNDVTYSILIDMFCRRGKLDTALSF 424
Query: 73 LERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVE 132
L M ++ ++ G+ + A +M + +L+ T +Y +++
Sbjct: 425 LGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCS 484
Query: 133 ENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSY 192
+ + +A+ Y EM GI PS+ + L+ L + I A+++F+EM +P+
Sbjct: 485 KGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFR-AGLIRDAVKLFNEMAEWNVKPNRV 543
Query: 193 TYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEM 252
TY +I G C G +S+A E EM EKG P +Y LIHG+C + EA ++ +
Sbjct: 544 TYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGL 603
Query: 253 KKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKF 312
K E N Y+ L+ G C+ G +A+ + + MV + ++V YG LI+G K
Sbjct: 604 HKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDR 663
Query: 313 SEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLH 372
+L M +GLKP+ +Y +I +++A D M+ G P+ T++
Sbjct: 664 KLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYT-- 721
Query: 373 VRMHNTVVQGLC------------------SNVDSPRAFQLYLSMRTRGISIEID----- 409
V+ GLC S+V + + +L + T+G E+D
Sbjct: 722 -----AVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKG---EVDMQKAV 773
Query: 410 ---------------TFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLW 454
T++ LI+ FC++G + +A+ ++ MI DG PD + ++ L
Sbjct: 774 ELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELC 833
Query: 455 DRKKVR 460
R V+
Sbjct: 834 RRNDVK 839
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 195/452 (43%), Gaps = 62/452 (13%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
GF H +F ++I LV AN F A LL+ + +P D
Sbjct: 99 GFDHSTASFCILIHALVKANLFWPASSLLQTLLLR------------------ALKPSDV 140
Query: 105 IRV-FHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIK 163
V F E +L + L + + + + F + K+ + P V +L+ L+
Sbjct: 141 FNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLH 200
Query: 164 ALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFS 223
L K + A+++F++M + G +PD Y Y +I LC + +S AKE+ ME G
Sbjct: 201 GLVKFRH-FGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCD 259
Query: 224 PSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLC----------- 272
++V Y LI G+C+ + EA+ + +++ ++P+V TY TL+ GLC
Sbjct: 260 VNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEM 319
Query: 273 ------------------------KGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCK 308
K G +A+ L++ +V PN+ Y LI+ LCK
Sbjct: 320 MDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCK 379
Query: 309 EGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRAT 368
KF EA + DRM GL+PN Y +I FC A +F+ EMV G+
Sbjct: 380 GRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL------ 433
Query: 369 WSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAA 428
L V +N+++ G C D A M + + + T+ L+ +C +G +NKA
Sbjct: 434 -KLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKAL 492
Query: 429 RILEEMISDGCVPDKGIWDVVMGGLWDRKKVR 460
R+ EM G P + ++ GL+ +R
Sbjct: 493 RLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIR 524
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 171/360 (47%), Gaps = 6/360 (1%)
Query: 10 PKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSA 69
P ++T +++ + E D++KA T + G D ++ +I L Q A
Sbjct: 540 PNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK---GIVPDTYSYRPLIHGLCLTGQASEA 596
Query: 70 EGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDI 129
+ ++ + + NC + E + G+ R + +A+ V +M + Y +ID
Sbjct: 597 KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG 656
Query: 130 LVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQP 189
++ K +EM G+ P V +I A K + A I+ M N GC P
Sbjct: 657 SLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGD-FKEAFGIWDLMINEGCVP 715
Query: 190 DSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSD-NLGEAIRL 248
+ TY +INGLC+ G V+EA+ L ++M+ P+ VTY + + + + ++ +A+ L
Sbjct: 716 NEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVEL 775
Query: 249 LEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCK 308
+ K G+ N TY+ L+ G C+ G +A EL+ M+ P+ +TY T+IN LC+
Sbjct: 776 HNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCR 834
Query: 309 EGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRAT 368
+A+E+ + M +G++P+ Y +I G C A A +EM+ G+ P+ T
Sbjct: 835 RNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 168/377 (44%), Gaps = 11/377 (2%)
Query: 28 INKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDI 87
I AV +F+ AE++ + + T+ VMI A L+ M ++ V
Sbjct: 523 IRDAVKLFNE-MAEWN--VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYS 579
Query: 88 LLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMR 147
+ G + +A + + + Y ++ E ++ A++ +EM
Sbjct: 580 YRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMV 639
Query: 148 KMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSV 207
+ G+ +V +LI K+K+ + EM +RG +PD Y ++I+ + G
Sbjct: 640 QRGVDLDLVCYGVLIDGSLKHKDR-KLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDF 698
Query: 208 SEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTL 267
EA +++ M +G P+ VTYT++I+G+C++ + EA L +M+ PN TY
Sbjct: 699 KEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCF 758
Query: 268 MDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGL 327
+D L KG +Q L + K N TY LI G C++G+ EA E++ RM G+
Sbjct: 759 LDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGV 818
Query: 328 KPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNV 387
P+ Y +I+ C + + A + M GI P R + NT++ G C
Sbjct: 819 SPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAY-------NTLIHGCCVAG 871
Query: 388 DSPRAFQLYLSMRTRGI 404
+ +A +L M +G+
Sbjct: 872 EMGKATELRNEMLRQGL 888
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 111/269 (41%), Gaps = 36/269 (13%)
Query: 33 LMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTIC 92
L F + G + D + MI F+ A G+ + M E CV E
Sbjct: 665 LFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE------- 717
Query: 93 RGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIP 152
+Y VI+ L + V A +M+ +
Sbjct: 718 ----------------------------VTYTAVINGLCKAGFVNEAEVLCSKMQPVSSV 749
Query: 153 PSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKE 212
P+ V+ + L K + + A+++ H +G ++ TY LI G CR G + EA E
Sbjct: 750 PNQVTYGCFLDILTKGEVDMQKAVEL-HNAILKGLLANTATYNMLIRGFCRQGRIEEASE 808
Query: 213 LFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLC 272
L M G SP +TYT++I+ +C+ +++ +AI L M + GI P+ Y+TL+ G C
Sbjct: 809 LITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCC 868
Query: 273 KGGHSLQAMELLEMMVTKHNRPNMVTYGT 301
G +A EL M+ + PN T T
Sbjct: 869 VAGEMGKATELRNEMLRQGLIPNNKTSRT 897
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 184 bits (468), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 212/449 (47%), Gaps = 16/449 (3%)
Query: 16 SLVE--QLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLL 73
S+VE +L+ A +NK L+ + G HD T+ + I+ +Q A +L
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 74 ERMKQ---ENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDIL 130
+M + E +VT L ++ GY R DA+ + +M + K ++ T+I L
Sbjct: 142 AKMMKLGYEPDIVT---LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL 198
Query: 131 VEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPD 190
N A+A +M + G P +V+ ++ LCK + ID AL + ++M + +
Sbjct: 199 FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD-IDLALNLLNKMEAARIKAN 257
Query: 191 SYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLE 250
+ T+I+ LC+ V A +LF EME KG P+VVTY SLI+ +C +A RLL
Sbjct: 258 VVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLS 317
Query: 251 EMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEG 310
M + I PNV T++ L+D K G ++A +L E M+ + P+ +TY LING C
Sbjct: 318 NMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHN 377
Query: 311 KFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWS 370
+ EA ++ M + PN Y +I+GFC +D EM G+ + T++
Sbjct: 378 RLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYT 437
Query: 371 LHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARI 430
T++QG D A ++ M + + +I T+ L+ C G L+ A I
Sbjct: 438 -------TIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVI 490
Query: 431 LEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
+ + + I++ ++ G+ KV
Sbjct: 491 FKYLQKSEMELNIFIYNTMIEGMCKAGKV 519
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 128/464 (27%), Positives = 205/464 (44%), Gaps = 47/464 (10%)
Query: 26 KDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTE 85
K I+ AV + D G++ D TF +I L N+ A L+++M Q C
Sbjct: 167 KRISDAVALVDQMVEM---GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDL 223
Query: 86 DILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYRE 145
T+ G + A+ + +KME ++K + T+ID L + HV+ A+ + E
Sbjct: 224 VTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTE 283
Query: 146 MRKMGIPPSVVSLNILIKALCK---------------------NKETIDSALQIF----- 179
M GI P+VV+ N LI LC N T ++ + F
Sbjct: 284 METKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGK 343
Query: 180 --------HEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTS 231
EM R PD+ TY LING C + EAK++F M K P++ TY +
Sbjct: 344 LVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNT 403
Query: 232 LIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKH 291
LI+G C+ + + + L EM + G+ N TY+T++ G + G A + + MV+
Sbjct: 404 LINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR 463
Query: 292 NRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAA 351
+++TY L++GLC GK A+ I ++ ++ N +Y +I G C A +A
Sbjct: 464 VPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAW 523
Query: 352 NFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTF 411
+ + I P T+ NT++ GLCS A L+ M+ G T+
Sbjct: 524 DLFCSL---SIKPDVVTY-------NTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTY 573
Query: 412 DCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWD 455
+ LI+ + D +A +++EM S G V D +V L D
Sbjct: 574 NTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHD 617
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/318 (30%), Positives = 170/318 (53%), Gaps = 8/318 (2%)
Query: 136 VKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYG 195
V A+ + +M K PS+V N L+ A+ K + + + + +M G D YTY
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNK-FELVISLGEQMQTLGISHDLYTYS 122
Query: 196 TLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKN 255
IN CR +S A + +M + G+ P +VT +SL++G C S + +A+ L+++M +
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 256 GIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEA 315
G +P+ FT++TL+ GL + +A+ L++ MV + +P++VTYGT++NGLCK G A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 316 VEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRM 375
+ +L++M +K N ++ II C + A + EM GI P+ T+
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY------ 296
Query: 376 HNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMI 435
N+++ LC+ A +L +M + I+ + TF+ LI F K G L +A ++ EEMI
Sbjct: 297 -NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMI 355
Query: 436 SDGCVPDKGIWDVVMGGL 453
PD +++++ G
Sbjct: 356 QRSIDPDTITYNLLINGF 373
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 141/288 (48%), Gaps = 7/288 (2%)
Query: 172 IDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTS 231
+D A+ +F +M P + L++ + +M L +M+ G S + TY+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 232 LIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKH 291
I+ C+ L A+ +L +M K G EP++ T S+L++G C A+ L++ MV
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 292 NRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAA 351
+P+ T+ TLI+GL K SEAV ++D+M +G +P+ YG +++G C A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 352 NFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTF 411
N +++M I +V + NT++ LC A L+ M T+GI + T+
Sbjct: 244 NLLNKMEAARIKA-------NVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296
Query: 412 DCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
+ LI C C G + A+R+L M+ P+ ++ ++ + K+
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKL 344
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 110/258 (42%), Gaps = 33/258 (12%)
Query: 49 DHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVF 108
D T+ ++I+ N+ A+ + + M ++C+ T+ G+ + R D + +F
Sbjct: 362 DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELF 421
Query: 109 HKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKN 168
+M L +Y T+I + A +++M +P +++ +IL+ LC
Sbjct: 422 REMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSY 481
Query: 169 KETIDSALQIFHEMPNR--------------------------------GCQPDSYTYGT 196
+ +D+AL IF + +PD TY T
Sbjct: 482 GK-LDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNT 540
Query: 197 LINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNG 256
+I+GLC + EA +LF +M+E G P+ TY +LI + + + L++EM+ +G
Sbjct: 541 MISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSG 600
Query: 257 IEPNVFTYSTLMDGLCKG 274
+ T S + + L G
Sbjct: 601 FVGDASTISLVTNMLHDG 618
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 180/351 (51%), Gaps = 8/351 (2%)
Query: 104 AIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIK 163
A+ + +M L SY TVI E +++A+ EM+ G S+V+ ILI
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILID 220
Query: 164 ALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFS 223
A CK + +D A+ EM G + D Y +LI G C G + K LF+E+ E+G S
Sbjct: 221 AFCKAGK-MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDS 279
Query: 224 PSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMEL 283
P +TY +LI G C+ L EA + E M + G+ PNV+TY+ L+DGLC G + +A++L
Sbjct: 280 PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQL 339
Query: 284 LEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCA 343
L +M+ K PN VTY +IN LCK+G ++AVEI++ M+ + +P+ Y ++ G CA
Sbjct: 340 LNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCA 399
Query: 344 ASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLY-LSMRTR 402
+A+ + M+ + V +N ++ GLC +A +Y L +
Sbjct: 400 KGDLDEASKLLYLML-----KDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKL 454
Query: 403 GISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
G + T + L+ K GD+NKA + +++ V + + ++ G
Sbjct: 455 GAGDRVTT-NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGF 504
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 168/329 (51%), Gaps = 29/329 (8%)
Query: 143 YREMRKMGIPPSVVSL-------------NILIKALCKNKETIDSALQIFHEMPNRGCQP 189
Y +MRK G V++L NIL+K LC+N E A+ + EM P
Sbjct: 117 YVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLEC-GKAVSLLREMRRNSLMP 175
Query: 190 DSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLL 249
D ++Y T+I G C + +A EL NEM+ G S S+VT+ LI C++ + EA+ L
Sbjct: 176 DVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFL 235
Query: 250 EEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKE 309
+EMK G+E ++ Y++L+ G C G + L + ++ + + P +TY TLI G CK
Sbjct: 236 KEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKL 295
Query: 310 GKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATW 369
G+ EA EI + M +G++PN Y +I G C ++A ++ M+ P+ T+
Sbjct: 296 GQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTY 355
Query: 370 SLHVRMHNTVVQGLCSN---VDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNK 426
N ++ LC + D+ +L RTR +I T++ L+ C +GDL++
Sbjct: 356 -------NIIINKLCKDGLVADAVEIVELMKKRRTRPDNI---TYNILLGGLCAKGDLDE 405
Query: 427 AARILEEMISDGCVPDKGI--WDVVMGGL 453
A+++L M+ D D + ++ ++ GL
Sbjct: 406 ASKLLYLMLKDSSYTDPDVISYNALIHGL 434
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 163/353 (46%), Gaps = 13/353 (3%)
Query: 103 DAIRVFHKMEDF--QLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNI 160
+A+ VF + D L F + + LV + + A +FYR+M + + VSL+
Sbjct: 56 NAVSVFQQAVDSGSSLAFAGNNLMAK---LVRSRNHELAFSFYRKMLETDTFINFVSLSG 112
Query: 161 LIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
L++ + ++T A + M RG + Y + L+ GLCR +A L EM
Sbjct: 113 LLECYVQMRKT-GFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRN 171
Query: 221 GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQA 280
P V +Y ++I G C+ L +A+ L EMK +G ++ T+ L+D CK G +A
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 281 MELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISG 340
M L+ M ++V Y +LI G C G+ + D + +G P A Y +I G
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG 291
Query: 341 FCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMR 400
FC ++A+ + M+ G+ P+ T++ ++ GLC + A QL M
Sbjct: 292 FCKLGQLKEASEIFEFMIERGVRPNVYTYT-------GLIDGLCGVGKTKEALQLLNLMI 344
Query: 401 TRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
+ T++ +I CK G + A I+E M PD +++++GGL
Sbjct: 345 EKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 154/320 (48%), Gaps = 11/320 (3%)
Query: 135 HVKRAIAFYREMRKMGIPPSVVSLNILIKAL-CKNKETIDSALQIFHEMPNRGCQPDSYT 193
+K A++ +++ G + N++ K + +N E A + +M + +
Sbjct: 53 QLKNAVSVFQQAVDSGSSLAFAGNNLMAKLVRSRNHEL---AFSFYRKMLETDTFINFVS 109
Query: 194 YGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMK 253
L+ +M A + M ++GF+ +V + L+ G+C++ G+A+ LL EM+
Sbjct: 110 LSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMR 169
Query: 254 KNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFS 313
+N + P+VF+Y+T++ G C+G +A+EL M ++VT+G LI+ CK GK
Sbjct: 170 RNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMD 229
Query: 314 EAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHV 373
EA+ L M+ GL+ + +Y +I GFC DE++ G SP T+
Sbjct: 230 EAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY---- 285
Query: 374 RMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEE 433
NT+++G C A +++ M RG+ + T+ LI C G +A ++L
Sbjct: 286 ---NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNL 342
Query: 434 MISDGCVPDKGIWDVVMGGL 453
MI P+ +++++ L
Sbjct: 343 MIEKDEEPNAVTYNIIINKL 362
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 191/446 (42%), Gaps = 51/446 (11%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQEN---CVVTEDILLTICRGYGRVHRP 101
G D + +I + + L + + + C +T + T+ RG+ ++ +
Sbjct: 242 GLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYN---TLIRGFCKLGQL 298
Query: 102 LDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNIL 161
+A +F M + ++ +Y +ID L K A+ M + P+ V+ NI+
Sbjct: 299 KEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNII 358
Query: 162 IKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEM--EE 219
I LCK+ D A++I M R +PD+ TY L+ GLC G + EA +L M +
Sbjct: 359 INKLCKDGLVAD-AVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDS 417
Query: 220 KGFSPSVVTYTSLIHGMCQSDNLGEAI--------------------------------- 246
P V++Y +LIHG+C+ + L +A+
Sbjct: 418 SYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNK 477
Query: 247 --RLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLIN 304
L +++ + I N TY+ ++DG CK G A LL M +P++ Y L++
Sbjct: 478 AMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLS 537
Query: 305 GLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISP 364
LCKEG +A + + M+ P+ + +I G A + A + + M G+SP
Sbjct: 538 SLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSP 597
Query: 365 SRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDL 424
T+S ++ N ++ +D +F + M G + D ++K +G+
Sbjct: 598 DLFTYS---KLINRFLK--LGYLDEAISF--FDKMVDSGFEPDAHICDSVLKYCISQGET 650
Query: 425 NKAARILEEMISDGCVPDKGIWDVVM 450
+K ++++++ V DK + VM
Sbjct: 651 DKLTELVKKLVDKDIVLDKELTCTVM 676
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 142/310 (45%), Gaps = 9/310 (2%)
Query: 47 RHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYG-----RVHRP 101
R D+ T+ +++ L A A LL M +++ D++ +G R+H+
Sbjct: 384 RPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQA 443
Query: 102 LDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNIL 161
LD + + + T +++ ++ V +A+ ++++ I + + +
Sbjct: 444 LDIYDLLVEKLGAGDRVTTN---ILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAM 500
Query: 162 IKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKG 221
I CK ++ A + +M QP + Y L++ LC+ GS+ +A LF EM+
Sbjct: 501 IDGFCKTG-MLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDN 559
Query: 222 FSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAM 281
P VV++ +I G ++ ++ A LL M + G+ P++FTYS L++ K G+ +A+
Sbjct: 560 NFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAI 619
Query: 282 ELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGF 341
+ MV P+ +++ +G+ + E++ ++ + + + L ++
Sbjct: 620 SFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYM 679
Query: 342 CAASSYQDAA 351
C +S+ D A
Sbjct: 680 CNSSANMDLA 689
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 125/283 (44%), Gaps = 12/283 (4%)
Query: 15 SSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLE 74
++L+ L K E +++A+ ++D + G D T ++++ + A A L +
Sbjct: 428 NALIHGLCK-ENRLHQALDIYDLLVEKLGAG---DRVTTNILLNSTLKAGDVNKAMELWK 483
Query: 75 RMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEEN 134
++ V D + G+ + A + KM +L+ + Y ++ L +E
Sbjct: 484 QISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEG 543
Query: 135 HVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTY 194
+ +A + EM++ P VVS NI+I K + I SA + M G PD +TY
Sbjct: 544 SLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD-IKSAESLLVGMSRAGLSPDLFTY 602
Query: 195 GTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKK 254
LIN ++G + EA F++M + GF P S++ C S GE +L E +KK
Sbjct: 603 SKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK-YCISQ--GETDKLTELVKK 659
Query: 255 ---NGIEPNVFTYSTLMDGLCKGGHSLQ-AMELLEMMVTKHNR 293
I + T+MD +C ++ A LL + K R
Sbjct: 660 LVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRVTDDKEER 702
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 10/225 (4%)
Query: 233 IHGMCQSDN--LGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTK 290
+ +C+ N L A+ + ++ +G F + LM L + + A M+
Sbjct: 43 LRSLCEDSNPQLKNAVSVFQQAVDSG-SSLAFAGNNLMAKLVRSRNHELAFSFYRKMLET 101
Query: 291 HNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDA 350
N V+ L+ + K A +L M +G N + ++ G C A
Sbjct: 102 DTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKA 161
Query: 351 ANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDT 410
+ + EM + P V +NTV++G C + +A +L M+ G S + T
Sbjct: 162 VSLLREMRRNSLMPD-------VFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVT 214
Query: 411 FDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWD 455
+ LI FCK G +++A L+EM G D ++ ++ G D
Sbjct: 215 WGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCD 259
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 180/351 (51%), Gaps = 29/351 (8%)
Query: 125 TVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPN 184
++++ + N + A++ M G P+VV N +I LCKN++ +++AL++F+ M
Sbjct: 154 SLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD-LNNALEVFYCMEK 212
Query: 185 RGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGE 244
+G + D+ TY TLI+GL G ++A L +M ++ P+V+ +T+LI + NL E
Sbjct: 213 KGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLE 272
Query: 245 AIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLIN 304
A L +EM + + PNVFTY++L++G C G A + ++MV+K P++VTY TLI
Sbjct: 273 ARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLIT 332
Query: 305 GLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISP 364
G CK + + +++ M QGL +A Y +I G+C A A + MV G+SP
Sbjct: 333 GFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSP 392
Query: 365 SRATWSL----------------------------HVRMHNTVVQGLCSNVDSPRAFQLY 396
T+++ + +N ++QGLC A+ L+
Sbjct: 393 DIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLF 452
Query: 397 LSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWD 447
S+ +G+ + + +I C++G +A ++ M DG +P + I+D
Sbjct: 453 RSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 503
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 178/357 (49%), Gaps = 8/357 (2%)
Query: 104 AIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIK 163
I ++HKME+ + S+ +I + + A+A +M K+G PS+V+L L+
Sbjct: 98 VIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLN 157
Query: 164 ALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFS 223
C+ A+ + M G P+ Y T+INGLC+ ++ A E+F ME+KG
Sbjct: 158 GFCQGNR-FQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIR 216
Query: 224 PSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMEL 283
VTY +LI G+ S +A RLL +M K I+PNV ++ L+D K G+ L+A L
Sbjct: 217 ADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNL 276
Query: 284 LEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCA 343
+ M+ + PN+ TY +LING C G +A + D M +G P+ Y +I+GFC
Sbjct: 277 YKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCK 336
Query: 344 ASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRG 403
+ +D EM G+ T+ NT++ G C A +++ M G
Sbjct: 337 SKRVEDGMKLFCEMTYQGLVGDAFTY-------NTLIHGYCQAGKLNVAQKVFNRMVDCG 389
Query: 404 ISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKVR 460
+S +I T++ L+ C C G + KA ++E++ D +++++ GL K++
Sbjct: 390 VSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLK 446
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 182/387 (47%), Gaps = 26/387 (6%)
Query: 74 ERMKQE-NCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVE 132
ER++ E +C+ +D C RP+ +I + FT+ V+ ++ +
Sbjct: 49 ERLRNELHCIKFDDAFSLFCEMLQS--RPIPSI----------VDFTR-----VLTVIAK 91
Query: 133 ENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSY 192
N I Y +M +GI + S ILI C+ + + +M G +P
Sbjct: 92 MNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL-GKMMKLGFRPSIV 150
Query: 193 TYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEM 252
T G+L+NG C+ EA L + M+ GF P+VV Y ++I+G+C++ +L A+ + M
Sbjct: 151 TLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCM 210
Query: 253 KKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKF 312
+K GI + TY+TL+ GL G A LL MV + PN++ + LI+ KEG
Sbjct: 211 EKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNL 270
Query: 313 SEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLH 372
EA + M + + PN Y +I+GFC DA D MV G P T+
Sbjct: 271 LEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTY--- 327
Query: 373 VRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILE 432
NT++ G C + +L+ M +G+ + T++ LI +C+ G LN A ++
Sbjct: 328 ----NTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN 383
Query: 433 EMISDGCVPDKGIWDVVMGGLWDRKKV 459
M+ G PD +++++ L + K+
Sbjct: 384 RMVDCGVSPDIVTYNILLDCLCNNGKI 410
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 162/340 (47%), Gaps = 8/340 (2%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
GFR T G +++ N+F+ A L++ M V I T+ G + +A
Sbjct: 144 GFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNA 203
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
+ VF+ ME ++ +Y T+I L A R+M K I P+V+ LI
Sbjct: 204 LEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDT 263
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
K ++ A ++ EM R P+ +TY +LING C G + +AK +F+ M KG P
Sbjct: 264 FVKEGNLLE-ARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFP 322
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
VVTY +LI G C+S + + ++L EM G+ + FTY+TL+ G C+ G A ++
Sbjct: 323 DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 382
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAA 344
MV P++VTY L++ LC GK +A+ +++ ++ + + Y II G C
Sbjct: 383 NRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT 442
Query: 345 SSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLC 384
++A + G+ P + T++ GLC
Sbjct: 443 DKLKEAWCLFRSLTRKGVKPDAIAYI-------TMISGLC 475
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 107/233 (45%), Gaps = 9/233 (3%)
Query: 3 SRTLFKWPKQITSSLVEQLIKAEKDINKAVLMFDSATAEY------SNGFRHDHTTFGVM 56
+R L+K + I S+V + IN + A+Y S G D T+ +
Sbjct: 273 ARNLYK--EMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTL 330
Query: 57 ISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQL 116
I+ + + L M + V T+ GY + + A +VF++M D +
Sbjct: 331 ITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGV 390
Query: 117 KFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSAL 176
+Y ++D L +++A+ +++K + +++ NI+I+ LC+ + + A
Sbjct: 391 SPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT-DKLKEAW 449
Query: 177 QIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTY 229
+F + +G +PD+ Y T+I+GLCR G EA +L M+E GF PS Y
Sbjct: 450 CLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 125/434 (28%), Positives = 207/434 (47%), Gaps = 14/434 (3%)
Query: 9 WPKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRS 68
+PK T + + L+ I A + + Y + + TF +MI+ L + +
Sbjct: 187 YPKTETCNHILTLLSRLNRIENAWVFYADM---YRMEIKSNVYTFNIMINVLCKEGKLKK 243
Query: 69 AEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVID 128
A+G L M+ T T+ +G+ R A + +M+ + ++Y ++
Sbjct: 244 AKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILS 303
Query: 129 ILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQ 188
+ E RA REM+++G+ P VS NILI+ C N ++ A EM +G
Sbjct: 304 WMCNEG---RASEVLREMKEIGLVPDSVSYNILIRG-CSNNGDLEMAFAYRDEMVKQGMV 359
Query: 189 PDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRL 248
P YTY TLI+GL + A+ L E+ EKG VTY LI+G CQ + +A L
Sbjct: 360 PTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFAL 419
Query: 249 LEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCK 308
+EM +GI+P FTY++L+ LC+ + +A EL E +V K +P++V TL++G C
Sbjct: 420 HDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCA 479
Query: 309 EGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRAT 368
G A +L M + + P+ Y ++ G C +++A + EM GI P +
Sbjct: 480 IGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHIS 539
Query: 369 WSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAA 428
+ NT++ G D+ AF + M + G + + T++ L+K K + A
Sbjct: 540 Y-------NTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAE 592
Query: 429 RILEEMISDGCVPD 442
+L EM S+G VP+
Sbjct: 593 ELLREMKSEGIVPN 606
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 194/390 (49%), Gaps = 40/390 (10%)
Query: 96 GRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSV 155
R++R +A + M ++K ++ +I++L +E +K+A F M GI P++
Sbjct: 201 SRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTI 260
Query: 156 VSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEA----K 211
V+ N L++ + I+ A I EM ++G QPD TY +++ +C G SE K
Sbjct: 261 VTYNTLVQGFSL-RGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMK 319
Query: 212 EL--------FN--------------------EMEEKGFSPSVVTYTSLIHGMCQSDNLG 243
E+ +N EM ++G P+ TY +LIHG+ + +
Sbjct: 320 EIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIE 379
Query: 244 EAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLI 303
A L+ E+++ GI + TY+ L++G C+ G + +A L + M+T +P TY +LI
Sbjct: 380 AAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLI 439
Query: 304 NGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGIS 363
LC++ K EA E+ +++ +G+KP+ + ++ G CA + A + + EM + I+
Sbjct: 440 YVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSIN 499
Query: 364 PSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGD 423
P T+ N +++GLC A +L M+ RGI + +++ LI + K+GD
Sbjct: 500 PDDVTY-------NCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGD 552
Query: 424 LNKAARILEEMISDGCVPDKGIWDVVMGGL 453
A + +EM+S G P ++ ++ GL
Sbjct: 553 TKHAFMVRDEMLSLGFNPTLLTYNALLKGL 582
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 146/317 (46%), Gaps = 11/317 (3%)
Query: 136 VKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYG 195
V AI + M++ G P + N ++ L + I++A + +M + + YT+
Sbjct: 171 VDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNR-IENAWVFYADMYRMEIKSNVYTFN 229
Query: 196 TLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKN 255
+IN LC+ G + +AK ME G P++VTY +L+ G + A ++ EMK
Sbjct: 230 IMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSK 289
Query: 256 GIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEA 315
G +P++ TY+ ++ +C G +A E+L M P+ V+Y LI G G A
Sbjct: 290 GFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMA 346
Query: 316 VEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRM 375
D M QG+ P Y +I G + + A I E+ GI T+
Sbjct: 347 FAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTY------ 400
Query: 376 HNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMI 435
N ++ G C + D+ +AF L+ M T GI T+ LI C++ +A + E+++
Sbjct: 401 -NILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVV 459
Query: 436 SDGCVPDKGIWDVVMGG 452
G PD + + +M G
Sbjct: 460 GKGMKPDLVMMNTLMDG 476
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 154/307 (50%), Gaps = 11/307 (3%)
Query: 154 SVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKEL 213
S + ++L++ C+ + +D A++ F+ M +G P + T ++ L R+ + A
Sbjct: 154 STILFDLLVRCCCQLR-MVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVF 212
Query: 214 FNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCK 273
+ +M +V T+ +I+ +C+ L +A L M+ GI+P + TY+TL+ G
Sbjct: 213 YADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSL 272
Query: 274 GGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGL 333
G A ++ M +K +P+M TY +++ +C EG+ A E+L M+ GL P++
Sbjct: 273 RGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVS 329
Query: 334 YGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAF 393
Y +I G + A + DEMV G+ P+ T+ NT++ GL A
Sbjct: 330 YNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTY-------NTLIHGLFMENKIEAAE 382
Query: 394 QLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
L +R +GI ++ T++ LI +C+ GD KA + +EM++DG P + + ++ L
Sbjct: 383 ILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVL 442
Query: 454 WDRKKVR 460
+ K R
Sbjct: 443 CRKNKTR 449
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 125/258 (48%), Gaps = 7/258 (2%)
Query: 52 TFGVMISRLVAANQFRSAEGLLERMKQENCV---VTEDILLTICRGYGRVHRPLDAIRVF 108
T+ +I L N+ +AE L+ ++++ V VT +IL+ GY + A +
Sbjct: 364 TYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILIN---GYCQHGDAKKAFALH 420
Query: 109 HKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKN 168
+M ++ TQ +Y ++I +L +N + A + ++ G+ P +V +N L+ C
Sbjct: 421 DEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAI 480
Query: 169 KETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVT 228
+D A + EM PD TY L+ GLC G EA+EL EM+ +G P ++
Sbjct: 481 G-NMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHIS 539
Query: 229 YTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMV 288
Y +LI G + + A + +EM G P + TY+ L+ GL K A ELL M
Sbjct: 540 YNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMK 599
Query: 289 TKHNRPNMVTYGTLINGL 306
++ PN ++ ++I +
Sbjct: 600 SEGIVPNDSSFCSVIEAM 617
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 4/214 (1%)
Query: 27 DINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTED 86
D KA + D ++G + T+ +I L N+ R A+ L E++ +
Sbjct: 412 DAKKAFALHDEMM---TDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLV 468
Query: 87 ILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREM 146
++ T+ G+ + A + +M+ + +Y ++ L E + A EM
Sbjct: 469 MMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEM 528
Query: 147 RKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGS 206
++ GI P +S N LI K +T A + EM + G P TY L+ GL +
Sbjct: 529 KRRGIKPDHISYNTLISGYSKKGDT-KHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQE 587
Query: 207 VSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSD 240
A+EL EM+ +G P+ ++ S+I M D
Sbjct: 588 GELAEELLREMKSEGIVPNDSSFCSVIEAMSNLD 621
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 197/399 (49%), Gaps = 16/399 (4%)
Query: 57 ISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQL 116
I V AN+ A LERM+ V + RGY +HR +AI + M
Sbjct: 284 IDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGC 343
Query: 117 KFTQKSYLTVIDILVEENHVKRAIAFYREMRKM----GIPPSVVSLNILIKALCKNKETI 172
+ SY T++ L +E KR + M+KM G+ P V+ N LI L K+
Sbjct: 344 LPDKVSYYTIMGYLCKE---KRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHA- 399
Query: 173 DSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF-SPSVVTYTS 231
D AL + +G + D Y +++ LC+ G +SEAK+L NEM KG P VVTYT+
Sbjct: 400 DEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTA 459
Query: 232 LIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKH 291
+++G C+ + +A +LL+ M +G +PN +Y+ L++G+C+ G SL+A E++ M
Sbjct: 460 VVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHW 519
Query: 292 NRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAA 351
PN +TY +++GL +EGK SEA +++ M L+G P ++ C +A
Sbjct: 520 WSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEAR 579
Query: 352 NFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTF 411
F++E + G + ++V TV+ G C N + A + M ++ T+
Sbjct: 580 KFMEECLNKGCA-------INVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTY 632
Query: 412 DCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVM 450
L+ K+G + +A ++++M+ G P + V+
Sbjct: 633 TTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVI 671
Score = 178 bits (451), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 218/461 (47%), Gaps = 47/461 (10%)
Query: 11 KQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAE 70
+ + S V +++++ D A+ F A ++ +RHD + M+ L + +
Sbjct: 170 RSLKPSQVCAVLRSQDDERVALKFFYWADRQWR--YRHDPMVYYSMLEVLSKTKLCQGSR 227
Query: 71 GLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDIL 130
+L MK+ T + + Y R + DA++V M+ ++ T ID+
Sbjct: 228 RVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVF 287
Query: 131 VEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPD 190
V N +++A+ F M+ +GI P+VV+ N +I+ C + ++ A+++ +M ++GC PD
Sbjct: 288 VRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYC-DLHRVEEAIELLEDMHSKGCLPD 346
Query: 191 SYTYGTLINGLCRMGSVSEAKELFNEM-EEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLL 249
+Y T++ LC+ + E ++L +M +E G P VTY +LIH + + D+ EA+ L
Sbjct: 347 KVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFL 406
Query: 250 EEMKKNGIE------------------------------------PNVFTYSTLMDGLCK 273
++ ++ G P+V TY+ +++G C+
Sbjct: 407 KDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCR 466
Query: 274 GGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGL 333
G +A +LL++M T ++PN V+Y L+NG+C+ GK EA E+++ PN+
Sbjct: 467 LGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSIT 526
Query: 334 YGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAF 393
Y I+ G +A + + EMVL G P N ++Q LC + + A
Sbjct: 527 YSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEI-------NLLLQSLCRDGRTHEAR 579
Query: 394 QLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEM 434
+ +G +I + F +I FC+ +L+ A +L++M
Sbjct: 580 KFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDM 620
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 187/388 (48%), Gaps = 10/388 (2%)
Query: 51 TTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHK 110
T+ MI ++ A LLE M + C+ + TI + R ++ + K
Sbjct: 313 VTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKK 372
Query: 111 M-EDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNK 169
M ++ L Q +Y T+I +L + +H A+ F ++ ++ G + + ++ ALCK
Sbjct: 373 MAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEG 432
Query: 170 ETIDSALQIFHEMPNRG-CQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVT 228
+ A + +EM ++G C PD TY ++NG CR+G V +AK+L M G P+ V+
Sbjct: 433 R-MSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVS 491
Query: 229 YTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMV 288
YT+L++GMC++ EA ++ +++ PN TYS +M GL + G +A +++ MV
Sbjct: 492 YTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMV 551
Query: 289 TKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQ 348
K P V L+ LC++G+ EA + ++ +G N + +I GFC
Sbjct: 552 LKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELD 611
Query: 349 DAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEI 408
A + +D+M L T++ T+V L A +L M +GI
Sbjct: 612 AALSVLDDMYLINKHADVFTYT-------TLVDTLGKKGRIAEATELMKKMLHKGIDPTP 664
Query: 409 DTFDCLIKCFCKRGDLNKAARILEEMIS 436
T+ +I +C+ G ++ ILE+MIS
Sbjct: 665 VTYRTVIHRYCQMGKVDDLVAILEKMIS 692
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 125/280 (44%), Gaps = 7/280 (2%)
Query: 175 ALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIH 234
AL++ M G +P+ T I+ R + +A M+ G P+VVTY +I
Sbjct: 261 ALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIR 320
Query: 235 GMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNR- 293
G C + EAI LLE+M G P+ +Y T+M LCK ++ +L++ M +H
Sbjct: 321 GYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLV 380
Query: 294 PNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANF 353
P+ VTY TLI+ L K EA+ L + +G + + Y I+ C +A +
Sbjct: 381 PDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDL 440
Query: 354 IDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDC 413
I+EM+ G P V + VV G C + +A +L M T G ++
Sbjct: 441 INEMLSKGHCPP------DVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTA 494
Query: 414 LIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
L+ C+ G +A ++ P+ + V+M GL
Sbjct: 495 LLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGL 534
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 131/274 (47%), Gaps = 9/274 (3%)
Query: 182 MPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDN 241
M RG + ++ R G + +A ++ M+ G P+++ + I +++
Sbjct: 233 MKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANR 292
Query: 242 LGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGT 301
L +A+R LE M+ GI PNV TY+ ++ G C +A+ELLE M +K P+ V+Y T
Sbjct: 293 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYT 352
Query: 302 LINGLCKEGKFSEAVEILDRM-RLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLG 360
++ LCKE + E +++ +M + GL P+ Y +I +A F+ +
Sbjct: 353 IMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEK 412
Query: 361 GISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRG-ISIEIDTFDCLIKCFC 419
G + +S +V LC A L M ++G ++ T+ ++ FC
Sbjct: 413 GFRIDKLGYS-------AIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFC 465
Query: 420 KRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
+ G+++KA ++L+ M + G P+ + ++ G+
Sbjct: 466 RLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGM 499
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 123/266 (46%), Gaps = 9/266 (3%)
Query: 190 DSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLL 249
D Y +++ L + ++ + M+ +G + ++ ++ ++ L +A+++L
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265
Query: 250 EEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKE 309
M++ G+EPN+ +T +D + +A+ LE M PN+VTY +I G C
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325
Query: 310 GKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVL-GGISPSRAT 368
+ EA+E+L+ M +G P+ Y I+ C + + + +M G+ P + T
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVT 385
Query: 369 WSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAA 428
+ NT++ L + + A + +G I+ + ++ CK G +++A
Sbjct: 386 Y-------NTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAK 438
Query: 429 RILEEMISDG-CVPDKGIWDVVMGGL 453
++ EM+S G C PD + V+ G
Sbjct: 439 DLINEMLSKGHCPPDVVTYTAVVNGF 464
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 129/293 (44%), Gaps = 3/293 (1%)
Query: 49 DHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVF 108
D T+ +++ + A+ LL+ M + G R + L+A +
Sbjct: 453 DVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMM 512
Query: 109 HKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKN 168
+ E+ +Y ++ L E + A REM G P V +N+L+++LC++
Sbjct: 513 NMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRD 572
Query: 169 KETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVT 228
T A + E N+GC + + T+I+G C+ + A + ++M V T
Sbjct: 573 GRT-HEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFT 631
Query: 229 YTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMV 288
YT+L+ + + + EA L+++M GI+P TY T++ C+ G + +LE M+
Sbjct: 632 YTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMI 691
Query: 289 TKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGF 341
++ Y +I LC GK EA +L ++ + +A ++ G+
Sbjct: 692 SRQK--CRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGY 742
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 77/167 (46%), Gaps = 7/167 (4%)
Query: 293 RPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAAN 352
R + + Y +++ L K + +L M+ +G+ + +++ + A +DA
Sbjct: 204 RHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALK 263
Query: 353 FIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFD 412
+ M G+ P+ + + NT + +A + M+ GI + T++
Sbjct: 264 VLTLMQRAGVEPN-------LLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYN 316
Query: 413 CLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
C+I+ +C + +A +LE+M S GC+PDK + +MG L K++
Sbjct: 317 CMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRI 363
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 169/331 (51%), Gaps = 8/331 (2%)
Query: 123 YLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEM 182
Y +I + + E ++ ++ +R M G PSV + N ++ ++ K+ E + S EM
Sbjct: 166 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDV-SVWSFLKEM 224
Query: 183 PNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNL 242
R PD T+ LIN LC GS ++ L +ME+ G++P++VTY +++H C+
Sbjct: 225 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 284
Query: 243 GEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTL 302
AI LL+ MK G++ +V TY+ L+ LC+ + LL M + PN VTY TL
Sbjct: 285 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL 344
Query: 303 INGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGI 362
ING EGK A ++L+ M GL PN + +I G + ++++A M G+
Sbjct: 345 INGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL 404
Query: 363 SPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRG 422
+PS ++ + ++ GLC N + A Y+ M+ G+ + T+ +I CK G
Sbjct: 405 TPSEVSYGV-------LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 457
Query: 423 DLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
L++A +L EM DG PD + ++ G
Sbjct: 458 FLDEAVVLLNEMSKDGIDPDIVTYSALINGF 488
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 116/472 (24%), Positives = 202/472 (42%), Gaps = 62/472 (13%)
Query: 49 DHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVF 108
D TF ++I+ L A F + L+++M++ T T+ Y + R AI +
Sbjct: 232 DVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELL 291
Query: 109 HKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA---- 164
M+ + +Y +I L N + + R+MRK I P+ V+ N LI
Sbjct: 292 DHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNE 351
Query: 165 -----------------LCKNKETIDS-------------ALQIFHEMPNRGCQPDSYTY 194
L N T ++ AL++F+ M +G P +Y
Sbjct: 352 GKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSY 411
Query: 195 GTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKK 254
G L++GLC+ A+ + M+ G +TYT +I G+C++ L EA+ LL EM K
Sbjct: 412 GVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSK 471
Query: 255 NGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSE 314
+GI+P++ TYS L++G CK G A E++ + PN + Y TLI C+ G E
Sbjct: 472 DGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKE 531
Query: 315 AVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVR 374
A+ I + M L+G + + +++ C A +A F+ M GI P+ ++ +
Sbjct: 532 AIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLIN 591
Query: 375 ----------------------------MHNTVVQGLCSNVDSPRAFQLYLSMRTRGISI 406
+ ++++GLC A + S+ ++
Sbjct: 592 GYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAV 651
Query: 407 EIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKK 458
+ ++ L+ CK G+L KA + EM+ +PD + ++ GL + K
Sbjct: 652 DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 703
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/453 (24%), Positives = 192/453 (42%), Gaps = 44/453 (9%)
Query: 43 SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPL 102
S G +H TF +I ++ F+ A + M+ + +E + G + +
Sbjct: 366 SFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCK-NAEF 424
Query: 103 DAIRVFH-KMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNIL 161
D R F+ +M+ + + +Y +ID L + + A+ EM K GI P +V+ + L
Sbjct: 425 DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSAL 484
Query: 162 IKALCK------NKETI----------------------------DSALQIFHEMPNRGC 187
I CK KE + A++I+ M G
Sbjct: 485 INGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGH 544
Query: 188 QPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIR 247
D +T+ L+ LC+ G V+EA+E M G P+ V++ LI+G S +A
Sbjct: 545 TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFS 604
Query: 248 LLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLC 307
+ +EM K G P FTY +L+ GLCKGGH +A + L+ + + V Y TL+ +C
Sbjct: 605 VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMC 664
Query: 308 KEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEM-VLGGISPSR 366
K G ++AV + M + + P++ Y +ISG C A F E G + P++
Sbjct: 665 KSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNK 724
Query: 367 ATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNK 426
M+ V G+ M G + +I T + +I + + G + K
Sbjct: 725 V-------MYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEK 777
Query: 427 AARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
+L EM + P+ +++++ G RK V
Sbjct: 778 TNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDV 810
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/438 (21%), Positives = 184/438 (42%), Gaps = 30/438 (6%)
Query: 49 DHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVF 108
D + +++ + + A L M Q + + ++ G R + + AI
Sbjct: 652 DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFA 711
Query: 109 HKMEDFQLKFTQKS-YLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCK 167
+ E K Y +D + + K I F +M +G P +V+ N +I +
Sbjct: 712 KEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSR 771
Query: 168 NKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVV 227
+ I+ + EM N+ P+ TY L++G + VS + L+ + G P +
Sbjct: 772 MGK-IEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKL 830
Query: 228 TYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMM 287
T SL+ G+C+S+ L +++L+ G+E + +T++ L+ C G A +L+++M
Sbjct: 831 TCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVM 890
Query: 288 VTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSY 347
+ + T +++ L + +F E+ +L M QG+ P + Y +I+G C
Sbjct: 891 TSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDI 950
Query: 348 QDAANFIDEMVLGGISPSRATWSLHVRM----------------------------HNTV 379
+ A +EM+ I P S VR T+
Sbjct: 951 KTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTL 1010
Query: 380 VQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGC 439
+ C N + A +L + M G+ +++ +++ LI C +GD+ A + EEM DG
Sbjct: 1011 MHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGF 1070
Query: 440 VPDKGIWDVVMGGLWDRK 457
+ + + ++ GL R+
Sbjct: 1071 LANATTYKALIRGLLARE 1088
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 1/219 (0%)
Query: 136 VKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYG 195
+ A + M +GI + + ++ L +N +S + + HEM +G P+S Y
Sbjct: 880 INWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRM-VLHEMSKQGISPESRKYI 938
Query: 196 TLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKN 255
LINGLCR+G + A + EM P V ++++ + + EA LL M K
Sbjct: 939 GLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKM 998
Query: 256 GIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEA 315
+ P + +++TLM CK G+ ++A+EL +M + ++V+Y LI GLC +G + A
Sbjct: 999 KLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALA 1058
Query: 316 VEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFI 354
E+ + M+ G NA Y +I G A + A+ I
Sbjct: 1059 FELYEEMKGDGFLANATTYKALIRGLLARETAFSGADII 1097
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 183/429 (42%), Gaps = 16/429 (3%)
Query: 15 SSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLE 74
+SL+ L + K + + + + AE + + + + A Q+++ G+
Sbjct: 692 TSLISGLCRKGKTV---IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA--GIYF 746
Query: 75 RMKQENCVVTEDILLT--ICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVE 132
R + +N T DI+ T + GY R+ + + +M + +Y ++ +
Sbjct: 747 REQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSK 806
Query: 133 ENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSY 192
V + YR + GI P ++ + L+ +C++ ++ L+I RG + D Y
Sbjct: 807 RKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICES-NMLEIGLKILKAFICRGVEVDRY 865
Query: 193 TYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEM 252
T+ LI+ C G ++ A +L M G S T +++ + ++ E+ +L EM
Sbjct: 866 TFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEM 925
Query: 253 KKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKF 312
K GI P Y L++GLC+ G A + E M+ P V ++ L K GK
Sbjct: 926 SKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKA 985
Query: 313 SEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLH 372
EA +L M L P + ++ C N I+ + L + S L
Sbjct: 986 DEATLLLRFMLKMKLVPTIASFTTLMHLCC------KNGNVIEALELR-VVMSNCGLKLD 1038
Query: 373 VRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKR-GDLNKAARIL 431
+ +N ++ GLC+ D AF+LY M+ G T+ LI+ R + A IL
Sbjct: 1039 LVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIIL 1098
Query: 432 EEMISDGCV 440
+++++ G +
Sbjct: 1099 KDLLARGFI 1107
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 88/200 (44%), Gaps = 7/200 (3%)
Query: 260 NVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEIL 319
N Y L+ + G ++E+ +M P++ T ++ + K G+ L
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 221
Query: 320 DRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTV 379
M + + P+ + +I+ CA S++ ++ + +M G +P+ T+ NTV
Sbjct: 222 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTY-------NTV 274
Query: 380 VQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGC 439
+ C A +L M+++G+ ++ T++ LI C+ + K +L +M
Sbjct: 275 LHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMI 334
Query: 440 VPDKGIWDVVMGGLWDRKKV 459
P++ ++ ++ G + KV
Sbjct: 335 HPNEVTYNTLINGFSNEGKV 354
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 178 bits (451), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 196/365 (53%), Gaps = 10/365 (2%)
Query: 90 TICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKM 149
++ G+ + + + A+ +F KME ++ +I+ + +++A+ FY++M +
Sbjct: 344 SLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVL 403
Query: 150 GIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSE 209
G+ PSV ++ +I+ K ++ + AL++F E G + + T+++ LC+ G E
Sbjct: 404 GLTPSVFHVHTIIQGWLKGQKH-EEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDE 461
Query: 210 AKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMD 269
A EL ++ME +G P+VV+Y +++ G C+ N+ A + + + G++PN +TYS L+D
Sbjct: 462 ATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILID 521
Query: 270 GLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRM-RLQGLK 328
G + A+E++ M + + N V Y T+INGLCK G+ S+A E+L M + L
Sbjct: 522 GCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLC 581
Query: 329 PNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVD 388
+ Y II GF A +EM GISP+ T++ +++ GLC N
Sbjct: 582 VSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYT-------SLMNGLCKNNR 634
Query: 389 SPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDV 448
+A ++ M+ +G+ ++I + LI FCKR ++ A+ + E++ +G P + I++
Sbjct: 635 MDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNS 694
Query: 449 VMGGL 453
++ G
Sbjct: 695 LISGF 699
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/372 (30%), Positives = 195/372 (52%), Gaps = 12/372 (3%)
Query: 25 EKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVT 84
+K+++ A ++F + + G + ++ T+ ++I + ++A ++ M N V
Sbjct: 491 QKNMDLARIVFSNILEK---GLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVN 547
Query: 85 EDILLTICRGYGRVHRPLDAIRVFHKM-EDFQLKFTQKSYLTVIDILVEENHVKRAIAFY 143
+ TI G +V + A + M E+ +L + SY ++ID +E + A+A Y
Sbjct: 548 GVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAY 607
Query: 144 REMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCR 203
EM GI P+V++ L+ LCKN +D AL++ EM N+G + D YG LI+G C+
Sbjct: 608 EEMCGNGISPNVITYTSLMNGLCKNNR-MDQALEMRDEMKNKGVKLDIPAYGALIDGFCK 666
Query: 204 MGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFT 263
++ A LF+E+ E+G +PS Y SLI G N+ A+ L ++M K+G+ ++ T
Sbjct: 667 RSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGT 726
Query: 264 YSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMR 323
Y+TL+DGL K G+ + A EL M P+ + Y ++NGL K+G+F + V++ + M+
Sbjct: 727 YTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMK 786
Query: 324 LQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGL 383
+ PN +Y +I+G + +A DEM+ GI P AT+ + +V G
Sbjct: 787 KNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDI-------LVSGQ 839
Query: 384 CSNVDSPRAFQL 395
N+ RA L
Sbjct: 840 VGNLQPVRAASL 851
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 213/429 (49%), Gaps = 15/429 (3%)
Query: 27 DINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTED 86
D+ A+++FD E G + TF V+I + A ++M+ +
Sbjct: 354 DLVSALVLFDKMEKE---GPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVF 410
Query: 87 ILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYL-TVIDILVEENHVKRAIAFYRE 145
+ TI +G+ + + +A+++F E F+ T++ L ++ A +
Sbjct: 411 HVHTIIQGWLKGQKHEEALKLFD--ESFETGLANVFVCNTILSWLCKQGKTDEATELLSK 468
Query: 146 MRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMG 205
M GI P+VVS N ++ C+ K +D A +F + +G +P++YTY LI+G R
Sbjct: 469 MESRGIGPNVVSYNNVMLGHCRQK-NMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNH 527
Query: 206 SVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEM-KKNGIEPNVFTY 264
A E+ N M + V Y ++I+G+C+ +A LL M ++ + + +Y
Sbjct: 528 DEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSY 587
Query: 265 STLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRL 324
++++DG K G A+ E M PN++TY +L+NGLCK + +A+E+ D M+
Sbjct: 588 NSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKN 647
Query: 325 QGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLC 384
+G+K + YG +I GFC S+ + A+ E++ G++PS+ ++N+++ G
Sbjct: 648 KGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQP-------IYNSLISGFR 700
Query: 385 SNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKG 444
+ + A LY M G+ ++ T+ LI K G+L A+ + EM + G VPD+
Sbjct: 701 NLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEI 760
Query: 445 IWDVVMGGL 453
I+ V++ GL
Sbjct: 761 IYTVIVNGL 769
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/466 (23%), Positives = 209/466 (44%), Gaps = 33/466 (7%)
Query: 10 PKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQF--R 67
P+Q + V ++ ++ +A L F + + F D F V+I LV++ + R
Sbjct: 67 PEQKDDASVIDVLLNRRNNPEAALRFYNWARPWRGSF-EDGDVFWVLIHILVSSPETYGR 125
Query: 68 SAEGLLERMKQENCVVTEDILLT--------------------ICRGYGRVHRPLDAIRV 107
+++ L+ + N +L++ + Y + + A+ +
Sbjct: 126 ASDLLIRYVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDI 185
Query: 108 FHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCK 167
++M + + + LV+ N + A Y M +G+ V+ +L++A +
Sbjct: 186 VNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLR 245
Query: 168 NKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFS-PSV 226
+E AL++ RG +PDS Y + C+ ++ A L EM+EK PS
Sbjct: 246 -EEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQ 304
Query: 227 VTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEM 286
TYTS+I + N+ +AIRL +EM +GI NV ++L+ G CK + A+ L +
Sbjct: 305 ETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDK 364
Query: 287 MVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASS 346
M + PN VT+ LI K G+ +A+E +M + GL P+ II G+
Sbjct: 365 MEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQK 424
Query: 347 YQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISI 406
+++A DE G++ +V + NT++ LC + A +L M +RGI
Sbjct: 425 HEEALKLFDESFETGLA--------NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGP 476
Query: 407 EIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGG 452
+ +++ ++ C++ +++ A + ++ G P+ + +++ G
Sbjct: 477 NVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDG 522
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 147/354 (41%), Gaps = 26/354 (7%)
Query: 107 VFHKMEDFQLKFTQKSYLTVIDILVEE-NHVKRAIAFYREMRKM-GIPPSVVSLNILIKA 164
V K+ K QK +VID+L+ N+ + A+ FY R G +LI
Sbjct: 56 VTSKVSLLSAKPEQKDDASVIDVLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHI 115
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
L + ET A + Y + N M SV +K L + + GF
Sbjct: 116 LVSSPETYGRASDLL------------IRYVSTSNP-TPMASVLVSK-LVDSAKSFGFEV 161
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
+ + L++ + A+ ++ +M + + P + + L + +A EL
Sbjct: 162 NSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELY 221
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAA 344
MV + VT L+ +E K +EA+E+L R +G +P++ LY + C
Sbjct: 222 SRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKT 281
Query: 345 SSYQDAANFIDEMVLGGIS-PSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRG 403
A + + EM + PS+ T++ + +V QG N+D A +L M + G
Sbjct: 282 LDLAMANSLLREMKEKKLCVPSQETYTSVILA--SVKQG---NMDD--AIRLKDEMLSDG 334
Query: 404 ISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRK 457
IS+ + LI CK DL A + ++M +G P+ + V++ W RK
Sbjct: 335 ISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIE--WFRK 386
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 189/391 (48%), Gaps = 16/391 (4%)
Query: 76 MKQEN--CVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEE 133
MKQ++ ++ ++ I G+ R A +F+ +++ SY ++I
Sbjct: 162 MKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANS 221
Query: 134 NHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYT 193
+ A+ +++M + G P++++ N+++ K + + +M + G PD+YT
Sbjct: 222 GRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYT 281
Query: 194 YGTLINGLCRMGSV-SEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEM 252
Y TLI C+ GS+ EA ++F EM+ GFS VTY +L+ +S EA+++L EM
Sbjct: 282 YNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEM 340
Query: 253 KKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKF 312
NG P++ TY++L+ + G +AMEL M K +P++ TY TL++G + GK
Sbjct: 341 VLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKV 400
Query: 313 SEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLH 372
A+ I + MR G KPN + I + + + DE+ + G+SP TW
Sbjct: 401 ESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTW--- 457
Query: 373 VRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILE 432
NT++ N ++ M+ G E +TF+ LI + + G +A +
Sbjct: 458 ----NTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYR 513
Query: 433 EMISDGCVPDKGIWDVVM-----GGLWDRKK 458
M+ G PD ++ V+ GG+W++ +
Sbjct: 514 RMLDAGVTPDLSTYNTVLAALARGGMWEQSE 544
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/501 (21%), Positives = 222/501 (44%), Gaps = 72/501 (14%)
Query: 16 SLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLER 75
+++ ++ E ++ A MF+ +GF D ++ +IS + ++R A + ++
Sbjct: 177 AIIISMLGKEGRVSSAANMFNGLQ---EDGFSLDVYSYTSLISAFANSGRYREAVNVFKK 233
Query: 76 MKQENC---VVTEDILLTI-----------------------------------CRGYGR 97
M+++ C ++T +++L + C G
Sbjct: 234 MEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGS 293
Query: 98 VHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVS 157
+H+ +A +VF +M+ + + +Y ++D+ + + K A+ EM G PS+V+
Sbjct: 294 LHQ--EAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVT 351
Query: 158 LNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEM 217
N LI A ++ +D A+++ ++M +G +PD +TY TL++G R G V A +F EM
Sbjct: 352 YNSLISAYARDG-MLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM 410
Query: 218 EEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHS 277
G P++ T+ + I E +++ +E+ G+ P++ T++TL+ + G
Sbjct: 411 RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMD 470
Query: 278 LQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKI 337
+ + + M P T+ TLI+ + G F +A+ + RM G+ P+ Y +
Sbjct: 471 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTV 530
Query: 338 ISGFCAASSYQDAANFIDEMVLGGISPSRATW-----------------SLHVRMHNTVV 380
++ ++ + + EM G P+ T+ SL +++ V+
Sbjct: 531 LAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVI 590
Query: 381 QG----------LCSNVD-SPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAAR 429
+ +CS D P A + + ++ RG S +I T + ++ + +R + KA
Sbjct: 591 EPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANG 650
Query: 430 ILEEMISDGCVPDKGIWDVVM 450
+L+ M G P ++ +M
Sbjct: 651 VLDYMKERGFTPSMATYNSLM 671
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/408 (21%), Positives = 178/408 (43%), Gaps = 8/408 (1%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
G + D T+ ++S A + SA + E M+ C + YG + +
Sbjct: 379 GTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEM 438
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
+++F ++ L ++ T++ + + ++EM++ G P + N LI A
Sbjct: 439 MKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISA 498
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
+ + + A+ ++ M + G PD TY T++ L R G +++++ EME+ P
Sbjct: 499 YSRCG-SFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKP 557
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
+ +TY SL+H +G L EE+ IEP TL+ K +A
Sbjct: 558 NELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAF 617
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAA 344
+ + P++ T ++++ + ++A +LD M+ +G P+ Y ++ +
Sbjct: 618 SELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRS 677
Query: 345 SSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGI 404
+ + + + E++ GI P + +NTV+ C N A +++ MR GI
Sbjct: 678 ADFGKSEEILREILAKGIKPD-------IISYNTVIYAYCRNTRMRDASRIFSEMRNSGI 730
Query: 405 SIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGG 452
++ T++ I + +A ++ MI GC P++ ++ ++ G
Sbjct: 731 VPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDG 778
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 143/313 (45%), Gaps = 1/313 (0%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
GF + TF +IS F A + RM T+ R +
Sbjct: 484 GFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQS 543
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
+V +MED + K + +Y +++ + + E+ I P V L L+
Sbjct: 544 EKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLV-L 602
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
+C + + A + F E+ RG PD T ++++ R V++A + + M+E+GF+P
Sbjct: 603 VCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTP 662
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
S+ TY SL++ +S + G++ +L E+ GI+P++ +Y+T++ C+ A +
Sbjct: 663 SMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIF 722
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAA 344
M P+++TY T I + F EA+ ++ M G +PN Y I+ G+C
Sbjct: 723 SEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKL 782
Query: 345 SSYQDAANFIDEM 357
+ +A F++++
Sbjct: 783 NRKDEAKLFVEDL 795
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 154/340 (45%), Gaps = 8/340 (2%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
G D T+ +++ G+ + MK+ V + T+ Y R A
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
+ V+ +M D + +Y TV+ L +++ EM P+ ++ L+ A
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
KE I + E+ + +P + TL+ + + EA+ F+E++E+GFSP
Sbjct: 569 YANGKE-IGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSP 627
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
+ T S++ + + +A +L+ MK+ G P++ TY++LM + ++ E+L
Sbjct: 628 DITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEIL 687
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAA 344
++ K +P++++Y T+I C+ + +A I MR G+ P+ Y I + A
Sbjct: 688 REILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAAD 747
Query: 345 SSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLC 384
S +++A + M+ G P++ T+ N++V G C
Sbjct: 748 SMFEEAIGVVRYMIKHGCRPNQNTY-------NSIVDGYC 780
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 138/291 (47%), Gaps = 11/291 (3%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
G D +T+ +++ L + +E +L M+ C E ++ Y
Sbjct: 519 GVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKE---- 574
Query: 105 IRVFHKM--EDFQLKFTQKSYL--TVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNI 160
I + H + E + ++ L T++ + + + + A + E+++ G P + +LN
Sbjct: 575 IGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNS 634
Query: 161 LIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
++ ++ ++ + A + M RG P TY +L+ R +++E+ E+ K
Sbjct: 635 MV-SIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAK 693
Query: 221 GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQA 280
G P +++Y ++I+ C++ + +A R+ EM+ +GI P+V TY+T + +A
Sbjct: 694 GIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEA 753
Query: 281 MELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNA 331
+ ++ M+ RPN TY ++++G CK + EA ++ +R L P+A
Sbjct: 754 IGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR--NLDPHA 802
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 210/458 (45%), Gaps = 33/458 (7%)
Query: 21 LIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQEN 80
L+K +KD ++ F+ A N H T +++ L +F+SAE +L
Sbjct: 88 LLKIQKDYLLSLEFFNWAKTR--NPGSHSLETHAIVLHTLTKNRKFKSAESILR------ 139
Query: 81 CVVTEDILLTICRGYGRVHRP---LDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVK 137
D+L+ G V P DA+ ++ D T + + ++ +
Sbjct: 140 -----DVLVN-----GGVDLPAKVFDALLYSYRECDS----TPRVFDSLFKTFAHLKKFR 185
Query: 138 RAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTL 197
A + +M+ G P+V S N + +L + +D AL+ + EM P+ YT +
Sbjct: 186 NATDTFMQMKDYGFLPTVESCNAYMSSLL-GQGRVDIALRFYREMRRCKISPNPYTLNMV 244
Query: 198 INGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGI 257
++G CR G + + EL +ME GF + V+Y +LI G C+ L A++L M K+G+
Sbjct: 245 MSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGL 304
Query: 258 EPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVE 317
+PNV T++TL+ G C+ +A ++ M + PN VTY TLING ++G A
Sbjct: 305 QPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFR 364
Query: 318 ILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHN 377
+ M G++ + Y +I G C + + AA F+ E+ + P+ +T+S
Sbjct: 365 FYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFS------- 417
Query: 378 TVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISD 437
++ G C ++ R F+LY SM G TF+ L+ FC+ D + A+++L EM+
Sbjct: 418 ALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRR 477
Query: 438 GCVPDKGIWDVVMGGLWDRKKVRXXXXXXXXXXXKKFV 475
D V GL + K + KKF+
Sbjct: 478 SIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFL 515
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 210/458 (45%), Gaps = 33/458 (7%)
Query: 21 LIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQEN 80
L+K +KD ++ F+ A N H T +++ L +F+SAE +L
Sbjct: 88 LLKIQKDYLLSLEFFNWAKTR--NPGSHSLETHAIVLHTLTKNRKFKSAESILR------ 139
Query: 81 CVVTEDILLTICRGYGRVHRP---LDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVK 137
D+L+ G V P DA+ ++ D T + + ++ +
Sbjct: 140 -----DVLVN-----GGVDLPAKVFDALLYSYRECDS----TPRVFDSLFKTFAHLKKFR 185
Query: 138 RAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTL 197
A + +M+ G P+V S N + +L + +D AL+ + EM P+ YT +
Sbjct: 186 NATDTFMQMKDYGFLPTVESCNAYMSSLL-GQGRVDIALRFYREMRRCKISPNPYTLNMV 244
Query: 198 INGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGI 257
++G CR G + + EL +ME GF + V+Y +LI G C+ L A++L M K+G+
Sbjct: 245 MSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGL 304
Query: 258 EPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVE 317
+PNV T++TL+ G C+ +A ++ M + PN VTY TLING ++G A
Sbjct: 305 QPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFR 364
Query: 318 ILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHN 377
+ M G++ + Y +I G C + + AA F+ E+ + P+ +T+S
Sbjct: 365 FYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFS------- 417
Query: 378 TVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISD 437
++ G C ++ R F+LY SM G TF+ L+ FC+ D + A+++L EM+
Sbjct: 418 ALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRR 477
Query: 438 GCVPDKGIWDVVMGGLWDRKKVRXXXXXXXXXXXKKFV 475
D V GL + K + KKF+
Sbjct: 478 SIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFL 515
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 175 bits (444), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 184/383 (48%), Gaps = 9/383 (2%)
Query: 53 FGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKME 112
FG++I L N LE +K V + Y ++ A+ F +M+
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 113 DFQLKFTQKSYLTVIDILV-EENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKET 171
+F + +Y ++ +++ EE A A Y EM K P++ + IL+ L K T
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214
Query: 172 IDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTS 231
D A ++F +M RG P+ TY LI+GLC+ GS +A++LF EM+ G P V + +
Sbjct: 215 SD-AQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNA 273
Query: 232 LIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKH 291
L+ G C+ + EA LL +K+G + YS+L+DGL + QA EL M+ K+
Sbjct: 274 LLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKN 333
Query: 292 NRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAA 351
+P+++ Y LI GL K GK +A+++L M +G+ P+ Y +I C ++
Sbjct: 334 IKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGR 393
Query: 352 NFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTF 411
+ EM P T H ++ +C N A +++ + G S + TF
Sbjct: 394 SLQLEMSETESFPDACT-------HTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATF 446
Query: 412 DCLIKCFCKRGDLNKAARILEEM 434
+ LI CK G+L +A +L +M
Sbjct: 447 NALIDGLCKSGELKEARLLLHKM 469
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 175/365 (47%), Gaps = 46/365 (12%)
Query: 126 VIDILVEEN-----------------------------------HVKRAIAFYREMRKMG 150
VID+L E+N ++A+ + M++
Sbjct: 98 VIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFD 157
Query: 151 IPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEA 210
P V + N++++ + + + A +++EM C P+ YT+G L++GL + G S+A
Sbjct: 158 CRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDA 217
Query: 211 KELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDG 270
+++F++M +G SP+ VTYT LI G+CQ + +A +L EM+ +G P+ ++ L+DG
Sbjct: 218 QKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDG 277
Query: 271 LCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPN 330
CK G ++A ELL + + Y +LI+GL + ++++A E+ M + +KP+
Sbjct: 278 FCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPD 337
Query: 331 AGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSN--VD 388
LY +I G A +DA + M GISP + N V++ LC ++
Sbjct: 338 IILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCY-------NAVIKALCGRGLLE 390
Query: 389 SPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDV 448
R+ QL +S T + T LI C+ G + +A I E+ GC P ++
Sbjct: 391 EGRSLQLEMS-ETESFP-DACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNA 448
Query: 449 VMGGL 453
++ GL
Sbjct: 449 LIDGL 453
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 199/452 (44%), Gaps = 50/452 (11%)
Query: 43 SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENC---VVTEDILLTICRGYGRVH 99
S G D F V+IS A RMK+ +C V T +++L +
Sbjct: 120 SGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFF 179
Query: 100 RPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLN 159
+ A V+++M ++ ++D L ++ A + +M GI P+ V+
Sbjct: 180 --MLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYT 237
Query: 160 ILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEE 219
ILI LC+ + + D A ++F+EM G PDS + L++G C++G + EA EL E+
Sbjct: 238 ILISGLCQ-RGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEK 296
Query: 220 KGF-----------------------------------SPSVVTYTSLIHGMCQSDNLGE 244
GF P ++ YT LI G+ ++ + +
Sbjct: 297 DGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIED 356
Query: 245 AIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLIN 304
A++LL M GI P+ + Y+ ++ LC G + L M + P+ T+ LI
Sbjct: 357 ALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILIC 416
Query: 305 GLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISP 364
+C+ G EA EI + G P+ + +I G C + ++A + +M +G P
Sbjct: 417 SMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVG--RP 474
Query: 365 SRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSM---RTRGISIEIDTFDCLIKCFCKR 421
+ SL +R+ ++ + + V+S + Y + G S +I +++ LI FC+
Sbjct: 475 A----SLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRA 530
Query: 422 GDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
GD++ A ++L + G PD ++ ++ GL
Sbjct: 531 GDIDGALKLLNVLQLKGLSPDSVTYNTLINGL 562
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 197/448 (43%), Gaps = 69/448 (15%)
Query: 34 MFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQE----NCVVTEDILL 89
MFD T G + T+ ++IS L A L M+ + V +L
Sbjct: 220 MFDDMTGR---GISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLD 276
Query: 90 TICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKM 149
C+ GR+ + +R+F K + F L + Y ++ID L +A Y M K
Sbjct: 277 GFCK-LGRMVEAFELLRLFEK-DGFVLGL--RGYSSLIDGLFRARRYTQAFELYANMLKK 332
Query: 150 GIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSE 209
I P ++ ILI+ L K + I+ AL++ MP++G PD+Y Y +I LC G + E
Sbjct: 333 NIKPDIILYTILIQGLSKAGK-IEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEE 391
Query: 210 AKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMD 269
+ L EM E P T+T LI MC++ + EA + E++K+G P+V T++ L+D
Sbjct: 392 GRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALID 451
Query: 270 GLCKGGHSLQAMELLEMM----------------------------VTKHNR-------- 293
GLCK G +A LL M + K R
Sbjct: 452 GLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADT 511
Query: 294 ---PNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDA 350
P++V+Y LING C+ G A+++L+ ++L+GL P++ Y +I+G ++A
Sbjct: 512 GSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEA 571
Query: 351 ANFI----DEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISI 406
D + S TWS R +V AF L++ + +
Sbjct: 572 FKLFYAKDDFRHSPAVYRSLMTWS--CRKRKVLV-----------AFNLWMKYLKKISCL 618
Query: 407 EIDTFDCLIKCFCKRGDLNKAARILEEM 434
+ +T + + +CF K G+ +A R L E+
Sbjct: 619 DDETANEIEQCF-KEGETERALRRLIEL 645
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 136/290 (46%), Gaps = 18/290 (6%)
Query: 173 DSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSL 232
D Q E+ + G DSY + LI+ +MG +A E F M+E P V TY +
Sbjct: 109 DLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVI 168
Query: 233 IHGMCQSDNLGE-AIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKH 291
+ M + + A + EM K PN++T+ LMDGL K G + A ++ + M +
Sbjct: 169 LRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRG 228
Query: 292 NRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAA 351
PN VTY LI+GLC+ G +A ++ M+ G P++ + ++ GFC +A
Sbjct: 229 ISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAF 288
Query: 352 NFI-----DEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISI 406
+ D VLG +R +++++ GL +AF+LY +M + I
Sbjct: 289 ELLRLFEKDGFVLG------------LRGYSSLIDGLFRARRYTQAFELYANMLKKNIKP 336
Query: 407 EIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDR 456
+I + LI+ K G + A ++L M S G PD ++ V+ L R
Sbjct: 337 DIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGR 386
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 135/300 (45%), Gaps = 12/300 (4%)
Query: 49 DHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVF 108
D T ++I + R AE + +++ C + + G + +A +
Sbjct: 407 DACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLL 466
Query: 109 HKME-----DFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIK 163
HKME L+ + + D +VE + +A G P +VS N+LI
Sbjct: 467 HKMEVGRPASLFLRLSHSGNRS-FDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLIN 525
Query: 164 ALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFS 223
C+ + ID AL++ + + +G PDS TY TLINGL R+G EA +LF ++ S
Sbjct: 526 GFCRAGD-IDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHS 584
Query: 224 PSVVTYTSLIHGMCQSDNLGEAIRL-LEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAME 282
P+V Y SL+ C+ + A L ++ +KK + + ++ K G + +A+
Sbjct: 585 PAV--YRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDD--ETANEIEQCFKEGETERALR 640
Query: 283 LLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFC 342
L + T+ + + Y + GLC+ G+F EA+ + +R + + K+I G C
Sbjct: 641 RLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLC 700
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 96/211 (45%), Gaps = 8/211 (3%)
Query: 249 LEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCK 308
LEE+K G+ + + + L+ K G + +A+E M RP++ TY ++ + +
Sbjct: 115 LEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMR 174
Query: 309 EGKFSE-AVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRA 367
E F A + + M PN +G ++ G DA D+M GISP+R
Sbjct: 175 EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRV 234
Query: 368 TWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKA 427
T+++ ++ GLC + A +L+ M+T G + + L+ FCK G + +A
Sbjct: 235 TYTI-------LISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEA 287
Query: 428 ARILEEMISDGCVPDKGIWDVVMGGLWDRKK 458
+L DG V + ++ GL+ ++
Sbjct: 288 FELLRLFEKDGFVLGLRGYSSLIDGLFRARR 318
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 120/467 (25%), Positives = 209/467 (44%), Gaps = 44/467 (9%)
Query: 10 PKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSA 69
P IT S++ + + K I A + T + GF + + +I + A A
Sbjct: 328 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKK---GFPPNVIVYNNLIDSFIEAGSLNKA 384
Query: 70 EGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDI 129
+ + M + +T T+ +GY + + +A R+ +M Q S+ +VI +
Sbjct: 385 IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICL 444
Query: 130 LVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKE------------------- 170
L A+ F EM + P L LI LCK+ +
Sbjct: 445 LCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVD 504
Query: 171 ---------------TIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFN 215
+D A +I E+ RGC D +Y TLI+G C + EA +
Sbjct: 505 TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLD 564
Query: 216 EMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGG 275
EM ++G P TY+ LI G+ + + EAI+ ++ K+NG+ P+V+TYS ++DG CK
Sbjct: 565 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 624
Query: 276 HSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYG 335
+ + E + M++K+ +PN V Y LI C+ G+ S A+E+ + M+ +G+ PN+ Y
Sbjct: 625 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 684
Query: 336 KIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQL 395
+I G S ++A +EM + G+ P +V + ++ G + L
Sbjct: 685 SLIKGMSIISRVEEAKLLFEEMRMEGLEP-------NVFHYTALIDGYGKLGQMVKVECL 737
Query: 396 YLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPD 442
M ++ + T+ +I + + G++ +A+R+L EM G VPD
Sbjct: 738 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPD 784
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 188/377 (49%), Gaps = 15/377 (3%)
Query: 86 DILLTI-CRGYGR--VHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAF 142
D+L+ + C + R + LD V F K T LT LV N ++
Sbjct: 192 DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTS---LVRANEFQKCCEA 248
Query: 143 YREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLC 202
+ + K G+ P V I A CK + ++ A+++F +M G P+ T+ T+I+GL
Sbjct: 249 FDVVCK-GVSPDVYLFTTAINAFCKGGK-VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLG 306
Query: 203 RMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVF 262
G EA +M E+G P+++TY+ L+ G+ ++ +G+A +L+EM K G PNV
Sbjct: 307 MCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVI 366
Query: 263 TYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRM 322
Y+ L+D + G +A+E+ ++MV+K TY TLI G CK G+ A +L M
Sbjct: 367 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM 426
Query: 323 RLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQG 382
G N G + +I C+ + A F+ EM+L +SP + T++ G
Sbjct: 427 LSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLT-------TLISG 479
Query: 383 LCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPD 442
LC + +A +L+ +G ++ T + L+ C+ G L++A RI +E++ GCV D
Sbjct: 480 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 539
Query: 443 KGIWDVVMGGLWDRKKV 459
+ ++ ++ G +KK+
Sbjct: 540 RVSYNTLISGCCGKKKL 556
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/317 (32%), Positives = 163/317 (51%), Gaps = 7/317 (2%)
Query: 43 SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCV---VTEDILLTICRGYGRVH 99
+ GF D T ++ L A + A + + + CV V+ + L++ C G ++
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 557
Query: 100 RPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLN 159
+A +M LK +Y +I L N V+ AI F+ + ++ G+ P V + +
Sbjct: 558 ---EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 160 ILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEE 219
++I CK + T + + F EM ++ QP++ Y LI CR G +S A EL +M+
Sbjct: 615 VMIDGCCKAERT-EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673
Query: 220 KGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQ 279
KG SP+ TYTSLI GM + EA L EEM+ G+EPNVF Y+ L+DG K G ++
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 733
Query: 280 AMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIIS 339
LL M +K+ PN +TY +I G ++G +EA +L+ MR +G+ P++ Y + I
Sbjct: 734 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIY 793
Query: 340 GFCAASSYQDAANFIDE 356
G+ +A DE
Sbjct: 794 GYLKQGGVLEAFKGSDE 810
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/474 (24%), Positives = 201/474 (42%), Gaps = 35/474 (7%)
Query: 9 WPKQITSS-LVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFR 67
+P + T + L+ L++A + K FD G D F I+ +
Sbjct: 223 FPSKTTCNILLTSLVRA-NEFQKCCEAFDVVC----KGVSPDVYLFTTAINAFCKGGKVE 277
Query: 68 SAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVI 127
A L +M++ T+ G G R +A KM + ++ T +Y ++
Sbjct: 278 EAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILV 337
Query: 128 DILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGC 187
L + A +EM K G PP+V+ N LI + + +++ A++I M ++G
Sbjct: 338 KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE-AGSLNKAIEIKDLMVSKGL 396
Query: 188 QPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIR 247
S TY TLI G C+ G A+ L EM GF+ + ++TS+I +C A+R
Sbjct: 397 SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALR 456
Query: 248 LLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLC 307
+ EM + P +TL+ GLCK G +A+EL + K + T L++GLC
Sbjct: 457 FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC 516
Query: 308 KEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRA 367
+ GK EA I + +G + Y +ISG C +A F+DEMV G+ P
Sbjct: 517 EAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNY 576
Query: 368 TWSL----------------------------HVRMHNTVVQGLCSNVDSPRAFQLYLSM 399
T+S+ V ++ ++ G C + + + M
Sbjct: 577 TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEM 636
Query: 400 RTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
++ + ++ LI+ +C+ G L+ A + E+M G P+ + ++ G+
Sbjct: 637 MSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 120/467 (25%), Positives = 209/467 (44%), Gaps = 44/467 (9%)
Query: 10 PKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSA 69
P IT S++ + + K I A + T + GF + + +I + A A
Sbjct: 328 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKK---GFPPNVIVYNNLIDSFIEAGSLNKA 384
Query: 70 EGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDI 129
+ + M + +T T+ +GY + + +A R+ +M Q S+ +VI +
Sbjct: 385 IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICL 444
Query: 130 LVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKE------------------- 170
L A+ F EM + P L LI LCK+ +
Sbjct: 445 LCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVD 504
Query: 171 ---------------TIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFN 215
+D A +I E+ RGC D +Y TLI+G C + EA +
Sbjct: 505 TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLD 564
Query: 216 EMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGG 275
EM ++G P TY+ LI G+ + + EAI+ ++ K+NG+ P+V+TYS ++DG CK
Sbjct: 565 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 624
Query: 276 HSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYG 335
+ + E + M++K+ +PN V Y LI C+ G+ S A+E+ + M+ +G+ PN+ Y
Sbjct: 625 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 684
Query: 336 KIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQL 395
+I G S ++A +EM + G+ P +V + ++ G + L
Sbjct: 685 SLIKGMSIISRVEEAKLLFEEMRMEGLEP-------NVFHYTALIDGYGKLGQMVKVECL 737
Query: 396 YLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPD 442
M ++ + T+ +I + + G++ +A+R+L EM G VPD
Sbjct: 738 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPD 784
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 188/377 (49%), Gaps = 15/377 (3%)
Query: 86 DILLTI-CRGYGR--VHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAF 142
D+L+ + C + R + LD V F K T LT LV N ++
Sbjct: 192 DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTS---LVRANEFQKCCEA 248
Query: 143 YREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLC 202
+ + K G+ P V I A CK + ++ A+++F +M G P+ T+ T+I+GL
Sbjct: 249 FDVVCK-GVSPDVYLFTTAINAFCKGGK-VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLG 306
Query: 203 RMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVF 262
G EA +M E+G P+++TY+ L+ G+ ++ +G+A +L+EM K G PNV
Sbjct: 307 MCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVI 366
Query: 263 TYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRM 322
Y+ L+D + G +A+E+ ++MV+K TY TLI G CK G+ A +L M
Sbjct: 367 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM 426
Query: 323 RLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQG 382
G N G + +I C+ + A F+ EM+L +SP + T++ G
Sbjct: 427 LSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLT-------TLISG 479
Query: 383 LCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPD 442
LC + +A +L+ +G ++ T + L+ C+ G L++A RI +E++ GCV D
Sbjct: 480 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 539
Query: 443 KGIWDVVMGGLWDRKKV 459
+ ++ ++ G +KK+
Sbjct: 540 RVSYNTLISGCCGKKKL 556
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/317 (32%), Positives = 163/317 (51%), Gaps = 7/317 (2%)
Query: 43 SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCV---VTEDILLTICRGYGRVH 99
+ GF D T ++ L A + A + + + CV V+ + L++ C G ++
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 557
Query: 100 RPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLN 159
+A +M LK +Y +I L N V+ AI F+ + ++ G+ P V + +
Sbjct: 558 ---EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 160 ILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEE 219
++I CK + T + + F EM ++ QP++ Y LI CR G +S A EL +M+
Sbjct: 615 VMIDGCCKAERT-EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673
Query: 220 KGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQ 279
KG SP+ TYTSLI GM + EA L EEM+ G+EPNVF Y+ L+DG K G ++
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 733
Query: 280 AMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIIS 339
LL M +K+ PN +TY +I G ++G +EA +L+ MR +G+ P++ Y + I
Sbjct: 734 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIY 793
Query: 340 GFCAASSYQDAANFIDE 356
G+ +A DE
Sbjct: 794 GYLKQGGVLEAFKGSDE 810
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/474 (24%), Positives = 201/474 (42%), Gaps = 35/474 (7%)
Query: 9 WPKQITSS-LVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFR 67
+P + T + L+ L++A + K FD G D F I+ +
Sbjct: 223 FPSKTTCNILLTSLVRA-NEFQKCCEAFDVVC----KGVSPDVYLFTTAINAFCKGGKVE 277
Query: 68 SAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVI 127
A L +M++ T+ G G R +A KM + ++ T +Y ++
Sbjct: 278 EAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILV 337
Query: 128 DILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGC 187
L + A +EM K G PP+V+ N LI + + +++ A++I M ++G
Sbjct: 338 KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE-AGSLNKAIEIKDLMVSKGL 396
Query: 188 QPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIR 247
S TY TLI G C+ G A+ L EM GF+ + ++TS+I +C A+R
Sbjct: 397 SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALR 456
Query: 248 LLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLC 307
+ EM + P +TL+ GLCK G +A+EL + K + T L++GLC
Sbjct: 457 FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC 516
Query: 308 KEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRA 367
+ GK EA I + +G + Y +ISG C +A F+DEMV G+ P
Sbjct: 517 EAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNY 576
Query: 368 TWSL----------------------------HVRMHNTVVQGLCSNVDSPRAFQLYLSM 399
T+S+ V ++ ++ G C + + + M
Sbjct: 577 TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEM 636
Query: 400 RTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
++ + ++ LI+ +C+ G L+ A + E+M G P+ + ++ G+
Sbjct: 637 MSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 206/482 (42%), Gaps = 82/482 (17%)
Query: 17 LVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERM 76
L++ L +A K ++ A + DS G + T +M+ RL + + A + E M
Sbjct: 383 LIDMLCRAGK-LDTAFELRDSMQKA---GLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM 438
Query: 77 KQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVI--------- 127
+ C E ++ G G+V R DA +V+ KM D + Y ++I
Sbjct: 439 DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRK 498
Query: 128 --------------------------DILVEENHVKRAIAFYREMRKMGIPPSVVSLNIL 161
D + + ++ A + E++ P S +IL
Sbjct: 499 EDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSIL 558
Query: 162 IKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKG 221
I L K + ++F+ M +GC D+ Y +I+G C+ G V++A +L EM+ KG
Sbjct: 559 IHGLIK-AGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG 617
Query: 222 FSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAM 281
F P+VVTY S+I G+ + D L EA L EE K IE NV YS+L+DG K G +A
Sbjct: 618 FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAY 677
Query: 282 ELLEMMVTKHNRPNM-----------------------------------VTYGTLINGL 306
+LE ++ K PN+ VTYG LINGL
Sbjct: 678 LILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGL 737
Query: 307 CKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSR 366
CK KF++A M+ QG+KP+ Y +ISG A + +A D G P
Sbjct: 738 CKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDS 797
Query: 367 ATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNK 426
A + N +++GL + + AF L+ R RG+ I T L+ K L +
Sbjct: 798 ACY-------NAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQ 850
Query: 427 AA 428
AA
Sbjct: 851 AA 852
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/488 (24%), Positives = 223/488 (45%), Gaps = 55/488 (11%)
Query: 10 PKQIT-SSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRS 68
P ++T +S++ L KA + +++AV MF+ + + T MI +A +F
Sbjct: 271 PDEVTYTSMIGVLCKANR-LDEAVEMFEHLEKNRRVPCTYAYNT---MIMGYGSAGKFDE 326
Query: 69 AEGLLERMKQENC---VVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLT 125
A LLER + + V+ + +LT R G+V +A++VF +M+ +Y
Sbjct: 327 AYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVD---EALKVFEEMKK-DAAPNLSTYNI 382
Query: 126 VIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR 185
+ID+L + A M+K G+ P+V ++NI++ LCK+++ +D A +F EM +
Sbjct: 383 LIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQK-LDEACAMFEEMDYK 441
Query: 186 GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEA 245
C PD T+ +LI+GL ++G V +A +++ +M + + + YTSLI +
Sbjct: 442 VCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDG 501
Query: 246 IRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING 305
++ ++M P++ +T MD + K G + + E + + P+ +Y LI+G
Sbjct: 502 HKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHG 561
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPS 365
L K G +E E+ M+ QG + Y +I GFC A ++EM G P+
Sbjct: 562 LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPT 621
Query: 366 RATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLN 425
T+ +V+ GL A+ L+ +++ I + + + LI F K G ++
Sbjct: 622 VVTYG-------SVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRID 674
Query: 426 KAARILEEMISDG-----------------------------------CVPDKGIWDVVM 450
+A ILEE++ G C P++ + +++
Sbjct: 675 EAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILI 734
Query: 451 GGLWDRKK 458
GL +K
Sbjct: 735 NGLCKVRK 742
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 194/430 (45%), Gaps = 11/430 (2%)
Query: 26 KDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTE 85
KD+N+A+ F E H ++ ++ + F + + +L M +
Sbjct: 76 KDVNRAIEYF--RWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSV 133
Query: 86 DILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYRE 145
+ + + G + ++ + V M F+ + +Y T+I NH + +++
Sbjct: 134 NTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQ 193
Query: 146 MRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMG 205
M+++G P+V LI+ K +DSAL + EM + D Y I+ ++G
Sbjct: 194 MQELGYEPTVHLFTTLIRGFAKEGR-VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVG 252
Query: 206 SVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYS 265
V A + F+E+E G P VTYTS+I +C+++ L EA+ + E ++KN P + Y+
Sbjct: 253 KVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYN 312
Query: 266 TLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQ 325
T++ G G +A LLE K + P+++ Y ++ L K GK EA+++ + M+ +
Sbjct: 313 TMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-K 371
Query: 326 GLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCS 385
PN Y +I C A A D M G+ P +VR N +V LC
Sbjct: 372 DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFP-------NVRTVNIMVDRLCK 424
Query: 386 NVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGI 445
+ A ++ M + + + TF LI K G ++ A ++ E+M+ C + +
Sbjct: 425 SQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIV 484
Query: 446 WDVVMGGLWD 455
+ ++ ++
Sbjct: 485 YTSLIKNFFN 494
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 118/474 (24%), Positives = 206/474 (43%), Gaps = 46/474 (9%)
Query: 16 SLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLER 75
S LI A +N + +M G+ F +I + SA LL+
Sbjct: 169 SAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDE 228
Query: 76 MKQENCVVTEDILLTIC-RGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEEN 134
MK + + + +L +C +G+V + A + FH++E LK + +Y ++I +L + N
Sbjct: 229 MKSSS-LDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKAN 287
Query: 135 HVKRAIAFYREM-----------------------------------RKMGIPPSVVSLN 159
+ A+ + + R G PSV++ N
Sbjct: 288 RLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYN 347
Query: 160 ILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEE 219
++ L K + +D AL++F EM + P+ TY LI+ LCR G + A EL + M++
Sbjct: 348 CILTCLRKMGK-VDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQK 405
Query: 220 KGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQ 279
G P+V T ++ +C+S L EA + EEM P+ T+ +L+DGL K G
Sbjct: 406 AGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDD 465
Query: 280 AMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIIS 339
A ++ E M+ R N + Y +LI G+ + +I M Q P+ L +
Sbjct: 466 AYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMD 525
Query: 340 GFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSM 399
A + +E+ P ++S+ ++ GL + ++L+ SM
Sbjct: 526 CMFKAGEPEKGRAMFEEIKARRFVPDARSYSI-------LIHGLIKAGFANETYELFYSM 578
Query: 400 RTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
+ +G ++ ++ +I FCK G +NKA ++LEEM + G P + V+ GL
Sbjct: 579 KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 178/359 (49%), Gaps = 8/359 (2%)
Query: 95 YGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPS 154
+ R R A+ V KM + + ++ +++ N + A + M K G P+
Sbjct: 116 FCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPN 175
Query: 155 VVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELF 214
VV N LI LCKN E ++ AL++ +EM +G D TY TL+ GLC G S+A +
Sbjct: 176 VVVYNTLIDGLCKNGE-LNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 215 NEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKG 274
+M ++ +P VVT+T+LI + NL EA L +EM ++ ++PN TY+++++GLC
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH 294
Query: 275 GHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLY 334
G A + ++M +K PN+VTY TLI+G CK E +++ RM +G + Y
Sbjct: 295 GRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTY 354
Query: 335 GKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQ 394
+I G+C + A + MV ++P T H ++ GLC N + A
Sbjct: 355 NTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIIT-------HCILLHGLCVNGEIESALV 407
Query: 395 LYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
+ MR I I ++ +I CK + KA + + +G PD + +++ GL
Sbjct: 408 KFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGL 466
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 159/326 (48%), Gaps = 8/326 (2%)
Query: 109 HKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKN 168
KME + + S+ +I + + A++ +M K+G PS+V+ L+ C
Sbjct: 95 QKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLV 154
Query: 169 KETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVT 228
I A + M G +P+ Y TLI+GLC+ G ++ A EL NEME+KG VVT
Sbjct: 155 NR-IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVT 213
Query: 229 YTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMV 288
Y +L+ G+C S +A R+L +M K I P+V T++ L+D K G+ +A EL + M+
Sbjct: 214 YNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMI 273
Query: 289 TKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQ 348
PN VTY ++INGLC G+ +A + D M +G PN Y +ISGFC
Sbjct: 274 QSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVD 333
Query: 349 DAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEI 408
+ M G + T+ NT++ G C A ++ M +R ++ +I
Sbjct: 334 EGMKLFQRMSCEGFNADIFTY-------NTLIHGYCQVGKLRVALDIFCWMVSRRVTPDI 386
Query: 409 DTFDCLIKCFCKRGDLNKAARILEEM 434
T L+ C G++ A ++M
Sbjct: 387 ITHCILLHGLCVNGEIESALVKFDDM 412
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 166/351 (47%), Gaps = 8/351 (2%)
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
DA +F +M Q + + ++ + I F ++M GI + S ILI
Sbjct: 54 DAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI 113
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF 222
C+ + AL + +M G +P T+G+L++G C + + +A L M + G+
Sbjct: 114 HCFCRCSR-LSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 223 SPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAME 282
P+VV Y +LI G+C++ L A+ LL EM+K G+ +V TY+TL+ GLC G A
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 283 LLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFC 342
+L M+ + P++VT+ LI+ K+G EA E+ M + PN Y II+G C
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 343 AASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTR 402
DA D M G P+ T+ NT++ G C +L+ M
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTY-------NTLISGFCKFRMVDEGMKLFQRMSCE 345
Query: 403 GISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
G + +I T++ LI +C+ G L A I M+S PD +++ GL
Sbjct: 346 GFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGL 396
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 165/325 (50%), Gaps = 14/325 (4%)
Query: 139 AIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLI 198
A A + EM PS+V L+ A N ++ + +M G D Y++ LI
Sbjct: 55 AFALFFEMVHSQPLPSIVDFTRLLTA-TANLRRYETVIYFSQKMELYGISHDLYSFTILI 113
Query: 199 NGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIE 258
+ CR +S A + +M + G+ PS+VT+ SL+HG C + +G+A L+ M K+G E
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE 173
Query: 259 PNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEI 318
PNV Y+TL+DGLCK G A+ELL M K ++VTY TL+ GLC G++S+A +
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233
Query: 319 LDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNT 378
L M + + P+ + +I F + +A EM+ + P+ T+ N+
Sbjct: 234 LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY-------NS 286
Query: 379 VVQGLCSN---VDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMI 435
++ GLC + D+ + F L M ++G + T++ LI FCK +++ ++ + M
Sbjct: 287 IINGLCMHGRLYDAKKTFDL---MASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343
Query: 436 SDGCVPDKGIWDVVMGGLWDRKKVR 460
+G D ++ ++ G K+R
Sbjct: 344 CEGFNADIFTYNTLIHGYCQVGKLR 368
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 162/338 (47%), Gaps = 7/338 (2%)
Query: 44 NGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENC---VVTEDILLTICRGYGRVHR 100
+G+ + + +I L + A LL M+++ VVT + LLT G R
Sbjct: 170 SGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLT---GLCYSGR 226
Query: 101 PLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNI 160
DA R+ M + ++ +ID+ V++ ++ A Y+EM + + P+ V+ N
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286
Query: 161 LIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
+I LC + D A + F M ++GC P+ TY TLI+G C+ V E +LF M +
Sbjct: 287 IINGLCMHGRLYD-AKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE 345
Query: 221 GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQA 280
GF+ + TY +LIHG CQ L A+ + M + P++ T+ L+ GLC G A
Sbjct: 346 GFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESA 405
Query: 281 MELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISG 340
+ + M +V Y +I+GLCK K +A E+ R+ ++G+KP+A Y +I G
Sbjct: 406 LVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILG 465
Query: 341 FCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNT 378
C ++A I M GI H+ H++
Sbjct: 466 LCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEHSS 503
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 146/316 (46%), Gaps = 22/316 (6%)
Query: 138 RAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTL 197
RA + YRE + G S+ + A +F EM + P + L
Sbjct: 33 RAFSDYREKLRTGFLHSI---------------RFEDAFALFFEMVHSQPLPSIVDFTRL 77
Query: 198 INGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGI 257
+ + +ME G S + ++T LIH C+ L A+ +L +M K G
Sbjct: 78 LTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGY 137
Query: 258 EPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVE 317
EP++ T+ +L+ G C A L+ +MV PN+V Y TLI+GLCK G+ + A+E
Sbjct: 138 EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALE 197
Query: 318 ILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHN 377
+L+ M +GL + Y +++G C + + DAA + +M+ I+P T++ + +
Sbjct: 198 LLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVF- 256
Query: 378 TVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISD 437
V QG N+D + +LY M + T++ +I C G L A + + M S
Sbjct: 257 -VKQG---NLDEAQ--ELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASK 310
Query: 438 GCVPDKGIWDVVMGGL 453
GC P+ ++ ++ G
Sbjct: 311 GCFPNVVTYNTLISGF 326
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 174/356 (48%), Gaps = 8/356 (2%)
Query: 104 AIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIK 163
I +F +E + S+ T+ID + A++ +M K+G PS+V+ L+
Sbjct: 98 VISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVN 157
Query: 164 ALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFS 223
C + A+ + ++ G +P+ Y T+I+ LC G V+ A ++ M++ G
Sbjct: 158 GFCHVNRFYE-AMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIR 216
Query: 224 PSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMEL 283
P VVTY SLI + S G + R+L +M + GI P+V T+S L+D K G L+A +
Sbjct: 217 PDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQ 276
Query: 284 LEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCA 343
M+ + PN+VTY +LINGLC G EA ++L+ + +G PNA Y +I+G+C
Sbjct: 277 YNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCK 336
Query: 344 ASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRG 403
A D + M G+ T+ NT+ QG C A ++ M + G
Sbjct: 337 AKRVDDGMKILCVMSRDGVDGDTFTY-------NTLYQGYCQAGKFSAAEKVLGRMVSCG 389
Query: 404 ISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
+ ++ TF+ L+ C G + KA LE++ V +++++ GL KV
Sbjct: 390 VHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKV 445
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 175/331 (52%), Gaps = 13/331 (3%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERM----KQENCVVTEDILLTICRGYGRVHR 100
GF TFG +++ N+F A L++++ + N V+ I+ ++C G+V+
Sbjct: 144 GFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEK-GQVNT 202
Query: 101 PLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNI 160
LD ++ KM ++ +Y ++I L + +M +MGI P V++ +
Sbjct: 203 ALDVLKHMKKM---GIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSA 259
Query: 161 LIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
LI K + +++ Q ++EM R P+ TY +LINGLC G + EAK++ N + K
Sbjct: 260 LIDVYGKEGQLLEAKKQ-YNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSK 318
Query: 221 GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQA 280
GF P+ VTY +LI+G C++ + + +++L M ++G++ + FTY+TL G C+ G A
Sbjct: 319 GFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAA 378
Query: 281 MELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGL--YGKII 338
++L MV+ P+M T+ L++GLC GK +A+ L+ LQ K G+ Y II
Sbjct: 379 EKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLE--DLQKSKTVVGIITYNIII 436
Query: 339 SGFCAASSYQDAANFIDEMVLGGISPSRATW 369
G C A +DA + L G+SP T+
Sbjct: 437 KGLCKADKVEDAWYLFCSLALKGVSPDVITY 467
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 197/403 (48%), Gaps = 15/403 (3%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQ---ENCVVTEDILLTICRGYGRVHRP 101
G HD +F +I + A L +M + E +VT L+ G+ V+R
Sbjct: 109 GISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVN---GFCHVNRF 165
Query: 102 LDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNIL 161
+A+ + ++ + Y T+ID L E+ V A+ + M+KMGI P VV+ N L
Sbjct: 166 YEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSL 225
Query: 162 IKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKG 221
I L + T + +I +M G PD T+ LI+ + G + EAK+ +NEM ++
Sbjct: 226 ITRLF-HSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRS 284
Query: 222 FSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAM 281
+P++VTY SLI+G+C L EA ++L + G PN TY+TL++G CK M
Sbjct: 285 VNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGM 344
Query: 282 ELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGF 341
++L +M + TY TL G C+ GKFS A ++L RM G+ P+ + ++ G
Sbjct: 345 KILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGL 404
Query: 342 CAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRT 401
C A ++++ ++ + + +N +++GLC A+ L+ S+
Sbjct: 405 CDHGKIGKALVRLEDL-------QKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLAL 457
Query: 402 RGISIEIDTFDCLIKCFCKRGDLNKAARILEEMIS-DGCVPDK 443
+G+S ++ T+ ++ ++ +A + +M DG +P K
Sbjct: 458 KGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMPIK 500
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 174/357 (48%), Gaps = 8/357 (2%)
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
DA+ +F M + + + ++ + + N + I+ +R + +GI + S LI
Sbjct: 62 DALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLI 121
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF 222
C+ + AL +M G +P T+G+L+NG C + EA L +++ G+
Sbjct: 122 DCFCRCAR-LSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180
Query: 223 SPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAME 282
P+VV Y ++I +C+ + A+ +L+ MKK GI P+V TY++L+ L G +
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSAR 240
Query: 283 LLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFC 342
+L M+ P+++T+ LI+ KEG+ EA + + M + + PN Y +I+G C
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300
Query: 343 AASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTR 402
+A ++ +V G P+ T+ NT++ G C ++ M
Sbjct: 301 IHGLLDEAKKVLNVLVSKGFFPNAVTY-------NTLINGYCKAKRVDDGMKILCVMSRD 353
Query: 403 GISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
G+ + T++ L + +C+ G + A ++L M+S G PD +++++ GL D K+
Sbjct: 354 GVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKI 410
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 146/287 (50%), Gaps = 7/287 (2%)
Query: 173 DSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSL 232
+ AL +F +M P + L+ + ++ LF +E G S + ++T+L
Sbjct: 61 NDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTL 120
Query: 233 IHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHN 292
I C+ L A+ L +M K G EP++ T+ +L++G C +AM L++ +V
Sbjct: 121 IDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180
Query: 293 RPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAAN 352
PN+V Y T+I+ LC++G+ + A+++L M+ G++P+ Y +I+ + ++ +A
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSAR 240
Query: 353 FIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFD 412
+ +M+ GISP T+S + ++ Q L A + Y M R ++ I T++
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLL-------EAKKQYNEMIQRSVNPNIVTYN 293
Query: 413 CLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
LI C G L++A ++L ++S G P+ ++ ++ G K+V
Sbjct: 294 SLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRV 340
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/485 (26%), Positives = 215/485 (44%), Gaps = 51/485 (10%)
Query: 10 PKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSA 69
P ++V ++++ + +NKA ++++ +G TF M+ A
Sbjct: 201 PSVRNCNIVLKVLRDSRMMNKASAVYETMI---EHGIMPTVITFNTMLDSCFKAGDLERV 257
Query: 70 EGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDI 129
+ + MK+ N +E + G+ + + +A R M T S+ +I+
Sbjct: 258 DKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEG 317
Query: 130 LVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQP 189
++ A EM GI P+ + NI I ALC + ID A ++ M P
Sbjct: 318 YCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALC-DFGRIDDARELLSSM----AAP 372
Query: 190 DSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLL 249
D +Y TL++G +MG EA LF+++ PS+VTY +LI G+C+S NL A RL
Sbjct: 373 DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLK 432
Query: 250 EEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL------------------------- 284
EEM I P+V TY+TL+ G K G+ A E+
Sbjct: 433 EEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRL 492
Query: 285 -----------EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGL 333
EM+ T H+ P++ Y I+GLCK G +A+E ++ GL P+
Sbjct: 493 GDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVT 552
Query: 334 YGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAF 393
Y +I G+ ++ A N DEM+ + PS T+ + ++ G +AF
Sbjct: 553 YTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFV-------LIYGHAKAGRLEQAF 605
Query: 394 QLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
Q M+ RG+ + T + L+ CK G++++A R L +M +G P+K + +++
Sbjct: 606 QYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKN 665
Query: 454 WDRKK 458
D +K
Sbjct: 666 CDFEK 670
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 162/375 (43%), Gaps = 45/375 (12%)
Query: 34 MFDSA---TAEYSN-GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILL 89
+FD A T E N G +T+ + I L + A LL M + V
Sbjct: 323 LFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYN---- 378
Query: 90 TICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKM 149
T+ GY ++ + ++A +F + + + +Y T+ID L E +++ A EM
Sbjct: 379 TLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQ 438
Query: 150 GIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTL------------ 197
I P V++ L+K KN + A +++ EM +G +PD Y Y T
Sbjct: 439 LIFPDVITYTTLVKGFVKNG-NLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDK 497
Query: 198 ------------------------INGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLI 233
I+GLC++G++ +A E ++ G P VTYT++I
Sbjct: 498 AFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVI 557
Query: 234 HGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNR 293
G ++ A L +EM + + P+V TY L+ G K G QA + M + R
Sbjct: 558 RGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVR 617
Query: 294 PNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANF 353
PN++T+ L+ G+CK G EA L +M +G+ PN Y +IS C +++
Sbjct: 618 PNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKL 677
Query: 354 IDEMVLGGISPSRAT 368
EM+ I P T
Sbjct: 678 YKEMLDKEIEPDGYT 692
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 116/264 (43%), Gaps = 24/264 (9%)
Query: 214 FNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCK 273
F +M KGF PSV ++ + S + +A + E M ++GI P V T++T++D K
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 274 GGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGL 333
G + ++ M ++ + VTY LING K GK EA MR G
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 334 YGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLH--------------------- 372
+ +I G+C + DA DEM+ GI P+ +T++++
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 370
Query: 373 ---VRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAAR 429
V +NT++ G A L+ +R I I T++ LI C+ G+L A R
Sbjct: 371 APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQR 430
Query: 430 ILEEMISDGCVPDKGIWDVVMGGL 453
+ EEM + PD + ++ G
Sbjct: 431 LKEEMTTQLIFPDVITYTTLVKGF 454
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 112/202 (55%), Gaps = 2/202 (0%)
Query: 123 YLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEM 182
Y ID L + ++ +AI F R++ ++G+ P V+ +I+ +N + A ++ EM
Sbjct: 518 YNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQ-FKMARNLYDEM 576
Query: 183 PNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNL 242
+ P TY LI G + G + +A + EM+++G P+V+T+ +L++GMC++ N+
Sbjct: 577 LRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNI 636
Query: 243 GEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTL 302
EA R L +M++ GI PN ++Y+ L+ C + ++L + M+ K P+ T+ L
Sbjct: 637 DEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRAL 696
Query: 303 INGLCKEGKFSEAVEILDRMRL 324
L K+ + S VE L+R+ L
Sbjct: 697 FKHLEKDHE-SREVEFLERLLL 717
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 131/309 (42%), Gaps = 46/309 (14%)
Query: 169 KETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSV-- 226
K + L F +M +G P ++ L +++A ++ M E G P+V
Sbjct: 181 KSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVIT 240
Query: 227 ---------------------------------VTYTSLIHGMCQSDNLGEAIRLLEEMK 253
VTY LI+G ++ + EA R +M+
Sbjct: 241 FNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMR 300
Query: 254 KNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFS 313
++G ++++ L++G CK G A + + M+ P TY I LC G+
Sbjct: 301 RSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRID 360
Query: 314 EAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHV 373
+A E+L M P+ Y ++ G+ + +A+ D++ G I PS T+
Sbjct: 361 DARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTY---- 412
Query: 374 RMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEE 433
NT++ GLC + + A +L M T+ I ++ T+ L+K F K G+L+ A + +E
Sbjct: 413 ---NTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDE 469
Query: 434 MISDGCVPD 442
M+ G PD
Sbjct: 470 MLRKGIKPD 478
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 87/167 (52%), Gaps = 2/167 (1%)
Query: 122 SYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHE 181
+Y TVI +E K A Y EM + + PSV++ +LI K ++ A Q E
Sbjct: 552 TYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGR-LEQAFQYSTE 610
Query: 182 MPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDN 241
M RG +P+ T+ L+ G+C+ G++ EA +MEE+G P+ +YT LI C +
Sbjct: 611 MKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEK 670
Query: 242 LGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMV 288
E ++L +EM IEP+ +T+ L L K H + +E LE ++
Sbjct: 671 WEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK-DHESREVEFLERLL 716
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 72/157 (45%), Gaps = 1/157 (0%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
G DH T+ +I + QF+ A L + M ++ + + G+ + R A
Sbjct: 545 GLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQA 604
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
+ +M+ ++ ++ ++ + + ++ A + +M + GIPP+ S +LI
Sbjct: 605 FQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISK 664
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGL 201
C + E + ++++ EM ++ +PD YT+ L L
Sbjct: 665 NC-DFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHL 700
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 216/456 (47%), Gaps = 20/456 (4%)
Query: 10 PKQ-ITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRS 68
P Q I+ + V Q ++ K + FD + + GF H +F +M+ L A
Sbjct: 62 PSQTISRTTVLQTLRLIKVPADGLRFFDWVS---NKGFSHKEQSFFLMLEFLGRARNLNV 118
Query: 69 AEGLLERMKQEN--CVVTEDILL-TICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLT 125
A L +++ + CV +D ++ R YG +++++F M+ + + ++ +
Sbjct: 119 ARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNS 178
Query: 126 VIDILVEENHVKRAIAFYREMRKM-GIPPSVVSLNILIKALCKNKETIDSALQIFHEMPN 184
++ IL++ A + EMR+ G+ P + N LI CKN +D A +IF +M
Sbjct: 179 LLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKN-SMVDEAFRIFKDMEL 237
Query: 185 RGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKG--FSPSVVTYTSLIHGMCQSDNL 242
C PD TY T+I+GLCR G V A + + M +K P+VV+YT+L+ G C +
Sbjct: 238 YHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEI 297
Query: 243 GEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNR-----PNMV 297
EA+ + +M G++PN TY+TL+ GL + + E+ ++++ ++ P+
Sbjct: 298 DEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAH---RYDEIKDILIGGNDAFTTFAPDAC 354
Query: 298 TYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEM 357
T+ LI C G A+++ M L P++ Y +I C + + A +E+
Sbjct: 355 TFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNEL 414
Query: 358 VLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKC 417
+ + +N + + LC+N + +A +++ + RG+ + ++ LI
Sbjct: 415 FEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITG 473
Query: 418 FCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
C+ G A +L M+ VPD +++++ GL
Sbjct: 474 HCREGKFKPAYELLVLMLRREFVPDLETYELLIDGL 509
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 191/421 (45%), Gaps = 22/421 (5%)
Query: 40 AEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVH 99
A+ +N R + ++R V +N + + ++ +L R +
Sbjct: 23 AKVTNEERSTKSKLARSLARAVNSNPWSDELESSLSSLHPSQTISRTTVLQTLR---LIK 79
Query: 100 RPLDAIRVFHKMEDFQLKFTQKSYLTVIDIL--VEENHVKRAIAFYREMRKMG-IPPSVV 156
P D +R F + + ++S+ +++ L +V R F E R G +
Sbjct: 80 VPADGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDR 139
Query: 157 SLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNE 216
N LI++ N ++++F M G P T+ +L++ L + G A +LF+E
Sbjct: 140 YFNSLIRSY-GNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDE 198
Query: 217 MEEK-GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGG 275
M G +P T+ +LI+G C++ + EA R+ ++M+ P+V TY+T++DGLC+ G
Sbjct: 199 MRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAG 258
Query: 276 HSLQAMELLEMMVTKHN--RPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGL 333
A +L M+ K PN+V+Y TL+ G C + + EAV + M +GLKPNA
Sbjct: 259 KVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVT 318
Query: 334 YGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAF 393
Y +I G A Y + I ++++GG + + T++ N +++ C A
Sbjct: 319 YNTLIKGLSEAHRYDE----IKDILIGG-NDAFTTFAPDACTFNILIKAHCDAGHLDAAM 373
Query: 394 QLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMIS-------DGCVPDKGIW 446
+++ M + + ++ LI+ C R + ++A + E+ D C P +
Sbjct: 374 KVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAY 433
Query: 447 D 447
+
Sbjct: 434 N 434
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 140/285 (49%), Gaps = 15/285 (5%)
Query: 181 EMPNRGCQP--DSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQ 238
E + GC D Y + +LI G E+ +LF M++ G SPSV+T+ SL+ + +
Sbjct: 127 ERRSNGCVKLQDRY-FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLK 185
Query: 239 SDNLGEAIRLLEEMKKN-GIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMV 297
G A L +EM++ G+ P+ +T++TL++G CK +A + + M H P++V
Sbjct: 186 RGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVV 245
Query: 298 TYGTLINGLCKEGKFSEAVEILDRM--RLQGLKPNAGLYGKIISGFCAASSYQDAANFID 355
TY T+I+GLC+ GK A +L M + + PN Y ++ G+C +A
Sbjct: 246 TYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFH 305
Query: 356 EMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEID--TFDC 413
+M+ G+ P+ T+ NT+++GL + + + D TF+
Sbjct: 306 DMLSRGLKPNAVTY-------NTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNI 358
Query: 414 LIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKK 458
LIK C G L+ A ++ +EM++ PD + V++ L R +
Sbjct: 359 LIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNE 403
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 185/433 (42%), Gaps = 52/433 (12%)
Query: 49 DHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDIL--LTICRGYGRVHRPLDAIR 106
D T+ +I L A + + A +L M ++ V +++ T+ RGY +A+
Sbjct: 243 DVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVL 302
Query: 107 VFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGI---------PPSVVS 157
VFH M LK +Y T+I L E + Y E++ + I P +
Sbjct: 303 VFHDMLSRGLKPNAVTYNTLIKGLSEAHR-------YDEIKDILIGGNDAFTTFAPDACT 355
Query: 158 LNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEM 217
NILIKA C + +D+A+++F EM N PDS +Y LI LC A+ LFNE+
Sbjct: 356 FNILIKAHC-DAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNEL 414
Query: 218 EEKGF-------SPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDG 270
EK P Y + +C + +A ++ ++ K G++ + +Y TL+ G
Sbjct: 415 FEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITG 473
Query: 271 LCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPN 330
C+ G A ELL +M+ + P++ TY LI+GL K G+ A + L RM P
Sbjct: 474 HCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPV 533
Query: 331 AGLYGKIIS----------GFCAAS--------SYQDAANFIDEMVLGGISPSRATWSLH 372
A + +++ FC + D + + ++ +A +
Sbjct: 534 ATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVR 593
Query: 373 VRMHN-------TVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLN 425
+ N ++ LC N A L L + ++IDT + +I+ CK +
Sbjct: 594 LLYDNGYLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHS 653
Query: 426 KAARILEEMISDG 438
+A + E++ G
Sbjct: 654 EAFSLYNELVELG 666
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Query: 334 YGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAF 393
+ +I + A +Q++ M GISPS T+ N+++ L + A
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTF-------NSLLSILLKRGRTGMAH 193
Query: 394 QLYLSMR-TRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGG 452
L+ MR T G++ + TF+ LI FCK +++A RI ++M C PD ++ ++ G
Sbjct: 194 DLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDG 253
Query: 453 LWDRKKVR 460
L KV+
Sbjct: 254 LCRAGKVK 261
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 213/442 (48%), Gaps = 16/442 (3%)
Query: 14 TSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLL 73
+SLV K ++ KA+ +F+ E G D F VM+ + A
Sbjct: 348 ATSLVNGYCKG-NELGKALDLFNRMEEE---GLAPDKVMFSVMVEWFCKNMEMEKAIEFY 403
Query: 74 ERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILV-E 132
RMK + ++ T+ +G + P A+ +F+ + F+ I +L +
Sbjct: 404 MRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFN--DSFESWIAHGFMCNKIFLLFCK 461
Query: 133 ENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSY 192
+ V A +F + M + GI P+VV N ++ A C+ K +D A IF EM +G +P+++
Sbjct: 462 QGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMK-NMDLARSIFSEMLEKGLEPNNF 520
Query: 193 TYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEM 252
TY LI+G + A ++ N+M F + V Y ++I+G+C+ +A +L+ +
Sbjct: 521 TYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNL 580
Query: 253 -KKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGK 311
K+ + +Y++++DG K G + A+E M PN+VT+ +LING CK +
Sbjct: 581 IKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNR 640
Query: 312 FSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSL 371
A+E+ M+ LK + YG +I GFC + + A E+ G+ P
Sbjct: 641 MDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMP------- 693
Query: 372 HVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARIL 431
+V ++N+++ G + A LY M GIS ++ T+ +I K G++N A+ +
Sbjct: 694 NVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLY 753
Query: 432 EEMISDGCVPDKGIWDVVMGGL 453
E++ G VPD+ + V++ GL
Sbjct: 754 SELLDLGIVPDEILHMVLVNGL 775
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 187/379 (49%), Gaps = 26/379 (6%)
Query: 90 TICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKM 149
++ GY + + A+ +F++ME+ L + + +++ + +++AI FY M+ +
Sbjct: 350 SLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSV 409
Query: 150 GIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSY----TYGTLINGL---- 201
I PS V ++ +I+ C E+ ++AL+IF+ DS+ +G + N +
Sbjct: 410 RIAPSSVLVHTMIQG-CLKAESPEAALEIFN---------DSFESWIAHGFMCNKIFLLF 459
Query: 202 CRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNV 261
C+ G V A ME+KG P+VV Y +++ C+ N+ A + EM + G+EPN
Sbjct: 460 CKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNN 519
Query: 262 FTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDR 321
FTYS L+DG K A +++ M + N V Y T+INGLCK G+ S+A E+L
Sbjct: 520 FTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQN 579
Query: 322 M-RLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVV 380
+ + + + Y II GF A EM G SP+ T++ +++
Sbjct: 580 LIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFT-------SLI 632
Query: 381 QGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCV 440
G C + A ++ M++ + +++ + LI FCK+ D+ A + E+ G +
Sbjct: 633 NGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLM 692
Query: 441 PDKGIWDVVMGGLWDRKKV 459
P+ +++ ++ G + K+
Sbjct: 693 PNVSVYNSLISGFRNLGKM 711
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 177/355 (49%), Gaps = 4/355 (1%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
G ++ T+ ++I ++A ++ +M N E I TI G +V + A
Sbjct: 514 GLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKA 573
Query: 105 IRVFHKM-EDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIK 163
+ + ++ + + SY ++ID V+ A+ YREM + G P+VV+ LI
Sbjct: 574 KEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLIN 633
Query: 164 ALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFS 223
CK+ +D AL++ HEM + + D YG LI+G C+ + A LF+E+ E G
Sbjct: 634 GFCKSNR-MDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLM 692
Query: 224 PSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMEL 283
P+V Y SLI G + AI L ++M +GI ++FTY+T++DGL K G+ A +L
Sbjct: 693 PNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDL 752
Query: 284 LEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCA 343
++ P+ + + L+NGL K+G+F +A ++L+ M+ + + PN LY +I+G
Sbjct: 753 YSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHR 812
Query: 344 ASSYQDAANFIDEMVLGGISPSRATWSLHV--RMHNTVVQGLCSNVDSPRAFQLY 396
+ +A DEM+ GI ++L V R+ S++ SP Y
Sbjct: 813 EGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRVEKPPAASKISSLASPEMRSSY 867
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 155/333 (46%), Gaps = 10/333 (3%)
Query: 126 VIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR 185
V+ LV N + A Y +M +G+ V+ +L++A + ++ + A++IF + +R
Sbjct: 210 VLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKP-EEAVKIFRRVMSR 268
Query: 186 GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK-GFSPSVVTYTSLIHGMCQSDNLGE 244
G +PD + + C+ + A +L EM K G S TYTS+I + N+ E
Sbjct: 269 GAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEE 328
Query: 245 AIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLIN 304
A+R+++EM GI +V ++L++G CKG +A++L M + P+ V + ++
Sbjct: 329 AVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVE 388
Query: 305 GLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISP 364
CK + +A+E RM+ + P++ L +I G A S + A ++
Sbjct: 389 WFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFND-------- 440
Query: 365 SRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDL 424
S +W H M N + C A M +GI + ++ ++ C+ ++
Sbjct: 441 SFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNM 500
Query: 425 NKAARILEEMISDGCVPDKGIWDVVMGGLWDRK 457
+ A I EM+ G P+ + +++ G + K
Sbjct: 501 DLARSIFSEMLEKGLEPNNFTYSILIDGFFKNK 533
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 162/387 (41%), Gaps = 65/387 (16%)
Query: 131 VEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR-GCQP 189
+ E + A+ +R + G P + ++ ++A CK + + AL + EM + G
Sbjct: 250 LRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLV-MALDLLREMRGKLGVPA 308
Query: 190 DSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLL 249
TY ++I + G++ EA + +EM G SV+ TSL++G C+ + LG+A+ L
Sbjct: 309 SQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLF 368
Query: 250 EEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING---- 305
M++ G+ P+ +S +++ CK +A+E M + P+ V T+I G
Sbjct: 369 NRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKA 428
Query: 306 ------------------------------LCKEGKFSEAVEILDRMRLQGLKPNAGLYG 335
CK+GK A L M +G++PN Y
Sbjct: 429 ESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYN 488
Query: 336 KIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVR--------------------- 374
++ C + A + EM+ G+ P+ T+S+ +
Sbjct: 489 NMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNAS 548
Query: 375 -------MHNTVVQGLCSNVDSPRAFQLYLSM-RTRGISIEIDTFDCLIKCFCKRGDLNK 426
++NT++ GLC + +A ++ ++ + + S+ +++ +I F K GD +
Sbjct: 549 NFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDS 608
Query: 427 AARILEEMISDGCVPDKGIWDVVMGGL 453
A EM +G P+ + ++ G
Sbjct: 609 AVETYREMSENGKSPNVVTFTSLINGF 635
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 148/339 (43%), Gaps = 43/339 (12%)
Query: 147 RKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGS 206
++ G + + N L+ A +NK +D A+ F M +R P +++ L R
Sbjct: 161 KRFGFELTPRAFNYLLNAYIRNKR-MDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNL 219
Query: 207 VSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYST 266
+ EAKE++N+M G + VT L+ + EA+++ + G EP+ +S
Sbjct: 220 IDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSL 279
Query: 267 LMDGLCKGGHSLQAMELLEMMVTKHNRP-NMVTYGTLINGLCKEGKFSEAVEILDRMRLQ 325
+ CK + A++LL M K P + TY ++I KEG EAV ++D M
Sbjct: 280 AVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGF 339
Query: 326 GLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCS 385
G+ + +++G+C + A + + M G++P + +S+ +V+ C
Sbjct: 340 GIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSV-------MVEWFCK 392
Query: 386 NVDSPRAFQLYLSMRTRGI----------------------SIEI--DTFDCLIK----- 416
N++ +A + Y+ M++ I ++EI D+F+ I
Sbjct: 393 NMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMC 452
Query: 417 -----CFCKRGDLNKAARILEEMISDGCVPDKGIWDVVM 450
FCK+G ++ A L+ M G P+ ++ +M
Sbjct: 453 NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMM 491
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 194/401 (48%), Gaps = 17/401 (4%)
Query: 47 RHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGY---GRVHRPLD 103
RH T+ ++ L A A + E MK + +L + + G++H
Sbjct: 100 RHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATA 159
Query: 104 AIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIK 163
+ ++ F+++ ++++ LV+ + V+ A+ + E + + NILI+
Sbjct: 160 LL-----LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIR 214
Query: 164 ALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF- 222
LC + + AL++ M GC+PD TY TLI G C+ +++A E+F +++
Sbjct: 215 GLCGVGKA-EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVC 273
Query: 223 SPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAME 282
SP VVTYTS+I G C++ + EA LL++M + GI P T++ L+DG K G L A E
Sbjct: 274 SPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEE 333
Query: 283 LLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFC 342
+ M++ P++VT+ +LI+G C+ G+ S+ + + M +G+ PNA Y +I+ C
Sbjct: 334 IRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALC 393
Query: 343 AASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTR 402
+ A + ++ I P M+N V+ G C A + M +
Sbjct: 394 NENRLLKARELLGQLASKDIIPQPF-------MYNPVIDGFCKAGKVNEANVIVEEMEKK 446
Query: 403 GISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDK 443
+ TF LI C +G + +A I +M++ GC PDK
Sbjct: 447 KCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDK 487
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 184/395 (46%), Gaps = 19/395 (4%)
Query: 43 SNGFRHDHTTFGVMISRLVAANQFRSAEGLL-ERMKQENCVVTEDILLTICRGYGRVHRP 101
S+G ++ G ++S + A LL + + E C + + LL RV
Sbjct: 131 SDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVE-- 188
Query: 102 LDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNIL 161
DA+++F + FQ K++ +I L ++A+ M G P +V+ N L
Sbjct: 189 -DAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTL 247
Query: 162 IKALCKNKETIDSALQIFHEMPNRG-CQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
I+ CK+ E ++ A ++F ++ + C PD TY ++I+G C+ G + EA L ++M
Sbjct: 248 IQGFCKSNE-LNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 306
Query: 221 GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQA 280
G P+ VT+ L+ G ++ + A + +M G P+V T+++L+DG C+ G Q
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQG 366
Query: 281 MELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISG 340
L E M + PN TY LIN LC E + +A E+L ++ + + P +Y +I G
Sbjct: 367 FRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDG 426
Query: 341 FCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMR 400
FC A +A ++EM P + T+++ ++ G C A ++ M
Sbjct: 427 FCKAGKVNEANVIVEEMEKKKCKPDKITFTI-------LIIGHCMKGRMFEAVSIFHKMV 479
Query: 401 TRGISIEIDTFDCLIKCFCKRG------DLNKAAR 429
G S + T L+ C K G LN+ AR
Sbjct: 480 AIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIAR 514
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 150/346 (43%), Gaps = 42/346 (12%)
Query: 148 KMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYG------------ 195
K+ I S + N+L ++LCK D A Q+F M + G P++ G
Sbjct: 96 KLNIRHSFWTYNLLTRSLCK-AGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKL 154
Query: 196 ---------------------TLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIH 234
+L+N L ++ V +A +LF+E T+ LI
Sbjct: 155 HFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIR 214
Query: 235 GMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKH-NR 293
G+C +A+ LL M G EP++ TY+TL+ G CK +A E+ + + +
Sbjct: 215 GLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCS 274
Query: 294 PNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANF 353
P++VTY ++I+G CK GK EA +LD M G+ P + ++ G+ A A
Sbjct: 275 PDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
Query: 354 IDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDC 413
+M+ G P T++ +++ G C + F+L+ M RG+ T+
Sbjct: 335 RGKMISFGCFPDVVTFT-------SLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSI 387
Query: 414 LIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
LI C L KA +L ++ S +P +++ V+ G KV
Sbjct: 388 LINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKV 433
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 2/222 (0%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
G + TF V++ A + +AE + +M C ++ GY RV +
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQG 366
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
R++ +M + +Y +I+ L EN + +A ++ I P N +I
Sbjct: 367 FRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDG 426
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
CK + ++ A I EM + C+PD T+ LI G C G + EA +F++M G SP
Sbjct: 427 FCKAGK-VNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSP 485
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYST 266
+T +SL+ + ++ EA L ++ + G NV T
Sbjct: 486 DKITVSSLLSCLLKAGMAKEAYH-LNQIARKGQSNNVVPLET 526
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 12/209 (5%)
Query: 254 KNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFS 313
K I + +TY+ L LCK G A ++ E M + PN G L++ ++GK
Sbjct: 96 KLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLH 155
Query: 314 EAVEIL-DRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLH 372
A +L ++G + +++ +DA DE + R
Sbjct: 156 FATALLLQSFEVEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHL-------RFQSCND 205
Query: 373 VRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILE 432
+ N +++GLC + +A +L M G +I T++ LI+ FCK +LNKA+ + +
Sbjct: 206 TKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFK 265
Query: 433 EMISDG-CVPDKGIWDVVMGGLWDRKKVR 460
++ S C PD + ++ G K+R
Sbjct: 266 DVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 194/401 (48%), Gaps = 17/401 (4%)
Query: 47 RHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGY---GRVHRPLD 103
RH T+ ++ L A A + E MK + +L + + G++H
Sbjct: 100 RHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATA 159
Query: 104 AIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIK 163
+ ++ F+++ ++++ LV+ + V+ A+ + E + + NILI+
Sbjct: 160 LL-----LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIR 214
Query: 164 ALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF- 222
LC + + AL++ M GC+PD TY TLI G C+ +++A E+F +++
Sbjct: 215 GLCGVGKA-EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVC 273
Query: 223 SPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAME 282
SP VVTYTS+I G C++ + EA LL++M + GI P T++ L+DG K G L A E
Sbjct: 274 SPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEE 333
Query: 283 LLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFC 342
+ M++ P++VT+ +LI+G C+ G+ S+ + + M +G+ PNA Y +I+ C
Sbjct: 334 IRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALC 393
Query: 343 AASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTR 402
+ A + ++ I P M+N V+ G C A + M +
Sbjct: 394 NENRLLKARELLGQLASKDIIPQPF-------MYNPVIDGFCKAGKVNEANVIVEEMEKK 446
Query: 403 GISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDK 443
+ TF LI C +G + +A I +M++ GC PDK
Sbjct: 447 KCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDK 487
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 184/395 (46%), Gaps = 19/395 (4%)
Query: 43 SNGFRHDHTTFGVMISRLVAANQFRSAEGLL-ERMKQENCVVTEDILLTICRGYGRVHRP 101
S+G ++ G ++S + A LL + + E C + + LL RV
Sbjct: 131 SDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVE-- 188
Query: 102 LDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNIL 161
DA+++F + FQ K++ +I L ++A+ M G P +V+ N L
Sbjct: 189 -DAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTL 247
Query: 162 IKALCKNKETIDSALQIFHEMPNRG-CQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
I+ CK+ E ++ A ++F ++ + C PD TY ++I+G C+ G + EA L ++M
Sbjct: 248 IQGFCKSNE-LNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 306
Query: 221 GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQA 280
G P+ VT+ L+ G ++ + A + +M G P+V T+++L+DG C+ G Q
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQG 366
Query: 281 MELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISG 340
L E M + PN TY LIN LC E + +A E+L ++ + + P +Y +I G
Sbjct: 367 FRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDG 426
Query: 341 FCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMR 400
FC A +A ++EM P + T+++ ++ G C A ++ M
Sbjct: 427 FCKAGKVNEANVIVEEMEKKKCKPDKITFTI-------LIIGHCMKGRMFEAVSIFHKMV 479
Query: 401 TRGISIEIDTFDCLIKCFCKRG------DLNKAAR 429
G S + T L+ C K G LN+ AR
Sbjct: 480 AIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIAR 514
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 150/346 (43%), Gaps = 42/346 (12%)
Query: 148 KMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYG------------ 195
K+ I S + N+L ++LCK D A Q+F M + G P++ G
Sbjct: 96 KLNIRHSFWTYNLLTRSLCK-AGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKL 154
Query: 196 ---------------------TLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIH 234
+L+N L ++ V +A +LF+E T+ LI
Sbjct: 155 HFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIR 214
Query: 235 GMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKH-NR 293
G+C +A+ LL M G EP++ TY+TL+ G CK +A E+ + + +
Sbjct: 215 GLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCS 274
Query: 294 PNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANF 353
P++VTY ++I+G CK GK EA +LD M G+ P + ++ G+ A A
Sbjct: 275 PDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
Query: 354 IDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDC 413
+M+ G P T++ +++ G C + F+L+ M RG+ T+
Sbjct: 335 RGKMISFGCFPDVVTFT-------SLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSI 387
Query: 414 LIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
LI C L KA +L ++ S +P +++ V+ G KV
Sbjct: 388 LINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKV 433
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 2/222 (0%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
G + TF V++ A + +AE + +M C ++ GY RV +
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQG 366
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
R++ +M + +Y +I+ L EN + +A ++ I P N +I
Sbjct: 367 FRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDG 426
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
CK + ++ A I EM + C+PD T+ LI G C G + EA +F++M G SP
Sbjct: 427 FCKAGK-VNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSP 485
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYST 266
+T +SL+ + ++ EA L ++ + G NV T
Sbjct: 486 DKITVSSLLSCLLKAGMAKEAYH-LNQIARKGQSNNVVPLET 526
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 12/209 (5%)
Query: 254 KNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFS 313
K I + +TY+ L LCK G A ++ E M + PN G L++ ++GK
Sbjct: 96 KLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLH 155
Query: 314 EAVEIL-DRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLH 372
A +L ++G + +++ +DA DE + R
Sbjct: 156 FATALLLQSFEVEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHL-------RFQSCND 205
Query: 373 VRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILE 432
+ N +++GLC + +A +L M G +I T++ LI+ FCK +LNKA+ + +
Sbjct: 206 TKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFK 265
Query: 433 EMISDG-CVPDKGIWDVVMGGLWDRKKVR 460
++ S C PD + ++ G K+R
Sbjct: 266 DVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 169/320 (52%), Gaps = 8/320 (2%)
Query: 134 NHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYT 193
N +K A+ +M KMGI VV ILI LCKN+ + AL++ M +RG P+ T
Sbjct: 27 NSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVV-PALEVLKRMKDRGISPNVVT 85
Query: 194 YGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMK 253
Y +LI GLC+ G +++A+ +EM+ K +P+V+T+++LI + L + + + M
Sbjct: 86 YSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMI 145
Query: 254 KNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFS 313
+ I+PNVFTYS+L+ GLC +A+++L++M++K PN+VTY TL NG K +
Sbjct: 146 QMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVD 205
Query: 314 EAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHV 373
+ +++LD M +G+ N +I G+ A A M G+ P ++
Sbjct: 206 DGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIP-------NI 258
Query: 374 RMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEE 433
R +N V+ GL +N + +A + M+ ++I T+ +I CK + +A + +
Sbjct: 259 RSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYK 318
Query: 434 MISDGCVPDKGIWDVVMGGL 453
+ PD + +++ L
Sbjct: 319 LKFKRVEPDFKAYTIMIAEL 338
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 148/290 (51%), Gaps = 8/290 (2%)
Query: 145 EMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRM 204
+M K+GI P +V+ + L+ C + +I A+ + +M G + D LI+ LC+
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLS-NSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKN 61
Query: 205 GSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTY 264
V A E+ M+++G SP+VVTY+SLI G+C+S L +A R L EM I PNV T+
Sbjct: 62 RLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITF 121
Query: 265 STLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRL 324
S L+D K G + + +MM+ PN+ TY +LI GLC + EA+++LD M
Sbjct: 122 SALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMIS 181
Query: 325 QGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLC 384
+G PN Y + +GF +S D +D+M G++ + + NT+++G
Sbjct: 182 KGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSC-------NTLIKGYF 234
Query: 385 SNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEM 434
A ++ M + G+ I +++ ++ G++ KA E M
Sbjct: 235 QAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHM 284
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 139/279 (49%), Gaps = 7/279 (2%)
Query: 181 EMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSD 240
+M G +PD T +L+NG C S+ +A + +ME+ G VV T LI +C++
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 241 NLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYG 300
+ A+ +L+ MK GI PNV TYS+L+ GLCK G A L M +K PN++T+
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 301 TLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLG 360
LI+ K GK S+ + M + PN Y +I G C + +A +D M+
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 361 GISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCK 420
G +P+ T+S T+ G + +L M RG++ + + LIK + +
Sbjct: 183 GCTPNVVTYS-------TLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQ 235
Query: 421 RGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
G ++ A + M S+G +P+ +++V+ GL+ +V
Sbjct: 236 AGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEV 274
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 156/326 (47%), Gaps = 14/326 (4%)
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
DA+ V +ME +K +ID L + V A+ + M+ GI P+VV+ + LI
Sbjct: 31 DAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLI 90
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF 222
LCK+ D+ ++ HEM ++ P+ T+ LI+ + G +S+ ++ M +
Sbjct: 91 TGLCKSGRLADAERRL-HEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSI 149
Query: 223 SPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAME 282
P+V TY+SLI+G+C + + EAI++L+ M G PNV TYSTL +G K ++
Sbjct: 150 DPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIK 209
Query: 283 LLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFC 342
LL+ M + N V+ TLI G + GK A+ + M GL PN Y +++G
Sbjct: 210 LLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLF 269
Query: 343 AASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTR 402
A + A + + M + L + + ++ G+C A+ L+ ++ +
Sbjct: 270 ANGEVEKALSRFEHM-------QKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFK 322
Query: 403 GISIEIDTFDCLIKCFCKRGDLNKAA 428
+ + + +I +LN+A
Sbjct: 323 RVEPDFKAYTIMI------AELNRAG 342
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 150/298 (50%), Gaps = 7/298 (2%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENC---VVTEDILLTICRGYGRVHRP 101
G + D ++I L A +L+RMK VVT L+T G + R
Sbjct: 43 GIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLIT---GLCKSGRL 99
Query: 102 LDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNIL 161
DA R H+M+ ++ ++ +ID + + + + Y+ M +M I P+V + + L
Sbjct: 100 ADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSL 159
Query: 162 IKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKG 221
I LC + +D A+++ M ++GC P+ TY TL NG + V + +L ++M ++G
Sbjct: 160 IYGLCMHNR-VDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRG 218
Query: 222 FSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAM 281
+ + V+ +LI G Q+ + A+ + M NG+ PN+ +Y+ ++ GL G +A+
Sbjct: 219 VAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKAL 278
Query: 282 ELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIIS 339
E M N +++TY +I+G+CK EA ++ +++ + ++P+ Y +I+
Sbjct: 279 SRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIA 336
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/442 (27%), Positives = 205/442 (46%), Gaps = 31/442 (7%)
Query: 44 NGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLD 103
+G D TF +++ L A F A L+ M+ + + T+ G RVHR D
Sbjct: 357 DGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDD 416
Query: 104 AIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIK 163
A+ +F ME +K T +Y+ ID + A+ + +M+ GI P++V+ N +
Sbjct: 417 ALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLY 476
Query: 164 ALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFS 223
+L K + A QIF+ + + G PDS TY ++ ++G + EA +L +EM E G
Sbjct: 477 SLAKAGRDRE-AKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCE 535
Query: 224 PSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMEL 283
P V+ SLI+ + ++D + EA ++ MK+ ++P V TY+TL+ GL K G +A+EL
Sbjct: 536 PDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIEL 595
Query: 284 LEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCA 343
E MV K PN +T+ TL + LCK + + A+++L +M G P+ Y II G
Sbjct: 596 FEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVK 655
Query: 344 ASSYQDAANFIDEM---------VLGGISPSRATWSLHVRMHNTVVQGLCSNVDSP---- 390
++A F +M L + P SL + + L + D P
Sbjct: 656 NGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLF 715
Query: 391 ---------------RAFQLYLSMRTRGISIEIDTFDC-LIKCFCKRGDLNKAARILEEM 434
A + GI + D+ +I+ CK +++ A + E+
Sbjct: 716 WEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKF 775
Query: 435 ISD-GCVPDKGIWDVVMGGLWD 455
D G P +++++GGL +
Sbjct: 776 TKDLGVQPKLPTYNLLIGGLLE 797
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/446 (26%), Positives = 200/446 (44%), Gaps = 33/446 (7%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDIL-LTIC-RGYGRVHRPL 102
GFR T+ ++ L S GLL+ M E + ++ TIC R GR +
Sbjct: 218 GFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM--ETLGLKPNVYTFTICIRVLGRAGKIN 275
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
+A + +M+D +Y +ID L + A + +M+ P V+ L+
Sbjct: 276 EAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLL 335
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF 222
N++ +DS Q + EM G PD T+ L++ LC+ G+ EA + + M ++G
Sbjct: 336 DRFSDNRD-LDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGI 394
Query: 223 SPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAME 282
P++ TY +LI G+ + L +A+ L M+ G++P +TY +D K G S+ A+E
Sbjct: 395 LPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALE 454
Query: 283 LLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFC 342
E M TK PN+V + L K G+ EA +I ++ GL P++ Y ++ +
Sbjct: 455 TFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYS 514
Query: 343 AASSYQDAANFIDEMVLGGISPS-----------------RATWSLHVRM---------- 375
+A + EM+ G P W + +RM
Sbjct: 515 KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 574
Query: 376 -HNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEM 434
+NT++ GL N A +L+ M +G TF+ L C CK ++ A ++L +M
Sbjct: 575 TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634
Query: 435 ISDGCVPDKGIWDVVMGGLWDRKKVR 460
+ GCVPD ++ ++ GL +V+
Sbjct: 635 MDMGCVPDVFTYNTIIFGLVKNGQVK 660
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 203/419 (48%), Gaps = 20/419 (4%)
Query: 47 RHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPL---- 102
+ D T+ + L + A L +M++ V L G +H L
Sbjct: 150 KRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFV------LNAYSYNGLIHLLLKSRF 203
Query: 103 --DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNI 160
+A+ V+ +M + + ++Y +++ L + + + +EM +G+ P+V + I
Sbjct: 204 CTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTI 263
Query: 161 LIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
I+ L + + I+ A +I M + GC PD TY LI+ LC + AKE+F +M+
Sbjct: 264 CIRVLGRAGK-INEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTG 322
Query: 221 GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQA 280
P VTY +L+ + +L + EM+K+G P+V T++ L+D LCK G+ +A
Sbjct: 323 RHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEA 382
Query: 281 MELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISG 340
+ L++M + PN+ TY TLI GL + + +A+E+ M G+KP A Y I
Sbjct: 383 FDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDY 442
Query: 341 FCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMR 400
+ + A ++M GI+P ++ N + L A Q++ ++
Sbjct: 443 YGKSGDSVSALETFEKMKTKGIAP-------NIVACNASLYSLAKAGRDREAKQIFYGLK 495
Query: 401 TRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
G+ + T++ ++KC+ K G++++A ++L EM+ +GC PD + + ++ L+ +V
Sbjct: 496 DIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRV 554
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 115/479 (24%), Positives = 209/479 (43%), Gaps = 50/479 (10%)
Query: 13 ITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGL 72
+ +SL+ L KA++ +++A MF + T+ +++ L + + A L
Sbjct: 540 VVNSLINTLYKADR-VDEAWKMFMRMK---EMKLKPTVVTYNTLLAGLGKNGKIQEAIEL 595
Query: 73 LERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVE 132
E M Q+ C T+ + A+++ KM D +Y T+I LV+
Sbjct: 596 FEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVK 655
Query: 133 ENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSY 192
VK A+ F+ +M+K+ + P V+L L+ + K D+ I + + N QP +
Sbjct: 656 NGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANL 714
Query: 193 TYGTLI---------------------NGLCRMG---------------SVSEAKELFNE 216
+ LI NG+CR G +VS A+ LF +
Sbjct: 715 FWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEK 774
Query: 217 M-EEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGG 275
++ G P + TY LI G+ ++D + A + ++K G P+V TY+ L+D K G
Sbjct: 775 FTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSG 834
Query: 276 HSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEIL-DRMRLQGLKPNAGLY 334
+ EL + M T N +T+ +I+GL K G +A+++ D M + P A Y
Sbjct: 835 KIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTY 894
Query: 335 GKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQ 394
G +I G + +A + M+ G P+ A ++N ++ G ++ A
Sbjct: 895 GPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCA-------IYNILINGFGKAGEADAACA 947
Query: 395 LYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
L+ M G+ ++ T+ L+ C C G +++ +E+ G PD +++++ GL
Sbjct: 948 LFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGL 1006
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 144/295 (48%), Gaps = 10/295 (3%)
Query: 122 SYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHE 181
+Y ++D + + Y+EM + ++ NI+I L K +D AL ++++
Sbjct: 822 TYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVK-AGNVDDALDLYYD 880
Query: 182 -MPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSD 240
M +R P + TYG LI+GL + G + EAK+LF M + G P+ Y LI+G ++
Sbjct: 881 LMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAG 940
Query: 241 NLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYG 300
A L + M K G+ P++ TYS L+D LC G + + + + P++V Y
Sbjct: 941 EADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYN 1000
Query: 301 TLINGLCKEGKFSEAVEILDRMRL-QGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVL 359
+INGL K + EA+ + + M+ +G+ P+ Y +I A ++A +E+
Sbjct: 1001 LIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQR 1060
Query: 360 GGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCL 414
G+ P+ T+ N +++G + A+ +Y +M T G S T++ L
Sbjct: 1061 AGLEPNVFTF-------NALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/442 (25%), Positives = 195/442 (44%), Gaps = 45/442 (10%)
Query: 49 DHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDI--LLTICRGYGRVHRPLDAIR 106
D T+ +I LV Q + A +MK+ +V D L T+ G + DA +
Sbjct: 642 DVFTYNTIIFGLVKNGQVKEAMCFFHQMKK---LVYPDFVTLCTLLPGVVKASLIEDAYK 698
Query: 107 VFHKMEDFQLKFTQKS----YLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNI-L 161
+ + +F + + +I ++ E + A++F + GI S+ + +
Sbjct: 699 I---ITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPI 755
Query: 162 IKALCKNKETIDSALQIFHEMP-NRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
I+ CK+ + A +F + + G QP TY LI GL + A+++F +++
Sbjct: 756 IRYSCKHN-NVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKST 814
Query: 221 GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQA 280
G P V TY L+ +S + E L +EM + E N T++ ++ GL K G+ A
Sbjct: 815 GCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDA 874
Query: 281 MEL-LEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIIS 339
++L ++M + P TYG LI+GL K G+ EA ++ + M G +PN +Y +I+
Sbjct: 875 LDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILIN 934
Query: 340 GFCAASSYQDAANFIDEMVLGGISPSRATWS---------------LH------------ 372
GF A A MV G+ P T+S LH
Sbjct: 935 GFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNP 994
Query: 373 -VRMHNTVVQGLCSNVDSPRAFQLYLSMRT-RGISIEIDTFDCLIKCFCKRGDLNKAARI 430
V +N ++ GL + A L+ M+T RGI+ ++ T++ LI G + +A +I
Sbjct: 995 DVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKI 1054
Query: 431 LEEMISDGCVPDKGIWDVVMGG 452
E+ G P+ ++ ++ G
Sbjct: 1055 YNEIQRAGLEPNVFTFNALIRG 1076
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 125/276 (45%), Gaps = 7/276 (2%)
Query: 178 IFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMC 237
+F M R + D+ TY T+ L G + +A +M E GF + +Y LIH +
Sbjct: 140 VFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLL 199
Query: 238 QSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMV 297
+S EA+ + M G P++ TYS+LM GL K M LL+ M T +PN+
Sbjct: 200 KSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVY 259
Query: 298 TYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEM 357
T+ I L + GK +EA EIL RM +G P+ Y +I C A A ++M
Sbjct: 260 TFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKM 319
Query: 358 VLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKC 417
G P R T+ T++ N D Q + M G ++ TF L+
Sbjct: 320 KTGRHKPDRVTYI-------TLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDA 372
Query: 418 FCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
CK G+ +A L+ M G +P+ ++ ++ GL
Sbjct: 373 LCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGL 408
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 121/255 (47%), Gaps = 3/255 (1%)
Query: 52 TFGVMISRLVAANQFRSAEGLL-ERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHK 110
T ++IS LV A A L + M + T + G + R +A ++F
Sbjct: 857 THNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEG 916
Query: 111 MEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKE 170
M D+ + Y +I+ + A A ++ M K G+ P + + ++L+ LC
Sbjct: 917 MLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR 976
Query: 171 TIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEME-EKGFSPSVVTY 229
+D L F E+ G PD Y +INGL + + EA LFNEM+ +G +P + TY
Sbjct: 977 -VDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTY 1035
Query: 230 TSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVT 289
SLI + + + EA ++ E+++ G+EPNVFT++ L+ G G A + + MVT
Sbjct: 1036 NSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVT 1095
Query: 290 KHNRPNMVTYGTLIN 304
PN TY L N
Sbjct: 1096 GGFSPNTGTYEQLPN 1110
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 109/223 (48%), Gaps = 2/223 (0%)
Query: 46 FRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAI 105
F T+G +I L + + A+ L E M C I + G+G+ A
Sbjct: 887 FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAAC 946
Query: 106 RVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKAL 165
+F +M ++ K+Y ++D L V + +++E+++ G+ P VV N++I L
Sbjct: 947 ALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGL 1006
Query: 166 CKNKETIDSALQIFHEM-PNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
K+ ++ AL +F+EM +RG PD YTY +LI L G V EA +++NE++ G P
Sbjct: 1007 GKSHR-LEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEP 1065
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTL 267
+V T+ +LI G S A + + M G PN TY L
Sbjct: 1066 NVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 7/197 (3%)
Query: 263 TYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRM 322
T + +++ L G + + ++M + + + TY T+ L +G +A L +M
Sbjct: 120 TCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKM 179
Query: 323 RLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQG 382
R G NA Y +I + +A M+L G PS T+S +++ G
Sbjct: 180 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYS-------SLMVG 232
Query: 383 LCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPD 442
L D L M T G+ + TF I+ + G +N+A IL+ M +GC PD
Sbjct: 233 LGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPD 292
Query: 443 KGIWDVVMGGLWDRKKV 459
+ V++ L +K+
Sbjct: 293 VVTYTVLIDALCTARKL 309
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 202/429 (47%), Gaps = 9/429 (2%)
Query: 26 KDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTE 85
+D+ V +FD ++E + F + + L F E +L ++ EN +T
Sbjct: 75 QDVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTH 134
Query: 86 DILLTICRGYGRVHRPLDAIRVF-HKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYR 144
+ L + Y A+ ++ + +E + + +++ +LV+ + A Y
Sbjct: 135 EALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYD 194
Query: 145 EMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRM 204
EM G S IL+K +C N+ ++ ++ +GC P+ Y T+I G C++
Sbjct: 195 EMCDRGDSVDNYSTCILVKGMC-NEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKL 253
Query: 205 GSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTY 264
G + A +F E++ KGF P++ T+ ++I+G C+ + + RLL E+K+ G+ +V+
Sbjct: 254 GDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFL 313
Query: 265 STLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRL 324
+ ++D + G+ + E + ++ +P++ TY LIN LCKEGK AV LD
Sbjct: 314 NNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASK 373
Query: 325 QGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLC 384
+GL PN Y +I +C + Y A+ + +M G P T+ + +H VV G
Sbjct: 374 KGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYG--ILIHGLVVSGHM 431
Query: 385 SNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKG 444
+ A + + + RG+S + ++ L+ CK G A + EM+ +PD
Sbjct: 432 DD-----AVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAY 486
Query: 445 IWDVVMGGL 453
++ ++ G
Sbjct: 487 VYATLIDGF 495
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 193/426 (45%), Gaps = 23/426 (5%)
Query: 43 SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPL 102
+N + D T+ ++I+RL + A G L+ ++ + + + Y +
Sbjct: 338 ANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYD 397
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
A ++ +M + K +Y +I LV H+ A+ ++ G+ P N+L+
Sbjct: 398 IASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLM 457
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF 222
LCK + + L +F EM +R PD+Y Y TLI+G R G EA+++F+ EKG
Sbjct: 458 SGLCKTGRFLPAKL-LFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGV 516
Query: 223 SPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAME 282
VV + ++I G C+S L EA+ + M + + P+ FTYST++DG K A++
Sbjct: 517 KVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIK 576
Query: 283 LLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFC 342
+ M +PN+VTY +LING C +G F A E M+L+ L PN Y +I
Sbjct: 577 IFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLA 636
Query: 343 AASS-YQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLC-------------SNVD 388
SS + A + + M+ P+ T+ N ++QG SN
Sbjct: 637 KESSTLEKAVYYWELMMTNKCVPNEVTF-------NCLLQGFVKKTSGKVLAEPDGSNHG 689
Query: 389 SPRAF-QLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWD 447
F + + M++ G S ++ + C C G + A ++M+ G PD +
Sbjct: 690 QSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFA 749
Query: 448 VVMGGL 453
++ G
Sbjct: 750 AILHGF 755
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 144/358 (40%), Gaps = 51/358 (14%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
G + D T+G++I LV + A + ++ I + G + R L A
Sbjct: 410 GCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPA 469
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
+F +M D + Y T+ID + A + + G+ VV N +IK
Sbjct: 470 KLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKG 529
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
C++ +D AL + M PD +TY T+I+G + ++ A ++F ME+ P
Sbjct: 530 FCRSG-MLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKP 588
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQ-AMEL 283
+VVTYTSLI+G C + A +EM+ + PNV TY+TL+ L K +L+ A+
Sbjct: 589 NVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYY 648
Query: 284 LEMMVTKHNRPNMVTYGTLING-------------------------------------- 305
E+M+T PN VT+ L+ G
Sbjct: 649 WELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSD 708
Query: 306 -----------LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAAN 352
LC G A D+M +G P+ + I+ GFC + + N
Sbjct: 709 HAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRN 766
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 123/317 (38%), Gaps = 69/317 (21%)
Query: 35 FDSATAEYS----NGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLT 90
FD A +S G + D MI + A + RM +E+ V + T
Sbjct: 501 FDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYST 560
Query: 91 ICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMG 150
I GY + AI++F ME + K +Y ++I+ + K A ++EM+
Sbjct: 561 IIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRD 620
Query: 151 IPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLING---------- 200
+ P+VV+ LI++L K T++ A+ + M C P+ T+ L+ G
Sbjct: 621 LVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVL 680
Query: 201 ---------------------------------------LCRMGSVSEAKELFNEMEEKG 221
LC G V A ++M +KG
Sbjct: 681 AEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKG 740
Query: 222 FSPSVVTYTSLIHGMCQSD-----------NLGE-----AIRLLEEMKKNGIEPNVFTYS 265
FSP V++ +++HG C NLGE A+R + ++++ +P + S
Sbjct: 741 FSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKGLEVAVRYSQVLEQHLPQPVICEAS 800
Query: 266 TLMDGLCKGGHSLQAME 282
T++ + + + + +E
Sbjct: 801 TILHAMVEKADTKEPVE 817
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 187/374 (50%), Gaps = 14/374 (3%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCV---VTEDILLTICRGYGRVHRP 101
G + + T+ +I+ V F EG+L+ MK++ V VT +L+ + G++
Sbjct: 254 GIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMS-- 311
Query: 102 LDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNIL 161
DA ++F +M + ++ Y ++I + ++KRA + E+ + G+ PS + L
Sbjct: 312 -DAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGAL 370
Query: 162 IKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKG 221
I +CK E + +A + +EM ++G + TLI+G CR G V EA +++ ME+KG
Sbjct: 371 IDGVCKVGE-MGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKG 429
Query: 222 FSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAM 281
F V T ++ + EA + L M + G++ + +Y+ L+D CK G+ +A
Sbjct: 430 FQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAK 489
Query: 282 ELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGF 341
L M +K +PN +TY +I CK+GK EA ++ M G+ P++ Y +I G
Sbjct: 490 RLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGE 549
Query: 342 CAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRT 401
C A + +A EM L G+ + T+++ ++ GL S AF LY M+
Sbjct: 550 CIADNVDEAMRLFSEMGLKGLDQNSVTYTV-------MISGLSKAGKSDEAFGLYDEMKR 602
Query: 402 RGISIEIDTFDCLI 415
+G +I+ + LI
Sbjct: 603 KGYTIDNKVYTALI 616
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 180/385 (46%), Gaps = 43/385 (11%)
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
+ +RVF M L ++S + + + + + +R M G+ +V SL I++
Sbjct: 172 EGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVV 231
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRM------------------ 204
+ LC+ E ++ + ++ E +G +P++YTY T+IN +
Sbjct: 232 EGLCRRGE-VEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGV 290
Query: 205 -----------------GSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIR 247
G +S+A++LF+EM E+G V YTSLI C+ N+ A
Sbjct: 291 VYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFL 350
Query: 248 LLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLC 307
L +E+ + G+ P+ +TY L+DG+CK G A L+ M +K V + TLI+G C
Sbjct: 351 LFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYC 410
Query: 308 KEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRA 367
++G EA I D M +G + + I S F Y +A ++ M+ GG+ S
Sbjct: 411 RKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTV 470
Query: 368 TWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKA 427
+++ ++ C + A +L++ M ++G+ T++ +I +CK+G + +A
Sbjct: 471 SYT-------NLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEA 523
Query: 428 ARILEEMISDGCVPDKGIWDVVMGG 452
++ M ++G PD + ++ G
Sbjct: 524 RKLRANMEANGMDPDSYTYTSLIHG 548
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 140/283 (49%), Gaps = 10/283 (3%)
Query: 27 DINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTED 86
++ +A L+FD T + G T+G +I + + +AE L+ M+ + +T+
Sbjct: 344 NMKRAFLLFDELTEK---GLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQV 400
Query: 87 ILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKR---AIAFY 143
+ T+ GY R +A ++ ME K Q T I N +KR A +
Sbjct: 401 VFNTLIDGYCRKGMVDEASMIYDVMEQ---KGFQADVFTCNTIASCFNRLKRYDEAKQWL 457
Query: 144 REMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCR 203
M + G+ S VS LI CK + ++ A ++F EM ++G QP++ TY +I C+
Sbjct: 458 FRMMEGGVKLSTVSYTNLIDVYCK-EGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCK 516
Query: 204 MGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFT 263
G + EA++L ME G P TYTSLIHG C +DN+ EA+RL EM G++ N T
Sbjct: 517 QGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVT 576
Query: 264 YSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGL 306
Y+ ++ GL K G S +A L + M K + Y LI +
Sbjct: 577 YTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 97/210 (46%), Gaps = 7/210 (3%)
Query: 244 EAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLI 303
E +R+ + M K G+ + + + K +E+ MV + + + ++
Sbjct: 172 EGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVV 231
Query: 304 NGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGIS 363
GLC+ G+ ++ +++ ++G+KP A Y II+ + + + M G+
Sbjct: 232 EGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVV 291
Query: 364 PSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGD 423
++ T++L + + +V G S+ + +L+ MR RGI ++ + LI C++G+
Sbjct: 292 YNKVTYTLLMEL--SVKNGKMSDAE-----KLFDEMRERGIESDVHVYTSLISWNCRKGN 344
Query: 424 LNKAARILEEMISDGCVPDKGIWDVVMGGL 453
+ +A + +E+ G P + ++ G+
Sbjct: 345 MKRAFLLFDELTEKGLSPSSYTYGALIDGV 374
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 192/425 (45%), Gaps = 48/425 (11%)
Query: 12 QITSSLVEQLIKAEKDINKAVLMFDS-ATAEYSNGFRHDHTTFGVMISRLVAANQFRSAE 70
+++ +L+E+++K K N VL AE GF+H + + +I L QF+
Sbjct: 91 KLSPALIEEVLK--KLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIW 148
Query: 71 GLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDIL 130
L++ MK + + E L I R Y R + +AI FHKME+F K + ++D L
Sbjct: 149 SLVDDMKAKKLLSKETFAL-ISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTL 207
Query: 131 VEENHVKRAIAFY-----------------------------------REMRKMGIPPSV 155
+ +V A + REM+ G P V
Sbjct: 208 SKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDV 267
Query: 156 VSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFN 215
V+ I+I A CK K+ + A++ F+EM R C+P + + +LINGL +++A E F
Sbjct: 268 VAYGIIINAHCKAKK-YEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFE 326
Query: 216 EMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGG 275
+ GF TY +L+ C S + +A + ++EM+ G+ PN TY ++ L +
Sbjct: 327 RSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQ 386
Query: 276 HSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYG 335
S +A E+ + M + P + TY ++ C + + A++I D M+ +G+ P ++
Sbjct: 387 RSKEAYEVYQTMSCE---PTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFS 443
Query: 336 KIISGFCAASSYQDAANFIDEMVLGGISP-----SRATWSLHVRMHNTVVQGLCSNVDSP 390
+I+ C + +A + +EM+ GI P SR +L V L +D
Sbjct: 444 SLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDRL 503
Query: 391 RAFQL 395
R QL
Sbjct: 504 RKTQL 508
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 144/282 (51%), Gaps = 10/282 (3%)
Query: 172 IDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTS 231
+ A+ FH+M G + +S + +++ L + +V +A+++F++M++K F P + +YT
Sbjct: 178 VKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTI 237
Query: 232 LIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKH 291
L+ G Q NL + EMK G EP+V Y +++ CK +A+ M ++
Sbjct: 238 LLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRN 297
Query: 292 NRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAA 351
+P+ + +LINGL E K ++A+E +R + G A Y ++ +C + +DA
Sbjct: 298 CKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAY 357
Query: 352 NFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTF 411
+DEM L G+ P + R ++ ++ L S A+++Y +M + T+
Sbjct: 358 KTVDEMRLKGVGP-------NARTYDIILHHLIRMQRSKEAYEVYQTMSCEPT---VSTY 407
Query: 412 DCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
+ +++ FC + L+ A +I +EM G +P ++ ++ L
Sbjct: 408 EIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITAL 449
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 133/499 (26%), Positives = 224/499 (44%), Gaps = 91/499 (18%)
Query: 17 LVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQ--FRSAEGLLE 74
++++L+ D+ +V F Y+ FRH ++F ++ V A Q F+ + +LE
Sbjct: 55 IMDELMSESSDL--SVWFFKELRDIYA--FRH--SSFSTLLVSHVLAGQRRFKELQVILE 108
Query: 75 RMKQENCV--------VTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKS---- 122
++ QE + D+LL + R+ D++ + KM+D L + +S
Sbjct: 109 QLLQEEGTFRKWESTGLVWDMLLFLS---SRLRMVDDSLYILKKMKDQNLNVSTQSYNSV 165
Query: 123 ------------------------YLTVIDILVEENHVKRAIAFYR-------------- 144
Y TV+D L + ++ A+ F R
Sbjct: 166 LYHFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSF 225
Query: 145 ---------------------EMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMP 183
+ K G+ PSV S NILI LC +I AL++ +M
Sbjct: 226 NSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVG-SIAEALELASDMN 284
Query: 184 NRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLG 243
G +PDS TY L G +G +S A E+ +M +KG SP V+TYT L+ G CQ N+
Sbjct: 285 KHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNID 344
Query: 244 EAIRLLEEMKKNGIEPN-VFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTL 302
+ LL++M G E N + S ++ GLCK G +A+ L M P++V Y +
Sbjct: 345 MGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIV 404
Query: 303 INGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGI 362
I+GLCK GKF A+ + D M + + PN+ +G ++ G C +A + +D ++ G
Sbjct: 405 IHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSG- 463
Query: 363 SPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRG 422
+L + ++N V+ G + A +L+ + GI+ + TF+ LI +CK
Sbjct: 464 ------ETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQ 517
Query: 423 DLNKAARILEEMISDGCVP 441
++ +A +IL+ + G P
Sbjct: 518 NIAEARKILDVIKLYGLAP 536
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 161/356 (45%), Gaps = 55/356 (15%)
Query: 130 LVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQP 189
L + + A++ + +M+ G+ P +V+ +I+I LCK + D AL ++ EM ++ P
Sbjct: 373 LCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGK-FDMALWLYDEMCDKRILP 431
Query: 190 DSYTYGTLINGLC-----------------------------------RMGSVSEAKELF 214
+S T+G L+ GLC + G + EA ELF
Sbjct: 432 NSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF 491
Query: 215 NEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKG 274
+ E G +PSV T+ SLI+G C++ N+ EA ++L+ +K G+ P+V +Y+TLMD
Sbjct: 492 KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANC 551
Query: 275 GHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGK------------FSEAVEILDRM 322
G++ EL M + P VTY + GLC+ K F + + L M
Sbjct: 552 GNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDM 611
Query: 323 RLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQG 382
+G+ P+ Y II C A F++ M + S AT+ N ++
Sbjct: 612 ESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATY-------NILIDS 664
Query: 383 LCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDG 438
LC +A S++ + +S+ + LIK C +GD A ++ +++ G
Sbjct: 665 LCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRG 720
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 157/312 (50%), Gaps = 20/312 (6%)
Query: 154 SVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKEL 213
S++ ++++ LCK ID AL +F++M G PD Y +I+GLC++G A L
Sbjct: 362 SIIPCSVMLSGLCKTGR-IDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWL 420
Query: 214 FNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCK 273
++EM +K P+ T+ +L+ G+CQ L EA LL+ + +G ++ Y+ ++DG K
Sbjct: 421 YDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAK 480
Query: 274 GGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGL 333
G +A+EL ++++ P++ T+ +LI G CK +EA +ILD ++L GL P+
Sbjct: 481 SGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVS 540
Query: 334 YGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGL--------CS 385
Y ++ + + + EM GI P+ T+S+ + +GL C+
Sbjct: 541 YTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSV-------IFKGLCRGWKHENCN 593
Query: 386 NVDSPRAF----QLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVP 441
+V R F Q M + GI + T++ +I+ C+ L+ A LE M S
Sbjct: 594 HVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDA 653
Query: 442 DKGIWDVVMGGL 453
+++++ L
Sbjct: 654 SSATYNILIDSL 665
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 165/375 (44%), Gaps = 35/375 (9%)
Query: 28 INKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQE----NCVV 83
I++A+ +F+ A+ G D + ++I L +F A L + M + N
Sbjct: 379 IDEALSLFNQMKAD---GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRT 435
Query: 84 TEDILLTIC-RGYGRVHRPL-DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIA 141
+LL +C +G R L D++ + D L Y VID + ++ A+
Sbjct: 436 HGALLLGLCQKGMLLEARSLLDSLISSGETLDIVL------YNIVIDGYAKSGCIEEALE 489
Query: 142 FYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGL 201
++ + + GI PSV + N LI CK + I A +I + G P +Y TL++
Sbjct: 490 LFKVVIETGITPSVATFNSLIYGYCKT-QNIAEARKILDVIKLYGLAPSVVSYTTLMDAY 548
Query: 202 CRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQS---DNLGEAIRL---------L 249
G+ EL EM+ +G P+ VTY+ + G+C+ +N +R L
Sbjct: 549 ANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGL 608
Query: 250 EEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKE 309
+M+ GI P+ TY+T++ LC+ H A LE+M +++ + TY LI+ LC
Sbjct: 609 RDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVY 668
Query: 310 GKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATW 369
G +A + ++ Q + + Y +I C + A +++ G + S
Sbjct: 669 GYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVS---- 724
Query: 370 SLHVRMHNTVVQGLC 384
+R ++ V+ LC
Sbjct: 725 ---IRDYSAVINRLC 736
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 104/230 (45%), Gaps = 11/230 (4%)
Query: 90 TICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKM 149
++ GY + +A ++ ++ + L + SY T++D + K REM+
Sbjct: 508 SLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAE 567
Query: 150 GIPPSVVSLNILIKALCKN-----------KETIDSALQIFHEMPNRGCQPDSYTYGTLI 198
GIPP+ V+ +++ K LC+ + + Q +M + G PD TY T+I
Sbjct: 568 GIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTII 627
Query: 199 NGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIE 258
LCR+ +S A M+ + S TY LI +C + +A + +++ +
Sbjct: 628 QYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVS 687
Query: 259 PNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCK 308
+ F Y+TL+ C G A++L ++ + ++ Y +IN LC+
Sbjct: 688 LSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 133/499 (26%), Positives = 224/499 (44%), Gaps = 91/499 (18%)
Query: 17 LVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQ--FRSAEGLLE 74
++++L+ D+ +V F Y+ FRH ++F ++ V A Q F+ + +LE
Sbjct: 55 IMDELMSESSDL--SVWFFKELRDIYA--FRH--SSFSTLLVSHVLAGQRRFKELQVILE 108
Query: 75 RMKQENCV--------VTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKS---- 122
++ QE + D+LL + R+ D++ + KM+D L + +S
Sbjct: 109 QLLQEEGTFRKWESTGLVWDMLLFLS---SRLRMVDDSLYILKKMKDQNLNVSTQSYNSV 165
Query: 123 ------------------------YLTVIDILVEENHVKRAIAFYR-------------- 144
Y TV+D L + ++ A+ F R
Sbjct: 166 LYHFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSF 225
Query: 145 ---------------------EMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMP 183
+ K G+ PSV S NILI LC +I AL++ +M
Sbjct: 226 NSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVG-SIAEALELASDMN 284
Query: 184 NRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLG 243
G +PDS TY L G +G +S A E+ +M +KG SP V+TYT L+ G CQ N+
Sbjct: 285 KHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNID 344
Query: 244 EAIRLLEEMKKNGIEPN-VFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTL 302
+ LL++M G E N + S ++ GLCK G +A+ L M P++V Y +
Sbjct: 345 MGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIV 404
Query: 303 INGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGI 362
I+GLCK GKF A+ + D M + + PN+ +G ++ G C +A + +D ++ G
Sbjct: 405 IHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSG- 463
Query: 363 SPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRG 422
+L + ++N V+ G + A +L+ + GI+ + TF+ LI +CK
Sbjct: 464 ------ETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQ 517
Query: 423 DLNKAARILEEMISDGCVP 441
++ +A +IL+ + G P
Sbjct: 518 NIAEARKILDVIKLYGLAP 536
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 161/356 (45%), Gaps = 55/356 (15%)
Query: 130 LVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQP 189
L + + A++ + +M+ G+ P +V+ +I+I LCK + D AL ++ EM ++ P
Sbjct: 373 LCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGK-FDMALWLYDEMCDKRILP 431
Query: 190 DSYTYGTLINGLC-----------------------------------RMGSVSEAKELF 214
+S T+G L+ GLC + G + EA ELF
Sbjct: 432 NSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF 491
Query: 215 NEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKG 274
+ E G +PSV T+ SLI+G C++ N+ EA ++L+ +K G+ P+V +Y+TLMD
Sbjct: 492 KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANC 551
Query: 275 GHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGK------------FSEAVEILDRM 322
G++ EL M + P VTY + GLC+ K F + + L M
Sbjct: 552 GNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDM 611
Query: 323 RLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQG 382
+G+ P+ Y II C A F++ M + S AT+ N ++
Sbjct: 612 ESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATY-------NILIDS 664
Query: 383 LCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDG 438
LC +A S++ + +S+ + LIK C +GD A ++ +++ G
Sbjct: 665 LCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRG 720
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 157/312 (50%), Gaps = 20/312 (6%)
Query: 154 SVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKEL 213
S++ ++++ LCK ID AL +F++M G PD Y +I+GLC++G A L
Sbjct: 362 SIIPCSVMLSGLCKTGR-IDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWL 420
Query: 214 FNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCK 273
++EM +K P+ T+ +L+ G+CQ L EA LL+ + +G ++ Y+ ++DG K
Sbjct: 421 YDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAK 480
Query: 274 GGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGL 333
G +A+EL ++++ P++ T+ +LI G CK +EA +ILD ++L GL P+
Sbjct: 481 SGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVS 540
Query: 334 YGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGL--------CS 385
Y ++ + + + EM GI P+ T+S+ + +GL C+
Sbjct: 541 YTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSV-------IFKGLCRGWKHENCN 593
Query: 386 NVDSPRAF----QLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVP 441
+V R F Q M + GI + T++ +I+ C+ L+ A LE M S
Sbjct: 594 HVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDA 653
Query: 442 DKGIWDVVMGGL 453
+++++ L
Sbjct: 654 SSATYNILIDSL 665
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 165/375 (44%), Gaps = 35/375 (9%)
Query: 28 INKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQE----NCVV 83
I++A+ +F+ A+ G D + ++I L +F A L + M + N
Sbjct: 379 IDEALSLFNQMKAD---GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRT 435
Query: 84 TEDILLTIC-RGYGRVHRPL-DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIA 141
+LL +C +G R L D++ + D L Y VID + ++ A+
Sbjct: 436 HGALLLGLCQKGMLLEARSLLDSLISSGETLDIVL------YNIVIDGYAKSGCIEEALE 489
Query: 142 FYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGL 201
++ + + GI PSV + N LI CK + I A +I + G P +Y TL++
Sbjct: 490 LFKVVIETGITPSVATFNSLIYGYCKT-QNIAEARKILDVIKLYGLAPSVVSYTTLMDAY 548
Query: 202 CRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQS---DNLGEAIRL---------L 249
G+ EL EM+ +G P+ VTY+ + G+C+ +N +R L
Sbjct: 549 ANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGL 608
Query: 250 EEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKE 309
+M+ GI P+ TY+T++ LC+ H A LE+M +++ + TY LI+ LC
Sbjct: 609 RDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVY 668
Query: 310 GKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATW 369
G +A + ++ Q + + Y +I C + A +++ G + S
Sbjct: 669 GYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVS---- 724
Query: 370 SLHVRMHNTVVQGLC 384
+R ++ V+ LC
Sbjct: 725 ---IRDYSAVINRLC 736
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 104/230 (45%), Gaps = 11/230 (4%)
Query: 90 TICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKM 149
++ GY + +A ++ ++ + L + SY T++D + K REM+
Sbjct: 508 SLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAE 567
Query: 150 GIPPSVVSLNILIKALCKN-----------KETIDSALQIFHEMPNRGCQPDSYTYGTLI 198
GIPP+ V+ +++ K LC+ + + Q +M + G PD TY T+I
Sbjct: 568 GIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTII 627
Query: 199 NGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIE 258
LCR+ +S A M+ + S TY LI +C + +A + +++ +
Sbjct: 628 QYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVS 687
Query: 259 PNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCK 308
+ F Y+TL+ C G A++L ++ + ++ Y +IN LC+
Sbjct: 688 LSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 199/407 (48%), Gaps = 11/407 (2%)
Query: 37 SATAEYSNGFRHDHTTFGVMISRLVAANQFRS-AEGLLERMKQENCVVTEDILLTICRGY 95
SA + S +HD + +++S L+ ++ S A L ++ E + D L +
Sbjct: 97 SAFSLSSPSLKHDFSY--LLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHL 154
Query: 96 GRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSV 155
+ + I VF + + + ++ Y I V+ + V + + + M+ I PSV
Sbjct: 155 VKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSV 214
Query: 156 VSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFN 215
N+LI LCK K ++ A Q+F EM R P TY TLI+G C+ G+ ++ ++
Sbjct: 215 FIYNVLIDGLCKGKR-MNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRE 273
Query: 216 EMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGG 275
M+ PS++T+ +L+ G+ ++ + +A +L+EMK G P+ FT+S L DG
Sbjct: 274 RMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNE 333
Query: 276 HSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYG 335
+ A+ + E V + N T L+N LCKEGK +A EIL R +GL PN +Y
Sbjct: 334 KAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYN 393
Query: 336 KIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQL 395
+I G+C A I+ M G+ P + N +++ C + A +
Sbjct: 394 TMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAY-------NCLIRRFCELGEMENAEKE 446
Query: 396 YLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPD 442
M+ +G+S ++T++ LI + ++ + +K IL+EM +G +P+
Sbjct: 447 VNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPN 493
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 122/461 (26%), Positives = 202/461 (43%), Gaps = 62/461 (13%)
Query: 52 TFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKM 111
TF ++ L A AE +L+ MK V + GY + A+ V+
Sbjct: 286 TFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETA 345
Query: 112 EDFQLKFTQKSYLTVIDILVEENHVKRAIAFY-REMRKMGIPPSVVSLNILIKALCKNKE 170
D +K + +++ L +E +++A REM K G+ P+ V N +I C+ +
Sbjct: 346 VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAK-GLVPNEVIYNTMIDGYCRKGD 404
Query: 171 TIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYT 230
+ + ++I M +G +PD Y LI C +G + A++ N+M+ KG SPSV TY
Sbjct: 405 LVGARMKI-EAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYN 463
Query: 231 SLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQA---------- 280
LI G + + +L+EM+ NG PNV +Y TL++ LCKG L+A
Sbjct: 464 ILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDR 523
Query: 281 -------------------------MELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEA 315
+ M+ K N+VTY TLI+GL GK SEA
Sbjct: 524 GVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEA 583
Query: 316 VEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRM 375
++L + +GLKP+ Y +ISG+ A + Q +EM GI P+ T+ L + +
Sbjct: 584 EDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISL 643
Query: 376 ------------------------HNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTF 411
+N V+ + D +AF L M + I ++ T+
Sbjct: 644 CTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTY 703
Query: 412 DCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGG 452
+ LI K G L + +++EM + P+ +++++ G
Sbjct: 704 NSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKG 744
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 163/370 (44%), Gaps = 39/370 (10%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
G + DH + +I R + +AE + +MK + + + + GYGR +
Sbjct: 419 GMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKC 478
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
+ +MED SY T+I+ L + + + A R+M G+ P V N+LI
Sbjct: 479 FDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDG 538
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
C +K I+ A + EM +G + + TY TLI+GL G +SEA++L E+ KG P
Sbjct: 539 CC-SKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKP 597
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSL------ 278
V TY SLI G + N+ I L EEMK++GI+P + TY L+ K G L
Sbjct: 598 DVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFG 657
Query: 279 -------------------------QAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFS 313
+A L + M+ K + TY +LI G K GK
Sbjct: 658 EMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLC 717
Query: 314 EAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHV 373
E ++D M + ++P A Y I+ G C Y A + EM G + L V
Sbjct: 718 EVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKG-------FLLDV 770
Query: 374 RMHNTVVQGL 383
+ N +V GL
Sbjct: 771 CIGNELVSGL 780
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 113/255 (44%), Gaps = 12/255 (4%)
Query: 208 SEAKELFNEMEEKGFSPSV---VTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTY 264
+ KELF+ SPS+ +Y L + +S + EA L ++ GI P+ +
Sbjct: 90 ASPKELFSAFSLS--SPSLKHDFSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSL 147
Query: 265 STLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRL 324
+ L+D L K + + ++ RP+ YG I K + +E+ +RM+
Sbjct: 148 TLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKH 207
Query: 325 QGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLC 384
+ P+ +Y +I G C DA DEM+ + PS T+ NT++ G C
Sbjct: 208 DRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITY-------NTLIDGYC 260
Query: 385 SNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKG 444
+ ++F++ M+ I + TF+ L+K K G + A +L+EM G VPD
Sbjct: 261 KAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAF 320
Query: 445 IWDVVMGGLWDRKKV 459
+ ++ G +K
Sbjct: 321 TFSILFDGYSSNEKA 335
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 155/370 (41%), Gaps = 52/370 (14%)
Query: 24 AEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQE---- 79
AEK++NK L S + E T+ ++I +F +L+ M+
Sbjct: 443 AEKEVNKMKLKGVSPSVE----------TYNILIGGYGRKYEFDKCFDILKEMEDNGTMP 492
Query: 80 NCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRA 139
N V ++ +C+G + L+A V MED + + Y +ID + ++ A
Sbjct: 493 NVVSYGTLINCLCKG----SKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDA 548
Query: 140 IAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLIN 199
F +EM K GI ++V+ N LI L + + A + E+ +G +PD +TY +LI+
Sbjct: 549 FRFSKEMLKKGIELNLVTYNTLIDGLSMTGK-LSEAEDLLLEISRKGLKPDVFTYNSLIS 607
Query: 200 GLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEM------- 252
G G+V L+ EM+ G P++ TY LI +C + + RL EM
Sbjct: 608 GYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEMSLKPDLL 666
Query: 253 ---------------------KKNGIEPNV----FTYSTLMDGLCKGGHSLQAMELLEMM 287
+K IE ++ TY++L+ G K G + L++ M
Sbjct: 667 VYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEM 726
Query: 288 VTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSY 347
+ P TY ++ G C+ + A M+ +G + + +++SG
Sbjct: 727 NAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRS 786
Query: 348 QDAANFIDEM 357
++A I EM
Sbjct: 787 KEAEIVISEM 796
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 220/481 (45%), Gaps = 51/481 (10%)
Query: 13 ITSSLVEQLIKA---EKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSA 69
++ +++ +L+KA K ++KA+ +F A + +T+ +I L+ Q
Sbjct: 160 VSPAVLSELVKALGRAKMVSKALSVFYQAKGRKC---KPTSSTYNSVILMLMQEGQHEKV 216
Query: 70 EGLLERMKQE-NCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVID 128
+ M E +C + Y ++ R AIR+F +M+D ++ T+K Y T++
Sbjct: 217 HEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLG 276
Query: 129 ILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQ 188
I + V++A+ + EM++ G P+V + LIK L K +D A + +M G
Sbjct: 277 IYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGR-VDEAYGFYKDMLRDGLT 335
Query: 189 PDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSD-NLGEAIR 247
PD L+N L ++G V E +F+EM +P+VV+Y ++I + +S ++ E
Sbjct: 336 PDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSS 395
Query: 248 LLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLC 307
++MK + + P+ FTYS L+DG CK +A+ LLE M K P Y +LIN L
Sbjct: 396 WFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALG 455
Query: 308 KE-----------------------------------GKFSEAVEILDRMRLQGLKPNAG 332
K GK SEAV++ + M+ QG P+
Sbjct: 456 KAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVY 515
Query: 333 LYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRA 392
Y ++SG A +A + + +M G RA + HN ++ G RA
Sbjct: 516 AYNALMSGMVKAGMINEANSLLRKMEENGC---RA----DINSHNIILNGFARTGVPRRA 568
Query: 393 FQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGG 452
+++ +++ GI + T++ L+ CF G +AAR++ EM G D + ++
Sbjct: 569 IEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDA 628
Query: 453 L 453
+
Sbjct: 629 V 629
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 211/445 (47%), Gaps = 13/445 (2%)
Query: 12 QITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEG 71
++ LV +++ + +IN + F A F+HD +T+ +I L A +
Sbjct: 90 KVDHRLVRSILEIDVEINVKIQFFKWAGKR--RNFQHDCSTYMTLIRCLEEARLYGEMYR 147
Query: 72 LLERMKQENCV-VTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDIL 130
++ + + V V+ +L + + GR A+ VF++ + + K T +Y +VI +L
Sbjct: 148 TIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILML 207
Query: 131 VEENHVKRAIAFYREMRKMG-IPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQP 189
++E ++ Y EM G P ++ + LI + K DSA+++F EM + QP
Sbjct: 208 MQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRN-DSAIRLFDEMKDNCMQP 266
Query: 190 DSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLL 249
Y TL+ ++G V +A +LF EM+ G SP+V TYT LI G+ ++ + EA
Sbjct: 267 TEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFY 326
Query: 250 EEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCK- 308
++M ++G+ P+V + LM+ L K G + + M P +V+Y T+I L +
Sbjct: 327 KDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFES 386
Query: 309 EGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRAT 368
+ SE D+M+ + P+ Y +I G+C + + A ++EM G P A
Sbjct: 387 KAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAA 446
Query: 369 WSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAA 428
+ +++ L A +L+ ++ ++ + +IK F K G L++A
Sbjct: 447 YC-------SLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAV 499
Query: 429 RILEEMISDGCVPDKGIWDVVMGGL 453
+ EM + G PD ++ +M G+
Sbjct: 500 DLFNEMKNQGSGPDVYAYNALMSGM 524
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 117/262 (44%), Gaps = 4/262 (1%)
Query: 15 SSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLE 74
+++++ L +++ +++ FD A + T+ ++I N+ A LLE
Sbjct: 377 NTVIKALFESKAHVSEVSSWFDKMKA---DSVSPSEFTYSILIDGYCKTNRVEKALLLLE 433
Query: 75 RMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEEN 134
M ++ ++ G+ R A +F ++++ + + Y +I +
Sbjct: 434 EMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCG 493
Query: 135 HVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTY 194
+ A+ + EM+ G P V + N L+ + K I+ A + +M GC+ D ++
Sbjct: 494 KLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAG-MINEANSLLRKMEENGCRADINSH 552
Query: 195 GTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKK 254
++NG R G A E+F ++ G P VTY +L+ + EA R++ EMK
Sbjct: 553 NIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKD 612
Query: 255 NGIEPNVFTYSTLMDGLCKGGH 276
G E + TYS+++D + H
Sbjct: 613 KGFEYDAITYSSILDAVGNVDH 634
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 170/346 (49%), Gaps = 11/346 (3%)
Query: 111 MEDFQLKFTQK---SYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCK 167
+ED L + +Y TVI + + + ++AI F+++ + G PP +++ +L++ +C+
Sbjct: 197 LEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCR 256
Query: 168 NKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVV 227
+ A+++ +M GC PD TY +L+N CR G++ E + + G + V
Sbjct: 257 YCGSA-RAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTV 315
Query: 228 TYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMM 287
TY +L+H +C + E +L M + P V TY+ L++GLCK +A++ M
Sbjct: 316 TYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQM 375
Query: 288 VTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSY 347
+ + P++VTY T++ + KEG +A+E+L ++ P Y +I G
Sbjct: 376 LEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLM 435
Query: 348 QDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIE 407
+ A +M+ GI P T +++ G C A Q+ RG I
Sbjct: 436 KKALELYHQMLDAGIFPDDIT-------RRSLIYGFCRANLVEEAGQVLKETSNRGNGIR 488
Query: 408 IDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
T+ +I+ CK+ ++ A ++E M++ GC PD+ I+ ++ G+
Sbjct: 489 GSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGV 534
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 186/412 (45%), Gaps = 8/412 (1%)
Query: 48 HDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRV 107
+D T ++ L + + A L+E M + N V + RG R+ + A+ +
Sbjct: 102 NDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCI 161
Query: 108 FHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCK 167
M +Y +I L ++ H++ A+ +M G PP V++ N +I+ +
Sbjct: 162 LRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCM-F 220
Query: 168 NKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVV 227
+ + A++ + + GC P TY L+ +CR + A E+ +M +G P +V
Sbjct: 221 DYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIV 280
Query: 228 TYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMM 287
TY SL++ C+ NL E +++ + +G+E N TY+TL+ LC + + E+L +M
Sbjct: 281 TYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIM 340
Query: 288 VTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSY 347
P ++TY LINGLCK S A++ +M Q P+ Y ++
Sbjct: 341 YQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMV 400
Query: 348 QDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIE 407
DA + + P T+ N+V+ GL +A +LY M GI +
Sbjct: 401 DDAIELLGLLKNTCCPPGLITY-------NSVIDGLAKKGLMKKALELYHQMLDAGIFPD 453
Query: 408 IDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
T LI FC+ + +A ++L+E + G + +V+ GL +K++
Sbjct: 454 DITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEI 505
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 112/198 (56%), Gaps = 1/198 (0%)
Query: 119 TQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQI 178
T +Y +I+ L + + RAI F+ +M + P +V+ N ++ A+ K + +D A+++
Sbjct: 348 TVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSK-EGMVDDAIEL 406
Query: 179 FHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQ 238
+ N C P TY ++I+GL + G + +A EL+++M + G P +T SLI+G C+
Sbjct: 407 LGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCR 466
Query: 239 SDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVT 298
++ + EA ++L+E G TY ++ GLCK A+E++E+M+T +P+
Sbjct: 467 ANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETI 526
Query: 299 YGTLINGLCKEGKFSEAV 316
Y ++ G+ + G SEAV
Sbjct: 527 YTAIVKGVEEMGMGSEAV 544
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 7/198 (3%)
Query: 42 YSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENC---VVTEDILLTICRGYGRV 98
Y + T+ ++I+ L A A +M ++ C +VT + +L G V
Sbjct: 341 YQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMV 400
Query: 99 HRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSL 158
DAI + +++ +Y +VID L ++ +K+A+ Y +M GI P ++
Sbjct: 401 D---DAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITR 457
Query: 159 NILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEME 218
LI C+ ++ A Q+ E NRG TY +I GLC+ + A E+ M
Sbjct: 458 RSLIYGFCR-ANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIML 516
Query: 219 EKGFSPSVVTYTSLIHGM 236
G P YT+++ G+
Sbjct: 517 TGGCKPDETIYTAIVKGV 534
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 182/395 (46%), Gaps = 44/395 (11%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
G+ H + M+ L QF + GL+E M++ N + E L
Sbjct: 126 GYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPEL---------------- 169
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
++ ++ N VK+A+ EM K G+ P L+ A
Sbjct: 170 ------------------FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDA 211
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
LCKN ++ A ++F +M + P+ + +L+ G CR G + EAKE+ +M+E G P
Sbjct: 212 LCKNG-SVKEASKVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEP 269
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSL-QAMEL 283
+V +T+L+ G + + +A L+ +M+K G EPNV Y+ L+ LC+ + +AM +
Sbjct: 270 DIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRV 329
Query: 284 LEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCA 343
M ++VTY LI+G CK G + +LD MR +G+ P+ Y +I+
Sbjct: 330 FVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEK 389
Query: 344 ASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRG 403
+++ I++M G P + ++N V++ C + A +L+ M G
Sbjct: 390 KEQFEECLELIEKMKRRGCHPD-------LLIYNVVIRLACKLGEVKEAVRLWNEMEANG 442
Query: 404 ISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDG 438
+S +DTF +I F +G L +A +EM+S G
Sbjct: 443 LSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRG 477
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 156/310 (50%), Gaps = 9/310 (2%)
Query: 145 EMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRM 204
EMRK L +++ + + A+++ EMP G +PD Y +G L++ LC+
Sbjct: 156 EMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKN 215
Query: 205 GSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTY 264
GSV EA ++F +M EK F P++ +TSL++G C+ L EA +L +MK+ G+EP++ +
Sbjct: 216 GSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVF 274
Query: 265 STLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCK-EGKFSEAVEILDRMR 323
+ L+ G G A +L+ M + PN+ Y LI LC+ E + EA+ + M
Sbjct: 275 TNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEME 334
Query: 324 LQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGL 383
G + + Y +ISGFC + +D+M G+ PS+ T+ + H Q
Sbjct: 335 RYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQ-- 392
Query: 384 CSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDK 443
+L M+ RG ++ ++ +I+ CK G++ +A R+ EM ++G P
Sbjct: 393 -----FEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGV 447
Query: 444 GIWDVVMGGL 453
+ +++ G
Sbjct: 448 DTFVIMINGF 457
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 179/410 (43%), Gaps = 11/410 (2%)
Query: 28 INKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDI 87
+ KAV + D G D FG ++ L + A + E M+ E
Sbjct: 183 VKKAVEVLDEMP---KYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMR-EKFPPNLRY 238
Query: 88 LLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMR 147
++ G+ R + ++A V +M++ L+ + ++ + A +MR
Sbjct: 239 FTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMR 298
Query: 148 KMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSV 207
K G P+V +LI+ALC+ ++ +D A+++F EM GC+ D TY LI+G C+ G +
Sbjct: 299 KRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMI 358
Query: 208 SEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTL 267
+ + ++M +KG PS VTY ++ + + E + L+E+MK+ G P++ Y+ +
Sbjct: 359 DKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVV 418
Query: 268 MDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGL 327
+ CK G +A+ L M P + T+ +ING +G EA M +G+
Sbjct: 419 IRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI 478
Query: 328 --KPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCS 385
P G +++ + A + V IS ++ L+V + L +
Sbjct: 479 FSAPQYGTLKSLLNNLVRDDKLEMAKD-----VWSCISNKTSSCELNVSAWTIWIHALYA 533
Query: 386 NVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMI 435
A L M + + +T+ L+K K + AA I E+++
Sbjct: 534 KGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNKLYNRTIAAEITEKVV 583
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 165/347 (47%), Gaps = 10/347 (2%)
Query: 115 QLKFTQ--KSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETI 172
Q K+T + Y++++D+L V R E++K P +V + N LIK+ K +
Sbjct: 145 QKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGK-LGMV 203
Query: 173 DSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSL 232
+ L ++ +M G +P YTY L+NGL V A+ +F ME P +VTY ++
Sbjct: 204 EELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTM 263
Query: 233 IHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHN 292
I G C++ +A+ L +M+ G E + TY T++ + L + M K
Sbjct: 264 IKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGI 323
Query: 293 RPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAAN 352
+ + +I GLCKEGK +E + + M +G KPN +Y +I G+ + S +DA
Sbjct: 324 QVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIR 383
Query: 353 FIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFD 412
+ M+ G P T+S+ VV GLC N A + + R G++I +
Sbjct: 384 LLHRMIDEGFKPDVVTYSV-------VVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYS 436
Query: 413 CLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
LI K G +++A R+ EEM GC D ++ ++ +KV
Sbjct: 437 SLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKV 483
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/469 (23%), Positives = 200/469 (42%), Gaps = 34/469 (7%)
Query: 10 PKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSA 69
P ++ L I+ + DI + + +Y+ H+ + ++ L A
Sbjct: 116 PNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYT----HNLECYVSLVDVLALAKDVDRI 171
Query: 70 EGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDI 129
+ +K+ +T + + +G++ + + V+ KM++ ++ T +Y +++
Sbjct: 172 RFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNG 231
Query: 130 LVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQP 189
LV V A + M I P +V+ N +IK CK +T A++ +M RG +
Sbjct: 232 LVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQT-QKAMEKLRDMETRGHEA 290
Query: 190 DSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLL 249
D TY T+I L+ EM+EKG ++ +I G+C+ L E +
Sbjct: 291 DKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVF 350
Query: 250 EEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKE 309
E M + G +PNV Y+ L+DG K G A+ LL M+ + +P++VTY ++NGLCK
Sbjct: 351 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 410
Query: 310 GKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATW 369
G+ EA++ R GL N+ Y +I G A +A +EM G + +
Sbjct: 411 GRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCY 470
Query: 370 -----------------SLHVRM------------HNTVVQGLCSNVDSPRAFQLYLSMR 400
+L RM + ++ G+ + A +L+ M
Sbjct: 471 NALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMI 530
Query: 401 TRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVV 449
+GI+ F L C G + +A +IL+E+ G + D D++
Sbjct: 531 DKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMI 579
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 176/357 (49%), Gaps = 10/357 (2%)
Query: 100 RPLDAIR-VFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSL 158
+ +D IR V +++ F+ T + +I + V+ + +R+M++ GI P++ +
Sbjct: 166 KDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTY 225
Query: 159 NILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEME 218
N L+ L + +DSA ++F M + +PD TY T+I G C+ G +A E +ME
Sbjct: 226 NFLMNGLV-SAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDME 284
Query: 219 EKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSL 278
+G +TY ++I + G + L +EM + GI+ +S ++ GLCK G
Sbjct: 285 TRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLN 344
Query: 279 QAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKII 338
+ + E M+ K ++PN+ Y LI+G K G +A+ +L RM +G KP+ Y ++
Sbjct: 345 EGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVV 404
Query: 339 SGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLS 398
+G C ++A ++ G+ +++ +++++ GL A +L+
Sbjct: 405 NGLCKNGRVEEALDYFHTCRFDGL-------AINSMFYSSLIDGLGKAGRVDEAERLFEE 457
Query: 399 MRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEM-ISDGCVPDKGIWDVVMGGLW 454
M +G + + ++ LI F K +++A + + M +GC + +++ G++
Sbjct: 458 MSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMF 514
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 144/314 (45%), Gaps = 3/314 (0%)
Query: 43 SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPL 102
+ G D T+ MI A + F S L + M ++ V + G + +
Sbjct: 285 TRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLN 344
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
+ VF M K Y +ID + V+ AI M G P VV+ ++++
Sbjct: 345 EGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVV 404
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF 222
LCKN ++ AL FH G +S Y +LI+GL + G V EA+ LF EM EKG
Sbjct: 405 NGLCKNGR-VEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGC 463
Query: 223 SPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKN-GIEPNVFTYSTLMDGLCKGGHSLQAM 281
+ Y +LI + + EAI L + M++ G + V+TY+ L+ G+ K + +A+
Sbjct: 464 TRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEAL 523
Query: 282 ELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGF 341
+L +MM+ K P + L GLC GK + A +ILD + G+ +A +I+
Sbjct: 524 KLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAAC-EDMINTL 582
Query: 342 CAASSYQDAANFID 355
C A ++A D
Sbjct: 583 CKAGRIKEACKLAD 596
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 143/315 (45%), Gaps = 15/315 (4%)
Query: 10 PKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSA 69
P S ++ L K E +N+ +F++ + G + + + V+I + A
Sbjct: 326 PPHAFSLVIGGLCK-EGKLNEGYTVFENMIRK---GSKPNVAIYTVLIDGYAKSGSVEDA 381
Query: 70 EGLLERMKQENC---VVTEDILLT-ICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLT 125
LL RM E VVT +++ +C+ GRV LD FH L Y +
Sbjct: 382 IRLLHRMIDEGFKPDVVTYSVVVNGLCKN-GRVEEALD---YFHTCRFDGLAINSMFYSS 437
Query: 126 VIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR 185
+ID L + V A + EM + G N LI A K+++ +D A+ +F M
Sbjct: 438 LIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRK-VDEAIALFKRMEEE 496
Query: 186 -GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGE 244
GC YTY L++G+ + EA +L++ M +KG +P+ + +L G+C S +
Sbjct: 497 EGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVAR 556
Query: 245 AIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLIN 304
A ++L+E+ G+ + +++ LCK G +A +L + + + +IN
Sbjct: 557 ACKILDELAPMGVILDA-ACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMIN 615
Query: 305 GLCKEGKFSEAVEIL 319
L K GK A++++
Sbjct: 616 ALRKVGKADLAMKLM 630
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 99/235 (42%), Gaps = 7/235 (2%)
Query: 218 EEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHS 277
++K ++ ++ Y SL+ + + ++ + E+KK V + L+ K G
Sbjct: 144 KQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMV 203
Query: 278 LQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKI 337
+ + + M P + TY L+NGL A + + M +KP+ Y +
Sbjct: 204 EELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTM 263
Query: 338 ISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYL 397
I G+C A Q A + +M G + T+ T++Q ++ D LY
Sbjct: 264 IKGYCKAGQTQKAMEKLRDMETRGHEADKITYM-------TMIQACYADSDFGSCVALYQ 316
Query: 398 SMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGG 452
M +GI + F +I CK G LN+ + E MI G P+ I+ V++ G
Sbjct: 317 EMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDG 371
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 104/442 (23%), Positives = 204/442 (46%), Gaps = 44/442 (9%)
Query: 51 TTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLD-AIRVFH 109
T FG+M+ A ERM+ T I ++ Y V R +D A+
Sbjct: 310 TEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYA-VGRDMDEALSCVR 368
Query: 110 KMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKN- 168
KM++ ++ + +Y ++ + H + A ++ E +++ + +I A C+
Sbjct: 369 KMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTC 428
Query: 169 -------------KETIDSALQIFHEMPNR--------------------GCQPDSYTYG 195
+E ID+ + I+H M + G P TYG
Sbjct: 429 NMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYG 488
Query: 196 TLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKN 255
LIN ++G +S+A E+ M+E+G ++ TY+ +I+G + + A + E+M K
Sbjct: 489 CLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKE 548
Query: 256 GIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEA 315
G++P+V Y+ ++ C G+ +A++ ++ M +RP T+ +I+G K G +
Sbjct: 549 GMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRS 608
Query: 316 VEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRM 375
+E+ D MR G P + +I+G + A +DEM L G+S + T++
Sbjct: 609 LEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYT----- 663
Query: 376 HNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMI 435
++QG S D+ +AF+ + ++ G+ ++I T++ L+K CK G + A + +EM
Sbjct: 664 --KIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMS 721
Query: 436 SDGCVPDKGIWDVVMGGLWDRK 457
+ + ++++++ G W R+
Sbjct: 722 ARNIPRNSFVYNILIDG-WARR 742
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 191/387 (49%), Gaps = 24/387 (6%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQE----NCVVTEDILLTICRGYGRVHR 100
G +H+ T+ +MI+ V + +A + E M +E + ++ +I+ C G G + R
Sbjct: 514 GVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFC-GMGNMDR 572
Query: 101 PLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNI 160
AI+ +M+ + + T ++++ +I + ++R++ + MR+ G P+V + N
Sbjct: 573 ---AIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNG 629
Query: 161 LIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
LI L + ++ ++ A++I EM G + +TY ++ G +G +A E F ++ +
Sbjct: 630 LINGLVEKRQ-MEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNE 688
Query: 221 GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQA 280
G + TY +L+ C+S + A+ + +EM I N F Y+ L+DG + G +A
Sbjct: 689 GLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEA 748
Query: 281 MELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISG 340
+L++ M + +P++ TY + I+ K G + A + ++ M G+KPN Y +I G
Sbjct: 749 ADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKG 808
Query: 341 FCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMR 400
+ AS + A + +EM GI P +A +++ ++ L S A+ +Y +
Sbjct: 809 WARASLPEKALSCYEEMKAMGIKPDKA-------VYHCLLTSLLSRASIAEAY-IYSGVM 860
Query: 401 T-------RGISIEIDTFDCLIKCFCK 420
T G+ +++ T KC CK
Sbjct: 861 TICKEMVEAGLIVDMGTAVHWSKCLCK 887
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 177/379 (46%), Gaps = 13/379 (3%)
Query: 82 VVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIA 141
VVT L+ + G++ + L+ RV M++ +K K+Y +I+ V+ A A
Sbjct: 484 VVTYGCLINLYTKVGKISKALEVSRV---MKEEGVKHNLKTYSMMINGFVKLKDWANAFA 540
Query: 142 FYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGL 201
+ +M K G+ P V+ N +I A C +D A+Q EM +P + T+ +I+G
Sbjct: 541 VFEDMVKEGMKPDVILYNNIISAFC-GMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGY 599
Query: 202 CRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNV 261
+ G + + E+F+ M G P+V T+ LI+G+ + + +A+ +L+EM G+ N
Sbjct: 600 AKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANE 659
Query: 262 FTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDR 321
TY+ +M G G + +A E + + ++ TY L+ CK G+ A+ +
Sbjct: 660 HTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKE 719
Query: 322 MRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQ 381
M + + N+ +Y +I G+ +AA+ I +M G+ P T++ +
Sbjct: 720 MSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFI-------- 771
Query: 382 GLCSNV-DSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCV 440
CS D RA Q M G+ I T+ LIK + + KA EEM + G
Sbjct: 772 SACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIK 831
Query: 441 PDKGIWDVVMGGLWDRKKV 459
PDK ++ ++ L R +
Sbjct: 832 PDKAVYHCLLTSLLSRASI 850
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 188/406 (46%), Gaps = 9/406 (2%)
Query: 51 TTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHK 110
+ +G +I AE L+ M++E I T+ GY V + VF +
Sbjct: 415 SIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKR 474
Query: 111 MEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKE 170
+++ T +Y +I++ + + +A+ R M++ G+ ++ + +++I K K+
Sbjct: 475 LKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKD 534
Query: 171 TIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYT 230
+ A +F +M G +PD Y +I+ C MG++ A + EM++ P+ T+
Sbjct: 535 WAN-AFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFM 593
Query: 231 SLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTK 290
+IHG +S ++ ++ + + M++ G P V T++ L++GL + +A+E+L+ M
Sbjct: 594 PIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLA 653
Query: 291 HNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDA 350
N TY ++ G G +A E R++ +GL + Y ++ C + Q A
Sbjct: 654 GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSA 713
Query: 351 ANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDT 410
EM I R ++ ++N ++ G D A L M+ G+ +I T
Sbjct: 714 LAVTKEMSARNIP--RNSF-----VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHT 766
Query: 411 FDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDR 456
+ I K GD+N+A + +EEM + G P+ + ++ G W R
Sbjct: 767 YTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKG-WAR 811
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 119/266 (44%), Gaps = 7/266 (2%)
Query: 188 QPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIR 247
+P +G ++ R G + A+E F M +G +P+ YTSLIH ++ EA+
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365
Query: 248 LLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLC 307
+ +MK+ GIE ++ TYS ++ G K GH+ A + H N YG +I C
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 425
Query: 308 KEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRA 367
+ A ++ M +G+ +Y ++ G+ + + + G +P+
Sbjct: 426 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVV 485
Query: 368 TWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKA 427
T+ + ++ V G S +A ++ M+ G+ + T+ +I F K D A
Sbjct: 486 TYGCLINLYTKV--GKIS-----KALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA 538
Query: 428 ARILEEMISDGCVPDKGIWDVVMGGL 453
+ E+M+ +G PD +++ ++
Sbjct: 539 FAVFEDMVKEGMKPDVILYNNIISAF 564
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 170/358 (47%), Gaps = 2/358 (0%)
Query: 14 TSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLL 73
T +LV ++K + L F + + HD ++F + I + + L+
Sbjct: 55 TPNLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLI 114
Query: 74 ERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEE 133
RM+ + + Y +P A+++F M + S+ T++D+L +
Sbjct: 115 HRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKS 174
Query: 134 NHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYT 193
V++A +R +R V+ N+++ C K T AL++ EM RG P+ T
Sbjct: 175 KRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRT-PKALEVLKEMVERGINPNLTT 232
Query: 194 YGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMK 253
Y T++ G R G + A E F EM+++ VVTYT+++HG + + A + +EM
Sbjct: 233 YNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMI 292
Query: 254 KNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFS 313
+ G+ P+V TY+ ++ LCK + A+ + E MV + PN+ TY LI GL G+FS
Sbjct: 293 REGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFS 352
Query: 314 EAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSL 371
E++ RM +G +PN Y +I + S + A ++M G P+ T+++
Sbjct: 353 RGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNI 410
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 176/362 (48%), Gaps = 12/362 (3%)
Query: 99 HRPLDAIRVFHKMEDFQLKFTQ--KSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVV 156
H P A++ FH +++ ++ S+ IDI + + MR + I PS
Sbjct: 69 HGP-KALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPK 127
Query: 157 SLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNE 216
+ I+ + + D A+++F M GC D ++ T+++ LC+ V +A ELF
Sbjct: 128 TFAIVAERYASAGKP-DKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRA 186
Query: 217 MEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGH 276
+ + FS VTY +++G C +A+ +L+EM + GI PN+ TY+T++ G + G
Sbjct: 187 LRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQ 245
Query: 277 SLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGK 336
A E M + ++VTY T+++G G+ A + D M +G+ P+ Y
Sbjct: 246 IRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNA 305
Query: 337 IISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLY 396
+I C + ++A +EMV G P+ T+ N +++GL + R +L
Sbjct: 306 MIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTY-------NVLIRGLFHAGEFSRGEELM 358
Query: 397 LSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDR 456
M G T++ +I+ + + ++ KA + E+M S C+P+ +++++ G++ R
Sbjct: 359 QRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVR 418
Query: 457 KK 458
K+
Sbjct: 419 KR 420
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 152/320 (47%), Gaps = 9/320 (2%)
Query: 96 GRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSV 155
R+H + H+M ++ + K++ V + +A+ + M + G +
Sbjct: 102 ARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDL 161
Query: 156 VSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFN 215
S N ++ LCK+K ++ A ++F + R D+ TY ++NG C + +A E+
Sbjct: 162 ASFNTILDVLCKSKR-VEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLK 219
Query: 216 EMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGG 275
EM E+G +P++ TY +++ G ++ + A EMKK E +V TY+T++ G G
Sbjct: 220 EMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAG 279
Query: 276 HSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYG 335
+A + + M+ + P++ TY +I LCK+ AV + + M +G +PN Y
Sbjct: 280 EIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYN 339
Query: 336 KIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQL 395
+I G A + + M G P+ T+++ +R ++ CS V+ +A L
Sbjct: 340 VLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSE-----CSEVE--KALGL 392
Query: 396 YLSMRTRGISIEIDTFDCLI 415
+ M + +DT++ LI
Sbjct: 393 FEKMGSGDCLPNLDTYNILI 412
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/465 (25%), Positives = 199/465 (42%), Gaps = 60/465 (12%)
Query: 47 RHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRG------------ 94
+H + MI L F++A LL+++ Q + + +L ++ G
Sbjct: 77 KHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVF 136
Query: 95 ------YGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRK 148
Y + D+I VF ++ LK ++ +++ LV++ +++M K
Sbjct: 137 SWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVK 196
Query: 149 MGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVS 208
+G+ ++ N+L+ A C + A ++ EM +G PD +TY TLI+ C+
Sbjct: 197 LGVVANIHVYNVLVHA-CSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHF 255
Query: 209 EAKELFNEMEEKGFSPSVVTYTSLIHGM-------------------------------- 236
EA + + ME G +P++VTY S IHG
Sbjct: 256 EALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLID 315
Query: 237 --CQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRP 294
C+ +++ EA+RL E M+ G P V TY++++ LC+ G +A LL M K P
Sbjct: 316 GYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEP 375
Query: 295 NMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFI 354
+ +T TLIN CK AV++ +M GLK + Y +I GFC ++A +
Sbjct: 376 DNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEEL 435
Query: 355 DEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCL 414
M+ G SP AT+S +V G + +L RG+ ++ + L
Sbjct: 436 FSMIEKGFSPGYATYSW-------LVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGL 488
Query: 415 IKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
I+ CK ++ A + E M G V D I+ + W KV
Sbjct: 489 IRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKV 533
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 188/407 (46%), Gaps = 12/407 (2%)
Query: 28 INKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDI 87
IN ++++F+ S G + V+++ LV + + ++M + V +
Sbjct: 149 INDSIVVFEQIR---SCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHV 205
Query: 88 LLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMR 147
+ + P A ++ +ME+ + +Y T+I + +++ A++ M
Sbjct: 206 YNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRME 265
Query: 148 KMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSV 207
+ G+ P++V+ N I + + A ++F E+ + + TY TLI+G CRM +
Sbjct: 266 RSGVAPNIVTYNSFIHGFSREGR-MREATRLFREIKD-DVTANHVTYTTLIDGYCRMNDI 323
Query: 208 SEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTL 267
EA L ME +GFSP VVTY S++ +C+ + EA RLL EM IEP+ T +TL
Sbjct: 324 DEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTL 383
Query: 268 MDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGL 327
++ CK + A+++ + M+ + +M +Y LI+G CK + A E L M +G
Sbjct: 384 INAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGF 443
Query: 328 KPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNV 387
P Y ++ GF + + ++E G+ V ++ +++ +C
Sbjct: 444 SPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCAD-------VALYRGLIRRICKLE 496
Query: 388 DSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEM 434
A L+ SM +G+ + F + + + G + +A+ + + M
Sbjct: 497 QVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVM 543
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 137/300 (45%), Gaps = 2/300 (0%)
Query: 44 NGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLD 103
+G + T+ I + R A L +K ++ T+ GY R++ +
Sbjct: 267 SGVAPNIVTYNSFIHGFSREGRMREATRLFREIK-DDVTANHVTYTTLIDGYCRMNDIDE 325
Query: 104 AIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIK 163
A+R+ ME +Y +++ L E+ ++ A EM I P ++ N LI
Sbjct: 326 ALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLIN 385
Query: 164 ALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFS 223
A CK ++ + SA+++ +M G + D Y+Y LI+G C++ + AKE M EKGFS
Sbjct: 386 AYCKIEDMV-SAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFS 444
Query: 224 PSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMEL 283
P TY+ L+ G + E +LLEE +K G+ +V Y L+ +CK A L
Sbjct: 445 PGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVL 504
Query: 284 LEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCA 343
E M K + V + T+ + GK +EA + D M + L N LY I + +
Sbjct: 505 FESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISASYAG 564
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 167/320 (52%), Gaps = 10/320 (3%)
Query: 132 EENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDS 191
+E ++ + + + G P+V L+ LCK + A+++ M + G PD+
Sbjct: 83 DEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANR-LKKAIRVIELMVSSGIIPDA 141
Query: 192 YTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEE 251
Y L+N LC+ G+V A +L +ME+ G+ + VTY +L+ G+C +L ++++ +E
Sbjct: 142 SAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVER 201
Query: 252 MKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGK 311
+ + G+ PN FTYS L++ K + +A++LL+ ++ K PN+V+Y L+ G CKEG+
Sbjct: 202 LMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGR 261
Query: 312 FSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSL 371
+A+ + + +G K N Y ++ C +++A + + EM G +PS T+
Sbjct: 262 TDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTY-- 319
Query: 372 HVRMHNTVVQGLCSNVDSPRAFQLY--LSMRTRGISIEIDTFDCLIKCFCKRGDLNKAAR 429
N ++ L + + +A Q+ +S + +++ +I CK G ++ +
Sbjct: 320 -----NILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVK 374
Query: 430 ILEEMISDGCVPDKGIWDVV 449
L+EMI C P++G ++ +
Sbjct: 375 CLDEMIYRRCKPNEGTYNAI 394
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 167/353 (47%), Gaps = 11/353 (3%)
Query: 104 AIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIK 163
A+++ KMED +Y ++ L + +++ F + + G+ P+ + + L++
Sbjct: 160 AMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLE 219
Query: 164 ALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFS 223
A K + T D A+++ E+ +G +P+ +Y L+ G C+ G +A LF E+ KGF
Sbjct: 220 AAYKERGT-DEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFK 278
Query: 224 PSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMEL 283
+VV+Y L+ +C EA LL EM P+V TY+ L++ L G + QA+++
Sbjct: 279 ANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQV 338
Query: 284 L-EMMVTKHN-RPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGF 341
L EM H R +Y +I LCKEGK V+ LD M + KPN G Y I S
Sbjct: 339 LKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGS-L 397
Query: 342 CAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRT 401
C +S A +I + S S + +V+ LC ++ AFQL M
Sbjct: 398 CEHNSKVQEAFYIIQ------SLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTR 451
Query: 402 RGISIEIDTFDCLIKCFCKRGDLNKAARILEEM-ISDGCVPDKGIWDVVMGGL 453
G + T+ LI+ C G A +L M S+ C P ++ ++ GL
Sbjct: 452 CGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGL 504
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 178/395 (45%), Gaps = 18/395 (4%)
Query: 63 ANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKS 122
++ F E L+ + N + +L +C+ +R AIRV M + +
Sbjct: 88 SDSFSHLESLVTGGHKPNVAHSTQLLYDLCKA----NRLKKAIRVIELMVSSGIIPDASA 143
Query: 123 YLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEM 182
Y +++ L + +V A+ +M G P + V+ N L++ LC +++ +LQ +
Sbjct: 144 YTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCM-LGSLNQSLQFVERL 202
Query: 183 PNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNL 242
+G P+++TY L+ + EA +L +E+ KG P++V+Y L+ G C+
Sbjct: 203 MQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRT 262
Query: 243 GEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTL 302
+A+ L E+ G + NV +Y+ L+ LC G +A LL M P++VTY L
Sbjct: 263 DDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNIL 322
Query: 303 INGLCKEGKFSEAVEILDRMRL--QGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLG 360
IN L G+ +A+++L M + A Y +I+ C +DEM+
Sbjct: 323 INSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYR 382
Query: 361 GISPSRATWSLHVRM--HNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCF 418
P+ T++ + HN+ VQ AF + S+ + D + +I
Sbjct: 383 RCKPNEGTYNAIGSLCEHNSKVQ---------EAFYIIQSLSNKQKCCTHDFYKSVITSL 433
Query: 419 CKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
C++G+ A ++L EM G PD + ++ GL
Sbjct: 434 CRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGL 468
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 140/289 (48%), Gaps = 10/289 (3%)
Query: 43 SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMK---QENCVVTEDILLTICRGYGRVH 99
+ GF+ + ++ +++ L ++ A LL M + VVT +IL+ +GR
Sbjct: 274 AKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTE 333
Query: 100 RPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLN 159
+ L ++ K + Q + T SY VI L +E V + EM P+ + N
Sbjct: 334 QALQVLKEMSK-GNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYN 392
Query: 160 ILIKALCKNKETIDSALQIFHEMPNRG--CQPDSYTYGTLINGLCRMGSVSEAKELFNEM 217
I +LC++ + A I + N+ C D Y ++I LCR G+ A +L EM
Sbjct: 393 A-IGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYK--SVITSLCRKGNTFAAFQLLYEM 449
Query: 218 EEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKN-GIEPNVFTYSTLMDGLCKGGH 276
GF P TY++LI G+C A+ +L M+++ +P V ++ ++ GLCK
Sbjct: 450 TRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRR 509
Query: 277 SLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQ 325
+ AME+ EMMV K PN TY L+ G+ E + A E+LD +RL+
Sbjct: 510 TDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLR 558
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 157/357 (43%), Gaps = 15/357 (4%)
Query: 10 PKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSA 69
P T S + + E+ ++AV + D + G + ++ V+++ + A
Sbjct: 209 PNAFTYSFLLEAAYKERGTDEAVKLLDEIIVK---GGEPNLVSYNVLLTGFCKEGRTDDA 265
Query: 70 EGLLERMKQENC---VVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTV 126
L + + VV+ +ILL GR +A + +M+ + +Y +
Sbjct: 266 MALFRELPAKGFKANVVSYNILLRCLCCDGRWE---EANSLLAEMDGGDRAPSVVTYNIL 322
Query: 127 IDILVEENHVKRAIAFYREMRKMG--IPPSVVSLNILIKALCKNKETIDSALQIFHEMPN 184
I+ L ++A+ +EM K + S N +I LCK + +D ++ EM
Sbjct: 323 INSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGK-VDLVVKCLDEMIY 381
Query: 185 RGCQPDSYTYGTLINGLCRMGS-VSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLG 243
R C+P+ TY I LC S V EA + + K + Y S+I +C+ N
Sbjct: 382 RRCKPNEGTYNA-IGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTF 440
Query: 244 EAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHN-RPNMVTYGTL 302
A +LL EM + G +P+ TYS L+ GLC G AME+L +M N +P + + +
Sbjct: 441 AAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAM 500
Query: 303 INGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVL 359
I GLCK + A+E+ + M + PN Y ++ G + A +DE+ L
Sbjct: 501 ILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRL 557
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 106/241 (43%), Gaps = 28/241 (11%)
Query: 241 NLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYG 300
NL ++ LE + G +PNV + L+ LCK +A+ ++E+MV+ P+ Y
Sbjct: 86 NLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYT 145
Query: 301 TLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLG 360
L+N LCK G A++++++M G N Y ++ G C S + F++ ++
Sbjct: 146 YLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQK 205
Query: 361 GISPSRATWSL----------------------------HVRMHNTVVQGLCSNVDSPRA 392
G++P+ T+S ++ +N ++ G C + A
Sbjct: 206 GLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDA 265
Query: 393 FQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGG 452
L+ + +G + +++ L++C C G +A +L EM P +++++
Sbjct: 266 MALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINS 325
Query: 453 L 453
L
Sbjct: 326 L 326
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 165/316 (52%), Gaps = 17/316 (5%)
Query: 145 EMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGC------QPDSYTYGTLI 198
+M ++ I P VV+L ILI LCK++ +D AL++F +M + + DS + TLI
Sbjct: 319 KMDEVKIRPDVVTLGILINTLCKSRR-VDEALEVFEQMRGKRTDDGNVIKADSIHFNTLI 377
Query: 199 NGLCRMGSVSEAKELFNEME-EKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGI 257
+GLC++G + EA+EL M+ E+ P+ VTY LI G C++ L A ++ MK++ I
Sbjct: 378 DGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEI 437
Query: 258 EPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHN-RPNMVTYGTLINGLCKEGKFSEAV 316
+PNV T +T++ G+C+ H L + M + K + N+VTY TLI+ C +A+
Sbjct: 438 KPNVVTVNTIVGGMCRH-HGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAM 496
Query: 317 EILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMH 376
++M G P+A +Y +ISG C DA ++++ GG +SL + +
Sbjct: 497 YWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG-------FSLDLLAY 549
Query: 377 NTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMIS 436
N ++ C ++ + +++ M G + T++ LI F K D R++E+M
Sbjct: 550 NMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRE 609
Query: 437 DGCVPDKGIWDVVMGG 452
DG P + V+
Sbjct: 610 DGLDPTVTTYGAVIDA 625
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 195/431 (45%), Gaps = 48/431 (11%)
Query: 10 PKQITSSLVEQLIKAEKDINKAVLMFDSATAEYS---NGFRHDHTTFGVMISRLVAANQF 66
P +T ++ + + +++A+ +F+ + + N + D F +I L +
Sbjct: 327 PDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRL 386
Query: 67 RSAEGLLERMK-QENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLT 125
+ AE LL RMK +E CV + GY R + A V +M++ ++K
Sbjct: 387 KEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIK-------- 438
Query: 126 VIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR 185
P+VV++N ++ +C++ ++ A+ F +M
Sbjct: 439 ---------------------------PNVVTVNTIVGGMCRH-HGLNMAVVFFMDMEKE 470
Query: 186 GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEA 245
G + + TY TLI+ C + +V +A + +M E G SP Y +LI G+CQ +A
Sbjct: 471 GVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDA 530
Query: 246 IRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING 305
IR++E++K+ G ++ Y+ L+ C ++ + E+L M + +P+ +TY TLI+
Sbjct: 531 IRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISF 590
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVL-GGISP 364
K F ++++MR GL P YG +I +C+ +A +M L ++P
Sbjct: 591 FGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNP 650
Query: 365 SRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDL 424
+ ++N ++ + +A L M+ + + ++T++ L KC ++
Sbjct: 651 NTV-------IYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQG 703
Query: 425 NKAARILEEMI 435
++++EM+
Sbjct: 704 ETLLKLMDEMV 714
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 185/392 (47%), Gaps = 19/392 (4%)
Query: 72 LLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILV 131
L E K++N +T + R +GR+ ++ V+ ++ D +K +Q + V+D+L+
Sbjct: 139 LYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERL-DSNMKNSQVRNV-VVDVLL 196
Query: 132 EENHVKRAIAFYREM--RKMGIPPSVVSLNILIKALCKNKE-TIDSALQIFHEMPNRGCQ 188
V A EM ++ PP+ ++ +I++ + K + T + + + + G
Sbjct: 197 RNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVS 256
Query: 189 PDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRL 248
P+S I+ LC+ + A ++ +++ + + +L+ + ++ ++ L
Sbjct: 257 PNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDL 316
Query: 249 LEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHN------RPNMVTYGTL 302
+ +M + I P+V T L++ LCK +A+E+ E M K + + + + TL
Sbjct: 317 VLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTL 376
Query: 303 INGLCKEGKFSEAVEILDRMRLQG-LKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGG 361
I+GLCK G+ EA E+L RM+L+ PNA Y +I G+C A + A + M
Sbjct: 377 IDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDE 436
Query: 362 ISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKR 421
I P+ T NT+V G+C + A ++ M G+ + T+ LI C
Sbjct: 437 IKPNVVTV-------NTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSV 489
Query: 422 GDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
++ KA E+M+ GC PD I+ ++ GL
Sbjct: 490 SNVEKAMYWYEKMLEAGCSPDAKIYYALISGL 521
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 158/350 (45%), Gaps = 36/350 (10%)
Query: 137 KRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGT 196
++ IA G+ P+ V L I +LCKN ++A I ++ ++ +
Sbjct: 241 EKIIALISRFSSHGVSPNSVWLTRFISSLCKNARA-NTAWDILSDLMKNKTPLEAPPFNA 299
Query: 197 LINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKK-- 254
L++ L R +S +L +M+E P VVT LI+ +C+S + EA+ + E+M+
Sbjct: 300 LLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKR 359
Query: 255 ----NGIEPNVFTYSTLMDGLCKGGHSLQAMELL-EMMVTKHNRPNMVTYGTLINGLCKE 309
N I+ + ++TL+DGLCK G +A ELL M + + PN VTY LI+G C+
Sbjct: 360 TDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRA 419
Query: 310 GKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATW 369
GK A E++ RM+ +KPN I+ G C A F +M G+ + T+
Sbjct: 420 GKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTY 479
Query: 370 ----------------------------SLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRT 401
S +++ ++ GLC A ++ ++
Sbjct: 480 MTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKE 539
Query: 402 RGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMG 451
G S+++ ++ LI FC + + K +L +M +G PD ++ ++
Sbjct: 540 GGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLIS 589
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/450 (25%), Positives = 208/450 (46%), Gaps = 10/450 (2%)
Query: 10 PKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSA 69
P T S+V +++KA M + E S G + T+ +I+
Sbjct: 223 PDVFTCSIVVNAYCRSGNVDKA--MVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGM 280
Query: 70 EGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDI 129
+L M + ++ +GY + +A VF +++ +L Q Y ++D
Sbjct: 281 TRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDG 340
Query: 130 LVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQP 189
++ A+ + M ++G+ + N LI CK+ + ++ A QIF M + +P
Sbjct: 341 YCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVE-AEQIFSRMNDWSLKP 399
Query: 190 DSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLL 249
D +TY TL++G CR G V EA +L ++M +K P+V+TY L+ G + + + L
Sbjct: 400 DHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLW 459
Query: 250 EEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKE 309
+ M K G+ + + STL++ L K G +AM+L E ++ + + +T +I+GLCK
Sbjct: 460 KMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKM 519
Query: 310 GKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATW 369
K +EA EILD + + KP Y + G+ + ++A + M GI P+
Sbjct: 520 EKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPT---- 575
Query: 370 SLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAAR 429
+ M+NT++ G + L + +R RG++ + T+ LI +C G ++KA
Sbjct: 576 ---IEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYA 632
Query: 430 ILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
EMI G + I + L+ K+
Sbjct: 633 TCFEMIEKGITLNVNICSKIANSLFRLDKI 662
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 165/328 (50%), Gaps = 11/328 (3%)
Query: 133 ENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR-GCQPDS 191
EN V A+ Y +M + P V + +I++ A C++ +D A+ E + G + +
Sbjct: 205 ENFV--ALHVYDQMISFEVSPDVFTCSIVVNAYCRSG-NVDKAMVFAKETESSLGLELNV 261
Query: 192 YTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEE 251
TY +LING +G V + M E+G S +VVTYTSLI G C+ + EA + E
Sbjct: 262 VTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFEL 321
Query: 252 MKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGK 311
+K+ + + Y LMDG C+ G A+ + + M+ R N +LING CK G+
Sbjct: 322 LKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQ 381
Query: 312 FSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSL 371
EA +I RM LKP+ Y ++ G+C A +A D+M + P+ T+++
Sbjct: 382 LVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNI 441
Query: 372 HVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARIL 431
++ ++ + G +V L+ M RG++ + + L++ K GD N+A ++
Sbjct: 442 LLKGYSRI--GAFHDV-----LSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLW 494
Query: 432 EEMISDGCVPDKGIWDVVMGGLWDRKKV 459
E +++ G + D +V++ GL +KV
Sbjct: 495 ENVLARGLLTDTITLNVMISGLCKMEKV 522
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 115/506 (22%), Positives = 205/506 (40%), Gaps = 101/506 (19%)
Query: 49 DHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVF 108
D +GV++ Q R A + + M + I ++ GY + + ++A ++F
Sbjct: 330 DQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIF 389
Query: 109 HKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCK- 167
+M D+ LK +Y T++D +V A+ +M + + P+V++ NIL+K +
Sbjct: 390 SRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRI 449
Query: 168 ------------------NKETI---------------DSALQIFHEMPNRGCQPDSYTY 194
N + I + A++++ + RG D+ T
Sbjct: 450 GAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITL 509
Query: 195 GTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKK 254
+I+GLC+M V+EAKE+ + + P+V TY +L HG + NL EA + E M++
Sbjct: 510 NVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMER 569
Query: 255 NGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSE 314
GI P + Y+TL+ G K H + +L+ + + P + TYG LI G C G +
Sbjct: 570 KGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDK 629
Query: 315 AVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMV-----------LGGIS 363
A M +G+ N + KI + +A + ++V L
Sbjct: 630 AYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFL 689
Query: 364 PSRATWSLHVR--------------------MHNTVVQGLCSN---VDSPRAFQLYLS-- 398
+ AT L + ++N + GLC D+ + F LS
Sbjct: 690 EASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSD 749
Query: 399 -------------------------------MRTRGISIEIDTFDCLIKCFCKRGDLNKA 427
M +GI I T++ LIK CK G++++A
Sbjct: 750 RFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRA 809
Query: 428 ARILEEMISDGCVPDKGIWDVVMGGL 453
R+L ++ G P+ ++ ++ GL
Sbjct: 810 QRLLHKLPQKGITPNAITYNTLIDGL 835
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 196/455 (43%), Gaps = 40/455 (8%)
Query: 15 SSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLE 74
S+L+E L K D N+A+ ++++ A G D T VMIS L + A+ +L+
Sbjct: 475 STLLEALFKL-GDFNEAMKLWENVLAR---GLLTDTITLNVMISGLCKMEKVNEAKEILD 530
Query: 75 RMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEEN 134
+ C + GY +V +A V ME + T + Y T+I +
Sbjct: 531 NVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYR 590
Query: 135 HVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTY 194
H+ + E+R G+ P+V + LI C N ID A EM +G +
Sbjct: 591 HLNKVADLVIELRARGLTPTVATYGALITGWC-NIGMIDKAYATCFEMIEKGITLNVNIC 649
Query: 195 GTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGM-------CQSDNLGEAIR 247
+ N L R+ + EA L ++ + F + Y SL + ++ + E++
Sbjct: 650 SKIANSLFRLDKIDEACLLLQKIVD--FDLLLPGYQSLKEFLEASATTCLKTQKIAESVE 707
Query: 248 LLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL-EMMVTKHNRPNMVTYGTLINGL 306
K + PN Y+ + GLCK G A +L +++ + P+ TY LI+G
Sbjct: 708 --NSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGC 765
Query: 307 CKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSR 366
G ++A + D M L+G+ PN Y +I G C + A + ++ GI+P+
Sbjct: 766 AIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNA 825
Query: 367 ATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNK 426
T+ NT++ GL + + A +L M +G L++ K+GD++
Sbjct: 826 ITY-------NTLIDGLVKSGNVAEAMRLKEKMIEKG----------LVRGSDKQGDVD- 867
Query: 427 AARILEEMISDGCVP--DKGIWDVVMGGLWDRKKV 459
I +E++ D V G+ ++ L+D ++V
Sbjct: 868 ---IPKEVVLDPEVKLGSTGVIEMNSNELYDVRRV 899
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 137/319 (42%), Gaps = 29/319 (9%)
Query: 143 YREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFH-EMPNRGCQPDSYTYGTLINGL 201
Y + + + S LN +++ L N E + L+IF+ + +PD Y +++ L
Sbjct: 58 YEALHDLSLDFSDELLNSILRRLRLNPE---ACLEIFNLASKQQKFRPDYKAYCKMVHIL 114
Query: 202 CRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNV 261
R + + K E+ S VV GE +R+ +E P V
Sbjct: 115 SRARNYQQTKSYLCELVALNHSGFVV--------------WGELVRVFKEF---SFSPTV 157
Query: 262 FTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDR 321
F ++ + G A+ + + M P++++ +L++ L ++G+ A+ + D+
Sbjct: 158 F--DMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQ 215
Query: 322 MRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQ 381
M + P+ +++ +C + + A F E + S L+V +N+++
Sbjct: 216 MISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKE------TESSLGLELNVVTYNSLIN 269
Query: 382 GLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVP 441
G D ++ M RG+S + T+ LIK +CK+G + +A + E + V
Sbjct: 270 GYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVA 329
Query: 442 DKGIWDVVMGGLWDRKKVR 460
D+ ++ V+M G ++R
Sbjct: 330 DQHMYGVLMDGYCRTGQIR 348
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 195/420 (46%), Gaps = 17/420 (4%)
Query: 18 VEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMK 77
+ +LI +K + A+ F A+ GF H +T+ + +L +F + LL+ M
Sbjct: 46 IVRLILDQKSASGALETFRWAST--FPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMP 103
Query: 78 QENCVVTED-ILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHV 136
+ +D I +TI RG+GR I V + F +K + K + +++D+LV+E+
Sbjct: 104 DSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDID 163
Query: 137 KRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGT 196
F R+M GI V + IL+K L I ++ M G P++ Y T
Sbjct: 164 IAREFFTRKMMASGIHGDVYTYGILMKGLSLTNR-IGDGFKLLQIMKTSGVAPNAVVYNT 222
Query: 197 LINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNG 256
L++ LC+ G V A+ L +EM+E P+ VT+ LI C L +++ LLE+ G
Sbjct: 223 LLHALCKNGKVGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLG 278
Query: 257 IEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAV 316
P+V T + +M+ LC G +A+E+LE + +K + ++V TL+ G C GK A
Sbjct: 279 FVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQ 338
Query: 317 EILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMH 376
M +G PN Y +I+G+C A + ++M I + AT+
Sbjct: 339 RFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATF------- 391
Query: 377 NTVVQGLCSNVDSPRAFQLYLSMRTRGI--SIEIDTFDCLIKCFCKRGDLNKAARILEEM 434
NT+++GL + ++ M+ ID ++C+I F K A L +M
Sbjct: 392 NTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKM 451
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/481 (24%), Positives = 208/481 (43%), Gaps = 65/481 (13%)
Query: 12 QITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEG 71
++ +S+++ L+K + DI + ++G D T+G+++ L N+
Sbjct: 148 KVFNSILDVLVKEDIDIAREFF----TRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFK 203
Query: 72 LLERMKQE----NCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVI 127
LL+ MK N VV +L +C+ G+V R + + D +Y
Sbjct: 204 LLQIMKTSGVAPNAVVYNTLLHALCKN-GKVGRARSLMSEMKEPNDVTFNILISAY---- 258
Query: 128 DILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGC 187
E + +++ + +G P VV++ +++ LC N+ + AL++ + ++G
Sbjct: 259 ---CNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLC-NEGRVSEALEVLERVESKGG 314
Query: 188 QPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIR 247
+ D TL+ G C +G + A+ F EME KG+ P+V TY LI G C L A+
Sbjct: 315 KVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALD 374
Query: 248 LLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMV---TKHNRPNMVTYGTLIN 304
+MK + I N T++TL+ GL GG + +++LEMM T H + Y +I
Sbjct: 375 TFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHG-ARIDPYNCVIY 433
Query: 305 GLCKEGKFSEAVEILDRMRLQGLKPNA-----------------------------GLYG 335
G KE ++ +A+E L ++++ L P A G
Sbjct: 434 GFYKENRWEDALEFL--LKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVP 491
Query: 336 KIISGFCAASSY------QDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDS 389
II C Y +++ I++MV G P +T+ N V+ G C
Sbjct: 492 SIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTF-------NAVIIGFCKQDKV 544
Query: 390 PRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVV 449
+ M RG + ++++ L++ C +GD+ KA + M+ VPD +W +
Sbjct: 545 MNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSL 604
Query: 450 M 450
M
Sbjct: 605 M 605
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/292 (19%), Positives = 123/292 (42%), Gaps = 33/292 (11%)
Query: 193 TYGTLINGLCRMGSVSEAKELFNEMEEK-GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEE 251
TY L + LC +L +EM + G P + ++I G ++ + I +++
Sbjct: 78 TYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDL 137
Query: 252 MKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGK 311
+ K GI+P++ +++++D L K + M+ ++ TYG L+ GL +
Sbjct: 138 VSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNR 197
Query: 312 FSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSL 371
+ ++L M+ G+ PNA +Y ++ C A + + EM P+ T+++
Sbjct: 198 IGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNI 253
Query: 372 HVRMH----------------------------NTVVQGLCSNVDSPRAFQLYLSMRTRG 403
+ + V++ LC+ A ++ + ++G
Sbjct: 254 LISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKG 313
Query: 404 ISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWD 455
+++ + L+K +C G + A R EM G +P+ +++++ G D
Sbjct: 314 GKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCD 365
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 154/372 (41%), Gaps = 41/372 (11%)
Query: 8 KWPKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFR 67
K P +T +++ E+ + +++++ + +S GF D T ++ L +
Sbjct: 244 KEPNDVTFNILISAYCNEQKLIQSMVLLEKC---FSLGFVPDVVTVTKVMEVLCNEGRVS 300
Query: 68 SAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVI 127
A +LER++ + V T+ +GY + + A R F +ME ++Y +I
Sbjct: 301 EALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLI 360
Query: 128 DILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPN--- 184
+ + A+ + +M+ I + + N LI+ L T D L+I M +
Sbjct: 361 AGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRT-DDGLKILEMMQDSDT 419
Query: 185 -RGCQPDSYT---YGTL----------------------------INGLCRMGSVSEAKE 212
G + D Y YG + LC G + + K
Sbjct: 420 VHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKT 479
Query: 213 LFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLC 272
+++M +G PS++ LIH Q + E++ L+ +M G P T++ ++ G C
Sbjct: 480 AYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFC 539
Query: 273 KGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAG 332
K + ++ +E M + P+ +Y L+ LC +G +A + RM + + P+
Sbjct: 540 KQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPS 599
Query: 333 LYGKIISGFCAA 344
++ ++ FC +
Sbjct: 600 MWSSLM--FCLS 609
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 95/244 (38%), Gaps = 40/244 (16%)
Query: 34 MFDSATAEY----SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILL 89
M DSA + ++ R + TF +I L + +LE M+ + V I
Sbjct: 368 MLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDP 427
Query: 90 TICRGYG--RVHRPLDAIRVFHKMEDFQLKFTQKSYL--------------TVIDILVEE 133
C YG + +R DA+ KME + +S+ T D ++ E
Sbjct: 428 YNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGE 487
Query: 134 NHV-------------------KRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDS 174
V + ++ +M G P + N +I CK + ++
Sbjct: 488 GGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMN- 546
Query: 175 ALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIH 234
++ +M RGC PD+ +Y L+ LC G + +A LF+ M EK P ++SL+
Sbjct: 547 GIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMF 606
Query: 235 GMCQ 238
+ Q
Sbjct: 607 CLSQ 610
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 200/452 (44%), Gaps = 47/452 (10%)
Query: 10 PKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSA 69
P T S V + + A L+F+ G D T+ +M+ A A
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMK---RGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 70 EGLLERMKQENC---VVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQK----- 121
M++ C VVT L +H L A +V + E F+ ++
Sbjct: 538 RKWFNEMREVGCTPNVVTYTAL---------IHAYLKAKKVSYANELFETMLSEGCLPNI 588
Query: 122 -SYLTVIDILVEENHVKRAIAFYREM-RKMGIP---------------PSVVSLNILIKA 164
+Y +ID + V++A + M +P P+VV+ L+
Sbjct: 589 VTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDG 648
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
CK+ ++ A ++ M GC+P+ Y LI+GLC++G + EA+E+ EM E GF
Sbjct: 649 FCKSHR-VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPA 707
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
++ TY+SLI + A ++L +M +N PNV Y+ ++DGLCK G + +A +L+
Sbjct: 708 TLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM 767
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAA 344
+MM K +PN+VTY +I+G GK +E+L+RM +G+ PN Y +I C
Sbjct: 768 QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKN 827
Query: 345 SSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGI 404
+ A N ++EM + W H + V++G N + + L +
Sbjct: 828 GALDVAHNLLEEM-------KQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDT 878
Query: 405 SIEIDTFDCLIKCFCKRGDLNKAARILEEMIS 436
+ + + LI K L A R+LEE+ +
Sbjct: 879 APFLSVYRLLIDNLIKAQRLEMALRLLEEVAT 910
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 199/443 (44%), Gaps = 35/443 (7%)
Query: 10 PKQIT-SSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRS 68
P +T ++L+ +KA+K ++ A +F++ +E G + T+ +I A Q
Sbjct: 551 PNVVTYTALIHAYLKAKK-VSYANELFETMLSE---GCLPNIVTYSALIDGHCKAGQVEK 606
Query: 69 AEGLLERM-------------------KQENCVVTEDILLTICRGYGRVHRPLDAIRVFH 109
A + ERM + VVT LL G+ + HR +A ++
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLD---GFCKSHRVEEARKLLD 663
Query: 110 KMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNK 169
M + Q Y +ID L + + A EM + G P ++ + + LI K K
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK 723
Query: 170 ETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTY 229
D A ++ +M C P+ Y +I+GLC++G EA +L MEEKG P+VVTY
Sbjct: 724 RQ-DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTY 782
Query: 230 TSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVT 289
T++I G + + LLE M G+ PN TY L+D CK G A LLE M
Sbjct: 783 TAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 842
Query: 290 KHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQD 349
H + Y +I G KE F E++ +LD + P +Y +I A +
Sbjct: 843 THWPTHTAGYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEM 900
Query: 350 AANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEID 409
A ++E ++ AT + +N++++ LC AFQL+ M +G+ E+
Sbjct: 901 ALRLLEE-----VATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQ 955
Query: 410 TFDCLIKCFCKRGDLNKAARILE 432
+F LIK + +++A +L+
Sbjct: 956 SFCSLIKGLFRNSKISEALLLLD 978
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 178/419 (42%), Gaps = 37/419 (8%)
Query: 43 SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENC---VVTEDILLTICRGYGRVH 99
+ F D + +IS L A+ F A L RM+ +C VVT LL C ++
Sbjct: 295 TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLG 354
Query: 100 RPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLN 159
R RV + M + K + +++ A ++M K G P V N
Sbjct: 355 R---CKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYN 411
Query: 160 ILIKALCKNKETI-----DSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELF 214
ILI ++C +K+++ D A + + EM G + + LC G +A +
Sbjct: 412 ILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVI 471
Query: 215 NEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKG 274
EM +GF P TY+ +++ +C + + A L EEMK+ G+ +V+TY+ ++D CK
Sbjct: 472 REMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA 531
Query: 275 GHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLY 334
G QA + M PN+VTY LI+ K K S A E+ + M +G PN Y
Sbjct: 532 GLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTY 591
Query: 335 GKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQ 394
+I G C A + A + M C + D P
Sbjct: 592 SALIDGHCKAGQVEKACQIFERM--------------------------CGSKDVPDVDM 625
Query: 395 LYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
+ + T+ L+ FCK + +A ++L+ M +GC P++ ++D ++ GL
Sbjct: 626 YFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 684
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/462 (22%), Positives = 207/462 (44%), Gaps = 19/462 (4%)
Query: 4 RTLFKWPKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAA 63
+ L ++ ++++ SLV ++++ + + F A + G++H + ++ +V
Sbjct: 121 KFLRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQI--GYKHTAPVYNALVDLIVRD 178
Query: 64 NQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSY 123
+ + E L++++ ++ V + L + R + R A+ +++DF+ + ++ +Y
Sbjct: 179 DDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTY 238
Query: 124 LTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMP 183
+I ++ + + A +REM + +L +LCK + + +
Sbjct: 239 NCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCK----VGKWREALTLVE 294
Query: 184 NRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLG 243
PD+ Y LI+GLC EA + N M P+VVTY++L+ G LG
Sbjct: 295 TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLG 354
Query: 244 EAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLI 303
R+L M G P+ +++L+ C G A +LL+ MV + P V Y LI
Sbjct: 355 RCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILI 414
Query: 304 NGLC--KEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGF----CAASSYQDAANFIDEM 357
+C K+ + +++ ++ + L L +S F C+A Y+ A + I EM
Sbjct: 415 GSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREM 474
Query: 358 VLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKC 417
+ G P +T+S V+ LC+ AF L+ M+ G+ ++ T+ ++
Sbjct: 475 IGQGFIPDTSTYS-------KVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDS 527
Query: 418 FCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
FCK G + +A + EM GC P+ + ++ KKV
Sbjct: 528 FCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKV 569
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 160/397 (40%), Gaps = 62/397 (15%)
Query: 110 KMEDFQLKFTQK-SYLTVIDILVEENHVKRAIAFYREM-RKMGIPPSVVSLNILIKALCK 167
K + F +F +K S VI++L I+F+ R++G + N L+ + +
Sbjct: 118 KSQKFLRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVR 177
Query: 168 NKETIDSALQIFHEMPNRGCQPDSYTYGTLINGL----CRMGSVSEAKELFNEMEEKGFS 223
+ + ++ E + D +G +N L CR GS S A E +++ F
Sbjct: 178 DDDE-----KVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFR 232
Query: 224 PSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMEL 283
PS TY LI ++D L A + EM + + FT LCK G +A+ L
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292
Query: 284 LEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMR-------------------- 323
+E T++ P+ V Y LI+GLC+ F EA++ L+RMR
Sbjct: 293 VE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349
Query: 324 ---------------LQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRAT 368
++G P+ ++ ++ +C + + A + +MV G P
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVV 409
Query: 369 WSLHVRMHNTVVQGLCSNVDSPR------AFQLYLSMRTRGISIEIDTFDCLIKCFCKRG 422
+ N ++ +C + DS A + Y M G+ + +C C G
Sbjct: 410 Y-------NILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAG 462
Query: 423 DLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
KA ++ EMI G +PD + V+ L + K+
Sbjct: 463 KYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKM 499
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 129/316 (40%), Gaps = 45/316 (14%)
Query: 10 PKQIT-SSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRS 68
P QI +L++ L K K +++A + T +GF T+ +I R +
Sbjct: 672 PNQIVYDALIDGLCKVGK-LDEAQ---EVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDL 727
Query: 69 AEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVID 128
A +L +M + +C I + G +V + +A ++ ME+ + +Y +ID
Sbjct: 728 ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 787
Query: 129 ILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKN-------------------- 168
++ + M G+ P+ V+ +LI CKN
Sbjct: 788 GFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPT 847
Query: 169 -------------KETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFN 215
KE I+S L + E+ P Y LI+ L + + A L
Sbjct: 848 HTAGYRKVIEGFNKEFIES-LGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLE 906
Query: 216 EMEEKGFSPSVV----TYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGL 271
E+ FS ++V TY SLI +C ++ + A +L EM K G+ P + ++ +L+ GL
Sbjct: 907 EV--ATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGL 964
Query: 272 CKGGHSLQAMELLEMM 287
+ +A+ LL+ +
Sbjct: 965 FRNSKISEALLLLDFI 980
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 179/393 (45%), Gaps = 25/393 (6%)
Query: 14 TSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLL 73
T S V L D A L F + N F+H+ T++ +++ L+ + + +
Sbjct: 26 TPSHVSSLFSLNLDPQTA-LSFSDWISRIPN-FKHNVTSYASLVT-LLCSQEIPYEVPKI 82
Query: 74 ERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKF--TQKSYLTVIDILV 131
+ ++C D L + D R K + F++K+ T K Y ++ L
Sbjct: 83 TILMIKSCNSVRDALFVV-----------DFCRTMRKGDSFEIKYKLTPKCYNNLLSSLA 131
Query: 132 EENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDS 191
V+ Y EM + + P + + N L+ CK ++ A Q + GC PD
Sbjct: 132 RFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVE-AKQYVTWLIQAGCDPDY 190
Query: 192 YTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEE 251
+TY + I G CR V A ++F EM + G + V+YT LI+G+ ++ + EA+ LL +
Sbjct: 191 FTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVK 250
Query: 252 MKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGK 311
MK + PNV TY+ L+D LC G +AM L + M +P+ Y LI C
Sbjct: 251 MKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDT 310
Query: 312 FSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSL 371
EA +L+ M GL PN Y +I GFC + ++ A + +M+ + P T+
Sbjct: 311 LDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHK-AMGLLSKMLEQNLVPDLITY-- 367
Query: 372 HVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGI 404
NT++ G CS+ + A++L M G+
Sbjct: 368 -----NTLIAGQCSSGNLDSAYRLLSLMEESGL 395
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 142/267 (53%), Gaps = 8/267 (2%)
Query: 177 QIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGM 236
+++ EM PD YT+ TL+NG C++G V EAK+ + + G P TYTS I G
Sbjct: 141 RLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGH 200
Query: 237 CQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNM 296
C+ + A ++ +EM +NG N +Y+ L+ GL + +A+ LL M + PN+
Sbjct: 201 CRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNV 260
Query: 297 VTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDE 356
TY LI+ LC G+ SEA+ + +M G+KP+ +Y +I FC+ + +A+ ++
Sbjct: 261 RTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEH 320
Query: 357 MVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIK 416
M+ G+ P+ T+ N +++G C + +A L M + + ++ T++ LI
Sbjct: 321 MLENGLMPNVITY-------NALIKGFCKK-NVHKAMGLLSKMLEQNLVPDLITYNTLIA 372
Query: 417 CFCKRGDLNKAARILEEMISDGCVPDK 443
C G+L+ A R+L M G VP++
Sbjct: 373 GQCSSGNLDSAYRLLSLMEESGLVPNQ 399
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 126/259 (48%), Gaps = 8/259 (3%)
Query: 194 YGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMK 253
Y L++ L R G V E K L+ EM E SP + T+ +L++G C+ + EA + + +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 254 KNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFS 313
+ G +P+ FTY++ + G C+ A ++ + M N V+Y LI GL + K
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 314 EAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHV 373
EA+ +L +M+ PN Y +I C + +A N +M GI P
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDC------ 296
Query: 374 RMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEE 433
M+ ++Q CS A L M G+ + T++ LIK FCK+ +++KA +L +
Sbjct: 297 -MYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKK-NVHKAMGLLSK 354
Query: 434 MISDGCVPDKGIWDVVMGG 452
M+ VPD ++ ++ G
Sbjct: 355 MLEQNLVPDLITYNTLIAG 373
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 2/216 (0%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
G D+ T+ I+ + +A + + M Q C E + G + +A
Sbjct: 185 GCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEA 244
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
+ + KM+D ++Y +ID L A+ +++M + GI P +LI++
Sbjct: 245 LSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQS 304
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
C +T+D A + M G P+ TY LI G C+ +V +A L ++M E+ P
Sbjct: 305 FCSG-DTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVP 362
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPN 260
++TY +LI G C S NL A RLL M+++G+ PN
Sbjct: 363 DLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 190/404 (47%), Gaps = 10/404 (2%)
Query: 52 TFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILL-TICRGYGRVHRPLDAIRVFHK 110
TF V+++ + A G+LERM E V +++ TI + + R D +
Sbjct: 206 TFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLD 265
Query: 111 MEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKE 170
M+ L + +Y ++ + +K A M++ + P + + NILI LC N
Sbjct: 266 MKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLC-NAG 324
Query: 171 TIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYT 230
++ L++ M + QPD TY TLI+G +G EA++L +ME G + VT+
Sbjct: 325 SMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHN 384
Query: 231 SLIHGMCQSDNLGEAIRLLEEM-KKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVT 289
+ +C+ + R ++E+ +G P++ TY TL+ K G A+E++ M
Sbjct: 385 ISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQ 444
Query: 290 KHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQD 349
K + N +T T+++ LCKE K EA +L+ +G + YG +I GF +
Sbjct: 445 KGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEK 504
Query: 350 AANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEID 409
A DEM I+P+ +T+ N+++ GLC + + A + + + G+ +
Sbjct: 505 ALEMWDEMKKVKITPTVSTF-------NSLIGGLCHHGKTELAMEKFDELAESGLLPDDS 557
Query: 410 TFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
TF+ +I +CK G + KA E I PD ++++ GL
Sbjct: 558 TFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGL 601
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 193/380 (50%), Gaps = 16/380 (4%)
Query: 86 DILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILV---EENHVKRAIAF 142
DI L+ Y +P A+++F KM +LK + T++ LV + A
Sbjct: 135 DIALS---AYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREV 191
Query: 143 YREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR-GCQPDSYTYGTLINGL 201
+ +M K+G+ +V + N+L+ C + ++ AL + M + PD+ TY T++ +
Sbjct: 192 FDDMVKIGVSLNVQTFNVLVNGYCLEGK-LEDALGMLERMVSEFKVNPDNVTYNTILKAM 250
Query: 202 CRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNV 261
+ G +S+ KEL +M++ G P+ VTY +L++G C+ +L EA +++E MK+ + P++
Sbjct: 251 SKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDL 310
Query: 262 FTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDR 321
TY+ L++GLC G + +EL++ M + +P++VTY TLI+G + G EA +++++
Sbjct: 311 CTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQ 370
Query: 322 MRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMV-LGGISPSRATWSLHVRMHNTVV 380
M G+K N + + C + + E+V + G SP T+ +T++
Sbjct: 371 MENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTY-------HTLI 423
Query: 381 QGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCV 440
+ D A ++ M +GI + T + ++ CK L++A +L G +
Sbjct: 424 KAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFI 483
Query: 441 PDKGIWDVVMGGLWDRKKVR 460
D+ + ++ G + +KV
Sbjct: 484 VDEVTYGTLIMGFFREEKVE 503
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 173/366 (47%), Gaps = 44/366 (12%)
Query: 49 DHTTFGVMISRLVAANQFRSAEGLLERMKQ---ENCVVTEDILLTICRGYGRVHRPLDAI 105
D T+ ++I+ L A R L++ MK + VVT + L+ C G L+A
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGL---SLEAR 365
Query: 106 RVFHKMEDFQLKFTQKS------------------------------------YLTVIDI 129
++ +ME+ +K Q + Y T+I
Sbjct: 366 KLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKA 425
Query: 130 LVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQP 189
++ + A+ REM + GI + ++LN ++ ALCK ++ +D A + + RG
Sbjct: 426 YLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERK-LDEAHNLLNSAHKRGFIV 484
Query: 190 DSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLL 249
D TYGTLI G R V +A E+++EM++ +P+V T+ SLI G+C A+
Sbjct: 485 DEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKF 544
Query: 250 EEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKE 309
+E+ ++G+ P+ T+++++ G CK G +A E + +P+ T L+NGLCKE
Sbjct: 545 DELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKE 604
Query: 310 GKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATW 369
G +A+ + + ++ + + Y +IS FC ++A + + EM G+ P R T+
Sbjct: 605 GMTEKALNFFNTL-IEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTY 663
Query: 370 SLHVRM 375
+ + +
Sbjct: 664 NSFISL 669
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 136/283 (48%), Gaps = 12/283 (4%)
Query: 44 NGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQE----NCVVTEDILLTICRGYGRVH 99
+GF D T+ +I + A ++ M Q+ N + IL +C+
Sbjct: 410 HGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCK-----E 464
Query: 100 RPLD-AIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSL 158
R LD A + + + +Y T+I E V++A+ + EM+K+ I P+V +
Sbjct: 465 RKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTF 524
Query: 159 NILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEME 218
N LI LC + +T + A++ F E+ G PD T+ ++I G C+ G V +A E +NE
Sbjct: 525 NSLIGGLCHHGKT-ELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESI 583
Query: 219 EKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSL 278
+ F P T L++G+C+ +A+ + + E + TY+T++ CK
Sbjct: 584 KHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLK 642
Query: 279 QAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDR 321
+A +LL M K P+ TY + I+ L ++GK SE E+L +
Sbjct: 643 EAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK 685
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 117/274 (42%), Gaps = 28/274 (10%)
Query: 25 EKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVT 84
E+ +++A + +SA + GF D T+G +I + A + + MK+ T
Sbjct: 464 ERKLDEAHNLLNSA---HKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPT 520
Query: 85 EDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYR 144
++ G + A+ F ++ + L ++ ++I +E V++A FY
Sbjct: 521 VSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYN 580
Query: 145 EMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRM 204
E K P + NIL+ LCK T + AL F+ + + D+ TY T+I+ C+
Sbjct: 581 ESIKHSFKPDNYTCNILLNGLCKEGMT-EKALNFFNTLIEER-EVDTVTYNTMISAFCKD 638
Query: 205 GSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLE-------------- 250
+ EA +L +EMEEKG P TY S I + + L E LL+
Sbjct: 639 KKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQ 698
Query: 251 -EMKKNG--------IEPNVFTYSTLMDGLCKGG 275
E +KN + YS ++D LC G
Sbjct: 699 VETEKNPATSESKEELNTEAIAYSDVIDELCSRG 732
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 164/331 (49%), Gaps = 8/331 (2%)
Query: 44 NGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLD 103
NG + D F +I+ + A + E+MK+ C T T+ +GYG++ + +
Sbjct: 383 NGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEE 442
Query: 104 AIRVFHKM-EDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
+ R+ M D L+ ++ ++ + ++ A +M+ G+ P VV+ N L
Sbjct: 443 SSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLA 502
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF 222
KA + T + I M + +P+ T GT++NG C G + EA F M+E G
Sbjct: 503 KAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGV 562
Query: 223 SPSVVTYTSLIHGMCQ---SDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQ 279
P++ + SLI G D +GE + L+EE G++P+V T+STLM+ G +
Sbjct: 563 HPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEF---GVKPDVVTFSTLMNAWSSVGDMKR 619
Query: 280 AMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIIS 339
E+ M+ P++ + L G + G+ +A +IL++MR G++PN +Y +IIS
Sbjct: 620 CEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIIS 679
Query: 340 GFCAASSYQDAANFIDEMV-LGGISPSRATW 369
G+C+A + A +M + G+SP+ T+
Sbjct: 680 GWCSAGEMKKAMQVYKKMCGIVGLSPNLTTY 710
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 169/368 (45%), Gaps = 43/368 (11%)
Query: 121 KSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKE---------- 170
+S +++ L+E + A + + + + G PS+++ L+ AL + K
Sbjct: 320 RSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISK 379
Query: 171 ------------------------TIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGS 206
+D A++IF +M GC+P + T+ TLI G ++G
Sbjct: 380 VEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGK 439
Query: 207 VSEAKELFNEM-EEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYS 265
+ E+ L + M ++ P+ T L+ C + EA ++ +M+ G++P+V T++
Sbjct: 440 LEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFN 499
Query: 266 TLMDGLCKGGHSLQAMEL-LEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRL 324
TL + G + A ++ + M+ +PN+ T GT++NG C+EGK EA+ RM+
Sbjct: 500 TLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKE 559
Query: 325 QGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLC 384
G+ PN ++ +I GF + +D M G+ P T+S T++
Sbjct: 560 LGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFS-------TLMNAWS 612
Query: 385 SNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKG 444
S D R ++Y M GI +I F L K + + G+ KA +IL +M G P+
Sbjct: 613 SVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVV 672
Query: 445 IWDVVMGG 452
I+ ++ G
Sbjct: 673 IYTQIISG 680
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/402 (21%), Positives = 175/402 (43%), Gaps = 56/402 (13%)
Query: 100 RPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLN 159
RP +A +F+ + + K + +Y T++ L + H ++ ++ K G+ P + N
Sbjct: 334 RPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFN 393
Query: 160 ILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFN---- 215
+I A ++ +D A++IF +M GC+P + T+ TLI G ++G + E+ L +
Sbjct: 394 AIINASSESG-NLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLR 452
Query: 216 --------------------------------EMEEKGFSPSVVTYTSL------IHGMC 237
+M+ G P VVT+ +L I C
Sbjct: 453 DEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTC 512
Query: 238 QSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMV 297
++++ ++ M N ++PNV T T+++G C+ G +A+ M PN+
Sbjct: 513 TAEDM-----IIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLF 567
Query: 298 TYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEM 357
+ +LI G E++D M G+KP+ + +++ + + + +M
Sbjct: 568 VFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDM 627
Query: 358 VLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKC 417
+ GGI P +S+ + +G + +A Q+ MR G+ + + +I
Sbjct: 628 LEGGIDPDIHAFSI-------LAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISG 680
Query: 418 FCKRGDLNKAARILEEMIS-DGCVPDKGIWDVVMGGLWDRKK 458
+C G++ KA ++ ++M G P+ ++ ++ G + K+
Sbjct: 681 WCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQ 722
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 137/282 (48%), Gaps = 5/282 (1%)
Query: 64 NQFRSAEGLLERMKQENCVVTEDILL--TICRGYGRVHRPLDA-IRVFHKMEDFQLKFTQ 120
NQ + E K ++ V D++ T+ + Y R+ A + +M ++K
Sbjct: 472 NQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNV 531
Query: 121 KSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFH 180
++ T+++ EE ++ A+ F+ M+++G+ P++ N LIK N +D ++
Sbjct: 532 RTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFL-NINDMDGVGEVVD 590
Query: 181 EMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSD 240
M G +PD T+ TL+N +G + +E++ +M E G P + ++ L G ++
Sbjct: 591 LMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAG 650
Query: 241 NLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHN-RPNMVTY 299
+A ++L +M+K G+ PNV Y+ ++ G C G +AM++ + M PN+ TY
Sbjct: 651 EPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTY 710
Query: 300 GTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGF 341
TLI G + + +A E+L M + + P I G+
Sbjct: 711 ETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGW 752
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 121/265 (45%), Gaps = 3/265 (1%)
Query: 43 SNGFRHDHTTFGVMISRLVAANQFRSAEGLL-ERMKQENCVVTEDILLTICRGYGRVHRP 101
S G + D TF + +AE ++ RM TI GY +
Sbjct: 488 SYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKM 547
Query: 102 LDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNIL 161
+A+R F++M++ + + ++I + N + M + G+ P VV+ + L
Sbjct: 548 EEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTL 607
Query: 162 IKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKG 221
+ A + + +I+ +M G PD + + L G R G +A+++ N+M + G
Sbjct: 608 MNAWSSVGD-MKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFG 666
Query: 222 FSPSVVTYTSLIHGMCQSDNLGEAIRLLEEM-KKNGIEPNVFTYSTLMDGLCKGGHSLQA 280
P+VV YT +I G C + + +A+++ ++M G+ PN+ TY TL+ G + +A
Sbjct: 667 VRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKA 726
Query: 281 MELLEMMVTKHNRPNMVTYGTLING 305
ELL+ M K+ P T + +G
Sbjct: 727 EELLKDMEGKNVVPTRKTMQLIADG 751
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 104/219 (47%), Gaps = 9/219 (4%)
Query: 226 VVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLE 285
V + T L++G+ + EA + + + G +P++ TY+TL+ L + H + L+
Sbjct: 319 VRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLIS 378
Query: 286 MMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAAS 345
+ +P+ + + +IN + G +A++I ++M+ G KP A + +I G+
Sbjct: 379 KVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIG 438
Query: 346 SYQDAANFIDEMVLGG-ISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGI 404
++++ +D M+ + P+ R N +VQ C+ A+ + M++ G+
Sbjct: 439 KLEESSRLLDMMLRDEMLQPND-------RTCNILVQAWCNQRKIEEAWNIVYKMQSYGV 491
Query: 405 SIEIDTFDCLIKCFCKRGDLNKAAR-ILEEMISDGCVPD 442
++ TF+ L K + + G A I+ M+ + P+
Sbjct: 492 KPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPN 530
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 178/392 (45%), Gaps = 45/392 (11%)
Query: 48 HDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRV 107
H + M+ L QF + GL+E M++EN + E L
Sbjct: 145 HSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPEL------------------- 185
Query: 108 FHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCK 167
++ ++ + VK+AI EM K G P L+ ALCK
Sbjct: 186 ---------------FVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCK 230
Query: 168 NKETIDSALQIFHEMPNRGCQPDSYTYGT-LINGLCRMGSVSEAKELFNEMEEKGFSPSV 226
+ D+A ++F +M R P + Y T L+ G CR+G + EAK + +M E GF P +
Sbjct: 231 HGSVKDAA-KLFEDMRMRF--PVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDI 287
Query: 227 VTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEM 286
V YT+L+ G + + +A LL +M++ G EPN Y+ L+ LCK +AM++
Sbjct: 288 VDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVE 347
Query: 287 MVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASS 346
M ++VTY L++G CK GK + +LD M +GL P+ Y I+ S
Sbjct: 348 MERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKES 407
Query: 347 YQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISI 406
+++ +++M P + ++N V++ C + A +L+ M G+S
Sbjct: 408 FEECLELMEKMRQIEYHPD-------IGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSP 460
Query: 407 EIDTFDCLIKCFCKRGDLNKAARILEEMISDG 438
+DTF +I +G L +A+ +EM++ G
Sbjct: 461 GVDTFVIMINGLASQGCLLEASDHFKEMVTRG 492
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 146/311 (46%), Gaps = 6/311 (1%)
Query: 17 LVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERM 76
LV++ A+ + KA+ + D GF D FG ++ L + A L E M
Sbjct: 189 LVQRFASADM-VKKAIEVLDEMP---KFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM 244
Query: 77 KQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHV 136
+ V ++ G+ RV + ++A V +M + + Y ++ +
Sbjct: 245 RM-RFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKM 303
Query: 137 KRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGT 196
A R+MR+ G P+ +LI+ALCK + ++ A+++F EM C+ D TY
Sbjct: 304 ADAYDLLRDMRRRGFEPNANCYTVLIQALCK-VDRMEEAMKVFVEMERYECEADVVTYTA 362
Query: 197 LINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNG 256
L++G C+ G + + + ++M +KG PS +TY ++ + ++ E + L+E+M++
Sbjct: 363 LVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIE 422
Query: 257 IEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAV 316
P++ Y+ ++ CK G +A+ L M P + T+ +INGL +G EA
Sbjct: 423 YHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEAS 482
Query: 317 EILDRMRLQGL 327
+ M +GL
Sbjct: 483 DHFKEMVTRGL 493
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 124/254 (48%), Gaps = 13/254 (5%)
Query: 193 TYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVT---YTSLIHGMCQSDNLGEAIRLL 249
Y +++ L +M L EM ++ +P ++ + L+ +D + +AI +L
Sbjct: 149 VYKSMVKILSKMRQFGAVWGLIEEMRKE--NPQLIEPELFVVLVQRFASADMVKKAIEVL 206
Query: 250 EEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKE 309
+EM K G EP+ + + L+D LCK G A +L E M + N+ + +L+ G C+
Sbjct: 207 DEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFP-VNLRYFTSLLYGWCRV 265
Query: 310 GKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATW 369
GK EA +L +M G +P+ Y ++SG+ A DA + + +M G P+ +
Sbjct: 266 GKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCY 325
Query: 370 SLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAAR 429
++ ++Q LC A ++++ M ++ T+ L+ FCK G ++K
Sbjct: 326 TV-------LIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYI 378
Query: 430 ILEEMISDGCVPDK 443
+L++MI G +P +
Sbjct: 379 VLDDMIKKGLMPSE 392
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 136/302 (45%), Gaps = 8/302 (2%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
GF D + ++S A + A LL M++ + + + +V R +A
Sbjct: 282 GFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEA 341
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVS-LNILIK 163
++VF +ME ++ + +Y ++ + + + +M K G+ PS ++ ++I++
Sbjct: 342 MKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVA 401
Query: 164 ALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFS 223
+ KE+ + L++ +M PD Y +I C++G V EA L+NEMEE G S
Sbjct: 402 H--EKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLS 459
Query: 224 PSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYST---LMDGLCKGGHSLQA 280
P V T+ +I+G+ L EA +EM G+ +V Y T L++ + K A
Sbjct: 460 PGVDTFVIMINGLASQGCLLEASDHFKEMVTRGL-FSVSQYGTLKLLLNTVLKDKKLEMA 518
Query: 281 MELLEMMVTKHN-RPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIIS 339
++ + +K N++++ I+ L +G EA M P + K++
Sbjct: 519 KDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMK 578
Query: 340 GF 341
G
Sbjct: 579 GL 580
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 181/380 (47%), Gaps = 51/380 (13%)
Query: 122 SYLTVIDILVEENHVKRAIAFYREMRKMGIP---PSVVSLNILIKALCKNKETIDSALQI 178
S L+V+ I + NH+ +A ++ +R P PSV N+L+++ C + ++ +
Sbjct: 77 SLLSVVSIFAKSNHIDKAFPQFQLVRSR-FPENKPSVYLYNLLLES-CIKERRVEFVSWL 134
Query: 179 FHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQ 238
+ +M G P +YT+ LI LC V A+ELF+EM EKG P+ T+ L+ G C+
Sbjct: 135 YKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCK 194
Query: 239 SDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVT 298
+ + + LL M+ G+ PN Y+T++ C+ G + + +++E M + P++VT
Sbjct: 195 AGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVT 254
Query: 299 YGTLINGLCKEGKFSEAVEILDRMRLQ---GL-KPNAGLYGKIISGFCAASSYQDA---- 350
+ + I+ LCKEGK +A I M L GL +PN+ Y ++ GFC +DA
Sbjct: 255 FNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLF 314
Query: 351 -------------------------ANFID------EMVLGGISPSRATWSLHVRMHNTV 379
FI+ +M GI PS + +N +
Sbjct: 315 ESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPS-------IYSYNIL 367
Query: 380 VQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGC 439
+ GLC A + M+ G+ + T+ CL+ +C G ++ A +L+EM+ + C
Sbjct: 368 MDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNC 427
Query: 440 VPDKGIWDVVMGGLWDRKKV 459
+P+ ++++ LW ++
Sbjct: 428 LPNAYTCNILLHSLWKMGRI 447
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 192/439 (43%), Gaps = 43/439 (9%)
Query: 52 TFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKM 111
TF ++I L ++ +A L + M ++ C E + RGY + + + + M
Sbjct: 149 TFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAM 208
Query: 112 EDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKET 171
E F + + Y T++ E + +MR+ G+ P +V+ N I ALCK +
Sbjct: 209 ESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKV 268
Query: 172 IDSALQIFHEM--------PNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFS 223
+D++ +IF +M P +P+S TY ++ G C++G + +AK LF + E
Sbjct: 269 LDAS-RIFSDMELDEYLGLP----RPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDL 323
Query: 224 PSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMEL 283
S+ +Y + G+ + EA +L++M GI P++++Y+ LMDGLCK G A +
Sbjct: 324 ASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTI 383
Query: 284 LEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCA 343
+ +M P+ VTYG L++G C GK A +L M PNA ++
Sbjct: 384 VGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWK 443
Query: 344 ASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRG 403
+A + +M + + L N +V GLC + + +A ++ MR G
Sbjct: 444 MGRISEAEELLRKM-------NEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496
Query: 404 ISI-----------------------EIDTFDCLIKCFCKRGDLNKAARILEEMISDGCV 440
+ ++ T+ L+ CK G +A + EM+ +
Sbjct: 497 SAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQ 556
Query: 441 PDKGIWDVVMGGLWDRKKV 459
PD +++ + + K+
Sbjct: 557 PDSVAYNIFIHHFCKQGKI 575
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 210/447 (46%), Gaps = 41/447 (9%)
Query: 43 SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCV---VTEDILLTICRGYGRVH 99
S G + + ++S + +E ++E+M++E V VT + ++ G+V
Sbjct: 210 SFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKV- 268
Query: 100 RPLDAIRVFHKME-DFQLKFTQKSYLT---VIDILVEENHVKRAIAFYREMRKMGIPPSV 155
LDA R+F ME D L + + +T ++ + ++ A + +R+ S+
Sbjct: 269 --LDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASL 326
Query: 156 VSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFN 215
S NI ++ L ++ + I+ A + +M ++G P Y+Y L++GLC++G +S+AK +
Sbjct: 327 QSYNIWLQGLVRHGKFIE-AETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVG 385
Query: 216 EMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGG 275
M+ G P VTY L+HG C + A LL+EM +N PN +T + L+ L K G
Sbjct: 386 LMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMG 445
Query: 276 HSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLK------- 328
+A ELL M K + VT +++GLC G+ +A+EI+ MR+ G
Sbjct: 446 RISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGN 505
Query: 329 ----------------PNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLH 372
P+ Y +++G C A + +A N EM+ + P +++
Sbjct: 506 SYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIF 565
Query: 373 VRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILE 432
+ H+ QG S+ AF++ M +G ++T++ LI + + + +++
Sbjct: 566 I--HHFCKQGKISS-----AFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMD 618
Query: 433 EMISDGCVPDKGIWDVVMGGLWDRKKV 459
EM G P+ ++ + L + +KV
Sbjct: 619 EMKEKGISPNICTYNTAIQYLCEGEKV 645
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 179/413 (43%), Gaps = 27/413 (6%)
Query: 44 NGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCV---VTEDILLTICRGYGRVHR 100
NG D T+G ++ + + +A+ LL+ M + NC+ T +ILL GR+
Sbjct: 390 NGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRIS- 448
Query: 101 PLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNI 160
+A + KM + + ++D L + +AI + MR G N
Sbjct: 449 --EAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNS 506
Query: 161 LIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
I +D +L C PD TY TL+NGLC+ G +EAK LF EM +
Sbjct: 507 YIG-------LVDDSL------IENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGE 553
Query: 221 GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQA 280
P V Y IH C+ + A R+L++M+K G ++ TY++L+ GL +
Sbjct: 554 KLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEI 613
Query: 281 MELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISG 340
L++ M K PN+ TY T I LC+ K +A +LD M + + PN + +I
Sbjct: 614 HGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEA 673
Query: 341 FCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMR 400
FC + D A + E + +SL Q L +A +L ++
Sbjct: 674 FCKVPDF-DMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLL-------KATELLEAVL 725
Query: 401 TRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
RG + + L++ CK+ +L A+ IL +MI G D V+ GL
Sbjct: 726 DRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGL 778
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 155/364 (42%), Gaps = 58/364 (15%)
Query: 52 TFGVMISRLVAANQFRSAEGLLERMKQENC---VVTEDILLTICRGYGRVHRPLDAIRVF 108
T +++ L + AE LL +M ++ VT +I++ G G + + ++ ++
Sbjct: 433 TCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM 492
Query: 109 HKMEDFQLKFTQKSYLTVID-ILVEENHVKRAIAF-------------------YREMRK 148
L SY+ ++D L+E N + I + + EM
Sbjct: 493 RVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMG 552
Query: 149 MGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVS 208
+ P V+ NI I CK + I SA ++ +M +GC TY +LI GL +
Sbjct: 553 EKLQPDSVAYNIFIHHFCKQGK-ISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIF 611
Query: 209 EAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLM 268
E L +EM+EKG SP++ TY + I +C+ + + +A LL+EM + I PNVF++ L+
Sbjct: 612 EIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLI 671
Query: 269 DGLCK----------------------------------GGHSLQAMELLEMMVTKHNRP 294
+ CK G L+A ELLE ++ +
Sbjct: 672 EAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFEL 731
Query: 295 NMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFI 354
Y L+ LCK+ + A IL +M +G + +I G + ++A +F
Sbjct: 732 GTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFA 791
Query: 355 DEMV 358
D+M+
Sbjct: 792 DKMM 795
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 121/280 (43%), Gaps = 7/280 (2%)
Query: 10 PKQIT-SSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRS 68
P IT S+L+ L KA + +A +F E + D + + I + S
Sbjct: 522 PDLITYSTLLNGLCKAGR-FAEAKNLFAEMMGE---KLQPDSVAYNIFIHHFCKQGKISS 577
Query: 69 AEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVID 128
A +L+ M+++ C + + ++ G G ++ + + +M++ + +Y T I
Sbjct: 578 AFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQ 637
Query: 129 ILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQ 188
L E V+ A EM + I P+V S LI+A CK + D A ++F E C
Sbjct: 638 YLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPD-FDMAQEVF-ETAVSICG 695
Query: 189 PDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRL 248
Y + N L G + +A EL + ++GF Y L+ +C+ D L A +
Sbjct: 696 QKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGI 755
Query: 249 LEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMV 288
L +M G + ++DGL K G+ +A + M+
Sbjct: 756 LHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMM 795
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 175/353 (49%), Gaps = 9/353 (2%)
Query: 87 ILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREM 146
++ R GR + A ++ K+ + ++Y T++ ++AI + M
Sbjct: 177 VIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERM 236
Query: 147 RKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGS 206
++MG P++V+ N+++ K + L + EM ++G + D +T T+++ R G
Sbjct: 237 KEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGL 296
Query: 207 VSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYST 266
+ EAKE F E++ G+ P VTY +L+ ++ EA+ +L+EM++N + TY+
Sbjct: 297 LREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNE 356
Query: 267 LMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQG 326
L+ + G S +A ++EMM K PN +TY T+I+ K GK EA+++ M+ G
Sbjct: 357 LVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAG 416
Query: 327 LKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSN 386
PN Y ++S S + + +M G SP+RATW NT++ LC N
Sbjct: 417 CVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATW-------NTML-ALCGN 468
Query: 387 VDSPRAF-QLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDG 438
+ +++ M++ G + DTF+ LI + + G A+++ EM G
Sbjct: 469 KGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAG 521
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/439 (22%), Positives = 196/439 (44%), Gaps = 33/439 (7%)
Query: 44 NGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLD 103
N D T+ +++ V A + A G++E M ++ + T+ YG+ + +
Sbjct: 345 NSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDE 404
Query: 104 AIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIK 163
A+++F+ M++ +Y V+ +L +++ I +M+ G P+ + N ++
Sbjct: 405 ALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML- 463
Query: 164 ALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFS 223
ALC NK ++F EM + G +PD T+ TLI+ R GS +A +++ EM GF+
Sbjct: 464 ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFN 523
Query: 224 PSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMEL 283
V TY +L++ + + + ++ +MK G +P +YS ++ KGG+ L +
Sbjct: 524 ACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERI 583
Query: 284 LEMMVTKHNRPNMVTYGTLI--NGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGF 341
+ P+ + TL+ N C+ SE L + G KP+ ++ ++S F
Sbjct: 584 ENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTL--FKKHGYKPDMVIFNSMLSIF 641
Query: 342 CAASSYQDAANFIDEMVLGGISPSRATWS----LHVRM---------------------- 375
+ Y A ++ + G+SP T++ ++VR
Sbjct: 642 TRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDL 701
Query: 376 --HNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEE 433
+NTV++G C A ++ M RGI I T++ + + G + ++E
Sbjct: 702 VSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIEC 761
Query: 434 MISDGCVPDKGIWDVVMGG 452
M + C P++ + +V+ G
Sbjct: 762 MAKNDCRPNELTFKMVVDG 780
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 172/378 (45%), Gaps = 16/378 (4%)
Query: 65 QFRSAEGLLERMKQ---ENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQK 121
++ A L ERMK+ +VT +++L + GR R + + V +M LKF +
Sbjct: 225 KYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKI--LGVLDEMRSKGLKFDEF 282
Query: 122 SYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHE 181
+ TV+ E ++ A F+ E++ G P V+ N L++ K AL + E
Sbjct: 283 TCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK-AGVYTEALSVLKE 341
Query: 182 MPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDN 241
M C DS TY L+ R G EA + M +KG P+ +TYT++I ++
Sbjct: 342 MEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGK 401
Query: 242 LGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGT 301
EA++L MK+ G PN TY+ ++ L K S + +++L M + PN T+ T
Sbjct: 402 EDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNT 461
Query: 302 LINGLCKEGKFSEAV-EILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLG 360
++ LC + V + M+ G +P+ + +IS + S DA+ EM
Sbjct: 462 ML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEM--- 517
Query: 361 GISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCK 420
+RA ++ V +N ++ L D + M+++G ++ +++C+ K
Sbjct: 518 ----TRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAK 573
Query: 421 RGDLNKAARILEEMISDG 438
G+ RI E I +G
Sbjct: 574 GGNYLGIERI-ENRIKEG 590
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 144/283 (50%), Gaps = 9/283 (3%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
GF TT+ +++ L +RS E ++ MK + TE + + Y + L
Sbjct: 521 GFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGI 580
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIA----FYREMRKMGIPPSVVSLNI 160
R+ +++++ Q+ S++ + +L+ N RA+A + +K G P +V N
Sbjct: 581 ERIENRIKEGQI---FPSWMLLRTLLLA-NFKCRALAGSERAFTLFKKHGYKPDMVIFNS 636
Query: 161 LIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
++ +N D A I + G PD TY +L++ R G +A+E+ +E+
Sbjct: 637 MLSIFTRNN-MYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKS 695
Query: 221 GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQA 280
P +V+Y ++I G C+ + EA+R+L EM + GI P +FTY+T + G G +
Sbjct: 696 QLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEI 755
Query: 281 MELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMR 323
+++E M RPN +T+ +++G C+ GK+SEA++ + +++
Sbjct: 756 EDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIK 798
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/447 (22%), Positives = 200/447 (44%), Gaps = 47/447 (10%)
Query: 43 SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENC---VVTEDILL---------- 89
S G+ T+ ++ A + A +L+ M++ +C VT + L+
Sbjct: 309 SCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSK 368
Query: 90 ----------------------TICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVI 127
T+ YG+ + +A+++F+ M++ +Y V+
Sbjct: 369 EAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVL 428
Query: 128 DILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGC 187
+L +++ I +M+ G P+ + N ++ ALC NK ++F EM + G
Sbjct: 429 SLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGF 487
Query: 188 QPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIR 247
+PD T+ TLI+ R GS +A +++ EM GF+ V TY +L++ + + +
Sbjct: 488 EPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGEN 547
Query: 248 LLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLI--NG 305
++ +MK G +P +YS ++ KGG+ L + + P+ + TL+ N
Sbjct: 548 VISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANF 607
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPS 365
C+ SE L + G KP+ ++ ++S F + Y A ++ + G+SP
Sbjct: 608 KCRALAGSERAFTL--FKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPD 665
Query: 366 RATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLN 425
T++ + M+ V +G C +A ++ ++ + ++ +++ +IK FC+RG +
Sbjct: 666 LVTYNSLMDMY--VRRGECW-----KAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQ 718
Query: 426 KAARILEEMISDGCVPDKGIWDVVMGG 452
+A R+L EM G P ++ + G
Sbjct: 719 EAVRMLSEMTERGIRPCIFTYNTFVSG 745
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 169/363 (46%), Gaps = 23/363 (6%)
Query: 98 VHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVS 157
V +PL + F + + + + ++++ L + H +RA+ F E + +
Sbjct: 116 VEQPLTGLSRF--FDSVKSELLRTDLVSLVKGLDDSGHWERAV-FLFEWLVLSSNSGALK 172
Query: 158 LN-----ILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKE 212
L+ I ++ L + + A ++ ++P + D Y T+++ R G +A +
Sbjct: 173 LDHQVIEIFVRILGRESQ-YSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAID 231
Query: 213 LFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIR----LLEEMKKNGIEPNVFTYSTLM 268
LF M+E G SP++VTY ++ + +G + R +L+EM+ G++ + FT ST++
Sbjct: 232 LFERMKEMGPSPTLVTYNVILDVFGK---MGRSWRKILGVLDEMRSKGLKFDEFTCSTVL 288
Query: 269 DGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLK 328
+ G +A E + + P VTY L+ K G ++EA+ +L M
Sbjct: 289 SACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCP 348
Query: 329 PNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVD 388
++ Y ++++ + A ++AA I+ M G+ P+ T++ TV+
Sbjct: 349 ADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYT-------TVIDAYGKAGK 401
Query: 389 SPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDV 448
A +L+ SM+ G T++ ++ K+ N+ ++L +M S+GC P++ W+
Sbjct: 402 EDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNT 461
Query: 449 VMG 451
++
Sbjct: 462 MLA 464
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 159/352 (45%), Gaps = 28/352 (7%)
Query: 43 SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPL 102
SNG + T+ M++ + + MK D T+ YGR +
Sbjct: 449 SNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEV 508
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
DA +++ +M +Y +++ L + + +M+ G P+ S ++++
Sbjct: 509 DASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLML 568
Query: 163 KALCKNK-----ETIDSAL---QIFHEMPNRGCQPDSYTYGTLI--NGLCRMGSVSEAKE 212
+ K E I++ + QIF P TL+ N CR +++ ++
Sbjct: 569 QCYAKGGNYLGIERIENRIKEGQIF---------PSWMLLRTLLLANFKCR--ALAGSER 617
Query: 213 LFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLC 272
F ++ G+ P +V + S++ +++ +A +LE ++++G+ P++ TY++LMD
Sbjct: 618 AFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYV 677
Query: 273 KGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAG 332
+ G +A E+L+ + +P++V+Y T+I G C+ G EAV +L M +G++P
Sbjct: 678 RRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIF 737
Query: 333 LYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLC 384
Y +SG+ A + + + I+ M P+ T+ + VV G C
Sbjct: 738 TYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKM-------VVDGYC 782
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 108/247 (43%), Gaps = 1/247 (0%)
Query: 43 SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPL 102
S GF+ T++ +M+ + E + R+K+ + +L T+ +
Sbjct: 554 SKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALA 613
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
+ R F + K + +++ I N +A +R+ G+ P +V+ N L+
Sbjct: 614 GSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLM 673
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF 222
+ E A +I + +PD +Y T+I G CR G + EA + +EM E+G
Sbjct: 674 DMYVRRGECW-KAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGI 732
Query: 223 SPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAME 282
P + TY + + G E ++E M KN PN T+ ++DG C+ G +AM+
Sbjct: 733 RPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMD 792
Query: 283 LLEMMVT 289
+ + T
Sbjct: 793 FVSKIKT 799
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 201/443 (45%), Gaps = 29/443 (6%)
Query: 18 VEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMK 77
+ QLI + N +L S G+ ++F ++S + Q + AE ++ M
Sbjct: 28 IHQLINS----NCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMP 83
Query: 78 QENC---VVTEDILLT-ICRGYGRVHRP---LDAIRVFHKMEDFQLKFTQKSYLTVIDIL 130
+ C V++ + L+ CR G + L+++R H F K S+ ++ +
Sbjct: 84 RFGCEPDVISYNSLIDGHCRN-GDIRSASLVLESLRASHG---FICKPDIVSFNSLFNGF 139
Query: 131 VEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPD 190
+ + + M K P+VV+ + I CK+ E + AL+ FH M P+
Sbjct: 140 SKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSGE-LQLALKSFHSMKRDALSPN 197
Query: 191 SYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLE 250
T+ LI+G C+ G + A L+ EM S +VVTYT+LI G C+ + A +
Sbjct: 198 VVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYS 257
Query: 251 EMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEG 310
M ++ +EPN Y+T++DG + G S AM+ L M+ + R ++ YG +I+GLC G
Sbjct: 258 RMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNG 317
Query: 311 KFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWS 370
K EA EI++ M L P+ ++ +++ + + + A N +++ G P S
Sbjct: 318 KLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALS 377
Query: 371 LHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARI 430
T++ G+ N A + + + + LI CK GD + R+
Sbjct: 378 -------TMIDGIAKNGQLHEAIVYFCIEKANDV-----MYTVLIDALCKEGDFIEVERL 425
Query: 431 LEEMISDGCVPDKGIWDVVMGGL 453
++ G VPDK ++ + GL
Sbjct: 426 FSKISEAGLVPDKFMYTSWIAGL 448
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 205/451 (45%), Gaps = 53/451 (11%)
Query: 27 DINKAVLMFDSATAEYSNGFRHDHTTFGVMI---SRLVAANQFRSAEGLLERMKQENCVV 83
DI A L+ +S A + + D +F + S++ ++ G++ + N V
Sbjct: 106 DIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVT 165
Query: 84 TEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFY 143
+ T C+ G + A++ FH M+ L ++ +ID + ++ A++ Y
Sbjct: 166 YSTWIDTFCKS-GELQL---ALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLY 221
Query: 144 REMRKMGIPPSVVSLNILIKALCKNKE------------------------TI------- 172
+EMR++ + +VV+ LI CK E TI
Sbjct: 222 KEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQR 281
Query: 173 ---DSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTY 229
D+A++ +M N+G + D YG +I+GLC G + EA E+ +ME+ P +V +
Sbjct: 282 GDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIF 341
Query: 230 TSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVT 289
T++++ +S + A+ + ++ + G EP+V ST++DG+ K G +A+ +
Sbjct: 342 TTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCI--- 398
Query: 290 KHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQD 349
+ N V Y LI+ LCKEG F E + ++ GL P+ +Y I+G C + D
Sbjct: 399 --EKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVD 456
Query: 350 AANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEID 409
A MV G+ L + + T++ GL S A Q++ M GIS +
Sbjct: 457 AFKLKTRMVQEGLL-------LDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSA 509
Query: 410 TFDCLIKCFCKRGDLNKAARILEEMISDGCV 440
FD LI+ + K G++ A+ +L +M G V
Sbjct: 510 VFDLLIRAYEKEGNMAAASDLLLDMQRRGLV 540
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 149/334 (44%), Gaps = 12/334 (3%)
Query: 130 LVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQP 189
L+ N ++ F + G P S N ++ +CK + + A I H MP GC+P
Sbjct: 31 LINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQ-VKFAEDIVHSMPRFGCEP 89
Query: 190 DSYTYGTLINGLCRMGSVSEAKELFNEME-EKGF--SPSVVTYTSLIHGMCQSDNLGEAI 246
D +Y +LI+G CR G + A + + GF P +V++ SL +G + L E
Sbjct: 90 DVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF 149
Query: 247 RLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGL 306
+ M K PNV TYST +D CK G A++ M PN+VT+ LI+G
Sbjct: 150 VYMGVMLK-CCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGY 208
Query: 307 CKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSR 366
CK G AV + MR + N Y +I GFC Q A MV + P+
Sbjct: 209 CKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNS 268
Query: 367 ATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNK 426
++ T++ G DS A + M +G+ ++I + +I C G L +
Sbjct: 269 LVYT-------TIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKE 321
Query: 427 AARILEEMISDGCVPDKGIWDVVMGGLWDRKKVR 460
A I+E+M VPD I+ +M + +++
Sbjct: 322 ATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMK 355
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 133/292 (45%), Gaps = 19/292 (6%)
Query: 172 IDSALQIFHEMPNRGCQPDSYTYG----TLINGLCRMGSVSEAKELFNEMEEKGFSPSVV 227
+ ALQ + PD +T LIN C + S+ + + +G++P
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSL----KFLAYLVSRGYTPHRS 57
Query: 228 TYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMM 287
++ S++ +C+ + A ++ M + G EP+V +Y++L+DG C+ G A +LE +
Sbjct: 58 SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESL 117
Query: 288 VTKHN---RPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAA 344
H +P++V++ +L NG K E + M L+ PN Y I FC +
Sbjct: 118 RASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVM-LKCCSPNVVTYSTWIDTFCKS 176
Query: 345 SSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGI 404
Q A M +SP+ T++ ++ G C D A LY MR +
Sbjct: 177 GELQLALKSFHSMKRDALSPNVVTFT-------CLIDGYCKAGDLEVAVSLYKEMRRVRM 229
Query: 405 SIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDR 456
S+ + T+ LI FCK+G++ +A + M+ D P+ ++ ++ G + R
Sbjct: 230 SLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQR 281
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 175/370 (47%), Gaps = 3/370 (0%)
Query: 5 TLFKWPKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAAN 64
TL + +++S+LVEQ++K K++ F A F H ++ +++ L ++
Sbjct: 58 TLVAYSPRVSSNLVEQVLKRCKNLGFPAHRF-FLWARRIPDFAHSLESYHILVEILGSSK 116
Query: 65 QFRSAEGLLERMKQENCV-VTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSY 123
QF L ++ N ++ + + R Y R + P +A R F++M +F +K
Sbjct: 117 QFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDL 176
Query: 124 LTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMP 183
++ L ++ HV A F+ + + GI PS + +IL++ + ++ A ++F EM
Sbjct: 177 DQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDA-SGARKVFDEML 235
Query: 184 NRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLG 243
R C D Y L++ LC+ G V ++F EM G P ++ IH C + ++
Sbjct: 236 ERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVH 295
Query: 244 EAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLI 303
A ++L+ MK+ + PNV+T++ ++ LCK A LL+ M+ K P+ TY +++
Sbjct: 296 SAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIM 355
Query: 304 NGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGIS 363
C + + A ++L RM P+ Y ++ + A + M
Sbjct: 356 AYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFY 415
Query: 364 PSRATWSLHV 373
P+ AT+++ +
Sbjct: 416 PTVATYTVMI 425
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 118/260 (45%), Gaps = 7/260 (2%)
Query: 191 SYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLE 250
S + + R SEA FN M E G P V L+H +C ++ A
Sbjct: 138 SKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFG 197
Query: 251 EMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEG 310
+ K GI P+ TYS L+ G + + A ++ + M+ ++ +++ Y L++ LCK G
Sbjct: 198 KAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSG 257
Query: 311 KFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWS 370
++ M GLKP+A + I +C A A +D M + P+ T+
Sbjct: 258 DVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTF- 316
Query: 371 LHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARI 430
N +++ LC N A+ L M +G + + T++ ++ C ++N+A ++
Sbjct: 317 ------NHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKL 370
Query: 431 LEEMISDGCVPDKGIWDVVM 450
L M C+PD+ +++V+
Sbjct: 371 LSRMDRTKCLPDRHTYNMVL 390
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 97/239 (40%), Gaps = 8/239 (3%)
Query: 222 FSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKK-NGIEPNVFTYSTLMDGLCKGGHSLQA 280
F+ S+ +Y L+ + S L E ++ N E + + + + +A
Sbjct: 98 FAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEA 157
Query: 281 MELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISG 340
MV +P + L++ LC + + A E + + G+ P+A Y ++ G
Sbjct: 158 CRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRG 217
Query: 341 FCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMR 400
+ A DEM+ + + +N ++ LC + D ++++ M
Sbjct: 218 WARIRDASGARKVFDEML-------ERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMG 270
Query: 401 TRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
G+ + +F I +C GD++ A ++L+ M VP+ ++ ++ L +KV
Sbjct: 271 NLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKV 329
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 161/349 (46%), Gaps = 34/349 (9%)
Query: 122 SYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCK------NKETIDSA 175
+Y TVI L E A F EM KMGI P VS N LI CK K +D
Sbjct: 163 TYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEI 222
Query: 176 LQI---------------------FHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELF 214
++ + +M G PD T+ ++IN LC+ G V E L
Sbjct: 223 SELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLL 282
Query: 215 NEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKG 274
EMEE P+ VTYT+L+ + +++ A+ L +M GI ++ Y+ LMDGL K
Sbjct: 283 REMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKA 342
Query: 275 GHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLY 334
G +A + +M++ + PN+VTY L++GLCK G S A I+ +M + + PN Y
Sbjct: 343 GDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTY 402
Query: 335 GKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQ 394
+I+G+ ++A + + +M + P+ T+ TV+ GL A +
Sbjct: 403 SSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYG-------TVIDGLFKAGKEEMAIE 455
Query: 395 LYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDK 443
L MR G+ D L+ + G + + ++++M+S G D+
Sbjct: 456 LSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQ 504
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 175/398 (43%), Gaps = 40/398 (10%)
Query: 90 TICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAF-YREMRK 148
T+ R Y R A R M F + + + ++I V ++ Y +M
Sbjct: 63 TLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIA 122
Query: 149 MGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVS 208
G+ P V +LN+LI + CK + A+ + NR D+ TY T+I+GLC G
Sbjct: 123 CGVSPDVFALNVLIHSFCKVGR-LSFAISLLR---NRVISIDTVTYNTVISGLCEHGLAD 178
Query: 209 EAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEE----------------- 251
EA + +EM + G P V+Y +LI G C+ N A L++E
Sbjct: 179 EAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYY 238
Query: 252 -----------MKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYG 300
M +G +P+V T+S++++ LCKGG L+ LL M PN VTY
Sbjct: 239 NLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYT 298
Query: 301 TLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLG 360
TL++ L K + A+ + +M ++G+ + +Y ++ G A ++A ++
Sbjct: 299 TLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLED 358
Query: 361 GISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCK 420
P+ T++ +V GLC D A + M + + + T+ +I + K
Sbjct: 359 NQVPNVVTYT-------ALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVK 411
Query: 421 RGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKK 458
+G L +A +L +M VP+ + V+ GL+ K
Sbjct: 412 KGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGK 449
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 185/380 (48%), Gaps = 13/380 (3%)
Query: 80 NCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRA 139
+ V I+ +C+G G+V L+ + +ME+ + +Y T++D L + N + A
Sbjct: 258 DVVTFSSIINRLCKG-GKV---LEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHA 313
Query: 140 IAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLIN 199
+A Y +M GIP +V +L+ L K + + A + F + P+ TY L++
Sbjct: 314 LALYSQMVVRGIPVDLVVYTVLMDGLFKAGD-LREAEKTFKMLLEDNQVPNVVTYTALVD 372
Query: 200 GLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEP 259
GLC+ G +S A+ + +M EK P+VVTY+S+I+G + L EA+ LL +M+ + P
Sbjct: 373 GLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVP 432
Query: 260 NVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEIL 319
N FTY T++DGL K G A+EL + M N L+N L + G+ E ++
Sbjct: 433 NGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLV 492
Query: 320 DRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTV 379
M +G+ + Y +I F + A + +EM G+ W V +N +
Sbjct: 493 KDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMP-----WD--VVSYNVL 545
Query: 380 VQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGC 439
+ G+ A Y MR +GI +I TF+ ++ K+GD ++ ++M S G
Sbjct: 546 ISGML-KFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGI 604
Query: 440 VPDKGIWDVVMGGLWDRKKV 459
P ++V+G L + K+
Sbjct: 605 KPSLMSCNIVVGMLCENGKM 624
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 197/409 (48%), Gaps = 18/409 (4%)
Query: 44 NGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLD 103
NGF T+G +I L A + A L + M+ IL + R+ R +
Sbjct: 433 NGF-----TYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKE 487
Query: 104 AIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIK 163
+ M + Q +Y ++ID+ + + A+A+ EM++ G+P VVS N+LI
Sbjct: 488 VKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLIS 547
Query: 164 ALCK-NKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF 222
+ K K D A + M +G +PD T+ ++N + G +L+++M+ G
Sbjct: 548 GMLKFGKVGADWA---YKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGI 604
Query: 223 SPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAME 282
PS+++ ++ +C++ + EAI +L +M I PN+ TY +D K + +
Sbjct: 605 KPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFK 664
Query: 283 LLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFC 342
E +++ + + Y TLI LCK G +A ++ M +G P+ + ++ G+
Sbjct: 665 THETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYF 724
Query: 343 AASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLS-MRT 401
S + A + M+ GISP+ AT+ NT+++GL S+ + +LS M++
Sbjct: 725 VGSHVRKALSTYSVMMEAGISPNVATY-------NTIIRGL-SDAGLIKEVDKWLSEMKS 776
Query: 402 RGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVM 450
RG+ + T++ LI K G++ + I EMI+DG VP ++V++
Sbjct: 777 RGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLI 825
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 191/405 (47%), Gaps = 11/405 (2%)
Query: 52 TFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKM 111
T+ ++ L A SAE ++ +M +++ + ++ GY + +A+ + KM
Sbjct: 366 TYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM 425
Query: 112 EDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKET 171
ED + +Y TVID L + + AI +EMR +G+ + L+ L+ L K
Sbjct: 426 EDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHL-KRIGR 484
Query: 172 IDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTS 231
I + +M ++G D Y +LI+ + G A EM+E+G VV+Y
Sbjct: 485 IKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNV 544
Query: 232 LIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKH 291
LI GM + +G A + M++ GIEP++ T++ +M+ K G S ++L + M +
Sbjct: 545 LISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCG 603
Query: 292 NRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAA 351
+P++++ ++ LC+ GK EA+ IL++M L + PN Y +I + DA
Sbjct: 604 IKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTY-RIFLDTSSKHKRADAI 662
Query: 352 NFIDEMVLG-GISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDT 410
E +L GI SR +++NT++ LC + +A + M RG + T
Sbjct: 663 FKTHETLLSYGIKLSR-------QVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVT 715
Query: 411 FDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWD 455
F+ L+ + + KA M+ G P+ ++ ++ GL D
Sbjct: 716 FNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSD 760
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 162/349 (46%), Gaps = 15/349 (4%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQ---ENCVVTEDILLTICRGYGRVHRP 101
G D ++ V+IS ++ + A+ + M++ E + T +I++ R G
Sbjct: 534 GMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGI 592
Query: 102 LDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNIL 161
L +++ KM+ +K + S V+ +L E ++ AI +M M I P++ + I
Sbjct: 593 L---KLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIF 649
Query: 162 IKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKG 221
+ K+K D+ + + + G + Y TLI LC++G +A + +ME +G
Sbjct: 650 LDTSSKHKRA-DAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARG 708
Query: 222 FSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAM 281
F P VT+ SL+HG ++ +A+ M + GI PNV TY+T++ GL G +
Sbjct: 709 FIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVD 768
Query: 282 ELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGF 341
+ L M ++ RP+ TY LI+G K G ++ I M GL P Y +IS F
Sbjct: 769 KWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEF 828
Query: 342 CAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSP 390
A + EM G+SP+ +T+ T++ GLC P
Sbjct: 829 ANVGKMLQARELLKEMGKRGVSPNTSTYC-------TMISGLCKLCTHP 870
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/460 (23%), Positives = 214/460 (46%), Gaps = 28/460 (6%)
Query: 9 WPKQIT-SSLVEQLIKAEKDINKAVLMFDSATAEYSN----GFRHDHTTFGVMISRLVAA 63
+P +T ++LV+ L KA ++ A A YS G D + V++ L A
Sbjct: 291 YPNHVTYTTLVDSLFKAN--------IYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKA 342
Query: 64 NQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSY 123
R AE + + ++N V + G + A + +M + + +Y
Sbjct: 343 GDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTY 402
Query: 124 LTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMP 183
++I+ V++ ++ A++ R+M + P+ + +I L K + + A+++ EM
Sbjct: 403 SSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKE-EMAIELSKEMR 461
Query: 184 NRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLG 243
G + ++Y L+N L R+G + E K L +M KG + + YTSLI + +
Sbjct: 462 LIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEE 521
Query: 244 EAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLI 303
A+ EEM++ G+ +V +Y+ L+ G+ K G + A + M K P++ T+ ++
Sbjct: 522 AALAWAEEMQERGMPWDVVSYNVLISGMLKFG-KVGADWAYKGMREKGIEPDIATFNIMM 580
Query: 304 NGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGIS 363
N K+G +++ D+M+ G+KP+ ++ C ++A + +++M+L I
Sbjct: 581 NSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIH 640
Query: 364 PSRATWSLHVRMHNTVVQGLCSNVDSPRA---FQLYLSMRTRGISIEIDTFDCLIKCFCK 420
P+ T+ + L ++ RA F+ + ++ + GI + ++ LI CK
Sbjct: 641 PNLTTYRIF----------LDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCK 690
Query: 421 RGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKVR 460
G KAA ++ +M + G +PD ++ +M G + VR
Sbjct: 691 LGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVR 730
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 148/312 (47%), Gaps = 13/312 (4%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQ---ENCVVTEDILLTICRGYGRVHRP 101
G D TF +M++ L ++MK + +++ +I++ + G++
Sbjct: 568 GIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKME-- 625
Query: 102 LDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKM---GIPPSVVSL 158
+AI + ++M ++ +Y +D H KRA A ++ + GI S
Sbjct: 626 -EAIHILNQMMLMEIHPNLTTYRIFLD--TSSKH-KRADAIFKTHETLLSYGIKLSRQVY 681
Query: 159 NILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEME 218
N LI LCK T +A+ + +M RG PD+ T+ +L++G V +A ++ M
Sbjct: 682 NTLIATLCKLGMTKKAAM-VMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMM 740
Query: 219 EKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSL 278
E G SP+V TY ++I G+ + + E + L EMK G+ P+ FTY+ L+ G K G+
Sbjct: 741 EAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMK 800
Query: 279 QAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKII 338
+M + M+ P TY LI+ GK +A E+L M +G+ PN Y +I
Sbjct: 801 GSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMI 860
Query: 339 SGFCAASSYQDA 350
SG C ++ D
Sbjct: 861 SGLCKLCTHPDV 872
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 132/281 (46%), Gaps = 8/281 (2%)
Query: 140 IAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLIN 199
+ + +M+ GI PS++S NI++ LC+N + ++ A+ I ++M P+ TY ++
Sbjct: 593 LKLWDKMKSCGIKPSLMSCNIVVGMLCENGK-MEEAIHILNQMMLMEIHPNLTTYRIFLD 651
Query: 200 GLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEP 259
+ + + G S Y +LI +C+ +A ++ +M+ G P
Sbjct: 652 TSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIP 711
Query: 260 NVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEIL 319
+ T+++LM G G H +A+ +M+ PN+ TY T+I GL G E + L
Sbjct: 712 DTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWL 771
Query: 320 DRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTV 379
M+ +G++P+ Y +ISG + + + EM+ G+ P +T+++ + V
Sbjct: 772 SEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANV 831
Query: 380 VQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCK 420
+ L +A +L M RG+S T+ +I CK
Sbjct: 832 GKML-------QARELLKEMGKRGVSPNTSTYCTMISGLCK 865
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 114/276 (41%), Gaps = 14/276 (5%)
Query: 30 KAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILL 89
+A +F + S G + + +I+ L + A ++ M+ +
Sbjct: 658 RADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFN 717
Query: 90 TICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKM 149
++ GY A+ + M + + +Y T+I L + +K + EM+
Sbjct: 718 SLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSR 777
Query: 150 GIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSE 209
G+ P + N LI K + ++ I+ EM G P + TY LI+ +G + +
Sbjct: 778 GMRPDDFTYNALISGQAK-IGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQ 836
Query: 210 AKELFNEMEEKGFSPSVVTYTSLIHGMC------------QSDNLGEAIRLLEEM-KKNG 256
A+EL EM ++G SP+ TY ++I G+C ++ L EA LL+EM ++ G
Sbjct: 837 ARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKG 896
Query: 257 IEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHN 292
P T + K G + A L+ K N
Sbjct: 897 YIPCNQTIYWISAAFSKPGMKVDAERFLKECYKKKN 932
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/461 (25%), Positives = 212/461 (45%), Gaps = 50/461 (10%)
Query: 11 KQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNG---FRHDHTTFGVMISRLVAANQFR 67
K ++S + L++ E D + A+ +F + E +N FR+ + ++I++L + F
Sbjct: 5 KSVSSFRLASLLRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFD 64
Query: 68 SAEGLLERMKQENCVV-TEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTV 126
+ +L +K + +V TE I + +GR P A+ +F +M ++ + T KS ++
Sbjct: 65 ELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSL 124
Query: 127 IDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRG 186
+ L++ +++ + + G P + NILI C D AL++F EM +
Sbjct: 125 LSALLKCGELEKMKERLSSIDEFG-KPDACTYNILIHG-CSQSGCFDDALKLFDEMVKKK 182
Query: 187 CQPDSYTYGTLINGLCRMGSVSEAKELFNEM-EEKGFSPSVVTYTSLIHGMCQSDNLGEA 245
+P T+GTLI+GLC+ V EA ++ ++M + G P+V Y SLI +CQ L A
Sbjct: 183 VKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFA 242
Query: 246 IRL-----------------------------------LEEMKKNGIEPNVFTYSTLMDG 270
+L LEEM + G +P+ TY+ L++G
Sbjct: 243 FKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLING 302
Query: 271 LCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPN 330
C S A +L+ MV K +P++++Y ++ + K+ EA + + M +G P+
Sbjct: 303 FCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPD 362
Query: 331 AGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSP 390
Y + G C +++AA +DEM+ G P R R+ +Q LC +
Sbjct: 363 TLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRD------RLEG-FLQKLCES-GKL 414
Query: 391 RAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARIL 431
+S RGI+ + D + +I CK ++ + +L
Sbjct: 415 EILSKVISSLHRGIAGDADVWSVMIPTMCKEPVISDSIDLL 455
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 139/280 (49%), Gaps = 9/280 (3%)
Query: 175 ALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIH 234
AL +F EMP CQ + +L++ L + G + + KE + ++E G P TY LIH
Sbjct: 102 ALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFG-KPDACTYNILIH 160
Query: 235 GMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHN-R 293
G QS +A++L +EM K ++P T+ TL+ GLCK +A+++ M+ + R
Sbjct: 161 GCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVR 220
Query: 294 PNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANF 353
P + Y +LI LC+ G+ S A ++ D +K +A +Y +IS A + +
Sbjct: 221 PTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMI 280
Query: 354 IDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDC 413
++EM G P T+ N ++ G C DS A ++ M +G+ ++ +++
Sbjct: 281 LEEMSEKGCKPDTVTY-------NVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNM 333
Query: 414 LIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
++ F + +A + E+M GC PD + +V GL
Sbjct: 334 ILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGL 373
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 152/344 (44%), Gaps = 15/344 (4%)
Query: 122 SYLTVIDILVEENHVKRAIAFYREMRKMGIPP------SVVSLNILIKALCKNKETIDSA 175
S + +L EN A+ +R P S++ +I+I L +K +
Sbjct: 8 SSFRLASLLRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELD 67
Query: 176 LQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHG 235
+ H + P + +IN R S A +F+EM + +V + SL+
Sbjct: 68 QVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSA 127
Query: 236 MCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPN 295
+ + L + L + + G +P+ TY+ L+ G + G A++L + MV K +P
Sbjct: 128 LLKCGELEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPT 186
Query: 296 MVTYGTLINGLCKEGKFSEAVEIL-DRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFI 354
VT+GTLI+GLCK+ + EA+++ D +++ G++P +Y +I C A
Sbjct: 187 GVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLK 246
Query: 355 DEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCL 414
DE G I A +S T++ L S + M +G + T++ L
Sbjct: 247 DEAYEGKIKVDAAIYS-------TLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVL 299
Query: 415 IKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKK 458
I FC D A R+L+EM+ G PD +++++G + KK
Sbjct: 300 INGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKK 343
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 178/374 (47%), Gaps = 14/374 (3%)
Query: 90 TICRGYGRVHRPLDAIRVFHKMEDFQLKFT--QKSYLTVID--ILVEENHVKRAIAFYRE 145
++ + YG + D +++F + Q F + ++L ++ ++ +
Sbjct: 90 SVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNL 149
Query: 146 MRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMG 205
M G+ P V+ +I +++LC+ +D A + E+ + PD+YTY L+ LC+
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGR-VDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCK 208
Query: 206 SVSEAKELFNEMEEK-GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTY 264
+ E +EM + P +V++T LI +C S NL EA+ L+ ++ G +P+ F Y
Sbjct: 209 DLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLY 268
Query: 265 STLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRL 324
+T+M G C +A+ + + M + P+ +TY TLI GL K G+ EA L M
Sbjct: 269 NTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVD 328
Query: 325 QGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLC 384
G +P+ Y +++G C A + ++EM G +P+ T+ NT++ GLC
Sbjct: 329 AGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTY-------NTLLHGLC 381
Query: 385 SNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKG 444
+ +LY M++ G+ +E + + L++ K G + +A + + + + D
Sbjct: 382 KARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDAS 441
Query: 445 IWDVVMGGL-WDRK 457
+ + L W +K
Sbjct: 442 AYSTLETTLKWLKK 455
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 163/338 (48%), Gaps = 13/338 (3%)
Query: 28 INKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAA------NQFRSAEGLLERMKQENC 81
+N V +F N FR +TF +++S A N R ++ + +
Sbjct: 101 VNDTVKLFQHILKSQPN-FRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQ 159
Query: 82 VVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIA 141
V T+ + ++C GRV D ++ + +T Y ++ L + +
Sbjct: 160 VTTDIAVRSLCET-GRVDEAKDLMKELTEKHSPPDTYT---YNFLLKHLCKCKDLHVVYE 215
Query: 142 FYREMRK-MGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLING 200
F EMR + P +VS ILI +C N + + A+ + ++ N G +PD + Y T++ G
Sbjct: 216 FVDEMRDDFDVKPDLVSFTILIDNVC-NSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKG 274
Query: 201 LCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPN 260
C + SEA ++ +M+E+G P +TY +LI G+ ++ + EA L+ M G EP+
Sbjct: 275 FCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPD 334
Query: 261 VFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILD 320
TY++LM+G+C+ G SL A+ LLE M + PN TY TL++GLCK + +E+ +
Sbjct: 335 TATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYE 394
Query: 321 RMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMV 358
M+ G+K + Y ++ + +A D V
Sbjct: 395 MMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAV 432
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 143/328 (43%), Gaps = 57/328 (17%)
Query: 43 SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENC---VVTEDILLT---ICRGYG 96
+NG D T + + L + A+ L++ + +++ T + LL C+
Sbjct: 152 NNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLH 211
Query: 97 RVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRA----------------- 139
V+ +D +R +DF +K S+ +ID + +++ A
Sbjct: 212 VVYEFVDEMR-----DDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCF 266
Query: 140 ------------------IAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHE 181
+ Y++M++ G+ P ++ N LI L K ++ A
Sbjct: 267 LYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGR-VEEARMYLKT 325
Query: 182 MPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDN 241
M + G +PD+ TY +L+NG+CR G A L EME +G +P+ TY +L+HG+C++
Sbjct: 326 MVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARL 385
Query: 242 LGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGT 301
+ + + L E MK +G++ Y+TL+ L K G +A E+ + V + + Y T
Sbjct: 386 MDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYST 445
Query: 302 LINGLCKEGKFSEAVEILDRMRLQGLKP 329
L L + L + + QGL P
Sbjct: 446 LETTL----------KWLKKAKEQGLVP 463
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 202/421 (47%), Gaps = 26/421 (6%)
Query: 46 FRHDHTTFGVMISRLVAANQFRSAEGLLERMKQE-----NCVVTEDILL-TICRGYGRVH 99
R D T G++I+ L + + A + E+M+ + N + + I T+ G +V
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVG 384
Query: 100 RPLDAIRVFHKME-DFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSL 158
R +A + +M+ + + +Y +ID ++ A M++ I P+VV++
Sbjct: 385 RLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTV 444
Query: 159 NILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEME 218
N ++ +C++ ++ A+ F +M G + + TY TLI+ C + +V +A + +M
Sbjct: 445 NTIVGGMCRH-HGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKML 503
Query: 219 EKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSL 278
E G SP Y +LI G+CQ +AIR++E++K+ G ++ Y+ L+ C ++
Sbjct: 504 EAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTE 563
Query: 279 QAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKII 338
+ E+L M + +P+ +TY TLI+ K F ++++MR GL P YG +I
Sbjct: 564 KVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVI 623
Query: 339 SGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMH-NTVVQGLCSNVDSP-----RA 392
+C+ +A +M LH +++ NTV+ + N S +A
Sbjct: 624 DAYCSVGELDEALKLFKDM------------GLHSKVNPNTVIYNILINAFSKLGNFGQA 671
Query: 393 FQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGG 452
L M+ + + ++T++ L KC ++ ++++EM+ C P++ +++M
Sbjct: 672 LSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMER 731
Query: 453 L 453
L
Sbjct: 732 L 732
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 164/354 (46%), Gaps = 55/354 (15%)
Query: 145 EMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRG------------------ 186
+M ++ I P VV+L ILI LCK++ +D AL++F +M RG
Sbjct: 319 KMDEVKIRPDVVTLGILINTLCKSRR-VDEALEVFEKM--RGKRTDDGNVIKADSIHFNT 375
Query: 187 --------------------------CQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
C P++ TY LI+G CR G + AKE+ + M+E
Sbjct: 376 LIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKED 435
Query: 221 GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQA 280
P+VVT +++ GMC+ L A+ +M+K G++ NV TY TL+ C + +A
Sbjct: 436 EIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKA 495
Query: 281 MELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISG 340
M E M+ P+ Y LI+GLC+ + +A+ ++++++ G + Y +I
Sbjct: 496 MYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGL 555
Query: 341 FCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMR 400
FC ++ + + +M G P T+ NT++ + D ++ MR
Sbjct: 556 FCDKNNTEKVYEMLTDMEKEGKKPDSITY-------NTLISFFGKHKDFESVERMMEQMR 608
Query: 401 TRGISIEIDTFDCLIKCFCKRGDLNKAARILEEM-ISDGCVPDKGIWDVVMGGL 453
G+ + T+ +I +C G+L++A ++ ++M + P+ I+++++
Sbjct: 609 EDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAF 662
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 185/392 (47%), Gaps = 19/392 (4%)
Query: 72 LLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILV 131
L E K++N +T + R +GR+ ++ V+ ++ D +K +Q + V+D+L+
Sbjct: 139 LYEIAKEKNIPLTVVATNLLIRWFGRMGMVNQSVLVYERL-DSNMKNSQVRNV-VVDVLL 196
Query: 132 EENHVKRAIAFYREM--RKMGIPPSVVSLNILIKALCKNKE-TIDSALQIFHEMPNRGCQ 188
V A EM ++ PP+ ++ +I++ + K + T + + + + G
Sbjct: 197 RNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVS 256
Query: 189 PDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRL 248
P+S I+ LC+ + A ++ +++ + + +L+ + ++ ++ L
Sbjct: 257 PNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDL 316
Query: 249 LEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHN------RPNMVTYGTL 302
+ +M + I P+V T L++ LCK +A+E+ E M K + + + + TL
Sbjct: 317 VLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTL 376
Query: 303 INGLCKEGKFSEAVEILDRMRLQG-LKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGG 361
I+GLCK G+ EA E+L RM+L+ PNA Y +I G+C A + A + M
Sbjct: 377 IDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDE 436
Query: 362 ISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKR 421
I P+ T NT+V G+C + A ++ M G+ + T+ LI C
Sbjct: 437 IKPNVVTV-------NTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSV 489
Query: 422 GDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
++ KA E+M+ GC PD I+ ++ GL
Sbjct: 490 SNVEKAMYWYEKMLEAGCSPDAKIYYALISGL 521
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 131/280 (46%), Gaps = 5/280 (1%)
Query: 28 INKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDI 87
+N AV+ F E G + + T+ +I + + A E+M + C I
Sbjct: 457 LNMAVVFFMDMEKE---GVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKI 513
Query: 88 LLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMR 147
+ G +V R DAIRV K+++ +Y +I + ++N+ ++ +M
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDME 573
Query: 148 KMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSV 207
K G P ++ N LI K+K+ +S ++ +M G P TYG +I+ C +G +
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKD-FESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGEL 632
Query: 208 SEAKELFNEME-EKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYST 266
EA +LF +M +P+ V Y LI+ + N G+A+ L EEMK + PNV TY+
Sbjct: 633 DEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNA 692
Query: 267 LMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGL 306
L L + ++L++ MV + PN +T L+ L
Sbjct: 693 LFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 4/200 (2%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
GF D + ++I N +L M++E T+ +G+ H+ ++
Sbjct: 541 GFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGK-HKDFES 599
Query: 105 I-RVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREM-RKMGIPPSVVSLNILI 162
+ R+ +M + L T +Y VID + A+ +++M + P+ V NILI
Sbjct: 600 VERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILI 659
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF 222
A K AL + EM + +P+ TY L L +L +EM E+
Sbjct: 660 NAFSK-LGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSC 718
Query: 223 SPSVVTYTSLIHGMCQSDNL 242
P+ +T L+ + SD L
Sbjct: 719 EPNQITMEILMERLSGSDEL 738
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 166/315 (52%), Gaps = 7/315 (2%)
Query: 20 QLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQE 79
Q++ K ++KA+ +F G R + T+ ++++ LVA Q +G++E K+
Sbjct: 313 QVLAKGKMVDKAIQVFSRMV---ETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKR- 368
Query: 80 NCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRA 139
+T+ I + R ++ +A R+F M F +K + SY+++++ L A
Sbjct: 369 --YMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEA 426
Query: 140 IAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLIN 199
I ++ + G+ + N + AL K K+ I +F +M G PD +TY LI
Sbjct: 427 IEMLSKIHEKGVVTDTMMYNTVFSALGKLKQ-ISHIHDLFEKMKKDGPSPDIFTYNILIA 485
Query: 200 GLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEP 259
R+G V EA +F E+E P +++Y SLI+ + ++ ++ EA +EM++ G+ P
Sbjct: 486 SFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNP 545
Query: 260 NVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEIL 319
+V TYSTLM+ K A L E M+ K +PN+VTY L++ L K G+ +EAV++
Sbjct: 546 DVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLY 605
Query: 320 DRMRLQGLKPNAGLY 334
+M+ QGL P++ Y
Sbjct: 606 SKMKQQGLTPDSITY 620
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/462 (22%), Positives = 201/462 (43%), Gaps = 73/462 (15%)
Query: 55 VMISRLVAANQFRSAEGLLERMKQENC---VVTEDILLTICRGYGRVHRPLDAIRVFHKM 111
+++SR ++F +L+ M + N + T +IL+ +G +R+ K
Sbjct: 141 LILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILIGF---FGNTEDLQMCLRLVKK- 196
Query: 112 EDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKET 171
+ LK +Y ++ + +A Y E+R+ G + + N+L+ AL K+++
Sbjct: 197 --WDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEK- 253
Query: 172 IDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTS 231
A Q+F +M R C+ D YTY +I + R+G EA LFNEM +G + +VV Y +
Sbjct: 254 ---ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNT 310
Query: 232 LIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTL------------MDG--------- 270
L+ + + + +AI++ M + G PN +TYS L +DG
Sbjct: 311 LMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYM 370
Query: 271 -----------LCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEIL 319
L K GH +A L M + + +Y +++ LC GK EA+E+L
Sbjct: 371 TQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEML 430
Query: 320 DRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSL-------- 371
++ +G+ + +Y + S + ++M G SP T+++
Sbjct: 431 SKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRV 490
Query: 372 --------------------HVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTF 411
+ +N+++ L N D A + M+ +G++ ++ T+
Sbjct: 491 GEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTY 550
Query: 412 DCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
L++CF K + A + EEM+ GC P+ +++++ L
Sbjct: 551 STLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCL 592
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 155/378 (41%), Gaps = 40/378 (10%)
Query: 104 AIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIK 163
A +VF M+ + + +Y +I + A+ + EM G+ +VV N L++
Sbjct: 254 ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQ 313
Query: 164 ALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLIN------------------------ 199
L K K +D A+Q+F M GC+P+ YTY L+N
Sbjct: 314 VLAKGK-MVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQ 372
Query: 200 --------GLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEE 251
L ++G VSEA LF +M +Y S++ +C + EAI +L +
Sbjct: 373 GIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSK 432
Query: 252 MKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGK 311
+ + G+ + Y+T+ L K +L E M P++ TY LI + G+
Sbjct: 433 IHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGE 492
Query: 312 FSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSL 371
EA+ I + + KP+ Y +I+ +A EM G++P T+S
Sbjct: 493 VDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYS- 551
Query: 372 HVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARIL 431
T+++ A+ L+ M +G I T++ L+ C K G +A +
Sbjct: 552 ------TLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLY 605
Query: 432 EEMISDGCVPDKGIWDVV 449
+M G PD + V+
Sbjct: 606 SKMKQQGLTPDSITYTVL 623
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 204/449 (45%), Gaps = 48/449 (10%)
Query: 10 PKQITSSLVEQLIKAEKDINKAVLMFDSATAEYS---NGFRHDHTTFGVMISRLVAANQF 66
P +T ++ + + +++A+ +F+ + + N + D F +I L +
Sbjct: 327 PDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRL 386
Query: 67 RSAEGLLERMK-QENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLT 125
+ AE LL RMK +E CV + GY R + A V +M++ ++K
Sbjct: 387 KEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIK-------- 438
Query: 126 VIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR 185
P+VV++N ++ +C++ ++ A+ F +M
Sbjct: 439 ---------------------------PNVVTVNTIVGGMCRH-HGLNMAVVFFMDMEKE 470
Query: 186 GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEA 245
G + + TY TLI+ C + +V +A + +M E G SP Y +LI G+CQ +A
Sbjct: 471 GVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDA 530
Query: 246 IRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING 305
IR++E++K+ G ++ Y+ L+ C ++ + E+L M + +P+ +TY TLI+
Sbjct: 531 IRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISF 590
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVL-GGISP 364
K F ++++MR GL P YG +I +C+ +A +M L ++P
Sbjct: 591 FGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNP 650
Query: 365 SRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDL 424
+ ++N ++ + +A L M+ + + ++T++ L KC ++
Sbjct: 651 NTV-------IYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQG 703
Query: 425 NKAARILEEMISDGCVPDKGIWDVVMGGL 453
++++EM+ C P++ +++M L
Sbjct: 704 ETLLKLMDEMVEQSCEPNQITMEILMERL 732
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 164/354 (46%), Gaps = 55/354 (15%)
Query: 145 EMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRG------------------ 186
+M ++ I P VV+L ILI LCK++ +D AL++F +M RG
Sbjct: 319 KMDEVKIRPDVVTLGILINTLCKSRR-VDEALEVFEQM--RGKRTDDGNVIKADSIHFNT 375
Query: 187 --------------------------CQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
C P++ TY LI+G CR G + AKE+ + M+E
Sbjct: 376 LIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKED 435
Query: 221 GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQA 280
P+VVT +++ GMC+ L A+ +M+K G++ NV TY TL+ C + +A
Sbjct: 436 EIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKA 495
Query: 281 MELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISG 340
M E M+ P+ Y LI+GLC+ + +A+ ++++++ G + Y +I
Sbjct: 496 MYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGL 555
Query: 341 FCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMR 400
FC ++ + + +M G P T+ NT++ + D ++ MR
Sbjct: 556 FCDKNNAEKVYEMLTDMEKEGKKPDSITY-------NTLISFFGKHKDFESVERMMEQMR 608
Query: 401 TRGISIEIDTFDCLIKCFCKRGDLNKAARILEEM-ISDGCVPDKGIWDVVMGGL 453
G+ + T+ +I +C G+L++A ++ ++M + P+ I+++++
Sbjct: 609 EDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAF 662
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 185/392 (47%), Gaps = 19/392 (4%)
Query: 72 LLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILV 131
L E K++N +T + R +GR+ ++ V+ ++ D +K +Q + V+D+L+
Sbjct: 139 LYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERL-DSNMKNSQVRNV-VVDVLL 196
Query: 132 EENHVKRAIAFYREM--RKMGIPPSVVSLNILIKALCKNKE-TIDSALQIFHEMPNRGCQ 188
V A EM ++ PP+ ++ +I++ + K + T + + + + G
Sbjct: 197 RNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVS 256
Query: 189 PDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRL 248
P+S I+ LC+ + A ++ +++ + + +L+ + ++ ++ L
Sbjct: 257 PNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDL 316
Query: 249 LEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHN------RPNMVTYGTL 302
+ +M + I P+V T L++ LCK +A+E+ E M K + + + + TL
Sbjct: 317 VLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTL 376
Query: 303 INGLCKEGKFSEAVEILDRMRLQG-LKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGG 361
I+GLCK G+ EA E+L RM+L+ PNA Y +I G+C A + A + M
Sbjct: 377 IDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDE 436
Query: 362 ISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKR 421
I P+ T NT+V G+C + A ++ M G+ + T+ LI C
Sbjct: 437 IKPNVVTV-------NTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSV 489
Query: 422 GDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
++ KA E+M+ GC PD I+ ++ GL
Sbjct: 490 SNVEKAMYWYEKMLEAGCSPDAKIYYALISGL 521
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 4/200 (2%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
GF D + ++I N +L M++E T+ +G+ H+ ++
Sbjct: 541 GFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGK-HKDFES 599
Query: 105 I-RVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREM-RKMGIPPSVVSLNILI 162
+ R+ +M + L T +Y VID + A+ +++M + P+ V NILI
Sbjct: 600 VERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILI 659
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF 222
A K AL + EM + +P+ TY L L +L +EM E+
Sbjct: 660 NAFSK-LGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSC 718
Query: 223 SPSVVTYTSLIHGMCQSDNL 242
P+ +T L+ + SD L
Sbjct: 719 EPNQITMEILMERLSGSDEL 738
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 191/423 (45%), Gaps = 40/423 (9%)
Query: 44 NGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLD 103
+ FRHDH +F M L A ++F LL + C + I
Sbjct: 107 DTFRHDHDSFLWMSRSLAATHRFDDLYRLLSFVAANPCPCSSGI---------------- 150
Query: 104 AIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKM-GIPPSVVSLNILI 162
F + + + ID + A+ + M+++ P+V N ++
Sbjct: 151 ----------FSCPELEPIFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVV 200
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF 222
K+ + +D AL+ + M +PD T+ LING CR A +LF EM+EKG
Sbjct: 201 NGYVKSGD-MDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGC 259
Query: 223 SPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAME 282
P+VV++ +LI G S + E +++ EM + G + T L+DGLC+ G A
Sbjct: 260 EPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACG 319
Query: 283 LLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFC 342
L+ ++ K P+ YG+L+ LC E K A+E+++ + +G P ++ G
Sbjct: 320 LVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLR 379
Query: 343 AASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTR 402
+ + A+ F+++M+ GI P T++L +R LCS+ S A +L L ++
Sbjct: 380 KSGRTEKASGFMEKMMNAGILPDSVTFNLLLR-------DLCSSDHSTDANRLRLLASSK 432
Query: 403 GISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL-----WDRK 457
G + T+ L+ F K G + ++ EM+ +PD ++ +M GL + RK
Sbjct: 433 GYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSRK 492
Query: 458 KVR 460
+VR
Sbjct: 493 QVR 495
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 141/301 (46%), Gaps = 5/301 (1%)
Query: 13 ITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGL 72
+ +++V +K+ D++KA+ + E + + D TF ++I+ +++F A L
Sbjct: 195 VYNTVVNGYVKS-GDMDKALRFYQRMGKERA---KPDVCTFNILINGYCRSSKFDLALDL 250
Query: 73 LERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVE 132
MK++ C T+ RG+ + + +++ ++M + +F++ + ++D L
Sbjct: 251 FREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCR 310
Query: 133 ENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSY 192
E V A ++ + PS L++ LC + + A+++ E+ +G P
Sbjct: 311 EGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAV-RAMEMMEELWKKGQTPCFI 369
Query: 193 TYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEM 252
TL+ GL + G +A +M G P VT+ L+ +C SD+ +A RL
Sbjct: 370 ACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLA 429
Query: 253 KKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKF 312
G EP+ TY L+ G K G + L+ M+ K P++ TY L++GL GKF
Sbjct: 430 SSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKF 489
Query: 313 S 313
S
Sbjct: 490 S 490
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 157/338 (46%), Gaps = 37/338 (10%)
Query: 150 GIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSE 209
G P+VV+ LI CK E +D A +F M RG +PD Y TLI+G + G +
Sbjct: 281 GPAPNVVTFCTLINGFCKRGE-MDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGM 339
Query: 210 AKELFNEMEEKG-----------------------------------FSPSVVTYTSLIH 234
+LF++ KG SP+VVTYT LI
Sbjct: 340 GHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIK 399
Query: 235 GMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRP 294
G+CQ + EA + ++ K G+EP++ TYS+L+DG CK G+ L E M+ P
Sbjct: 400 GLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP 459
Query: 295 NMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFI 354
++V YG L++GL K+G A+ +M Q ++ N ++ +I G+C + + +A
Sbjct: 460 DVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519
Query: 355 DEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCL 414
M + GI P AT++ +R+ + + C ++ QL+ M+ IS +I + +
Sbjct: 520 RLMGIYGIKPDVATFTTVMRV-SIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVV 578
Query: 415 IKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGG 452
I K + A++ +I PD ++ ++ G
Sbjct: 579 IHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICG 616
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 163/325 (50%), Gaps = 9/325 (2%)
Query: 126 VIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR 185
V+D L + V +A+ F+R + + G +VS N ++K L + + I+ A ++ + +
Sbjct: 223 VLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL--SVDQIEVASRLLSLVLDC 280
Query: 186 GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEA 245
G P+ T+ TLING C+ G + A +LF ME++G P ++ Y++LI G ++ LG
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 246 IRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING 305
+L + G++ +V +S+ +D K G A + + M+ + PN+VTY LI G
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPS 365
LC++G+ EA + ++ +G++P+ Y +I GFC + + ++M+ G P
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460
Query: 366 RATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLN 425
V ++ +V GL A + + M + I + + F+ LI +C+ +
Sbjct: 461 -------VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD 513
Query: 426 KAARILEEMISDGCVPDKGIWDVVM 450
+A ++ M G PD + VM
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVM 538
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 160/326 (49%), Gaps = 7/326 (2%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
G+ D +GV++ L A +M ++ + + ++ G+ R++R +A
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEEN----HVKRAIAF--YREMRKMGIPPSVVSL 158
++VF M + +K ++ TV+ + + E+ H+K I + M++ I +
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVC 575
Query: 159 NILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEME 218
N++I L K I+ A + F+ + +PD TY T+I G C + + EA+ +F ++
Sbjct: 576 NVVIHLLFKCHR-IEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLK 634
Query: 219 EKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSL 278
F P+ VT T LIH +C+++++ AIR+ M + G +PN TY LMD K
Sbjct: 635 VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIE 694
Query: 279 QAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKII 338
+ +L E M K P++V+Y +I+GLCK G+ EA I + L P+ Y +I
Sbjct: 695 GSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 754
Query: 339 SGFCAASSYQDAANFIDEMVLGGISP 364
G+C +AA + M+ G+ P
Sbjct: 755 RGYCKVGRLVEAALLYEHMLRNGVKP 780
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 200/445 (44%), Gaps = 39/445 (8%)
Query: 51 TTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILL--TICRGYGRVHRPLDAIRVF 108
TF +I+ + A L + M+Q + D++ T+ GY + ++F
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQRG--IEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 109 HKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKN 168
+ +K + + ID+ V+ + A Y+ M GI P+VV+ ILIK LC++
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404
Query: 169 KETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVT 228
I A ++ ++ RG +P TY +LI+G C+ G++ L+ +M + G+ P VV
Sbjct: 405 GR-IYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463
Query: 229 YTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMV 288
Y L+ G+ + + A+R +M I NV +++L+DG C+ +A+++ +M
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMG 523
Query: 289 TKHNRPNMVTYGTLI------NGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFC 342
+P++ T+ T++ + CK K + +++ D M+ + + + +I
Sbjct: 524 IYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLF 583
Query: 343 AASSYQDAANFIDEMVLGGISPSRATWSLHV-------RMH----------------NTV 379
+DA+ F + ++ G + P T++ + R+ NTV
Sbjct: 584 KCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTV 643
Query: 380 -----VQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEM 434
+ LC N D A +++ M +G T+ CL+ F K D+ + ++ EEM
Sbjct: 644 TLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM 703
Query: 435 ISDGCVPDKGIWDVVMGGLWDRKKV 459
G P + +++ GL R +V
Sbjct: 704 QEKGISPSIVSYSIIIDGLCKRGRV 728
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 195/443 (44%), Gaps = 57/443 (12%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENC---VVTEDILLT-ICRGYGRVHR 100
G + D F I V + +A + +RM + VVT IL+ +C+ GR++
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD-GRIY- 408
Query: 101 PLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNI 160
+A ++ ++ ++ + +Y ++ID + +++ A Y +M KMG PP VV +
Sbjct: 409 --EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGV 466
Query: 161 LIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
L+ L K + A++ +M + + + + +LI+G CR+ EA ++F M
Sbjct: 467 LVDGLSKQGLML-HAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIY 525
Query: 221 GFSPSVVTYTSLIH------GMCQSDNLGEAIRLLEEMKKNGI----------------- 257
G P V T+T+++ C+ ++L + M++N I
Sbjct: 526 GIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKC 585
Query: 258 ------------------EPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTY 299
EP++ TY+T++ G C +A + E++ PN VT
Sbjct: 586 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTL 645
Query: 300 GTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVL 359
LI+ LCK A+ + M +G KPNA YG ++ F + + + +EM
Sbjct: 646 TILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE 705
Query: 360 GGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFC 419
GISPS ++S+ ++ GLC A ++ + ++ + LI+ +C
Sbjct: 706 KGISPSIVSYSI-------IIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYC 758
Query: 420 KRGDLNKAARILEEMISDGCVPD 442
K G L +AA + E M+ +G PD
Sbjct: 759 KVGRLVEAALLYEHMLRNGVKPD 781
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 157/319 (49%), Gaps = 10/319 (3%)
Query: 136 VKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYT-Y 194
V +A+ + ++G+ S+ ++ +L + +D F ++ G +P + +
Sbjct: 162 VDKALEIFVYSTQLGVVIPQDSVYRMLNSLI-GSDRVDLIADHFDKLCRGGIEPSGVSAH 220
Query: 195 GTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKK 254
G +++ L G V++A + + E+GF +V+ ++ G+ D + A RLL +
Sbjct: 221 GFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLD 279
Query: 255 NGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSE 314
G PNV T+ TL++G CK G +A +L ++M + P+++ Y TLI+G K G
Sbjct: 280 CGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGM 339
Query: 315 AVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVR 374
++ + +G+K + ++ I + + A+ M+ GISP+ T+++
Sbjct: 340 GHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI--- 396
Query: 375 MHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEM 434
+++GLC + AF +Y + RG+ I T+ LI FCK G+L + E+M
Sbjct: 397 ----LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
Query: 435 ISDGCVPDKGIWDVVMGGL 453
I G PD I+ V++ GL
Sbjct: 453 IKMGYPPDVVIYGVLVDGL 471
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 155/316 (49%), Gaps = 37/316 (11%)
Query: 91 ICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEEN-HVKRAIAFYREMRKM 149
+ YGR +AI VF+ M+++ L+ +Y VID + K+ F+ EM++
Sbjct: 274 LISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN 333
Query: 150 GIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSE 209
G+ P ++ N L+ A+C ++A +F EM NR + D ++Y TL++ +C+ G +
Sbjct: 334 GVQPDRITFNSLL-AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDL 392
Query: 210 AKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMD 269
A E+ +M K P+VV+Y+++I G ++ EA+ L EM+ GI + +Y+TL+
Sbjct: 393 AFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLS 452
Query: 270 GLCKGGHSLQAMELLEMMVT-----------------------------------KHNRP 294
K G S +A+++L M + +H P
Sbjct: 453 IYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLP 512
Query: 295 NMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFI 354
N++TY TLI+G K G + EA+EI + GL+ + LY +I C A + I
Sbjct: 513 NLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLI 572
Query: 355 DEMVLGGISPSRATWS 370
DEM GISP+ T++
Sbjct: 573 DEMTKEGISPNVVTYN 588
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 122/452 (26%), Positives = 204/452 (45%), Gaps = 39/452 (8%)
Query: 30 KAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAAN-QFRSAEGLLERMKQENCV----VT 84
+A+ +F+S EY G R + T+ +I +F+ + M Q N V +T
Sbjct: 286 EAISVFNS-MKEY--GLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM-QRNGVQPDRIT 341
Query: 85 EDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYR 144
+ LL +C G A +F +M + +++ SY T++D + + + A
Sbjct: 342 FNSLLAVCSRGGLWEA---ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILA 398
Query: 145 EMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRM 204
+M I P+VVS + +I K D AL +F EM G D +Y TL++ ++
Sbjct: 399 QMPVKRIMPNVVSYSTVIDGFAKAGR-FDEALNLFGEMRYLGIALDRVSYNTLLSIYTKV 457
Query: 205 GSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTY 264
G EA ++ EM G VVTY +L+ G + E ++ EMK+ + PN+ TY
Sbjct: 458 GRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTY 517
Query: 265 STLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRL 324
STL+DG KGG +AME+ + R ++V Y LI+ LCK G AV ++D M
Sbjct: 518 STLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTK 577
Query: 325 QGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISP--SRATWSLHVRMHNTVVQ- 381
+G+ PN Y II F +++ +A++ + GG P S A +L N V+Q
Sbjct: 578 EGISPNVVTYNSIIDAFGRSATMDRSADYSN----GGSLPFSSSALSALTETEGNRVIQL 633
Query: 382 -GLCSNVDSPRA--------------FQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNK 426
G + + R +++ M I + TF ++ +
Sbjct: 634 FGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFED 693
Query: 427 AARILEEMISDGCVPDKGIWDVVMGGLWDRKK 458
A+ +LEE+ + D ++ VV G L +++
Sbjct: 694 ASMLLEEL----RLFDNKVYGVVHGLLMGQRE 721
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 117/244 (47%), Gaps = 7/244 (2%)
Query: 217 MEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGH 276
M + VV T+++ +C+ N A L EM + GI PNV TY+ ++D C G
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 277 SLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGK 336
A +LL M+ K P++VT+ LIN KE K SEA EI M + P Y
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 337 IISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLY 396
+I GFC DA +D M G SP T+S T++ G C +++
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFS-------TLINGYCKAKRVDNGMEIF 173
Query: 397 LSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDR 456
M RGI T+ LI FC+ GDL+ A +L EMIS G PD + ++ GL +
Sbjct: 174 CEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSK 233
Query: 457 KKVR 460
K++R
Sbjct: 234 KELR 237
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 129/250 (51%), Gaps = 8/250 (3%)
Query: 146 MRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMG 205
M + I VV ++ LCK+ I+ A +F EM +G P+ TY +I+ C G
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHIN-AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSG 59
Query: 206 SVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYS 265
S+A +L M EK +P +VT+++LI+ + + EA + +EM + I P TY+
Sbjct: 60 RWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYN 119
Query: 266 TLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQ 325
+++DG CK A +L+ M +K P++VT+ TLING CK + +EI M +
Sbjct: 120 SMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR 179
Query: 326 GLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCS 385
G+ N Y +I GFC A + ++EM+ G++P T+ + ++ GLCS
Sbjct: 180 GIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITF-------HCMLAGLCS 232
Query: 386 NVDSPRAFQL 395
+ +AF +
Sbjct: 233 KKELRKAFAI 242
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 123/232 (53%), Gaps = 1/232 (0%)
Query: 126 VIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR 185
++D L ++ + A + EM + GI P+V++ N +I + C + D A Q+ M +
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSD-ADQLLRHMIEK 74
Query: 186 GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEA 245
PD T+ LIN + VSEA+E++ EM P+ +TY S+I G C+ D + +A
Sbjct: 75 QINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDA 134
Query: 246 IRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING 305
R+L+ M G P+V T+STL++G CK ME+ M + N VTY TLI+G
Sbjct: 135 KRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG 194
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEM 357
C+ G A ++L+ M G+ P+ + +++G C+ + A ++++
Sbjct: 195 FCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 124/247 (50%), Gaps = 7/247 (2%)
Query: 188 QPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIR 247
+ D +++ LC+ G+ A+ LF EM EKG P+V+TY +I C S +A +
Sbjct: 7 KADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQ 66
Query: 248 LLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLC 307
LL M + I P++ T+S L++ K +A E+ + M+ P +TY ++I+G C
Sbjct: 67 LLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC 126
Query: 308 KEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRA 367
K+ + +A +LD M +G P+ + +I+G+C A + EM GI +
Sbjct: 127 KQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV 186
Query: 368 TWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKA 427
T++ T++ G C D A L M + G++ + TF C++ C + +L KA
Sbjct: 187 TYT-------TLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKA 239
Query: 428 ARILEEM 434
ILE++
Sbjct: 240 FAILEDL 246
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 125/242 (51%), Gaps = 5/242 (2%)
Query: 82 VVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIA 141
V++ I+ +C+ + +A +F +M + + +Y +ID A
Sbjct: 11 VISTAIVDRLCKDGNHI----NAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQ 66
Query: 142 FYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGL 201
R M + I P +V+ + LI A K ++ + A +I+ EM P + TY ++I+G
Sbjct: 67 LLRHMIEKQINPDIVTFSALINAFVKERK-VSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 202 CRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNV 261
C+ V +AK + + M KG SP VVT+++LI+G C++ + + + EM + GI N
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 262 FTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDR 321
TY+TL+ G C+ G A +LL M++ P+ +T+ ++ GLC + + +A IL+
Sbjct: 186 VTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILED 245
Query: 322 MR 323
++
Sbjct: 246 LQ 247
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 125/245 (51%), Gaps = 9/245 (3%)
Query: 13 ITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGL 72
I++++V++L K IN L T + G + T+ MI + ++ A+ L
Sbjct: 12 ISTAIVDRLCKDGNHINAQNLF----TEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQL 67
Query: 73 LERMKQENCVVTEDILL--TICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDIL 130
L M ++ + DI+ + + + + +A ++ +M + + T +Y ++ID
Sbjct: 68 LRHMIEKQ--INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 131 VEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPD 190
+++ V A M G P VV+ + LI CK K +D+ ++IF EM RG +
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR-VDNGMEIFCEMHRRGIVAN 184
Query: 191 SYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLE 250
+ TY TLI+G C++G + A++L NEM G +P +T+ ++ G+C L +A +LE
Sbjct: 185 TVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILE 244
Query: 251 EMKKN 255
+++K+
Sbjct: 245 DLQKS 249
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/476 (23%), Positives = 195/476 (40%), Gaps = 88/476 (18%)
Query: 44 NGFRHDHTTFGVMISRLVAANQFRSAEGL-----LERMKQE-NCVVTEDILLTICRGYGR 97
+G++ D + ++I L +N+ S L +ER K E + + DI++ G+ +
Sbjct: 226 DGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIM----GFAK 281
Query: 98 VHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVS 157
P A+++ + L + +++I L + A A + E+R+ GI P +
Sbjct: 282 SGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRA 341
Query: 158 LNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEM 217
N L+K K D A + EM RG PD +TY LI+ G A+ + EM
Sbjct: 342 YNALLKGYVKTGPLKD-AESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEM 400
Query: 218 EEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKK----------------------- 254
E P+ ++ L+ G + ++L+EMK
Sbjct: 401 EAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCL 460
Query: 255 ------------NGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMM--------VTKHN-- 292
GIEP+ T++TL+D CK G + A E+ E M T +N
Sbjct: 461 DHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIM 520
Query: 293 -------------------------RPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGL 327
PN+VT+ TL++ K G+F++A+E L+ M+ GL
Sbjct: 521 INSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGL 580
Query: 328 KPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNV 387
KP++ +Y +I+ + + A N M G+ PS + N+++ +
Sbjct: 581 KPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPS-------LLALNSLINAFGEDR 633
Query: 388 DSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDK 443
AF + M+ G+ ++ T+ L+K + K + EEMI GC PD+
Sbjct: 634 RDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDR 689
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 156/327 (47%), Gaps = 1/327 (0%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
G D T+ ++I V A ++ SA +L+ M+ + + + G+
Sbjct: 369 GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKT 428
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
+V +M+ +K ++ Y VID + N + A+ + M GI P V+ N LI
Sbjct: 429 FQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDC 488
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
CK+ I A ++F M RGC P + TY +IN + K L +M+ +G P
Sbjct: 489 HCKHGRHI-VAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILP 547
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
+VVT+T+L+ +S +AI LEEMK G++P+ Y+ L++ + G S QA+
Sbjct: 548 NVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAF 607
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAA 344
+M + +P+++ +LIN ++ + +EA +L M+ G+KP+ Y ++
Sbjct: 608 RVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRV 667
Query: 345 SSYQDAANFIDEMVLGGISPSRATWSL 371
+Q +EM++ G P R S+
Sbjct: 668 DKFQKVPVVYEEMIMSGCKPDRKARSM 694
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 165/375 (44%), Gaps = 13/375 (3%)
Query: 70 EGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDI 129
E L KQ +T + L+ C + + L+ I + + +Q F +Y VI
Sbjct: 185 EAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKM-RQDGYQSDFV--NYSLVIQS 241
Query: 130 LVEENHVKRA--IAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGC 187
L N + + Y+E+ + + V +N +I K+ + ALQ+ G
Sbjct: 242 LTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDP-SKALQLLGMAQATGL 300
Query: 188 QPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIR 247
+ T ++I+ L G EA+ LF E+ + G P Y +L+ G ++ L +A
Sbjct: 301 SAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAES 360
Query: 248 LLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLC 307
++ EM+K G+ P+ TYS L+D G A +L+ M +PN + L+ G
Sbjct: 361 MVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFR 420
Query: 308 KEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRA 367
G++ + ++L M+ G+KP+ Y +I F + A D M+ GI P R
Sbjct: 421 DRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRV 480
Query: 368 TWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKA 427
TW NT++ C + A +++ +M RG T++ +I + + +
Sbjct: 481 TW-------NTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDM 533
Query: 428 ARILEEMISDGCVPD 442
R+L +M S G +P+
Sbjct: 534 KRLLGKMKSQGILPN 548
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 177/393 (45%), Gaps = 16/393 (4%)
Query: 69 AEGLLERMKQENCVVTEDILLTIC-RGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVI 127
A ++ +++ N + ++L +I GR + +A + K T +Y +I
Sbjct: 150 AYAVVSWLQKHNLCFSYELLYSILIHALGRSEKLYEAFLLSQKQ-----TLTPLTYNALI 204
Query: 128 DILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSA--LQIFHEMPNR 185
N +++A+ +MR+ G V+ +++I++L ++ + IDS L+++ E+
Sbjct: 205 GACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNK-IDSVMLLRLYKEIERD 263
Query: 186 GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEA 245
+ D +I G + G S+A +L + G S T S+I + S EA
Sbjct: 264 KLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEA 323
Query: 246 IRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING 305
L EE++++GI+P Y+ L+ G K G A ++ M + P+ TY LI+
Sbjct: 324 EALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDA 383
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPS 365
G++ A +L M ++PN+ ++ ++++GF +Q + EM G+ P
Sbjct: 384 YVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPD 443
Query: 366 RATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLN 425
R + +N V+ A + M + GI + T++ LI C CK G
Sbjct: 444 R-------QFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHI 496
Query: 426 KAARILEEMISDGCVPDKGIWDVVMGGLWDRKK 458
A + E M GC+P +++++ D+++
Sbjct: 497 VAEEMFEAMERRGCLPCATTYNIMINSYGDQER 529
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 109/253 (43%), Gaps = 4/253 (1%)
Query: 28 INKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDI 87
++ A+ FD +E G D T+ +I + AE + E M++ C+
Sbjct: 460 LDHAMTTFDRMLSE---GIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATT 516
Query: 88 LLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMR 147
+ YG R D R+ KM+ + ++ T++D+ + AI EM+
Sbjct: 517 YNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMK 576
Query: 148 KMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSV 207
+G+ PS N LI A + + + A+ F M + G +P +LIN
Sbjct: 577 SVGLKPSSTMYNALINAYAQ-RGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRD 635
Query: 208 SEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTL 267
+EA + M+E G P VVTYT+L+ + + D + + EEM +G +P+ S L
Sbjct: 636 AEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSML 695
Query: 268 MDGLCKGGHSLQA 280
L +L+A
Sbjct: 696 RSALRYMKQTLRA 708
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 163/325 (50%), Gaps = 9/325 (2%)
Query: 126 VIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR 185
V+D L + V +A+ F+R + + G +VS N ++K L + + I+ A ++ + +
Sbjct: 223 VLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL--SVDQIEVASRLLSLVLDC 280
Query: 186 GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEA 245
G P+ T+ TLING C+ G + A +LF ME++G P ++ Y++LI G ++ LG
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 246 IRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING 305
+L + G++ +V +S+ +D K G A + + M+ + PN+VTY LI G
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPS 365
LC++G+ EA + ++ +G++P+ Y +I GFC + + ++M+ G P
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460
Query: 366 RATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLN 425
V ++ +V GL A + + M + I + + F+ LI +C+ +
Sbjct: 461 -------VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD 513
Query: 426 KAARILEEMISDGCVPDKGIWDVVM 450
+A ++ M G PD + VM
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVM 538
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 204/474 (43%), Gaps = 68/474 (14%)
Query: 51 TTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILL--TICRGYGRVHRPLDAIRVF 108
TF +I+ + A L + M+Q + D++ T+ GY + ++F
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQRG--IEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 109 HKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKN 168
+ +K + + ID+ V+ + A Y+ M GI P+VV+ ILIK LC++
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404
Query: 169 KETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVT 228
I A ++ ++ RG +P TY +LI+G C+ G++ L+ +M + G+ P VV
Sbjct: 405 GR-IYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463
Query: 229 YTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMV 288
Y L+ G+ + + A+R +M I NV +++L+DG C+ +A+++ +M
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMG 523
Query: 289 TKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCA----- 343
+P++ T+ T++ EG+ EA+ + RM GL+P+A Y +I FC
Sbjct: 524 IYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPT 583
Query: 344 ------------------------------ASSYQDAANFIDEMVLGGISPSRATWSLHV 373
+DA+ F + ++ G + P T++ +
Sbjct: 584 IGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 643
Query: 374 -------RMH----------------NTV-----VQGLCSNVDSPRAFQLYLSMRTRGIS 405
R+ NTV + LC N D A +++ M +G
Sbjct: 644 CGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK 703
Query: 406 IEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
T+ CL+ F K D+ + ++ EEM G P + +++ GL R +V
Sbjct: 704 PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRV 757
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 157/340 (46%), Gaps = 43/340 (12%)
Query: 150 GIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSE 209
G P+VV+ LI CK E +D A +F M RG +PD Y TLI+G + G +
Sbjct: 281 GPAPNVVTFCTLINGFCKRGE-MDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGM 339
Query: 210 AKELFNEMEEKG-----------------------------------FSPSVVTYTSLIH 234
+LF++ KG SP+VVTYT LI
Sbjct: 340 GHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIK 399
Query: 235 GMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRP 294
G+CQ + EA + ++ K G+EP++ TYS+L+DG CK G+ L E M+ P
Sbjct: 400 GLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP 459
Query: 295 NMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFI 354
++V YG L++GL K+G A+ +M Q ++ N ++ +I G+C + + +A
Sbjct: 460 DVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519
Query: 355 DEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCL 414
M + GI P AT++ +R+ ++++G A L+ M G+ + + L
Sbjct: 520 RLMGIYGIKPDVATFTTVMRV--SIMEGRLE-----EALFLFFRMFKMGLEPDALAYCTL 572
Query: 415 IKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLW 454
I FCK ++ + M + D + +VV+ L+
Sbjct: 573 IDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLF 612
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 173/399 (43%), Gaps = 45/399 (11%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
G+ D +GV++ L A +M ++ + + ++ G+ R++R +A
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
++VF M + +K ++ TV+ + + E ++ A+ + M KMG+ P ++ LI A
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDA 575
Query: 165 LCKN-KETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFS 223
CK+ K TI LQ+F M D +I+ L + + +A + FN + E
Sbjct: 576 FCKHMKPTI--GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME 633
Query: 224 PSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMEL 283
P +VTY ++I G C L EA R+ E +K PN T + L+ LCK A+ +
Sbjct: 634 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 693
Query: 284 LEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCA 343
+M K ++PN VTYG L++ K + ++ + M+ +G+ P+ Y II G C
Sbjct: 694 FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 753
Query: 344 ASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRG 403
+A N + + + P +++
Sbjct: 754 RGRVDEATNIFHQAIDAKLLPDVVAYAI-------------------------------- 781
Query: 404 ISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPD 442
LI+ +CK G L +AA + E M+ +G PD
Sbjct: 782 ----------LIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/447 (23%), Positives = 193/447 (43%), Gaps = 51/447 (11%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENC---VVTEDILLT-ICRGYGRVHR 100
G + D F I V + +A + +RM + VVT IL+ +C+ GR++
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD-GRIY- 408
Query: 101 PLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNI 160
+A ++ ++ ++ + +Y ++ID + +++ A Y +M KMG PP VV +
Sbjct: 409 --EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGV 466
Query: 161 LIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
L+ L K + A++ +M + + + + +LI+G CR+ EA ++F M
Sbjct: 467 LVDGLSKQGLML-HAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIY 525
Query: 221 GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQA 280
G P V T+T+++ L EA+ L M K G+EP+ Y TL+D CK
Sbjct: 526 GIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIG 585
Query: 281 MELLEMM-----------------------------------VTKHNRPNMVTYGTLING 305
++L ++M + P++VTY T+I G
Sbjct: 586 LQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICG 645
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPS 365
C + EA I + +++ PN +I C + A M G P+
Sbjct: 646 YCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPN 705
Query: 366 RATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLN 425
T+ ++ +VD +F+L+ M+ +GIS I ++ +I CKRG ++
Sbjct: 706 AVTY-------GCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVD 758
Query: 426 KAARILEEMISDGCVPDKGIWDVVMGG 452
+A I + I +PD + +++ G
Sbjct: 759 EATNIFHQAIDAKLLPDVVAYAILIRG 785
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 157/319 (49%), Gaps = 10/319 (3%)
Query: 136 VKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYT-Y 194
V +A+ + ++G+ S+ ++ +L + +D F ++ G +P + +
Sbjct: 162 VDKALEIFVYSTQLGVVIPQDSVYRMLNSLI-GSDRVDLIADHFDKLCRGGIEPSGVSAH 220
Query: 195 GTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKK 254
G +++ L G V++A + + E+GF +V+ ++ G+ D + A RLL +
Sbjct: 221 GFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLD 279
Query: 255 NGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSE 314
G PNV T+ TL++G CK G +A +L ++M + P+++ Y TLI+G K G
Sbjct: 280 CGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGM 339
Query: 315 AVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVR 374
++ + +G+K + ++ I + + A+ M+ GISP+ T+++
Sbjct: 340 GHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI--- 396
Query: 375 MHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEM 434
+++GLC + AF +Y + RG+ I T+ LI FCK G+L + E+M
Sbjct: 397 ----LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
Query: 435 ISDGCVPDKGIWDVVMGGL 453
I G PD I+ V++ GL
Sbjct: 453 IKMGYPPDVVIYGVLVDGL 471
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 154/313 (49%), Gaps = 9/313 (2%)
Query: 46 FRHDHTTFGVMISRLVAANQFRSAEGLLERMKQEN-CVVTEDILLTICRGYG----RVHR 100
++ + + +MI++ A + E ++ +K E C +E+ + R YG R++R
Sbjct: 91 YQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINR 150
Query: 101 PLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNI 160
AI + M DF + KS+ ++++LV + K+G+ LNI
Sbjct: 151 ---AIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNI 207
Query: 161 LIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
LIK LC++ +++ALQ+ E P + +P+ T+ LI G C G EA +L ME++
Sbjct: 208 LIKGLCESG-NLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKE 266
Query: 221 GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQA 280
P +T+ LI G+ + + E I LLE MK G EPN TY ++ GL +L+A
Sbjct: 267 RIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEA 326
Query: 281 MELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISG 340
E++ M++ RP+ ++Y ++ GLC+ E +L +M G P ++ K++
Sbjct: 327 KEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQC 386
Query: 341 FCAASSYQDAANF 353
+ ++ AN
Sbjct: 387 VVSKNNDDSQANL 399
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 113/213 (53%), Gaps = 7/213 (3%)
Query: 172 IDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTS 231
I+ A++I MP+ GC P S ++ ++N L E ++F + G
Sbjct: 148 INRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNI 207
Query: 232 LIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKH 291
LI G+C+S NL A++LL+E + PNV T+S L+ G C G +A +LLE M +
Sbjct: 208 LIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKER 267
Query: 292 NRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAA 351
P+ +T+ LI+GL K+G+ E +++L+RM+++G +PN G Y +++ G +A
Sbjct: 268 IEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAK 327
Query: 352 NFIDEMVLGGISPSRATWSLHVRMHNTVVQGLC 384
+ +M+ G+ PS + + +V GLC
Sbjct: 328 EMMSQMISWGMRPSFLS-------YKKMVLGLC 353
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 102/256 (39%), Gaps = 39/256 (15%)
Query: 9 WPKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRS 68
WP + + + L+ + K ++ +F SA G D ++I L + +
Sbjct: 164 WPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKL---GVEIDACCLNILIKGLCESGNLEA 220
Query: 69 AEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVID 128
A LL+ Q+ + RG+ + +A ++ +ME
Sbjct: 221 ALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERME---------------- 264
Query: 129 ILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQ 188
K I P ++ NILI L + K ++ + + M +GC+
Sbjct: 265 -------------------KERIEPDTITFNILISGL-RKKGRVEEGIDLLERMKVKGCE 304
Query: 189 PDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRL 248
P+ TY ++ GL EAKE+ ++M G PS ++Y ++ G+C++ ++ E +
Sbjct: 305 PNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWV 364
Query: 249 LEEMKKNGIEPNVFTY 264
L +M +G P +
Sbjct: 365 LRQMVNHGFVPKTLMW 380
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 106/244 (43%), Gaps = 11/244 (4%)
Query: 218 EEKGFSPSVVTYTSLIHGMCQS---DNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKG 274
+ K + P+ Y +I+ Q+ D + E +R ++ K+ F Y+ +
Sbjct: 87 KRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFF-YNLMRIYGNLA 145
Query: 275 GHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLY 334
G +A+E+L M P+ ++ ++N L F E +I G++ +A
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 335 GKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQ 394
+I G C + + + A +DE P+ T+S +++G C+ AF+
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFS-------PLIRGFCNKGKFEEAFK 258
Query: 395 LYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLW 454
L M I + TF+ LI K+G + + +LE M GC P+ G + V+ GL
Sbjct: 259 LLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLL 318
Query: 455 DRKK 458
D+K+
Sbjct: 319 DKKR 322
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 152/317 (47%), Gaps = 3/317 (0%)
Query: 46 FRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDIL-LTICRGYGRVHRPLDA 104
FRH ++ +++ ++++ L++ M Q+ T L IC G A
Sbjct: 145 FRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLIC-SCGEAGLAKQA 203
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
+ F K + F + + SY +++ L+ K Y++M + G P V++ NIL+
Sbjct: 204 VVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWT 263
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
+ + +D ++F EM G PDSYTY L++ L + A N M+E G P
Sbjct: 264 NYRLGK-MDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDP 322
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
SV+ YT+LI G+ ++ NL L+EM K G P+V Y+ ++ G G +A E+
Sbjct: 323 SVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMF 382
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAA 344
M K PN+ TY ++I GLC G+F EA +L M +G PN +Y ++S A
Sbjct: 383 REMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKA 442
Query: 345 SSYQDAANFIDEMVLGG 361
+A I EMV G
Sbjct: 443 GKLSEARKVIREMVKKG 459
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 185/421 (43%), Gaps = 17/421 (4%)
Query: 22 IKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENC 81
I + I++ V+ S E +N H+ V+++ + + F S L E + +
Sbjct: 52 ISELRSIDREVISVRSRFLESAN-----HSASRVLVTLQLDESGFNSKSVLDELNVRVSG 106
Query: 82 VVTEDILLTICRG--YGRVHRPLD-AIRVF-HKMEDFQLKFTQKSYLTVIDILVEENHVK 137
++ ++L+ I R Y R A R F E + T SY ++ I E K
Sbjct: 107 LLVREVLVGILRNLSYDNKARCAKLAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYK 166
Query: 138 RAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTL 197
EM + G P + + N+LI + C A+ F + +P ++Y +
Sbjct: 167 AMWRLVDEMVQDGFPTTARTFNLLICS-CGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAI 225
Query: 198 INGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGI 257
+N L + + ++ +M E GFSP V+TY L+ + + RL +EM ++G
Sbjct: 226 LNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGF 285
Query: 258 EPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVE 317
P+ +TY+ L+ L KG L A+ L M P+++ Y TLI+GL + G
Sbjct: 286 SPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKY 345
Query: 318 ILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHN 377
LD M G +P+ Y +I+G+ + A EM + G P+ T+ N
Sbjct: 346 FLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTY-------N 398
Query: 378 TVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISD 437
++++GLC + A L M +RG + + L+ K G L++A +++ EM+
Sbjct: 399 SMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKK 458
Query: 438 G 438
G
Sbjct: 459 G 459
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 137/277 (49%), Gaps = 14/277 (5%)
Query: 30 KAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENC---VVTED 86
+AV+ F + F+H ++ +++ L+ Q++ E + ++M ++ V+T +
Sbjct: 202 QAVVQFMKSKTFNYRPFKH---SYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYN 258
Query: 87 ILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREM 146
ILL G++ R D R+F +M +Y ++ IL + N A+ M
Sbjct: 259 ILLWTNYRLGKMDR-FD--RLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHM 315
Query: 147 RKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGS 206
+++GI PSV+ LI L + +++ EM GC+PD Y +I G G
Sbjct: 316 KEVGIDPSVLHYTTLIDGLSR-AGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGE 374
Query: 207 VSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYST 266
+ +AKE+F EM KG P+V TY S+I G+C + EA LL+EM+ G PN YST
Sbjct: 375 LDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYST 434
Query: 267 LMDGLCKGGHSLQAMELLEMMVTK----HNRPNMVTY 299
L+ L K G +A +++ MV K H P M+ Y
Sbjct: 435 LVSYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMKY 471
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 169/382 (44%), Gaps = 58/382 (15%)
Query: 123 YLTVIDILVEENH----------VKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETI 172
Y VI L+ NH +++A REMR+MG P+ VS N LIK LC + +
Sbjct: 149 YSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLC-SVNNV 207
Query: 173 DSALQIFHEMPNRGCQPDSYTYGTLINGLC------------------------------ 202
D AL +F+ M G +P+ T +++ LC
Sbjct: 208 DKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVI 267
Query: 203 ---------RMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMK 253
+ G+V +A E++ EM +K V Y +I G+C S N+ A + +M
Sbjct: 268 CTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMV 327
Query: 254 KNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFS 313
K G+ P+VFTY+TL+ LCK G +A +L M P+ ++Y +I GLC G +
Sbjct: 328 KRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVN 387
Query: 314 EAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHV 373
A E L M L P L+ +I G+ A + ++ M+ G+ P +V
Sbjct: 388 RANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKP-------NV 440
Query: 374 RMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEE 433
+N ++ G A+ + MR+ I + T++ L+ C G L A ++ +E
Sbjct: 441 YTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDE 500
Query: 434 MISDGCVPDKGIW-DVVMGGLW 454
M+ GC PD + ++V G W
Sbjct: 501 MLRRGCQPDIITYTELVRGLCW 522
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 157/296 (53%), Gaps = 12/296 (4%)
Query: 161 LIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
+++ LC + +D+AL + +M G P T+ L+NGLC+ G + +A L EM E
Sbjct: 127 IMRDLCLQGK-LDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREM 185
Query: 221 GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLC-KGGHSLQ 279
G SP+ V+Y +LI G+C +N+ +A+ L M K GI PN T + ++ LC KG
Sbjct: 186 GPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNN 245
Query: 280 AMELLEMMV--TKHNRP-NMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGK 336
+LLE ++ ++ N P ++V L++ K G +A+E+ M + + ++ +Y
Sbjct: 246 NKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNV 305
Query: 337 IISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLY 396
II G C++ + A F+ +MV G++P V +NT++ LC A L+
Sbjct: 306 IIRGLCSSGNMVAAYGFMCDMVKRGVNPD-------VFTYNTLISALCKEGKFDEACDLH 358
Query: 397 LSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGG 452
+M+ G++ + ++ +I+ C GD+N+A L M+ +P+ +W+VV+ G
Sbjct: 359 GTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDG 414
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 146/295 (49%), Gaps = 8/295 (2%)
Query: 126 VIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR 185
++D + +V +A+ ++EM + +P V N++I+ LC + + +A +M R
Sbjct: 271 LMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMV-AAYGFMCDMVKR 329
Query: 186 GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEA 245
G PD +TY TLI+ LC+ G EA +L M+ G +P ++Y +I G+C ++ A
Sbjct: 330 GVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRA 389
Query: 246 IRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING 305
L M K+ + P V ++ ++DG + G + A+ +L +M++ +PN+ T LI+G
Sbjct: 390 NEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHG 449
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPS 365
K G+ +A + + MR + P+ Y ++ C + A DEM+ G P
Sbjct: 450 YVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPD 509
Query: 366 RATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCK 420
T++ +V+GLC +A L ++ GI+I+ F L K + +
Sbjct: 510 IITYT-------ELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTR 557
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 140/289 (48%), Gaps = 10/289 (3%)
Query: 172 IDSALQIFHEMPNRGCQPDSYTY-------GTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
+ S+L + CQ S+ Y +++ LC G + A L +M G P
Sbjct: 95 LKSSLDRLASLRESVCQTKSFDYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIP 154
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
++T+ L++G+C++ + +A L+ EM++ G PN +Y+TL+ GLC + +A+ L
Sbjct: 155 GLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLF 214
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAA 344
M RPN VT +++ LC++G + L L + NA L +I
Sbjct: 215 NTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPL-DIVICTILMD 273
Query: 345 SSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGI 404
S +++ N + + + + + V ++N +++GLCS+ + A+ M RG+
Sbjct: 274 SCFKNG-NVVQALEVWKEMSQKNVPADSV-VYNVIIRGLCSSGNMVAAYGFMCDMVKRGV 331
Query: 405 SIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
+ ++ T++ LI CK G ++A + M + G PD+ + V++ GL
Sbjct: 332 NPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGL 380
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 1/152 (0%)
Query: 94 GYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPP 153
GYGR A+ V + M + +K + +I V+ + A EMR I P
Sbjct: 414 GYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHP 473
Query: 154 SVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKEL 213
+ N+L+ A C + A Q++ EM RGCQPD TY L+ GLC G + +A+ L
Sbjct: 474 DTTTYNLLLGAACTLGH-LRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESL 532
Query: 214 FNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEA 245
+ ++ G + V + L + GEA
Sbjct: 533 LSRIQATGITIDHVPFLILAKKYTRLQRPGEA 564
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 144 bits (364), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 154/313 (49%), Gaps = 2/313 (0%)
Query: 43 SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPL 102
S FR H + I RL A +F + + +L+ K+ + + +ED ++ I YG
Sbjct: 80 SESFRQVHGLYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAE 139
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREM-RKMGIPPSVVSLNIL 161
A ++F +M + + T KS+ ++ V + A+ ++E+ K+GI P +V+ N +
Sbjct: 140 HAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTM 199
Query: 162 IKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKG 221
IKALC+ K ++D L IF E+ G +PD ++ TL+ R E +++ M+ K
Sbjct: 200 IKALCR-KGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKN 258
Query: 222 FSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAM 281
SP++ +Y S + G+ ++ +A+ L++ MK GI P+V TY+ L+ + + M
Sbjct: 259 LSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVM 318
Query: 282 ELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGF 341
+ M K P+ VTY LI LCK+G AVE+ + L +Y ++
Sbjct: 319 KCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERL 378
Query: 342 CAASSYQDAANFI 354
A +A +
Sbjct: 379 MGAGKIDEATQLV 391
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 137/286 (47%), Gaps = 43/286 (15%)
Query: 175 ALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK-GFSPSVVTYTSLI 233
A ++F EMP C+ ++ L++ + EA + F E+ EK G +P +VTY ++I
Sbjct: 141 AHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMI 200
Query: 234 HGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNR 293
+C+ ++ + + + EE++KNG EP++ +++TL++ + ++ + ++M +K+
Sbjct: 201 KALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLS 260
Query: 294 PNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANF 353
PN+ +Y + + GL + KF++A+ ++D M+ +G+ P+ Y +I+ + ++ ++
Sbjct: 261 PNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKC 320
Query: 354 IDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDC 413
+EM G++P T+ +
Sbjct: 321 YNEMKEKGLTPDTVTYCM------------------------------------------ 338
Query: 414 LIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
LI CK+GDL++A + EE I + ++ V+ L K+
Sbjct: 339 LIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKI 384
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 123/286 (43%), Gaps = 25/286 (8%)
Query: 169 KETIDSALQIFHEMPNRGCQPDSYT-----YGTLINGLCRMGSVSEAKEL------FNEM 217
K++ +S L E R C+ +S+ Y I L S E+ F+++
Sbjct: 60 KDSKNSKLTQKVEKFKRSCESESFRQVHGLYSAFIRRLREAKKFSTIDEVLQYQKKFDDI 119
Query: 218 EEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHS 277
+ + F V L++G S A +L +EM + E V +++ L+
Sbjct: 120 KSEDF----VIRIMLLYGY--SGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKL 173
Query: 278 LQAMELLEMMVTKHN-RPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGK 336
+AM+ + + K P++VTY T+I LC++G + + I + + G +P+ +
Sbjct: 174 DEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNT 233
Query: 337 IISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLY 396
++ F + + D M +SP ++R +N+ V+GL N A L
Sbjct: 234 LLEEFYRRELFVEGDRIWDLMKSKNLSP-------NIRSYNSRVRGLTRNKKFTDALNLI 286
Query: 397 LSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPD 442
M+T GIS ++ T++ LI + +L + + EM G PD
Sbjct: 287 DVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPD 332
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/464 (23%), Positives = 202/464 (43%), Gaps = 63/464 (13%)
Query: 12 QITSSLVEQLIKAEKDINKAVL-----------MFDSA----TAEYSNGFRHDHTTFGVM 56
++ VE ++ + +N AVL FD G R D F V
Sbjct: 253 ELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVF 312
Query: 57 ISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQL 116
I +L A + A +L ++K + ++ G+ +V +P +AI++ H F+L
Sbjct: 313 IDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHS---FRL 369
Query: 117 KFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSAL 176
+ Y + + + + RA ++E+ ++G+ P V +I C T D A
Sbjct: 370 RPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRT-DKAF 428
Query: 177 QIFHEMPNRGCQPDSYTYGTLINGLC-RMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHG 235
Q F + G P S T T++ G C R GS+S+A+ +F M+ +G VVTY +L+HG
Sbjct: 429 QYFGALLKSG-NPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHG 487
Query: 236 MCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPN 295
++ L + L++EM+ GI P+V TY+ L+ + G+ +A E++ ++ + P+
Sbjct: 488 YGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPS 547
Query: 296 MVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFID 355
+ + +I G K G F EA + M +KP+ ++ G+C A + A +
Sbjct: 548 TLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFN 607
Query: 356 EMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLI 415
+++ G+ P V ++NT++ G
Sbjct: 608 KLLDAGLKPD-------VVLYNTLIHG--------------------------------- 627
Query: 416 KCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
+C GD+ KA ++ M+ G +P++ ++ GL ++ V
Sbjct: 628 --YCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFV 669
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/455 (23%), Positives = 206/455 (45%), Gaps = 37/455 (8%)
Query: 25 EKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAAN-QFRSAEGLLERMKQEN--- 80
E+ ++ +++++ +E G H + MI LV+ N +R+ + LL +K+ +
Sbjct: 121 EETLDASIVLYFFRWSELWIGVEHSSRSISRMIHILVSGNMNYRAVDMLLCLVKKCSGEE 180
Query: 81 ---CVVTED----------------ILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQK 121
C+V +D IL+ C +V+ A+++ +K++ F + ++
Sbjct: 181 RSLCLVMKDLFETRIDRRVLETVFSILIDCCIRERKVNM---ALKLTYKVDQFGIFPSRG 237
Query: 122 SYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHE 181
++++ ++ + ++ A F M G + L++ I+ C + D ++
Sbjct: 238 VCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDG-YFDKGWELLMG 296
Query: 182 MPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDN 241
M + G +PD + I+ LC+ G + EA + +++ G S V+ +S+I G C+
Sbjct: 297 MKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGK 356
Query: 242 LGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGT 301
EAI+L+ + + PN+F YS+ + +C G L+A + + + P+ V Y T
Sbjct: 357 PEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTT 413
Query: 302 LINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGG 361
+I+G C G+ +A + + G P+ +I S DA + M G
Sbjct: 414 MIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEG 473
Query: 362 ISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKR 421
+ L V +N ++ G + F+L MR+ GIS ++ T++ LI R
Sbjct: 474 LK-------LDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVR 526
Query: 422 GDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDR 456
G +++A I+ E+I G VP + V+GG R
Sbjct: 527 GYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKR 561
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/464 (23%), Positives = 202/464 (43%), Gaps = 63/464 (13%)
Query: 12 QITSSLVEQLIKAEKDINKAVL-----------MFDSA----TAEYSNGFRHDHTTFGVM 56
++ VE ++ + +N AVL FD G R D F V
Sbjct: 253 ELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVF 312
Query: 57 ISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQL 116
I +L A + A +L ++K + ++ G+ +V +P +AI++ H F+L
Sbjct: 313 IDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHS---FRL 369
Query: 117 KFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSAL 176
+ Y + + + + RA ++E+ ++G+ P V +I C T D A
Sbjct: 370 RPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRT-DKAF 428
Query: 177 QIFHEMPNRGCQPDSYTYGTLINGLC-RMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHG 235
Q F + G P S T T++ G C R GS+S+A+ +F M+ +G VVTY +L+HG
Sbjct: 429 QYFGALLKSG-NPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHG 487
Query: 236 MCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPN 295
++ L + L++EM+ GI P+V TY+ L+ + G+ +A E++ ++ + P+
Sbjct: 488 YGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPS 547
Query: 296 MVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFID 355
+ + +I G K G F EA + M +KP+ ++ G+C A + A +
Sbjct: 548 TLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFN 607
Query: 356 EMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLI 415
+++ G+ P V ++NT++ G
Sbjct: 608 KLLDAGLKPD-------VVLYNTLIHG--------------------------------- 627
Query: 416 KCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
+C GD+ KA ++ M+ G +P++ ++ GL ++ V
Sbjct: 628 --YCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFV 669
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/455 (23%), Positives = 206/455 (45%), Gaps = 37/455 (8%)
Query: 25 EKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAAN-QFRSAEGLLERMKQEN--- 80
E+ ++ +++++ +E G H + MI LV+ N +R+ + LL +K+ +
Sbjct: 121 EETLDASIVLYFFRWSELWIGVEHSSRSISRMIHILVSGNMNYRAVDMLLCLVKKCSGEE 180
Query: 81 ---CVVTED----------------ILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQK 121
C+V +D IL+ C +V+ A+++ +K++ F + ++
Sbjct: 181 RSLCLVMKDLFETRIDRRVLETVFSILIDCCIRERKVNM---ALKLTYKVDQFGIFPSRG 237
Query: 122 SYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHE 181
++++ ++ + ++ A F M G + L++ I+ C + D ++
Sbjct: 238 VCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDG-YFDKGWELLMG 296
Query: 182 MPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDN 241
M + G +PD + I+ LC+ G + EA + +++ G S V+ +S+I G C+
Sbjct: 297 MKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGK 356
Query: 242 LGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGT 301
EAI+L+ + + PN+F YS+ + +C G L+A + + + P+ V Y T
Sbjct: 357 PEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTT 413
Query: 302 LINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGG 361
+I+G C G+ +A + + G P+ +I S DA + M G
Sbjct: 414 MIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEG 473
Query: 362 ISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKR 421
+ L V +N ++ G + F+L MR+ GIS ++ T++ LI R
Sbjct: 474 LK-------LDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVR 526
Query: 422 GDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDR 456
G +++A I+ E+I G VP + V+GG R
Sbjct: 527 GYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKR 561
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/470 (22%), Positives = 193/470 (41%), Gaps = 30/470 (6%)
Query: 11 KQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAE 70
+++T S+V +++K D A F A + G++HD + L FR+A+
Sbjct: 121 RRVTPSIVAEVLKLGNDAAVAAKFFHWAGKQ--KGYKHDFAAYNAFAYCLNRNGHFRAAD 178
Query: 71 GLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDIL 130
L E M + +E + R + R L V+ KM+ F K Y ++D L
Sbjct: 179 QLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDAL 238
Query: 131 VEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPD 190
V+ + A+A Y + ++ G+ + IL+K LCK I+ L+I M C+PD
Sbjct: 239 VKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGR-IEEMLEILQRMRENLCKPD 297
Query: 191 SYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLE 250
+ Y +I L G++ + +++EM P V+ Y +L+ G+C+ + L
Sbjct: 298 VFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFM 357
Query: 251 EMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEG 310
EMK I + Y L++G G A L E +V ++ Y +I GLC
Sbjct: 358 EMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVN 417
Query: 311 KFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDE-------------- 356
+ +A ++ + L+P+ I+ + + D +N ++
Sbjct: 418 QVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQ 477
Query: 357 -------------MVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRG 403
M L + V ++N +++ L D ++ L+ MR G
Sbjct: 478 FFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLG 537
Query: 404 ISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
+ ++ I CF ++GD+ A E++I CVP + + GL
Sbjct: 538 FEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGL 587
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 129/285 (45%), Gaps = 11/285 (3%)
Query: 44 NGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLD 103
+G+ D + +I L + NQ A L + +E + L I Y ++R D
Sbjct: 397 SGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSD 456
Query: 104 AIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIA---FYREMRKMGIPPSVVSLNI 160
V ++ +L + YLT L+ + K A+A FY + K SV NI
Sbjct: 457 FSNVLERIG--ELGYPVSDYLTQFFKLLCADEEKNAMALDVFY--ILKTKGHGSVSVYNI 512
Query: 161 LIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
L++AL K + I +L +F+EM G +PDS +Y I G V A ++ E
Sbjct: 513 LMEALYKMGD-IQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEM 571
Query: 221 GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIE--PNVFTYSTLMDGLCKGGHSL 278
PS+ Y SL G+CQ + + L+ E N +E P F Y+ + +CKG ++
Sbjct: 572 SCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGN-VESGPMEFKYALTVCHVCKGSNAE 630
Query: 279 QAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMR 323
+ M++++ M + N V Y +I+G+ K G A E+ ++
Sbjct: 631 KVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELK 675
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 136/312 (43%), Gaps = 7/312 (2%)
Query: 49 DHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVF 108
D + V+I VA + RSA L E + + I + +G V++ A ++F
Sbjct: 367 DREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLF 426
Query: 109 HKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVS--LNILIKALC 166
+ +L + + T+ I+V + R F + ++G VS L K LC
Sbjct: 427 QVAIEEEL---EPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLC 483
Query: 167 KNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSV 226
++E AL +F+ + +G S Y L+ L +MG + ++ LF EM + GF P
Sbjct: 484 ADEEKNAMALDVFYILKTKGHGSVS-VYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDS 542
Query: 227 VTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL-E 285
+Y+ I + ++ A E++ + P++ Y +L GLC+ G M L+ E
Sbjct: 543 SSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRE 602
Query: 286 MMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAAS 345
+ + P Y + +CK + ++++D M +G+ N +Y IISG
Sbjct: 603 CLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHG 662
Query: 346 SYQDAANFIDEM 357
+ + A E+
Sbjct: 663 TIKVAREVFTEL 674
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 102/217 (47%), Gaps = 11/217 (5%)
Query: 59 RLVAANQFRSAEGL----LERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDF 114
+L+ A++ ++A L + + K V +IL+ G + + L +F++M
Sbjct: 480 KLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLS---LFYEMRKL 536
Query: 115 QLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDS 174
+ SY I VE+ VK A +F+ ++ +M PS+ + L K LC+ E ID+
Sbjct: 537 GFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGE-IDA 595
Query: 175 ALQIFHE-MPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLI 233
+ + E + N P + Y + +C+ + + ++ +EM ++G + V Y ++I
Sbjct: 596 VMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAII 655
Query: 234 HGMCQSDNLGEAIRLLEEMKKNGI--EPNVFTYSTLM 268
GM + + A + E+KK + E ++ Y ++
Sbjct: 656 SGMSKHGTIKVAREVFTELKKRKVMTEADMVVYEEML 692
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 177/392 (45%), Gaps = 36/392 (9%)
Query: 87 ILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREM 146
+L + RG+ + A V +ME+ + L VID + ++ A+ F +M
Sbjct: 285 VLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKM 344
Query: 147 RKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGS 206
G+ + V ++++++ CK ++ AL+ F E + D Y + L ++G
Sbjct: 345 LGKGLKVNCVIVSLILQCYCKMDMCLE-ALEKFKEFRDMNIFLDRVCYNVAFDALSKLGR 403
Query: 207 VSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYST 266
V EA EL EM+++G P V+ YT+LI G C + +A+ L++EM NG+ P++ TY+
Sbjct: 404 VEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNV 463
Query: 267 LMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQ- 325
L+ GL + GH + +E+ E M + +PN VT +I GLC K EA + + +
Sbjct: 464 LVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKC 523
Query: 326 --------------GLKPNA-------------GLYGKIISGFCAASSYQDAANFIDEMV 358
GL A +Y K+ C + A + + +M
Sbjct: 524 PENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMS 583
Query: 359 LGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCF 418
+ P R+ M ++ C + A L+ +M RG+ ++ T+ +I +
Sbjct: 584 AYRVEPGRS-------MCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTY 636
Query: 419 CKRGDLNKAARILEEMISDGCVPDKGIWDVVM 450
C+ +L KA + E+M G PD + V++
Sbjct: 637 CRLNELQKAESLFEDMKQRGIKPDVVTYTVLL 668
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/453 (24%), Positives = 184/453 (40%), Gaps = 49/453 (10%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMK----QENCVVTEDILLTICRGYGRVHR 100
GF D +I R A G L++M + NCV+ IL C+ +
Sbjct: 313 GFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCK----MDM 368
Query: 101 PLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNI 160
L+A+ F + D + + Y D L + V+ A +EM+ GI P V++
Sbjct: 369 CLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTT 428
Query: 161 LIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
LI C + +D AL + EM G PD TY L++GL R G E E++ M+ +
Sbjct: 429 LIDGYCLQGKVVD-ALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAE 487
Query: 221 GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKN---------------GIEPNVF--- 262
G P+ VT + +I G+C + + EA +++ G+ +
Sbjct: 488 GPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAF 547
Query: 263 ----------TYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKF 312
Y L LC G+ +A ++L+ M P G +I CK
Sbjct: 548 VRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNV 607
Query: 313 SEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWS-- 370
EA + D M +GL P+ Y +I +C + Q A + ++M GI P T++
Sbjct: 608 REAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVL 667
Query: 371 ------LHVRMHNTV-VQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGD 423
L H T VQG V +A ++ GI +++ + LI CK +
Sbjct: 668 LDRYLKLDPEHHETCSVQG---EVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNN 724
Query: 424 LNKAARILEEMISDGCVPDKGIWDVVMGGLWDR 456
L +AA + + MI G PD + ++ + +
Sbjct: 725 LEQAAELFDRMIDSGLEPDMVAYTTLISSYFRK 757
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 150/328 (45%), Gaps = 15/328 (4%)
Query: 133 ENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSY 192
E +K A + EM ++G V + +I CKN + AL +M +G + +
Sbjct: 296 EMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNM-NLPEALGFLDKMLGKGLKVNCV 354
Query: 193 TYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEM 252
++ C+M EA E F E + V Y + + + EA LL+EM
Sbjct: 355 IVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEM 414
Query: 253 KKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKF 312
K GI P+V Y+TL+DG C G + A++L++ M+ P+++TY L++GL + G
Sbjct: 415 KDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHE 474
Query: 313 SEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLH 372
E +EI +RM+ +G KPNA II G C A ++A +F + ++A++
Sbjct: 475 EEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLE-QKCPENKASF--- 530
Query: 373 VRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILE 432
V+G C S +A++ ++ + + + L C G L KA +L+
Sbjct: 531 -------VKGYCEAGLSKKAYKAFVRLE---YPLRKSVYIKLFFSLCIEGYLEKAHDVLK 580
Query: 433 EMISDGCVPDKGIWDVVMGGLWDRKKVR 460
+M + P + + ++G VR
Sbjct: 581 KMSAYRVEPGRSMCGKMIGAFCKLNNVR 608
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 142/349 (40%), Gaps = 61/349 (17%)
Query: 118 FTQKSYLTVIDI---------LVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKN 168
F K V+DI + E + + +++++++G+ + + I++KALC+
Sbjct: 170 FQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRK 229
Query: 169 KETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSE------------------- 209
++A+ + + Y T INGLC G +
Sbjct: 230 GNLEEAAMLLIE-------NESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDL 282
Query: 210 -------------------AKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLE 250
A+ + EMEE GF V ++I C++ NL EA+ L+
Sbjct: 283 RAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLD 342
Query: 251 EMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEG 310
+M G++ N S ++ CK L+A+E + + + V Y + L K G
Sbjct: 343 KMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLG 402
Query: 311 KFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWS 370
+ EA E+L M+ +G+ P+ Y +I G+C DA + IDEM+ G+SP T+
Sbjct: 403 RVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITY- 461
Query: 371 LHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFC 419
N +V GL N ++Y M+ G T +I+ C
Sbjct: 462 ------NVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLC 504
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 145/319 (45%), Gaps = 21/319 (6%)
Query: 43 SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPL 102
+ G + + T V+I L A + + AE ++Q+ C + + +GY
Sbjct: 486 AEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQK-CPENKA---SFVKGYCEAGLSK 541
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
A + F ++E + L+ + Y+ + L E ++++A ++M + P +I
Sbjct: 542 KAYKAFVRLE-YPLR--KSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMI 598
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF 222
A CK + A +F M RG PD +TY +I+ CR+ + +A+ LF +M+++G
Sbjct: 599 GAFCK-LNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGI 657
Query: 223 SPSVVTYTSLI----------HGMCQ-SDNLGE--AIRLLEEMKKNGIEPNVFTYSTLMD 269
P VVTYT L+ H C +G+ A +L E GI +V Y+ L+D
Sbjct: 658 KPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLID 717
Query: 270 GLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKP 329
CK + QA EL + M+ P+MV Y TLI+ ++G AV ++ + + P
Sbjct: 718 RQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIP 777
Query: 330 NAGLYGKIISGFCAASSYQ 348
+ + S A +Q
Sbjct: 778 SESFEAAVKSAALKAKRFQ 796
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 132/312 (42%), Gaps = 37/312 (11%)
Query: 173 DSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSL 232
D A + + C D L+N + G + LF ++++ G + TY +
Sbjct: 163 DEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIV 222
Query: 233 IHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMEL-LEMMVTKH 291
+ +C+ NL EA LL E +VF Y T ++GLC G + +A+ L LE++ K+
Sbjct: 223 VKALCRKGNLEEAAMLLIE------NESVFGYKTFINGLCVTGETEKAVALILELIDRKY 276
Query: 292 NRPN--MVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQD 349
+ G ++ G C E K A ++ M G + +I +C + +
Sbjct: 277 LAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPE 336
Query: 350 AANFIDEMVLGGISPSRATWSL-------------------HVRMHNTVVQGLCSNVD-- 388
A F+D+M+ G+ + SL R N + +C NV
Sbjct: 337 ALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFD 396
Query: 389 -------SPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVP 441
AF+L M+ RGI ++ + LI +C +G + A +++EMI +G P
Sbjct: 397 ALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSP 456
Query: 442 DKGIWDVVMGGL 453
D ++V++ GL
Sbjct: 457 DLITYNVLVSGL 468
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 152/371 (40%), Gaps = 56/371 (15%)
Query: 54 GVMISRLVAANQFRSAEGLLERMKQENCVV---TEDILLTICRGYGRVHRPLDAIRVFHK 110
G ++ V+ F A +L + K+ +CVV + L+ +G++ + +F +
Sbjct: 150 GALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGM---LMTLFKQ 206
Query: 111 MEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKE 170
++ L + +Y V+ L + +++ A E SV I LC E
Sbjct: 207 LKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIE------NESVFGYKTFINGLCVTGE 260
Query: 171 TIDSALQIFHEMPNRGCQPDSY--TYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVT 228
T + I + + D G ++ G C + A+ + EMEE GF V
Sbjct: 261 TEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYA 320
Query: 229 YTSLIHGMCQSDNLGEAIRLLEEMKKNGI------------------------------- 257
++I C++ NL EA+ L++M G+
Sbjct: 321 CLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFR 380
Query: 258 EPNVF----TYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFS 313
+ N+F Y+ D L K G +A ELL+ M + P+++ Y TLI+G C +GK
Sbjct: 381 DMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVV 440
Query: 314 EAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHV 373
+A++++D M G+ P+ Y ++SG ++ + M G P+ T S+
Sbjct: 441 DALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSV-- 498
Query: 374 RMHNTVVQGLC 384
+++GLC
Sbjct: 499 -----IIEGLC 504
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 164/356 (46%), Gaps = 5/356 (1%)
Query: 12 QITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEG 71
Q T LV ++++ K AVL F S + NG++H+ + + I F+
Sbjct: 641 QFTPELVVEVLRHAKIQGNAVLRFFSWVGK-RNGYKHNSEAYNMSIKVAGCGKDFKQMRS 699
Query: 72 LLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILV 131
L M+++ C++T+D + YGR AIR F +M+D L + ++ +I +L
Sbjct: 700 LFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLC 759
Query: 132 EEN--HVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQP 189
E+ +V+ A +REM + G P + + LC+ T D A + G P
Sbjct: 760 EKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKD-AKSCLDSLGKIGF-P 817
Query: 190 DSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLL 249
+ Y I LCR+G + EA E + TY S++HG+ Q +L +A+ +
Sbjct: 818 VTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKV 877
Query: 250 EEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKE 309
MK+ G +P V Y++L+ K + +E + M + P++VTY +I G
Sbjct: 878 NSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSL 937
Query: 310 GKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPS 365
GK EA M +G P+ Y K I+ C A +DA + EM+ GI+PS
Sbjct: 938 GKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPS 993
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 173/394 (43%), Gaps = 19/394 (4%)
Query: 44 NGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENC---VVTEDILLTICRGYGRVHR 100
+GF H + M+S A + L+ M++ C + T IL+++ YG+ +
Sbjct: 183 DGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISV---YGKAKK 239
Query: 101 PLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNI 160
+ VF KM + +Y +I L A+ FY+EM + GI + + +
Sbjct: 240 IGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKM 299
Query: 161 LIKALCKNKETIDSALQIFHEMPNRGCQPDSY-TYGTLINGLCRMGSVSEAKELFNEMEE 219
L+ + K+ E +D I +M R C+ + +G L+ C G + EA EL E++
Sbjct: 300 LLDCIAKS-EKVDVVQSIADDMV-RICEISEHDAFGYLLKSFCVSGKIKEALELIRELKN 357
Query: 220 KGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIE-PNVFTYSTLMDGLCKGGHSL 278
K + L+ G+C+++ + +A+ +++ MK+ ++ NV Y ++ G +
Sbjct: 358 KEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNV--YGIIISGYLRQNDVS 415
Query: 279 QAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKII 338
+A+E E++ P + TY ++ L K +F + + + M G++P++ ++
Sbjct: 416 KALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVV 475
Query: 339 SGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLS 398
+G + +A M GI P TW + ++ V+ LC + +++
Sbjct: 476 AGHLGQNRVAEAWKVFSSMEEKGIKP---TW----KSYSIFVKELCRSSRYDEIIKIFNQ 528
Query: 399 MRTRGISIEIDTFDCLIKCFCKRGDLNKAARILE 432
M I I D F +I K G+ K I E
Sbjct: 529 MHASKIVIRDDIFSWVISSMEKNGEKEKIHLIKE 562
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 190/444 (42%), Gaps = 44/444 (9%)
Query: 49 DHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVF 108
+H FG ++ + + + A L+ +K + + + +G R +R +DA+ +
Sbjct: 328 EHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIV 387
Query: 109 HKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKN 168
M+ +L Y +I + +N V +A+ + ++K G PP V + +++ L K
Sbjct: 388 DIMKRRKLD-DSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKL 446
Query: 169 KETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVT 228
K+ + +F+EM G +PDS ++ G V+EA ++F+ MEEKG P+ +
Sbjct: 447 KQ-FEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKS 505
Query: 229 YTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMV 288
Y+ + +C+S E I++ +M + I +S ++ + K G E + ++
Sbjct: 506 YSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGEK----EKIHLIK 561
Query: 289 TKHNRPNMVTYGTLINGLCKEGKFSEAVEILDR------MRLQGLKPNAGLYGKI-ISGF 341
R N +Y +NG K +FS+ E++D ++ L P K+ +
Sbjct: 562 EIQKRSN--SYCDELNGSGK-AEFSQEEELVDDYNCPQLVQQSALPPALSAVDKMDVQEI 618
Query: 342 CAA-SSYQD-----------AANFIDEMVLGGISPSRATWSLHVRM-----------HNT 378
C SS +D F E+V+ + ++ + +R HN+
Sbjct: 619 CRVLSSSRDWERTQEALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNS 678
Query: 379 VVQGLCSNV-----DSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEE 433
+ V D + L+ MR +G I DT+ +I + + G N A R +E
Sbjct: 679 EAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKE 738
Query: 434 MISDGCVPDKGIWDVVMGGLWDRK 457
M G +P + ++ L ++K
Sbjct: 739 MKDMGLIPSSSTFKCLITVLCEKK 762
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 146/366 (39%), Gaps = 44/366 (12%)
Query: 123 YLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEM 182
Y T++ I E ++ EM K G + + ILI K K+ I L +F +M
Sbjct: 192 YNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKK-IGKGLLVFEKM 250
Query: 183 PNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYT------------ 230
G + D+ Y +I LC G A E + EM EKG + + TY
Sbjct: 251 RKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKV 310
Query: 231 -----------------------SLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTL 267
L+ C S + EA+ L+ E+K + + + L
Sbjct: 311 DVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEIL 370
Query: 268 MDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGL 327
+ GLC+ + A+E++++M + + YG +I+G ++ S+A+E + ++ G
Sbjct: 371 VKGLCRANRMVDALEIVDIM-KRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGR 429
Query: 328 KPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNV 387
P Y +I+ ++ N +EM+ GI P + VV G
Sbjct: 430 PPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAIT-------AVVAGHLGQN 482
Query: 388 DSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWD 447
A++++ SM +GI ++ +K C+ ++ +I +M + V I+
Sbjct: 483 RVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFS 542
Query: 448 VVMGGL 453
V+ +
Sbjct: 543 WVISSM 548
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 136/321 (42%), Gaps = 19/321 (5%)
Query: 26 KDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVV-- 83
K I K +L+F+ +GF D T + +MI L A + A + M ++
Sbjct: 238 KKIGKGLLVFEKMR---KSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGL 294
Query: 84 -TEDILLTICRGYGRVHR----PLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKR 138
T +LL +V D +R+ E + KS+ +K
Sbjct: 295 RTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCV-------SGKIKE 347
Query: 139 AIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLI 198
A+ RE++ + IL+K LC+ +D AL+I M R DS YG +I
Sbjct: 348 ALELIRELKNKEMCLDAKYFEILVKGLCRANRMVD-ALEIVDIMKRRKLD-DSNVYGIII 405
Query: 199 NGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIE 258
+G R VS+A E F +++ G P V TYT ++ + + + L EM +NGIE
Sbjct: 406 SGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIE 465
Query: 259 PNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEI 318
P+ + ++ G +A ++ M K +P +Y + LC+ ++ E ++I
Sbjct: 466 PDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKI 525
Query: 319 LDRMRLQGLKPNAGLYGKIIS 339
++M + ++ +IS
Sbjct: 526 FNQMHASKIVIRDDIFSWVIS 546
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 2/192 (1%)
Query: 93 RGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIP 152
R R+ + +A+ E + Q +Y +++ L++ +++A+ M+++G
Sbjct: 827 RALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTK 886
Query: 153 PSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKE 212
P V LI K K+ ++ L+ +M C+P TY +I G +G V EA
Sbjct: 887 PGVHVYTSLIVYFFKEKQ-LEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWN 945
Query: 213 LFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLC 272
F MEE+G SP TY+ I+ +CQ+ +A++LL EM GI P+ + T+ GL
Sbjct: 946 AFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLN 1005
Query: 273 K-GGHSLQAMEL 283
+ G H L + L
Sbjct: 1006 REGKHDLARIAL 1017
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 134/321 (41%), Gaps = 19/321 (5%)
Query: 134 NHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYT 193
N VK+ F ++GI +++S I +N + +D ++ EM GC D T
Sbjct: 177 NWVKQKDGF---SHRVGIYNTMLS----IAGEARNLDMVD---ELVSEMEKNGCDKDIRT 226
Query: 194 YGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMK 253
+ LI+ + + + +F +M + GF Y +I +C + A+ +EM
Sbjct: 227 WTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMM 286
Query: 254 KNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFS 313
+ GI + TY L+D + K + + MV +G L+ C GK
Sbjct: 287 EKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIK 346
Query: 314 EAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHV 373
EA+E++ ++ + + +A + ++ G C A+ DA +D M + S
Sbjct: 347 EALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDS-------- 398
Query: 374 RMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEE 433
++ ++ G D +A + + ++ G + T+ +++ K K + E
Sbjct: 399 NVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNE 458
Query: 434 MISDGCVPDK-GIWDVVMGGL 453
MI +G PD I VV G L
Sbjct: 459 MIENGIEPDSVAITAVVAGHL 479
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 108/284 (38%), Gaps = 45/284 (15%)
Query: 178 IFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMC 237
+F+EM +GC T+ +I R G + A F EM++ G PS T+ LI +C
Sbjct: 700 LFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLC 759
Query: 238 QSD--NLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPN 295
+ N+ EA R EM ++G P+ + LC+ G++ A L+ + K P
Sbjct: 760 EKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSL-GKIGFPV 818
Query: 296 MVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFID 355
V Y I LC+ GK EA+ L +S++ + +D
Sbjct: 819 TVAYSIYIRALCRIGKLEEALSEL-------------------------ASFEGERSLLD 853
Query: 356 EMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLI 415
+ G I V GL D +A SM+ G + + LI
Sbjct: 854 QYTYGSI-----------------VHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLI 896
Query: 416 KCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
F K L K ++M + C P + ++ G KV
Sbjct: 897 VYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKV 940
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 189/395 (47%), Gaps = 16/395 (4%)
Query: 67 RSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQ-LKFTQKSYLT 125
R+ E +L+ MK + ++ D+++ + + +P A R F + Q ++Y +
Sbjct: 146 RNMEAVLDEMKLD---LSHDLIVEVLERFRHARKP--AFRFFCWAAERQGFAHDSRTYNS 200
Query: 126 VIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR 185
++ IL + + ++ EM G+ ++ + I +KA KE A+ IF M
Sbjct: 201 MMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKER-KKAVGIFELMKKY 258
Query: 186 GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEA 245
+ T L++ L R EA+ LF++++E+ F+P+++TYT L++G C+ NL EA
Sbjct: 259 KFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEA 317
Query: 246 IRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING 305
R+ +M G++P++ ++ +++GL + A++L +M +K PN+ +Y +I
Sbjct: 318 ARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRD 377
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPS 365
CK+ A+E D M GL+P+A +Y +I+GF + EM G P
Sbjct: 378 FCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPD 437
Query: 366 RATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLN 425
T+ N +++ + + A ++Y M I I TF+ ++K + +
Sbjct: 438 GKTY-------NALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYE 490
Query: 426 KAARILEEMISDGCVPDKGIWDVVMGGLWDRKKVR 460
+ EEMI G PD + V++ GL K R
Sbjct: 491 MGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSR 525
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 176/362 (48%), Gaps = 4/362 (1%)
Query: 13 ITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGL 72
++ L+ ++++ + K F AE GF HD T+ M+S L QF + +
Sbjct: 159 LSHDLIVEVLERFRHARKPAFRFFCWAAE-RQGFAHDSRTYNSMMSILAKTRQFETMVSV 217
Query: 73 LERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVE 132
LE M + + E + + + + A+ +F M+ ++ K ++ ++D L
Sbjct: 218 LEEMGTKGLLTMETFTIAM-KAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGR 276
Query: 133 ENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSY 192
K A + ++++ P++++ +L+ C+ + I++A +I+++M ++G +PD
Sbjct: 277 AKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAA-RIWNDMIDQGLKPDIV 334
Query: 193 TYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEM 252
+ ++ GL R S+A +LF+ M+ KG P+V +YT +I C+ ++ AI ++M
Sbjct: 335 AHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 394
Query: 253 KKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKF 312
+G++P+ Y+ L+ G ELL+ M K + P+ TY LI + +
Sbjct: 395 VDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMP 454
Query: 313 SEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLH 372
A I ++M ++P+ + I+ + A +Y+ +EM+ GI P ++++
Sbjct: 455 EHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVL 514
Query: 373 VR 374
+R
Sbjct: 515 IR 516
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 159/330 (48%), Gaps = 9/330 (2%)
Query: 14 TSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLL 73
T ++ + A K+ KAV +F+ +Y F+ T ++ L A + A+ L
Sbjct: 231 TFTIAMKAFAAAKERKKAVGIFE-LMKKYK--FKIGVETINCLLDSLGRAKLGKEAQVLF 287
Query: 74 ERMKQENC--VVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILV 131
+++K+ ++T +LL G+ RV ++A R+++ M D LK ++ +++ L+
Sbjct: 288 DKLKERFTPNMMTYTVLLN---GWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLL 344
Query: 132 EENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDS 191
AI + M+ G P+V S I+I+ CK + ++++A++ F +M + G QPD+
Sbjct: 345 RSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCK-QSSMETAIEYFDDMVDSGLQPDA 403
Query: 192 YTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEE 251
Y LI G + EL EM+EKG P TY +LI M A R+ +
Sbjct: 404 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNK 463
Query: 252 MKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGK 311
M +N IEP++ T++ +M + + E M+ K P+ +Y LI GL EGK
Sbjct: 464 MIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGK 523
Query: 312 FSEAVEILDRMRLQGLKPNAGLYGKIISGF 341
EA L+ M +G+K Y K + F
Sbjct: 524 SREACRYLEEMLDKGMKTPLIDYNKFAADF 553
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 114/255 (44%), Gaps = 4/255 (1%)
Query: 82 VVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIA 141
+V +++L G R + DAI++FH M+ +SY +I +++ ++ AI
Sbjct: 333 IVAHNVML---EGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIE 389
Query: 142 FYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGL 201
++ +M G+ P LI K+ +D+ ++ EM +G PD TY LI +
Sbjct: 390 YFDDMVDSGLQPDAAVYTCLITGFGTQKK-LDTVYELLKEMQEKGHPPDGKTYNALIKLM 448
Query: 202 CRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNV 261
A ++N+M + PS+ T+ ++ + N + EEM K GI P+
Sbjct: 449 ANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDD 508
Query: 262 FTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDR 321
+Y+ L+ GL G S +A LE M+ K + ++ Y + G+ E+ R
Sbjct: 509 NSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQR 568
Query: 322 MRLQGLKPNAGLYGK 336
+ G A ++ +
Sbjct: 569 AKFSGKFAAAEIFAR 583
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/482 (23%), Positives = 208/482 (43%), Gaps = 52/482 (10%)
Query: 16 SLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLER 75
S + L+K+ I+ AV +FD F D+ F I LV ++F AE +
Sbjct: 14 SRIANLVKSGM-IDNAVQVFDEMRHSSYRVFSFDYNRF---IGVLVRESRFELAEAIYWD 69
Query: 76 MKQENCVVTEDILLTICRGYGRVHR--PLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEE 133
MK + G +V + +DA+ ME ++ +D+L E
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDAL--LSDMETLGFIPDIWAFNVYLDLLCRE 127
Query: 134 NHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPD--- 190
N V A+ + M + G P VVS ILI L + + D A++I++ M G PD
Sbjct: 128 NKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTD-AVEIWNAMIRSGVSPDNKA 186
Query: 191 ---------------------------------SYTYGTLINGLCRMGSVSEAKELFNEM 217
+ Y LI+G C+ G + +A+ L + M
Sbjct: 187 CAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYM 246
Query: 218 EEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHS 277
+ G P +VTY L++ ++ L A ++ EM ++GI+ + ++Y+ L+ C+ H
Sbjct: 247 SKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHP 306
Query: 278 LQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKI 337
+ + + ++V+Y TLI C+ +A + + MR +G+ N Y +
Sbjct: 307 DKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSL 366
Query: 338 ISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYL 397
I F + A +D+M G+SP R + T++ LC + + +A+ ++
Sbjct: 367 IKAFLREGNSSVAKKLLDQMTELGLSPDRI-------FYTTILDHLCKSGNVDKAYGVFN 419
Query: 398 SMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRK 457
M I+ + +++ LI C+ G + +A ++ E+M C PD+ + ++GGL K
Sbjct: 420 DMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGK 479
Query: 458 KV 459
K+
Sbjct: 480 KL 481
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 133/265 (50%), Gaps = 10/265 (3%)
Query: 122 SYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHE 181
+Y +++ + N +KRA EM + GI S N L+K C+ + E
Sbjct: 257 TYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKE 316
Query: 182 MPNRG-CQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSD 240
M RG C D +Y TLI CR + +A LF EM +KG +VVTYTSLI +
Sbjct: 317 MEPRGFC--DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREG 374
Query: 241 NLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYG 300
N A +LL++M + G+ P+ Y+T++D LCK G+ +A + M+ P+ ++Y
Sbjct: 375 NSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYN 434
Query: 301 TLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLG 360
+LI+GLC+ G+ +EA+++ + M+ + P+ + II G A D+M+
Sbjct: 435 SLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDK 494
Query: 361 GISPSRATWSLHVRMHNTVVQGLCS 385
G + R + +T+++ CS
Sbjct: 495 GFTLDR-------DVSDTLIKASCS 512
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 147/300 (49%), Gaps = 9/300 (3%)
Query: 51 TTFGVMISRLVAANQFRSAEGLLERMKQENC---VVTEDILLTICRGYGRVHRPLDAIRV 107
+ +IS A + AE L M + C +VT ++LL + R A V
Sbjct: 221 VVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKR---AEGV 277
Query: 108 FHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAF-YREMRKMGIPPSVVSLNILIKALC 166
+M ++ SY ++ +H + F +EM G VVS + LI+ C
Sbjct: 278 MAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETFC 336
Query: 167 KNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSV 226
+ T A ++F EM +G + TY +LI R G+ S AK+L ++M E G SP
Sbjct: 337 RASNT-RKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDR 395
Query: 227 VTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEM 286
+ YT+++ +C+S N+ +A + +M ++ I P+ +Y++L+ GLC+ G +A++L E
Sbjct: 396 IFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFED 455
Query: 287 MVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASS 346
M K P+ +T+ +I GL + K S A ++ D+M +G + + +I C+ S+
Sbjct: 456 MKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASCSMSA 515
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 114/269 (42%), Gaps = 8/269 (2%)
Query: 193 TYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEM 252
Y + I L + G + A ++F+EM + Y I + + A + +M
Sbjct: 11 AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDM 70
Query: 253 KKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKF 312
K G FTYS + GLCK LL M T P++ + ++ LC+E K
Sbjct: 71 KPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKV 130
Query: 313 SEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLH 372
AV+ M +G +P+ Y +I+G A DA + M+ G+SP +
Sbjct: 131 GFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACA-- 188
Query: 373 VRMHNTVVQGLCSNVDSPRAFQLYL-SMRTRGISIEIDTFDCLIKCFCKRGDLNKAARIL 431
+V GLC A+++ +++ + + ++ LI FCK G + KA +
Sbjct: 189 -----ALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALK 243
Query: 432 EEMISDGCVPDKGIWDVVMGGLWDRKKVR 460
M GC PD ++V++ +D ++
Sbjct: 244 SYMSKIGCEPDLVTYNVLLNYYYDNNMLK 272
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 175/364 (48%), Gaps = 17/364 (4%)
Query: 12 QITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEG 71
+I + Q++K D A+ F + GF+HD T+ M+ L A QF +
Sbjct: 328 RIDAYQANQVLKQMNDYGNALGFF--YWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINK 385
Query: 72 LLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILV 131
LL+ M ++ C + YGR + +A+ VF++M++ K + +Y T+IDI
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 132 EENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDS 191
+ + A+ Y+ M+ G+ P + +++I L K + +A ++F EM ++GC P+
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH-LPAAHKLFCEMVDQGCTPNL 504
Query: 192 YTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEE 251
TY +++ + + A +L+ +M+ GF P VTY+ ++ + L EA + E
Sbjct: 505 VTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTE 564
Query: 252 MKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGK 311
M++ P+ Y L+D K G+ +A + + M+ RPN+ T +L++ + K
Sbjct: 565 MQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNK 624
Query: 312 FSEAVEILDRMRLQGLKPNAGLYGKIIS-----------GFCA---ASSYQDAANFIDEM 357
+EA E+L M GL+P+ Y ++S GFC AS+ A F+ +M
Sbjct: 625 IAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKM 684
Query: 358 VLGG 361
G
Sbjct: 685 PAAG 688
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 150/314 (47%), Gaps = 9/314 (2%)
Query: 129 ILVEENHVKRAIAFYREM-RKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGC 187
+L + N A+ F+ + R+ G + ++ L + K+ + ++ EM GC
Sbjct: 337 VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQ-FGAINKLLDEMVRDGC 395
Query: 188 QPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIR 247
QP++ TY LI+ R ++EA +FN+M+E G P VTY +LI ++ L A+
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 248 LLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLC 307
+ + M+ G+ P+ FTYS +++ L K GH A +L MV + PN+VTY +++
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 308 KEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRA 367
K + A+++ M+ G +P+ Y ++ ++A EM P
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 368 TWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKA 427
+ L V + G NV+ +A+Q Y +M G+ + T + L+ F + + +A
Sbjct: 576 VYGLLVDL-----WGKAGNVE--KAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEA 628
Query: 428 ARILEEMISDGCVP 441
+L+ M++ G P
Sbjct: 629 YELLQNMLALGLRP 642
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 134/295 (45%), Gaps = 19/295 (6%)
Query: 170 ETIDSALQIFHEMP-------NRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEME-EKG 221
E + S L+ F P N G + D+Y ++ +M A F ++ + G
Sbjct: 303 ENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLK---QMNDYGNALGFFYWLKRQPG 359
Query: 222 FSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAM 281
F TYT+++ + ++ G +LL+EM ++G +PN TY+ L+ + + +AM
Sbjct: 360 FKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAM 419
Query: 282 ELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGF 341
+ M +P+ VTY TLI+ K G A+++ RM+ GL P+ Y II+
Sbjct: 420 NVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCL 479
Query: 342 CAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRT 401
A A EMV G +P+ T+++ + +H + A +LY M+
Sbjct: 480 GKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKA-------RNYQNALKLYRDMQN 532
Query: 402 RGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDR 456
G + T+ +++ G L +A + EM +PD+ ++ +++ LW +
Sbjct: 533 AGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLV-DLWGK 586
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 152/365 (41%), Gaps = 14/365 (3%)
Query: 28 INKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDI 87
+N+A+ +F+ G + D T+ +I A A + +RM+
Sbjct: 415 LNEAMNVFNQMQEA---GCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFT 471
Query: 88 LLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMR 147
I G+ A ++F +M D +Y ++D+ + + + A+ YR+M+
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQ 531
Query: 148 KMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSV 207
G P V+ +I+++ L + ++ A +F EM + PD YG L++ + G+V
Sbjct: 532 NAGFEPDKVTYSIVMEVL-GHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNV 590
Query: 208 SEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTL 267
+A + + M G P+V T SL+ + + + EA LL+ M G+ P++ TY TL
Sbjct: 591 EKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY-TL 649
Query: 268 MDGLCKGGHSLQAMELL-EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQG 326
+ C G S M ++M + + +M G E + A LD M +
Sbjct: 650 LLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSED 709
Query: 327 LKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISP------SRATW--SLHVRMHNT 378
+ GL ++ + ++A + + + P S + W +LHV T
Sbjct: 710 RESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGT 769
Query: 379 VVQGL 383
V L
Sbjct: 770 AVTAL 774
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 175/364 (48%), Gaps = 17/364 (4%)
Query: 12 QITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEG 71
+I + Q++K D A+ F + GF+HD T+ M+ L A QF +
Sbjct: 328 RIDAYQANQVLKQMNDYGNALGFF--YWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINK 385
Query: 72 LLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILV 131
LL+ M ++ C + YGR + +A+ VF++M++ K + +Y T+IDI
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 132 EENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDS 191
+ + A+ Y+ M+ G+ P + +++I L K + +A ++F EM ++GC P+
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH-LPAAHKLFCEMVDQGCTPNL 504
Query: 192 YTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEE 251
TY +++ + + A +L+ +M+ GF P VTY+ ++ + L EA + E
Sbjct: 505 VTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTE 564
Query: 252 MKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGK 311
M++ P+ Y L+D K G+ +A + + M+ RPN+ T +L++ + K
Sbjct: 565 MQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNK 624
Query: 312 FSEAVEILDRMRLQGLKPNAGLYGKIIS-----------GFCA---ASSYQDAANFIDEM 357
+EA E+L M GL+P+ Y ++S GFC AS+ A F+ +M
Sbjct: 625 IAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKM 684
Query: 358 VLGG 361
G
Sbjct: 685 PAAG 688
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 150/314 (47%), Gaps = 9/314 (2%)
Query: 129 ILVEENHVKRAIAFYREM-RKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGC 187
+L + N A+ F+ + R+ G + ++ L + K+ + ++ EM GC
Sbjct: 337 VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQ-FGAINKLLDEMVRDGC 395
Query: 188 QPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIR 247
QP++ TY LI+ R ++EA +FN+M+E G P VTY +LI ++ L A+
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 248 LLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLC 307
+ + M+ G+ P+ FTYS +++ L K GH A +L MV + PN+VTY +++
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 308 KEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRA 367
K + A+++ M+ G +P+ Y ++ ++A EM P
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 368 TWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKA 427
+ L V + G NV+ +A+Q Y +M G+ + T + L+ F + + +A
Sbjct: 576 VYGLLVDL-----WGKAGNVE--KAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEA 628
Query: 428 ARILEEMISDGCVP 441
+L+ M++ G P
Sbjct: 629 YELLQNMLALGLRP 642
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 134/295 (45%), Gaps = 19/295 (6%)
Query: 170 ETIDSALQIFHEMP-------NRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEME-EKG 221
E + S L+ F P N G + D+Y ++ +M A F ++ + G
Sbjct: 303 ENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLK---QMNDYGNALGFFYWLKRQPG 359
Query: 222 FSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAM 281
F TYT+++ + ++ G +LL+EM ++G +PN TY+ L+ + + +AM
Sbjct: 360 FKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAM 419
Query: 282 ELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGF 341
+ M +P+ VTY TLI+ K G A+++ RM+ GL P+ Y II+
Sbjct: 420 NVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCL 479
Query: 342 CAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRT 401
A A EMV G +P+ T+++ + +H + A +LY M+
Sbjct: 480 GKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLH-------AKARNYQNALKLYRDMQN 532
Query: 402 RGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDR 456
G + T+ +++ G L +A + EM +PD+ ++ +++ LW +
Sbjct: 533 AGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLV-DLWGK 586
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 152/365 (41%), Gaps = 14/365 (3%)
Query: 28 INKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDI 87
+N+A+ +F+ G + D T+ +I A A + +RM+
Sbjct: 415 LNEAMNVFNQMQEA---GCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFT 471
Query: 88 LLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMR 147
I G+ A ++F +M D +Y ++D+ + + + A+ YR+M+
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQ 531
Query: 148 KMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSV 207
G P V+ +I+++ L + ++ A +F EM + PD YG L++ + G+V
Sbjct: 532 NAGFEPDKVTYSIVMEVL-GHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNV 590
Query: 208 SEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTL 267
+A + + M G P+V T SL+ + + + EA LL+ M G+ P++ TY TL
Sbjct: 591 EKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY-TL 649
Query: 268 MDGLCKGGHSLQAMELL-EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQG 326
+ C G S M ++M + + +M G E + A LD M +
Sbjct: 650 LLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSED 709
Query: 327 LKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISP------SRATW--SLHVRMHNT 378
+ GL ++ + ++A + + + P S + W +LHV T
Sbjct: 710 RESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGT 769
Query: 379 VVQGL 383
V L
Sbjct: 770 AVTAL 774
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 175/364 (48%), Gaps = 17/364 (4%)
Query: 12 QITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEG 71
+I + Q++K D A+ F + GF+HD T+ M+ L A QF +
Sbjct: 328 RIDAYQANQVLKQMNDYGNALGFF--YWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINK 385
Query: 72 LLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILV 131
LL+ M ++ C + YGR + +A+ VF++M++ K + +Y T+IDI
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 132 EENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDS 191
+ + A+ Y+ M+ G+ P + +++I L K + +A ++F EM ++GC P+
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH-LPAAHKLFCEMVDQGCTPNL 504
Query: 192 YTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEE 251
TY +++ + + A +L+ +M+ GF P VTY+ ++ + L EA + E
Sbjct: 505 VTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTE 564
Query: 252 MKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGK 311
M++ P+ Y L+D K G+ +A + + M+ RPN+ T +L++ + K
Sbjct: 565 MQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNK 624
Query: 312 FSEAVEILDRMRLQGLKPNAGLYGKIIS-----------GFCA---ASSYQDAANFIDEM 357
+EA E+L M GL+P+ Y ++S GFC AS+ A F+ +M
Sbjct: 625 IAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKM 684
Query: 358 VLGG 361
G
Sbjct: 685 PAAG 688
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 150/314 (47%), Gaps = 9/314 (2%)
Query: 129 ILVEENHVKRAIAFYREM-RKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGC 187
+L + N A+ F+ + R+ G + ++ L + K+ + ++ EM GC
Sbjct: 337 VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQ-FGAINKLLDEMVRDGC 395
Query: 188 QPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIR 247
QP++ TY LI+ R ++EA +FN+M+E G P VTY +LI ++ L A+
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 248 LLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLC 307
+ + M+ G+ P+ FTYS +++ L K GH A +L MV + PN+VTY +++
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 308 KEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRA 367
K + A+++ M+ G +P+ Y ++ ++A EM P
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 368 TWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKA 427
+ L V + G NV+ +A+Q Y +M G+ + T + L+ F + + +A
Sbjct: 576 VYGLLVDL-----WGKAGNVE--KAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEA 628
Query: 428 ARILEEMISDGCVP 441
+L+ M++ G P
Sbjct: 629 YELLQNMLALGLRP 642
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 134/295 (45%), Gaps = 19/295 (6%)
Query: 170 ETIDSALQIFHEMP-------NRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEME-EKG 221
E + S L+ F P N G + D+Y ++ +M A F ++ + G
Sbjct: 303 ENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLK---QMNDYGNALGFFYWLKRQPG 359
Query: 222 FSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAM 281
F TYT+++ + ++ G +LL+EM ++G +PN TY+ L+ + + +AM
Sbjct: 360 FKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAM 419
Query: 282 ELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGF 341
+ M +P+ VTY TLI+ K G A+++ RM+ GL P+ Y II+
Sbjct: 420 NVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCL 479
Query: 342 CAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRT 401
A A EMV G +P+ T+++ + +H + A +LY M+
Sbjct: 480 GKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLH-------AKARNYQNALKLYRDMQN 532
Query: 402 RGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDR 456
G + T+ +++ G L +A + EM +PD+ ++ +++ LW +
Sbjct: 533 AGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLV-DLWGK 586
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 152/365 (41%), Gaps = 14/365 (3%)
Query: 28 INKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDI 87
+N+A+ +F+ G + D T+ +I A A + +RM+
Sbjct: 415 LNEAMNVFNQMQEA---GCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFT 471
Query: 88 LLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMR 147
I G+ A ++F +M D +Y ++D+ + + + A+ YR+M+
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQ 531
Query: 148 KMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSV 207
G P V+ +I+++ L + ++ A +F EM + PD YG L++ + G+V
Sbjct: 532 NAGFEPDKVTYSIVMEVL-GHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNV 590
Query: 208 SEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTL 267
+A + + M G P+V T SL+ + + + EA LL+ M G+ P++ TY TL
Sbjct: 591 EKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY-TL 649
Query: 268 MDGLCKGGHSLQAMELL-EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQG 326
+ C G S M ++M + + +M G E + A LD M +
Sbjct: 650 LLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSED 709
Query: 327 LKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISP------SRATW--SLHVRMHNT 378
+ GL ++ + ++A + + + P S + W +LHV T
Sbjct: 710 RESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGT 769
Query: 379 VVQGL 383
V L
Sbjct: 770 AVTAL 774
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 189/395 (47%), Gaps = 16/395 (4%)
Query: 67 RSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQ-LKFTQKSYLT 125
R+ E +L+ MK + ++ D+++ + + +P A R F + Q ++Y +
Sbjct: 146 RNMEAVLDEMKLD---LSHDLIVEVLERFRHARKP--AFRFFCWAAERQGFAHASRTYNS 200
Query: 126 VIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR 185
++ IL + + ++ EM G+ ++ + I +KA KE A+ IF M
Sbjct: 201 MMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKER-KKAVGIFELMKKY 258
Query: 186 GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEA 245
+ T L++ L R EA+ LF++++E+ F+P+++TYT L++G C+ NL EA
Sbjct: 259 KFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEA 317
Query: 246 IRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING 305
R+ +M +G++P++ ++ +++GL + A++L +M +K PN+ +Y +I
Sbjct: 318 ARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRD 377
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPS 365
CK+ A+E D M GL+P+A +Y +I+GF + EM G P
Sbjct: 378 FCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPD 437
Query: 366 RATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLN 425
T+ N +++ + + ++Y M I I TF+ ++K + +
Sbjct: 438 GKTY-------NALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYE 490
Query: 426 KAARILEEMISDGCVPDKGIWDVVMGGLWDRKKVR 460
+ +EMI G PD + V++ GL K R
Sbjct: 491 MGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSR 525
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 193/422 (45%), Gaps = 15/422 (3%)
Query: 13 ITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGL 72
++ L+ ++++ + K F AE GF H T+ M+S L QF + +
Sbjct: 159 LSHDLIVEVLERFRHARKPAFRFFCWAAE-RQGFAHASRTYNSMMSILAKTRQFETMVSV 217
Query: 73 LERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVE 132
LE M + + E + + + + A+ +F M+ ++ K ++ ++D L
Sbjct: 218 LEEMGTKGLLTMETFTIAM-KAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGR 276
Query: 133 ENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSY 192
K A + ++++ P++++ +L+ C+ + I++A +I+++M + G +PD
Sbjct: 277 AKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAA-RIWNDMIDHGLKPDIV 334
Query: 193 TYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEM 252
+ ++ GL R S+A +LF+ M+ KG P+V +YT +I C+ ++ AI ++M
Sbjct: 335 AHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 394
Query: 253 KKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKF 312
+G++P+ Y+ L+ G ELL+ M K + P+ TY LI + +
Sbjct: 395 VDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMP 454
Query: 313 SEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLH 372
I ++M ++P+ + I+ + A +Y+ DEM+ GI P ++++
Sbjct: 455 EHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVL 514
Query: 373 VRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILE 432
+R GL S S A + M +G+ + ++ F + G I E
Sbjct: 515 IR-------GLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ----PEIFE 563
Query: 433 EM 434
E+
Sbjct: 564 EL 565
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 113/255 (44%), Gaps = 4/255 (1%)
Query: 82 VVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIA 141
+V +++L G R + DAI++FH M+ +SY +I +++ ++ AI
Sbjct: 333 IVAHNVML---EGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIE 389
Query: 142 FYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGL 201
++ +M G+ P LI K+ +D+ ++ EM +G PD TY LI +
Sbjct: 390 YFDDMVDSGLQPDAAVYTCLITGFGTQKK-LDTVYELLKEMQEKGHPPDGKTYNALIKLM 448
Query: 202 CRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNV 261
++N+M + PS+ T+ ++ + N + +EM K GI P+
Sbjct: 449 ANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDD 508
Query: 262 FTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDR 321
+Y+ L+ GL G S +A LE M+ K + ++ Y + G+ E+ R
Sbjct: 509 NSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQR 568
Query: 322 MRLQGLKPNAGLYGK 336
+ G A ++ +
Sbjct: 569 AKFSGKFAAAEIFAR 583
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 189/395 (47%), Gaps = 16/395 (4%)
Query: 67 RSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQ-LKFTQKSYLT 125
R+ E +L+ MK + ++ D+++ + + +P A R F + Q ++Y +
Sbjct: 145 RNMEAVLDEMKLD---LSHDLIVEVLERFRHARKP--AFRFFCWAAERQGFAHDSRTYNS 199
Query: 126 VIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR 185
++ IL + + ++ EM G+ ++ + I +KA KE A+ IF M
Sbjct: 200 MMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKER-KKAVGIFELMKKY 257
Query: 186 GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEA 245
+ T L++ L R EA+ LF++++E+ F+P+++TYT L++G C+ NL EA
Sbjct: 258 KFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEA 316
Query: 246 IRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING 305
R+ +M +G++P++ ++ +++GL + A++L +M +K PN+ +Y +I
Sbjct: 317 ARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRD 376
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPS 365
CK+ A+E D M GL+P+A +Y +I+GF + EM G P
Sbjct: 377 FCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPD 436
Query: 366 RATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLN 425
T+ N +++ + + ++Y M I I TF+ ++K + +
Sbjct: 437 GKTY-------NALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYE 489
Query: 426 KAARILEEMISDGCVPDKGIWDVVMGGLWDRKKVR 460
+ +EMI G PD + V++ GL K R
Sbjct: 490 MGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSR 524
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 194/422 (45%), Gaps = 15/422 (3%)
Query: 13 ITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGL 72
++ L+ ++++ + K F AE GF HD T+ M+S L QF + +
Sbjct: 158 LSHDLIVEVLERFRHARKPAFRFFCWAAE-RQGFAHDSRTYNSMMSILAKTRQFETMVSV 216
Query: 73 LERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVE 132
LE M + + E + + + + A+ +F M+ ++ K ++ ++D L
Sbjct: 217 LEEMGTKGLLTMETFTIAM-KAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGR 275
Query: 133 ENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSY 192
K A + ++++ P++++ +L+ C+ + I++A +I+++M + G +PD
Sbjct: 276 AKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAA-RIWNDMIDHGLKPDIV 333
Query: 193 TYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEM 252
+ ++ GL R S+A +LF+ M+ KG P+V +YT +I C+ ++ AI ++M
Sbjct: 334 AHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 393
Query: 253 KKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKF 312
+G++P+ Y+ L+ G ELL+ M K + P+ TY LI + +
Sbjct: 394 VDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMP 453
Query: 313 SEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLH 372
I ++M ++P+ + I+ + A +Y+ DEM+ GI P ++++
Sbjct: 454 EHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVL 513
Query: 373 VRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILE 432
+R GL S S A + M +G+ + ++ F + G I E
Sbjct: 514 IR-------GLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ----PEIFE 562
Query: 433 EM 434
E+
Sbjct: 563 EL 564
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 113/255 (44%), Gaps = 4/255 (1%)
Query: 82 VVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIA 141
+V +++L G R + DAI++FH M+ +SY +I +++ ++ AI
Sbjct: 332 IVAHNVML---EGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIE 388
Query: 142 FYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGL 201
++ +M G+ P LI K+ +D+ ++ EM +G PD TY LI +
Sbjct: 389 YFDDMVDSGLQPDAAVYTCLITGFGTQKK-LDTVYELLKEMQEKGHPPDGKTYNALIKLM 447
Query: 202 CRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNV 261
++N+M + PS+ T+ ++ + N + +EM K GI P+
Sbjct: 448 ANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDD 507
Query: 262 FTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDR 321
+Y+ L+ GL G S +A LE M+ K + ++ Y + G+ E+ R
Sbjct: 508 NSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQR 567
Query: 322 MRLQGLKPNAGLYGK 336
+ G A ++ +
Sbjct: 568 AKFSGKFAAAEIFAR 582
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 183/414 (44%), Gaps = 43/414 (10%)
Query: 72 LLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILV 131
LL+ ++ ++++++ + +GR+ VF ++ +K + + Y VID LV
Sbjct: 132 LLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALV 191
Query: 132 EENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDS 191
+ N + A +++MR G P + NILI +CK K +D A+++ +M G +P+
Sbjct: 192 KSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCK-KGVVDEAIRLVKQMEQEGNRPNV 250
Query: 192 YTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGM--------------- 236
+TY LI+G G V EA + M + +P+ T + +HG+
Sbjct: 251 FTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVG 310
Query: 237 ------------------CQSDN--LGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGH 276
C S+N E + L ++ + G P+ T++ M L KG
Sbjct: 311 FMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHD 370
Query: 277 SLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGK 336
++ + + V++ +P Y L+ L +FSE L +M + GL + Y
Sbjct: 371 LVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNA 430
Query: 337 IISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLY 396
+I C A ++AA F+ EM GISP+ T+ NT + G D + +
Sbjct: 431 VIDCLCKARRIENAAMFLTEMQDRGISPNLVTF-------NTFLSGYSVRGDVKKVHGVL 483
Query: 397 LSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVM 450
+ G ++ TF +I C C+ ++ A +EM+ G P++ +++++
Sbjct: 484 EKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILI 537
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 195/447 (43%), Gaps = 49/447 (10%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCV---VTEDILL-TICRGYGRVHR 100
G + + +I LV +N A ++M+ + C T +IL+ +C+ G V
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKK-GVVD- 232
Query: 101 PLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNI 160
+AIR+ +ME + +Y +ID + V A+ MR + P+ ++
Sbjct: 233 --EAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRT 290
Query: 161 LIKAL------CKNKETI------DSALQ----------------------IFHEMPNRG 186
+ + CK E + DS LQ ++ RG
Sbjct: 291 FVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERG 350
Query: 187 CQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAI 246
PDS T+ ++ L + + E +F+ +G P Y L+ + + E
Sbjct: 351 YIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGD 410
Query: 247 RLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGL 306
R L++M +G+ +V++Y+ ++D LCK A L M + PN+VT+ T ++G
Sbjct: 411 RYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGY 470
Query: 307 CKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSR 366
G + +L+++ + G KP+ + II+ C A +DA + EM+ GI P+
Sbjct: 471 SVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNE 530
Query: 367 ATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNK 426
T+ N +++ CS D+ R+ +L+ M+ G+S ++ ++ I+ FCK + K
Sbjct: 531 ITY-------NILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKK 583
Query: 427 AARILEEMISDGCVPDKGIWDVVMGGL 453
A +L+ M+ G PD + ++ L
Sbjct: 584 AEELLKTMLRIGLKPDNFTYSTLIKAL 610
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 182/433 (42%), Gaps = 11/433 (2%)
Query: 10 PKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSA 69
P + T +++ + + +++A+ + E G R + T+ ++I + A + A
Sbjct: 213 PDRFTYNILIHGVCKKGVVDEAIRLVKQMEQE---GNRPNVFTYTILIDGFLIAGRVDEA 269
Query: 70 EGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDI 129
LE M+ E + T G R P A V + + Y V+
Sbjct: 270 LKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYC 329
Query: 130 LVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQP 189
L + K F R++ + G P + N + L K + +++ +IF +RG +P
Sbjct: 330 LSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETC-RIFDGFVSRGVKP 388
Query: 190 DSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLL 249
Y L+ L SE +M G SV +Y ++I +C++ + A L
Sbjct: 389 GFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFL 448
Query: 250 EEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKE 309
EM+ GI PN+ T++T + G G + +LE ++ +P+++T+ +IN LC+
Sbjct: 449 TEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRA 508
Query: 310 GKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATW 369
+ +A + M G++PN Y +I C+ + +M G+SP
Sbjct: 509 KEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPD---- 564
Query: 370 SLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAAR 429
+ +N +Q C +A +L +M G+ + T+ LIK + G ++A
Sbjct: 565 ---LYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEARE 621
Query: 430 ILEEMISDGCVPD 442
+ + GCVPD
Sbjct: 622 MFSSIERHGCVPD 634
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 109/210 (51%), Gaps = 1/210 (0%)
Query: 122 SYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHE 181
SY VID L + ++ A F EM+ GI P++V+ N + + + + +
Sbjct: 427 SYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGD-VKKVHGVLEK 485
Query: 182 MPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDN 241
+ G +PD T+ +IN LCR + +A + F EM E G P+ +TY LI C + +
Sbjct: 486 LLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGD 545
Query: 242 LGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGT 301
+++L +MK+NG+ P+++ Y+ + CK +A ELL+ M+ +P+ TY T
Sbjct: 546 TDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYST 605
Query: 302 LINGLCKEGKFSEAVEILDRMRLQGLKPNA 331
LI L + G+ SEA E+ + G P++
Sbjct: 606 LIKALSESGRESEAREMFSSIERHGCVPDS 635
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 124/273 (45%), Gaps = 1/273 (0%)
Query: 99 HRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSL 158
H ++ R+F +K YL ++ L+ + ++M G+ SV S
Sbjct: 369 HDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSY 428
Query: 159 NILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEME 218
N +I LCK + I++A EM +RG P+ T+ T ++G G V + + ++
Sbjct: 429 NAVIDCLCKARR-IENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLL 487
Query: 219 EKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSL 278
GF P V+T++ +I+ +C++ + +A +EM + GIEPN TY+ L+ C G +
Sbjct: 488 VHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTD 547
Query: 279 QAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKII 338
++++L M P++ Y I CK K +A E+L M GLKP+ Y +I
Sbjct: 548 RSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLI 607
Query: 339 SGFCAASSYQDAANFIDEMVLGGISPSRATWSL 371
+ +A + G P T L
Sbjct: 608 KALSESGRESEAREMFSSIERHGCVPDSYTKRL 640
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 174/428 (40%), Gaps = 72/428 (16%)
Query: 101 PLDAIRVFHKMEDFQLKFTQKSYLTVI--DILVEENHVKRAIAFYREMRKMGIPPSVVSL 158
PL ++R + + +F + + L + + L + + ++ +E+R G S +
Sbjct: 89 PLHSLRFYLWVSNFDPVYAKDQSLKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELM 148
Query: 159 NILIKA---LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFN 215
+LI + L K D +F ++ G +P + Y +I+ L + S+ A F
Sbjct: 149 CVLIGSWGRLGLAKYCND----VFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQ 204
Query: 216 EMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGG 275
+M G P TY LIHG+C+ + EAIRL+++M++ G PNVFTY+ L+DG G
Sbjct: 205 QMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAG 264
Query: 276 HSLQAMELLEMMVTKHNRPNMVTYGTLINGL------CKEGKF----------------- 312
+A++ LEMM + PN T T ++G+ CK +
Sbjct: 265 RVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYD 324
Query: 313 ------------SEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLG 360
E + L ++ +G P++ + +S + D V
Sbjct: 325 AVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSR 384
Query: 361 GISPSRATWSLHVRM----------------------------HNTVVQGLCSNVDSPRA 392
G+ P + + V+ +N V+ LC A
Sbjct: 385 GVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENA 444
Query: 393 FQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGG 452
M+ RGIS + TF+ + + RGD+ K +LE+++ G PD + +++
Sbjct: 445 AMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINC 504
Query: 453 LWDRKKVR 460
L K+++
Sbjct: 505 LCRAKEIK 512
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 187/421 (44%), Gaps = 47/421 (11%)
Query: 40 AEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLL-ERMKQE--NCVVTEDILLTICRGYG 96
AE GF + F +++ L A +F A L+ +R++ + + +V+ D + + R Y
Sbjct: 125 AEMKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYA 184
Query: 97 RVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVE----ENHVKRAIAFYREMRKMGIP 152
R AIR F ++ + L ++++L++ E HV+ A + + ++G
Sbjct: 185 RAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMY---LERIG-- 239
Query: 153 PSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKE 212
T+DS P + L+NG R + +A++
Sbjct: 240 -----------------GTMDS-----------NWVPSVRIFNILLNGWFRSRKLKQAEK 271
Query: 213 LFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLC 272
L+ EM+ P+VVTY +LI G C+ + A+ +LEEMK +E N ++ ++DGL
Sbjct: 272 LWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLG 331
Query: 273 KGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAG 332
+ G +A+ ++E + P +VTY +L+ CK G A +IL M +G+ P
Sbjct: 332 EAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTT 391
Query: 333 LYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRA 392
Y F + ++ N +++ G SP R T+ L ++M LC + A
Sbjct: 392 TYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKM-------LCEDGKLSLA 444
Query: 393 FQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGG 452
Q+ M+ RGI ++ T LI C+ L +A + + G +P + ++ G
Sbjct: 445 MQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNG 504
Query: 453 L 453
L
Sbjct: 505 L 505
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 120/258 (46%), Gaps = 1/258 (0%)
Query: 53 FGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKME 112
F ++++ + + + AE L E MK N T T+ GY R+ R A+ V +M+
Sbjct: 253 FNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMK 312
Query: 113 DFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETI 172
+++ + +ID L E + A+ P++V+ N L+K CK + +
Sbjct: 313 MAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGD-L 371
Query: 173 DSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSL 232
A +I M RG P + TY + E L+ ++ E G SP +TY +
Sbjct: 372 PGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLI 431
Query: 233 IHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHN 292
+ +C+ L A+++ +EMK GI+P++ T + L+ LC+ +A E + V +
Sbjct: 432 LKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGI 491
Query: 293 RPNMVTYGTLINGLCKEG 310
P +T+ + NGL +G
Sbjct: 492 IPQYITFKMIDNGLRSKG 509
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 126/277 (45%), Gaps = 20/277 (7%)
Query: 193 TYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSL------IHGMCQSDNLGEAI 246
T+ LI R G V +A F + + P + T L + +C+ ++ EA
Sbjct: 175 TFIVLIRRYARAGMVQQAIRAFEF--ARSYEPVCKSATELRLLEVLLDALCKEGHVREAS 232
Query: 247 RLLEE----MKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTL 302
LE M N + P+V ++ L++G + QA +L E M + +P +VTYGTL
Sbjct: 233 MYLERIGGTMDSNWV-PSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTL 291
Query: 303 INGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGI 362
I G C+ + A+E+L+ M++ ++ N ++ II G A +A ++ +
Sbjct: 292 IEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCES 351
Query: 363 SPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRG 422
P+ T+ N++V+ C D P A ++ M TRG+ T++ K F K
Sbjct: 352 GPTIVTY-------NSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHN 404
Query: 423 DLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
+ + ++I G PD+ + +++ L + K+
Sbjct: 405 KTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKL 441
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 128/356 (35%), Gaps = 103/356 (28%)
Query: 182 MPNRGCQPD-----SYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGM 236
+P+ C P S T + I+ L V L + ++E G PSV +L +
Sbjct: 52 VPDSTCTPPQQNTVSKTDLSTISNLLENTDVVPGSSLESALDETGIEPSVELVHALFDRL 111
Query: 237 CQSDNLGEAIRLLEEMKKN-GIEPNVFTYSTLMDGLCKG------------------GHS 277
S L ++ EMK + P++F ++++ LCK G +
Sbjct: 112 SSSPMLLHSVFKWAEMKPGFTLSPSLF--DSVVNSLCKAREFEIAWSLVFDRVRSDEGSN 169
Query: 278 LQAMELLEMMVTKHNRPNMVTYG------------------------TLINGLCKEGKFS 313
L + + +++ ++ R MV L++ LCKEG
Sbjct: 170 LVSADTFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVR 229
Query: 314 EAVEILDR--------------------------------------MRLQGLKPNAGLYG 335
EA L+R M+ +KP YG
Sbjct: 230 EASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYG 289
Query: 336 KIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQL 395
+I G+C Q A ++EM + A ++ + N ++ GL A
Sbjct: 290 TLIEGYCRMRRVQIAMEVLEEMKM-------AEMEINFMVFNPIIDGLGEAGRLSEA--- 339
Query: 396 YLSMRTRGISIE----IDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWD 447
L M R E I T++ L+K FCK GDL A++IL+ M++ G P ++
Sbjct: 340 -LGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYN 394
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 168/354 (47%), Gaps = 61/354 (17%)
Query: 77 KQENC-VVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENH 135
++E+C V+ +IL + +G++ + A VF K E+F K+Y ++ L + +
Sbjct: 222 EKESCGVLNLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSF 281
Query: 136 VKRAIAFYREMRKMGI-------------------------------------PPSVVSL 158
+ A + +M K G+ PP V+
Sbjct: 282 MDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA- 340
Query: 159 NILIKALCKNKETIDSALQIFHEMPN----RGCQPDSYTYGTLINGLCRMGSVSEAKELF 214
LI ALCKN TI A ++ ++ RG +P + +I+ LCRM +V +AK L
Sbjct: 341 -TLITALCKNDGTITFAQEMLGDLSGEARRRGIKP----FSDVIHSLCRMRNVKDAKALL 395
Query: 215 NEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKG 274
+M KG +P + ++H ++ +L EA +L+ M+ G++P+V+TY+ ++ G KG
Sbjct: 396 LDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKG 455
Query: 275 GHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLY 334
G +A E+L KH + + VTY LI G CK ++ EA+++L+ M G++PNA Y
Sbjct: 456 GMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEY 515
Query: 335 GKIISGFC-AASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNV 387
K+I FC A ++ A +EM G LH+ N + QGL V
Sbjct: 516 NKLIQSFCLKALDWEKAEVLFEEMKQKG---------LHL---NAISQGLIRAV 557
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 136/313 (43%), Gaps = 28/313 (8%)
Query: 137 KRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGT 196
K A + + + G P+ + + ++ALCK + +D A + +M G + G
Sbjct: 248 KAAFDVFSKTEEFGFTPNAKTYYLTLEALCK-RSFMDWACSVCEKMLKSGVLSEGEQMGN 306
Query: 197 LINGLCRMGSVSEAKELFN--EMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEM-- 252
+I C+ G EA ++ + +EK P V +LI +C++D I +EM
Sbjct: 307 IITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA--TLITALCKNDG---TITFAQEMLG 361
Query: 253 ------KKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGL 306
++ GI+P +S ++ LC+ + A LL M++K P + +++
Sbjct: 362 DLSGEARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHAC 417
Query: 307 CKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSR 366
K G EA E+L M +GLKP+ Y IISG+ +A + E +
Sbjct: 418 SKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAE-------AKK 470
Query: 367 ATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRG-DLN 425
L ++ +++G C + A +L M G+ D ++ LI+ FC + D
Sbjct: 471 KHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWE 530
Query: 426 KAARILEEMISDG 438
KA + EEM G
Sbjct: 531 KAEVLFEEMKQKG 543
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 108/261 (41%), Gaps = 51/261 (19%)
Query: 197 LINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNG 256
LI ++G A ++F++ EE GF+P+ TY + +C+ + A + E+M K+G
Sbjct: 237 LIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSG 296
Query: 257 IEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCK-EGKFSEA 315
+ ++ CK G + +A + E+ TK TLI LCK +G + A
Sbjct: 297 VLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFA 356
Query: 316 VEILDRM----RLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSL 371
E+L + R +G+KP + +I C
Sbjct: 357 QEMLGDLSGEARRRGIKP----FSDVIHSLC----------------------------- 383
Query: 372 HVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARIL 431
RM N V +A L L M ++G + F+ ++ K GDL++A +L
Sbjct: 384 --RMRN---------VKDAKA--LLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVL 430
Query: 432 EEMISDGCVPDKGIWDVVMGG 452
+ M S G PD + V++ G
Sbjct: 431 KLMESRGLKPDVYTYTVIISG 451
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 164/377 (43%), Gaps = 23/377 (6%)
Query: 78 QENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTV----------- 126
Q N + + +C Y P+ +F + D + KS+L
Sbjct: 90 QNNVLFSLWFFRWLCSNYDYTPGPVSLNILFGALLDGKAVKAAKSFLDTTGFKPEPTLLE 149
Query: 127 --IDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPN 184
+ L EE V+ AI Y ++ MGI SVV+ N ++ C +D ++ EM
Sbjct: 150 QYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLG-CLKARKLDRFWELHKEMVE 208
Query: 185 RGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGE 244
+ DS LI LC G VSE EL + ++G P Y LI G C+ N
Sbjct: 209 S--EFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYAC 266
Query: 245 AIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLIN 304
+L M P+++ Y ++ GLC L+A + + + K P+ V Y T+I
Sbjct: 267 MSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIR 326
Query: 305 GLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISP 364
G C++G A ++ M +G++PN Y +I G F +EM+ G
Sbjct: 327 GFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGG 386
Query: 365 SRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDL 424
+ + NT+++G CS+ S AF+++ +M G++ T++ LIK FCK +
Sbjct: 387 TMLS-------CNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKV 439
Query: 425 NKAARILEEMISDGCVP 441
K ++ +E+ + G P
Sbjct: 440 EKGLKLYKELKALGLKP 456
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 137/317 (43%), Gaps = 13/317 (4%)
Query: 72 LLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILV 131
+L+ M + VVT + +L C R LD HK E + +F + +I L
Sbjct: 170 VLKDMGISSSVVTCNSVLLGCLK----ARKLDRFWELHK-EMVESEFDSERIRCLIRALC 224
Query: 132 EENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCK--NKETIDSALQIFHEMPNRGCQP 189
+ V ++ K G+ P LI C+ N + ++ H M P
Sbjct: 225 DGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMS---EVLHTMIAWNHFP 281
Query: 190 DSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLL 249
Y Y +I GLC EA +F +++KG++P V YT++I G C+ LG A +L
Sbjct: 282 SMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLW 341
Query: 250 EEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKE 309
EM K G+ PN F Y+ ++ G K G M+ M++ T+I G C
Sbjct: 342 FEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSH 401
Query: 310 GKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATW 369
GK EA EI M G+ PNA Y +I GFC + + E+ G+ PS +
Sbjct: 402 GKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAY 461
Query: 370 SLHVR---MHNTVVQGL 383
+ VR M ++V L
Sbjct: 462 AALVRNLKMSDSVATSL 478
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 100/201 (49%), Gaps = 1/201 (0%)
Query: 153 PSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKE 212
PS+ +IK LC NK+ ++ A IF + ++G PD Y T+I G C G + A++
Sbjct: 281 PSMYIYQKIIKGLCMNKKQLE-AYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARK 339
Query: 213 LFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLC 272
L+ EM +KG P+ Y +IHG + + EM +NG + + +T++ G C
Sbjct: 340 LWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFC 399
Query: 273 KGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAG 332
G S +A E+ + M PN +TY LI G CKE K + +++ ++ GLKP+
Sbjct: 400 SHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGM 459
Query: 333 LYGKIISGFCAASSYQDAANF 353
Y ++ + S + N
Sbjct: 460 AYAALVRNLKMSDSVATSLNL 480
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 101/227 (44%), Gaps = 1/227 (0%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
G + +IS + +L M N + I I +G + L+A
Sbjct: 243 GLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEA 302
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
+F ++D + Y T+I E+ + A + EM K G+ P+ + N++I
Sbjct: 303 YCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHG 362
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
K E I ++EM G + T+I G C G EA E+F M E G +P
Sbjct: 363 HFKRGE-ISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTP 421
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGL 271
+ +TY +LI G C+ + + + ++L +E+K G++P+ Y+ L+ L
Sbjct: 422 NAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 86/177 (48%), Gaps = 1/177 (0%)
Query: 72 LLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILV 131
+ + +K + + T+ RG+ A +++ +M ++ + +Y +I
Sbjct: 305 IFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHF 364
Query: 132 EENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDS 191
+ + AFY EM + G +++S N +IK C + ++ D A +IF M G P++
Sbjct: 365 KRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKS-DEAFEIFKNMSETGVTPNA 423
Query: 192 YTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRL 248
TY LI G C+ V + +L+ E++ G PS + Y +L+ + SD++ ++ L
Sbjct: 424 ITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNLKMSDSVATSLNL 480
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 158/344 (45%), Gaps = 28/344 (8%)
Query: 117 KFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSAL 176
K+ K + VID+L +++KR +VV +++L++ L K E + +
Sbjct: 173 KYKNKQFRIVIDML---DYMKRN------------NKTVVLVDVLLEILRKYCERYLTHV 217
Query: 177 QIFHEMPN--RGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIH 234
Q F + QP+ + L++ LC+ G V E + L M + P T+ L
Sbjct: 218 QKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFF 276
Query: 235 GMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKH--- 291
G C+ + +A++LLEEM + G +P FTY +D C+ G +A +L + M+TK
Sbjct: 277 GWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAV 336
Query: 292 NRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAA 351
+ P T+ +I L K K E E++ RM G P+ Y +I G C A +A
Sbjct: 337 SAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAY 396
Query: 352 NFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTF 411
F+DEM G P T++ +R+ LC N + A +LY M + + T+
Sbjct: 397 KFLDEMSNKGYPPDIVTYNCFLRV-------LCENRKTDEALKLYGRMVESRCAPSVQTY 449
Query: 412 DCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWD 455
+ LI F + D + A EM CV D + ++ GL+D
Sbjct: 450 NMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFD 493
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 173/387 (44%), Gaps = 60/387 (15%)
Query: 40 AEYSNGFRHDHTTFGVMISRLVAAN----QFRSAEGLLERMKQEN-CVVTEDILLTICRG 94
A + + H+ + MI L + QFR +L+ MK+ N VV D+LL I R
Sbjct: 149 AGHQEHYSHEPIAYNEMIDILSSTKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRK 208
Query: 95 YGRVHRPLDAIRVFHKMEDFQLKFTQ---KSYLTVIDILVEENHVKRAIAFYREMRKMGI 151
Y R L ++ F K + ++K TQ ++ ++D L + VK A R MR +
Sbjct: 209 Y--CERYLTHVQKFAKRKRIRVK-TQPEINAFNMLLDALCKCGLVKEGEALLRRMRH-RV 264
Query: 152 PPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAK 211
P + N+L C+ ++ A+++ EM G +P+++TY I+ C+ G V EA
Sbjct: 265 KPDANTFNVLFFGWCRVRDP-KKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAA 323
Query: 212 ELFNEMEEKGFS--------------------------------------PSVVTYTSLI 233
+LF+ M KG + P V TY +I
Sbjct: 324 DLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVI 383
Query: 234 HGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNR 293
GMC ++ + EA + L+EM G P++ TY+ + LC+ + +A++L MV
Sbjct: 384 EGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCA 443
Query: 294 PNMVTYGTLINGLCK----EGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQD 349
P++ TY LI+ + +G F+ E+ R +Q ++ Y +I+G ++
Sbjct: 444 PSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVET----YCAMINGLFDCHRAKE 499
Query: 350 AANFIDEMVLGGIS-PSRATWSLHVRM 375
A ++E+V G+ P R S +R+
Sbjct: 500 ACFLLEEVVNKGLKLPYRVFDSFLMRL 526
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 13/206 (6%)
Query: 258 EPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHN-RPNMVTYGTLINGLCKEGKFSEAV 316
+P + ++ L+D LCK G + LL M +H +P+ T+ L G C+ +A+
Sbjct: 231 QPEINAFNMLLDALCKCGLVKEGEALLRRM--RHRVKPDANTFNVLFFGWCRVRDPKKAM 288
Query: 317 EILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGIS---PSRATWSLHV 373
++L+ M G KP Y I FC A +AA+ D M+ G + P+ T++L
Sbjct: 289 KLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFAL-- 346
Query: 374 RMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEE 433
++ L N + F+L M + G ++ T+ +I+ C +++A + L+E
Sbjct: 347 -----MIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDE 401
Query: 434 MISDGCVPDKGIWDVVMGGLWDRKKV 459
M + G PD ++ + L + +K
Sbjct: 402 MSNKGYPPDIVTYNCFLRVLCENRKT 427
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 1/155 (0%)
Query: 122 SYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHE 181
+Y VI+ + V A F EM G PP +V+ N ++ LC+N++T D AL+++
Sbjct: 378 TYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKT-DEALKLYGR 436
Query: 182 MPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDN 241
M C P TY LI+ M A + EM+++ V TY ++I+G+
Sbjct: 437 MVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHR 496
Query: 242 LGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGH 276
EA LLEE+ G++ + + + L + G+
Sbjct: 497 AKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGN 531
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 183/427 (42%), Gaps = 46/427 (10%)
Query: 28 INKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDI 87
+++++ F+ AT+ + H + MI QF A L++ MK N ++ +
Sbjct: 130 LHQSLAFFNWATSRDDYDHKSPHP-YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIET 188
Query: 88 LLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMR 147
+ R Y R +A+ F++MED+
Sbjct: 189 FTILIRRYVRAGLASEAVHCFNRMEDY--------------------------------- 215
Query: 148 KMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSV 207
G P ++ +I+I L + K A F + +R +PD Y L+ G CR G +
Sbjct: 216 --GCVPDKIAFSIVISNLSR-KRRASEAQSFFDSLKDRF-EPDVIVYTNLVRGWCRAGEI 271
Query: 208 SEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTL 267
SEA+++F EM+ G P+V TY+ +I +C+ + A + +M +G PN T++ L
Sbjct: 272 SEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNL 331
Query: 268 MDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGL 327
M K G + + +++ M P+ +TY LI C++ AV++L+ M +
Sbjct: 332 MRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKC 391
Query: 328 KPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNV 387
+ NA + I A +M+ P+ T+++ +RM +
Sbjct: 392 EVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRM-------FVGSK 444
Query: 388 DSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCV-PDKGIW 446
+ ++ M + + ++T+ L+ FC G N A ++ +EM+ + C+ P ++
Sbjct: 445 STDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLY 504
Query: 447 DVVMGGL 453
++V+ L
Sbjct: 505 EMVLAQL 511
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 157/323 (48%), Gaps = 14/323 (4%)
Query: 10 PKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSA 69
P +I S+V + ++ ++A FDS + F D + ++ A + A
Sbjct: 219 PDKIAFSIVISNLSRKRRASEAQSFFDS----LKDRFEPDVIVYTNLVRGWCRAGEISEA 274
Query: 70 EGLLERMK----QENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLT 125
E + + MK + N ++ +CR G++ R D VF M D ++
Sbjct: 275 EKVFKEMKLAGIEPNVYTYSIVIDALCRC-GQISRAHD---VFADMLDSGCAPNAITFNN 330
Query: 126 VIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR 185
++ + V+ ++ + Y +M+K+G P ++ N LI+A C++ E +++A+++ + M +
Sbjct: 331 LMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRD-ENLENAVKVLNTMIKK 389
Query: 186 GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEA 245
C+ ++ T+ T+ + + V+ A ++++M E P+ VTY L+ S +
Sbjct: 390 KCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMV 449
Query: 246 IRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL-EMMVTKHNRPNMVTYGTLIN 304
+++ +EM +EPNV TY L+ C GH A +L EM+ K P++ Y ++
Sbjct: 450 LKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLA 509
Query: 305 GLCKEGKFSEAVEILDRMRLQGL 327
L + G+ + E++++M +GL
Sbjct: 510 QLRRAGQLKKHEELVEKMIQKGL 532
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 170/349 (48%), Gaps = 14/349 (4%)
Query: 49 DHTTFGVMISRLVAANQFRSAEG---LLERMKQENCVVTEDILLTICRGYGRVHRPLDAI 105
D+ T ++I+ L A RSA+ + E+M ++ ++D+ + + + +A+
Sbjct: 307 DNVTCAILITTLRKAG--RSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEAL 364
Query: 106 RVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKAL 165
+ +ME ++ Y T++D + NH++ + EMR G+ PS + NIL+ A
Sbjct: 365 VIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAY 424
Query: 166 CKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSE-AKELFNEMEEKGFSP 224
+ + D + EM + G +P+ +Y LI+ R +S+ A + F M++ G P
Sbjct: 425 ARRMQP-DIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKP 483
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
S +YT+LIH S +A EEM K GI+P+V TY++++D + G + + ME+
Sbjct: 484 SSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIW 543
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAA 344
++M+ + + +TY TL++G K+G + EA +++ GL+P+ Y +++ +
Sbjct: 544 KLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARG 603
Query: 345 SSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAF 393
+ EM + P T+S T++ D RAF
Sbjct: 604 GQDAKLPQLLKEMAALNLKPDSITYS-------TMIYAFVRVRDFKRAF 645
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 160/357 (44%), Gaps = 4/357 (1%)
Query: 9 WPKQITSS-LVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFR 67
+P +T + L+ L KA + + +F+ + G + FG ++
Sbjct: 305 YPDNVTCAILITTLRKAGRSAKEVWEIFEKMS---EKGVKWSQDVFGGLVKSFCDEGLKE 361
Query: 68 SAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVI 127
A + M+++ + T+ Y + + + +F +M D LK + +Y ++
Sbjct: 362 EALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILM 421
Query: 128 DILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGC 187
D REM +G+ P+V S LI A + K+ D A F M G
Sbjct: 422 DAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGL 481
Query: 188 QPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIR 247
+P S++Y LI+ G +A F EM ++G PSV TYTS++ +S + G+ +
Sbjct: 482 KPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLME 541
Query: 248 LLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLC 307
+ + M + I+ TY+TL+DG K G ++A +++ +P+++TY L+N
Sbjct: 542 IWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYA 601
Query: 308 KEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISP 364
+ G+ ++ ++L M LKP++ Y +I F ++ A + MV G P
Sbjct: 602 RGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVP 658
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 145/331 (43%), Gaps = 8/331 (2%)
Query: 123 YLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEM 182
Y I L A Y M K+ + P V+ ILI L K + +IF +M
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKM 335
Query: 183 PNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNL 242
+G + +G L+ C G EA + EME+KG + + Y +L+ +S+++
Sbjct: 336 SEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHI 395
Query: 243 GEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTL 302
E L EM+ G++P+ TY+ LMD + LL M PN+ +Y L
Sbjct: 396 EEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCL 455
Query: 303 INGLCKEGKFSE-AVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGG 361
I+ + K S+ A + RM+ GLKP++ Y +I + + ++ A +EM G
Sbjct: 456 ISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEG 515
Query: 362 ISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKR 421
I PS V + +V+ + D+ + +++ M I T++ L+ F K+
Sbjct: 516 IKPS-------VETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQ 568
Query: 422 GDLNKAARILEEMISDGCVPDKGIWDVVMGG 452
G +A ++ E G P ++++M
Sbjct: 569 GLYIEARDVVSEFSKMGLQPSVMTYNMLMNA 599
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 143/332 (43%), Gaps = 8/332 (2%)
Query: 8 KWPKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFR 67
KW + + LV+ ++ + + L+ + + G R + + ++ +N
Sbjct: 341 KWSQDVFGGLVKSF--CDEGLKEEALVIQTEMEK--KGIRSNTIVYNTLMDAYNKSNHIE 396
Query: 68 SAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVI 127
EGL M+ + + + Y R +P + +MED L+ KSY +I
Sbjct: 397 EVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLI 456
Query: 128 DILVEENHVK--RAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR 185
+ A AF R M+K+G+ PS S LI A + + A F EM
Sbjct: 457 SAYGRTKKMSDMAADAFLR-MKKVGLKPSSHSYTALIHAYSVSGWH-EKAYASFEEMCKE 514
Query: 186 GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEA 245
G +P TY ++++ R G + E++ M + + +TY +L+ G + EA
Sbjct: 515 GIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEA 574
Query: 246 IRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING 305
++ E K G++P+V TY+ LM+ +GG + +LL+ M + +P+ +TY T+I
Sbjct: 575 RDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYA 634
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKI 337
+ F A M G P+ Y K+
Sbjct: 635 FVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 187/402 (46%), Gaps = 21/402 (5%)
Query: 47 RHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIR 106
+ D T+ +I+ A Q+R A L++ M + + + G +A+
Sbjct: 175 KPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALE 234
Query: 107 VFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALC 166
V KM D + ++ V+ +A++++ M+ + P + NI+I L
Sbjct: 235 VCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLS 294
Query: 167 KNKETIDSALQIFHEMPNR--GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
K ++ AL +F+ M + C+PD T+ ++++ G + + +F M +G P
Sbjct: 295 KLGQS-SQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKP 353
Query: 225 SVVTYTSL-----IHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQ 279
++V+Y +L +HGM G A+ +L ++K+NGI P+V +Y+ L++ + +
Sbjct: 354 NIVSYNALMGAYAVHGMS-----GTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGK 408
Query: 280 AMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIIS 339
A E+ MM + +PN+VTY LI+ G +EAVEI +M G+KPN + +
Sbjct: 409 AKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNV---VSVCT 465
Query: 340 GFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSM 399
A S + N + VL + SR +L+ +N+ + + + +A LY SM
Sbjct: 466 LLAACSRSKKKVNV--DTVLSA-AQSRGI-NLNTAAYNSAIGSYINAAELEKAIALYQSM 521
Query: 400 RTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVP 441
R + + + TF LI C+ +A L+EM D +P
Sbjct: 522 RKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM-EDLSIP 562
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/439 (22%), Positives = 189/439 (43%), Gaps = 18/439 (4%)
Query: 10 PKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSA 69
P +T ++V K+ + +KA+ F+ R D TTF ++I L Q A
Sbjct: 246 PDLVTHNIVLSAYKSGRQYSKALSYFELMKGA---KVRPDTTTFNIIIYCLSKLGQSSQA 302
Query: 70 EGLLERMKQENCVVTEDILL--TICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVI 127
L M+++ D++ +I Y + VF M LK SY ++
Sbjct: 303 LDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALM 362
Query: 128 DILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGC 187
A++ ++++ GI P VVS L+ + ++++ A ++F M
Sbjct: 363 GAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQP-GKAKEVFLMMRKERR 421
Query: 188 QPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIR 247
+P+ TY LI+ G ++EA E+F +ME+ G P+VV+ +L+ +S
Sbjct: 422 KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDT 481
Query: 248 LLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLC 307
+L + GI N Y++ + +A+ L + M K + + VT+ LI+G C
Sbjct: 482 VLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSC 541
Query: 308 KEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRA 367
+ K+ EA+ L M + +Y ++ + +A + ++M + G P
Sbjct: 542 RMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPD-- 599
Query: 368 TWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDC--LIKCFCKRGDLN 425
V + +++ ++ +A +L+L M G IE D+ C L++ F K G +
Sbjct: 600 -----VIAYTSMLHAYNASEKWGKACELFLEMEANG--IEPDSIACSALMRAFNKGGQPS 652
Query: 426 KAARILEEMISDGCVPDKG 444
+L +++ + +P G
Sbjct: 653 NVF-VLMDLMREKEIPFTG 670
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 136/321 (42%), Gaps = 45/321 (14%)
Query: 159 NILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEME 218
N++I+ L +D A +F EM C+PD+ TY LIN R G A L ++M
Sbjct: 147 NMMIR-LHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 219 EKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSL 278
+PS TY +LI+ S N EA+ + ++M NG+ P++ T++ ++ G
Sbjct: 206 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 265
Query: 279 QAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMR--------------- 323
+A+ E+M RP+ T+ +I L K G+ S+A+++ + MR
Sbjct: 266 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 325
Query: 324 ----------------------LQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGG 361
+GLKPN Y ++ + A + + ++ G
Sbjct: 326 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 385
Query: 362 ISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKR 421
I P +++ + + Q +A +++L MR + T++ LI +
Sbjct: 386 IIPDVVSYTCLLNSYGRSRQ-------PGKAKEVFLMMRKERRKPNVVTYNALIDAYGSN 438
Query: 422 GDLNKAARILEEMISDGCVPD 442
G L +A I +M DG P+
Sbjct: 439 GFLAEAVEIFRQMEQDGIKPN 459
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/515 (21%), Positives = 195/515 (37%), Gaps = 119/515 (23%)
Query: 10 PKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSA 69
P +T + + L + +I +F++ AE G + + ++ ++ +A
Sbjct: 318 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAE---GLKPNIVSYNALMGAYAVHGMSGTA 374
Query: 70 EGLLERMKQENCVVTEDILLTIC--RGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVI 127
+L +KQ + D++ C YGR +P A VF M + K +Y +I
Sbjct: 375 LSVLGDIKQNG--IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALI 432
Query: 128 DILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETI--------------- 172
D + A+ +R+M + GI P+VVS+ L+ A ++K+ +
Sbjct: 433 DAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGIN 492
Query: 173 -------------------DSALQIFHEMPNRGCQPDSYTYGTLINGLCRM--------- 204
+ A+ ++ M + + DS T+ LI+G CRM
Sbjct: 493 LNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISY 552
Query: 205 --------------------------GSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQ 238
G V+EA+ +FN+M+ G P V+ YTS++H
Sbjct: 553 LKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNA 612
Query: 239 SDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVT 298
S+ G+A L EM+ NGIEP+ S LM KGG L+++M
Sbjct: 613 SEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMRE--------- 663
Query: 299 YGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMV 358
KE F+ AV F A ++ Q+ ID +
Sbjct: 664 ---------KEIPFTGAV--------------------FFEIFSACNTLQEWKRAID--L 692
Query: 359 LGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCF 418
+ + P SL + + N ++ + +L+ + G+ I + T+ L++
Sbjct: 693 IQMMDPYLP--SLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHL 750
Query: 419 CKRGDLNKAARILEEMISDGCVPDKGIW-DVVMGG 452
G+ K +LE M G P ++ D++ G
Sbjct: 751 LAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFG 785
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 187/402 (46%), Gaps = 21/402 (5%)
Query: 47 RHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIR 106
+ D T+ +I+ A Q+R A L++ M + + + G +A+
Sbjct: 43 KPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALE 102
Query: 107 VFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALC 166
V KM D + ++ V+ +A++++ M+ + P + NI+I L
Sbjct: 103 VCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLS 162
Query: 167 KNKETIDSALQIFHEMPNR--GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
K ++ AL +F+ M + C+PD T+ ++++ G + + +F M +G P
Sbjct: 163 KLGQS-SQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKP 221
Query: 225 SVVTYTSL-----IHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQ 279
++V+Y +L +HGM G A+ +L ++K+NGI P+V +Y+ L++ + +
Sbjct: 222 NIVSYNALMGAYAVHGMS-----GTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGK 276
Query: 280 AMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIIS 339
A E+ MM + +PN+VTY LI+ G +EAVEI +M G+KPN + +
Sbjct: 277 AKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNV---VSVCT 333
Query: 340 GFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSM 399
A S + N + VL + SR +L+ +N+ + + + +A LY SM
Sbjct: 334 LLAACSRSKKKVNV--DTVLSA-AQSRGI-NLNTAAYNSAIGSYINAAELEKAIALYQSM 389
Query: 400 RTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVP 441
R + + + TF LI C+ +A L+EM D +P
Sbjct: 390 RKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM-EDLSIP 430
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 179/417 (42%), Gaps = 17/417 (4%)
Query: 10 PKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSA 69
P +T ++V K+ + +KA+ F+ R D TTF ++I L Q A
Sbjct: 114 PDLVTHNIVLSAYKSGRQYSKALSYFELMKGA---KVRPDTTTFNIIIYCLSKLGQSSQA 170
Query: 70 EGLLERMKQENCVVTEDILL--TICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVI 127
L M+++ D++ +I Y + VF M LK SY ++
Sbjct: 171 LDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALM 230
Query: 128 DILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGC 187
A++ ++++ GI P VVS L+ + ++++ A ++F M
Sbjct: 231 GAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQP-GKAKEVFLMMRKERR 289
Query: 188 QPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIR 247
+P+ TY LI+ G ++EA E+F +ME+ G P+VV+ +L+ +S
Sbjct: 290 KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDT 349
Query: 248 LLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLC 307
+L + GI N Y++ + +A+ L + M K + + VT+ LI+G C
Sbjct: 350 VLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSC 409
Query: 308 KEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRA 367
+ K+ EA+ L M + +Y ++ + +A + ++M + G P
Sbjct: 410 RMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVI 469
Query: 368 TWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDC--LIKCFCKRG 422
++ + +N ++ +A +L+L M G IE D+ C L++ F K G
Sbjct: 470 AYTSMLHAYN-------ASEKWGKACELFLEMEANG--IEPDSIACSALMRAFNKGG 517
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 111/517 (21%), Positives = 195/517 (37%), Gaps = 123/517 (23%)
Query: 10 PKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSA 69
P +T + + L + +I +F++ AE G + + ++ ++ +A
Sbjct: 186 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAE---GLKPNIVSYNALMGAYAVHGMSGTA 242
Query: 70 EGLLERMKQENCVVTEDILLTIC--RGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVI 127
+L +KQ + D++ C YGR +P A VF M + K +Y +I
Sbjct: 243 LSVLGDIKQNG--IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALI 300
Query: 128 DILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETI--------------- 172
D + A+ +R+M + GI P+VVS+ L+ A ++K+ +
Sbjct: 301 DAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGIN 360
Query: 173 -------------------DSALQIFHEMPNRGCQPDSYTYGTLINGLCRM--------- 204
+ A+ ++ M + + DS T+ LI+G CRM
Sbjct: 361 LNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISY 420
Query: 205 --------------------------GSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQ 238
G V+EA+ +FN+M+ G P V+ YTS++H
Sbjct: 421 LKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNA 480
Query: 239 SDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVT 298
S+ G+A L EM+ NGIEP+ S LM KGG L+++M
Sbjct: 481 SEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMRE--------- 531
Query: 299 YGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEM- 357
KE F+ AV + +I S ++ A + I M
Sbjct: 532 ---------KEIPFTGAV-----------------FFEIFSACNTLQEWKRAIDLIQMMD 565
Query: 358 -VLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIK 416
L +S LH+ + V+ + +L+ + G+ I + T+ L++
Sbjct: 566 PYLPSLSIGLTNQMLHLFGKSGKVEAM---------MKLFYKIIASGVGINLKTYAILLE 616
Query: 417 CFCKRGDLNKAARILEEMISDGCVPDKGIW-DVVMGG 452
G+ K +LE M G P ++ D++ G
Sbjct: 617 HLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFG 653
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 130/308 (42%), Gaps = 44/308 (14%)
Query: 172 IDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTS 231
+D A +F EM C+PD+ TY LIN R G A L ++M +PS TY +
Sbjct: 27 VDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNN 86
Query: 232 LIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKH 291
LI+ S N EA+ + ++M NG+ P++ T++ ++ G +A+ E+M
Sbjct: 87 LINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAK 146
Query: 292 NRPNMVTYGTLINGLCKEGKFSEAVEILDRMR---------------------------- 323
RP+ T+ +I L K G+ S+A+++ + MR
Sbjct: 147 VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIEN 206
Query: 324 ---------LQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVR 374
+GLKPN Y ++ + A + + ++ GI P +++ +
Sbjct: 207 CRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLN 266
Query: 375 MHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEM 434
+ Q +A +++L MR + T++ LI + G L +A I +M
Sbjct: 267 SYGRSRQ-------PGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM 319
Query: 435 ISDGCVPD 442
DG P+
Sbjct: 320 EQDGIKPN 327
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 113/249 (45%), Gaps = 5/249 (2%)
Query: 194 YGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMK 253
Y +I R V +A+ LF EM++ P TY +LI+ ++ A+ L+++M
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 254 KNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFS 313
+ I P+ TY+ L++ G+ +A+E+ + M P++VT+ +++ ++S
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 314 EAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHV 373
+A+ + M+ ++P+ + II A + + M +
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 193
Query: 374 RMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEE 433
MH V+G +++ RA ++ +M G+ I +++ L+ + G A +L +
Sbjct: 194 IMHLYSVKG---EIENCRA--VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGD 248
Query: 434 MISDGCVPD 442
+ +G +PD
Sbjct: 249 IKQNGIIPD 257
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 160/352 (45%), Gaps = 15/352 (4%)
Query: 18 VEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMK 77
V +++K KD NKA+L D + ++I+ LV AN+ A LL +
Sbjct: 421 VSEIVKLLKDHNKAIL--------------PDSDSLSIVINCLVKANKVDMAVTLLHDIV 466
Query: 78 QENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVK 137
Q + + I G + R +++++ +M+D ++ +Q + + L E
Sbjct: 467 QNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFV 526
Query: 138 RAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTL 197
A+ ++MR G P + L+K LC+N +D A + ++ G
Sbjct: 527 GALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVD-ACKYLDDVAGEGFLGHMVASTAA 585
Query: 198 INGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGI 257
I+GL + V ELF ++ G P V+ Y LI +C++ EA L EM G+
Sbjct: 586 IDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGL 645
Query: 258 EPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVE 317
+P V TY++++DG CK G + + + M P+++TY +LI+GLC G+ SEA+
Sbjct: 646 KPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIF 705
Query: 318 ILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATW 369
+ M+ + PN + +I G C +A + EM + P A +
Sbjct: 706 RWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 145/322 (45%), Gaps = 9/322 (2%)
Query: 132 EENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDS 191
E + V + ++ K I P SL+I+I L K + +D A+ + H++ G P
Sbjct: 417 ESDGVSEIVKLLKDHNK-AILPDSDSLSIVINCLVKANK-VDMAVTLLHDIVQNGLIPGP 474
Query: 192 YTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEE 251
Y +I G+C+ G E+ +L EM++ G PS T + + + + A+ LL++
Sbjct: 475 MMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKK 534
Query: 252 MKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGK 311
M+ G EP + + L+ LC+ G ++ A + L+ + + +MV I+GL K
Sbjct: 535 MRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEG 594
Query: 312 FSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSL 371
+E+ + G P+ Y +I C A +A +EMV G+ P+ AT+
Sbjct: 595 VDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATY-- 652
Query: 372 HVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARIL 431
N+++ G C + R + M + ++ T+ LI C G ++A
Sbjct: 653 -----NSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRW 707
Query: 432 EEMISDGCVPDKGIWDVVMGGL 453
EM C P++ + ++ GL
Sbjct: 708 NEMKGKDCYPNRITFMALIQGL 729
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 142/321 (44%), Gaps = 8/321 (2%)
Query: 126 VIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR 185
VI+ LV+ N V A+ ++ + G+ P + N +I+ +CK + + +L++ EM +
Sbjct: 445 VINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRS-EESLKLLGEMKDA 503
Query: 186 GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEA 245
G +P +T + L A +L +M GF P + T L+ +C++ +A
Sbjct: 504 GVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDA 563
Query: 246 IRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING 305
+ L+++ G ++ + +DGL K + +EL + + P+++ Y LI
Sbjct: 564 CKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKA 623
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPS 365
LCK + EA + + M +GLKP Y +I G+C + I M +P
Sbjct: 624 LCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPD 683
Query: 366 RATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLN 425
T++ +++ GLC++ A + M+ + TF LI+ CK G
Sbjct: 684 VITYT-------SLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSG 736
Query: 426 KAARILEEMISDGCVPDKGIW 446
+A EM PD ++
Sbjct: 737 EALVYFREMEEKEMEPDSAVY 757
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 105/483 (21%), Positives = 195/483 (40%), Gaps = 63/483 (13%)
Query: 12 QITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEG 71
++ + +VE ++ K A L F+ A+ + G+R+D + M S L A Q S +
Sbjct: 70 ELNTKVVETVLNGFKRWGLAYLFFNWASKQ--EGYRNDMYAYNAMASILSRARQNASLKA 127
Query: 72 LLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQK-SYLTVIDIL 130
L+ + C ++ R G +A VF ++ + L +Y +++ +
Sbjct: 128 LVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAI 187
Query: 131 VEENH--VKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQ 188
+ N V+ A +EMR G +L +++ C ++ + AL +F+E+ +RG
Sbjct: 188 SKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKS-ERALSVFNEILSRG-W 245
Query: 189 PDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRL 248
D + L+ C+ G V +A EL +EE+ + TY LIHG + + +A +L
Sbjct: 246 LDEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQL 305
Query: 249 LEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCK 308
E+M++ G+ ++ Y L+ GLCK A+ L + P+ G L+ +
Sbjct: 306 FEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSE 365
Query: 309 EGKFSEAVEI----LDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLG---- 360
E + S E+ +D+ K LY + GF +A +FI ++
Sbjct: 366 ESELSRITEVIIGDIDK------KSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESD 419
Query: 361 --------------GISPSRATWSLHVR----------------------------MHNT 378
I P + S+ + M+N
Sbjct: 420 GVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNN 479
Query: 379 VVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDG 438
+++G+C S + +L M+ G+ T +C+ C +R D A +L++M G
Sbjct: 480 IIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYG 539
Query: 439 CVP 441
P
Sbjct: 540 FEP 542
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 10/168 (5%)
Query: 294 PNMVTYGTLINGLCKEGKFS-EAVEI-LDRMRLQGLKPNAGLYGKIISGFCAASSYQDAA 351
PN TY L+ + K S E VE L MR G + ++ +C + A
Sbjct: 175 PNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERAL 234
Query: 352 NFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTF 411
+ +E++ SR H+ +V C +AF+L + R I + T+
Sbjct: 235 SVFNEIL------SRGWLDEHI--STILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTY 286
Query: 412 DCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
LI F K ++KA ++ E+M G D ++DV++GGL K +
Sbjct: 287 CVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDL 334
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 157/312 (50%), Gaps = 16/312 (5%)
Query: 122 SYLTVIDILVEENHVKRAIAFYREM--RKMGIPPSVVSLNILIKALCKNKETIDSALQIF 179
++ ++I VE+ + AI M + + P + +I CK + + AL F
Sbjct: 136 TFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKP-ELALGFF 194
Query: 180 HEMPNRGCQ-PDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQ 238
+ G P+ TY TL++ LC++G V E ++L +E++GF V Y++ IHG +
Sbjct: 195 ESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFK 254
Query: 239 SDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVT 298
L +A+ EM + G+ +V +YS L+DGL K G+ +A+ LL M+ + PN++T
Sbjct: 255 GGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLIT 314
Query: 299 YGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMV 358
Y +I GLCK GK EA + +R+ G++ + LY +I G C + A + + +M
Sbjct: 315 YTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDME 374
Query: 359 LGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCF 418
GI PS T+ NTV+ GLC A ++ ++G+ ++ T+ L+ +
Sbjct: 375 QRGIQPSILTY-------NTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSY 422
Query: 419 CKRGDLNKAARI 430
K +++ I
Sbjct: 423 IKVQNIDAVLEI 434
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 190/397 (47%), Gaps = 25/397 (6%)
Query: 51 TTFGVMISRLVAANQFRSAEGLLERMKQE----NCVVTEDILLTICRGYGRVHRPLDAIR 106
T+ ++S L + L+ R++ E +CV + + GY + +DA+
Sbjct: 208 VTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWI----HGYFKGGALVDALM 263
Query: 107 VFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALC 166
+M + + SY +ID L +E +V+ A+ +M K G+ P++++ +I+ LC
Sbjct: 264 QDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLC 323
Query: 167 KNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSV 226
K + ++ A +F+ + + G + D + Y TLI+G+CR G+++ A + +ME++G PS+
Sbjct: 324 KMGK-LEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSI 382
Query: 227 VTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEM 286
+TY ++I+G+C + + EA +E+ K G+ +V TYSTL+D K + +E+
Sbjct: 383 LTYNTVINGLCMAGRVSEA----DEVSK-GVVGDVITYSTLLDSYIKVQNIDAVLEIRRR 437
Query: 287 MVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASS 346
+ ++V L+ G + EA + M L P+ Y +I G+C
Sbjct: 438 FLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQ 497
Query: 347 YQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISI 406
++A +E+ +S + +N ++ LC A ++ + + +G+ +
Sbjct: 498 IEEALEMFNELRKSSVSAAVC--------YNRIIDALCKKGMLDTATEVLIELWEKGLYL 549
Query: 407 EIDTFDCLIKCF-CKRGDLNKAARI--LEEMISDGCV 440
+I T L+ GD + LE++ SD C+
Sbjct: 550 DIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCL 586
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 145/309 (46%), Gaps = 44/309 (14%)
Query: 127 IDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRG 186
I +L + + AI Y MR+ G+ + S ++K L N ++D+ L + +
Sbjct: 593 ILLLCKRGSFEAAIEVYMIMRRKGLTVTFPS--TILKTLVDNLRSLDAYLLVVNAGETTL 650
Query: 187 CQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAI 246
D Y +INGLC+ G + +A L + + +G + + +TY SLI+G+CQ L EA+
Sbjct: 651 SSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEAL 710
Query: 247 RLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGL 306
RL + ++ G+ P+ TY L+D LCK G L A +LL+ MV+K PN++ Y ++++G
Sbjct: 711 RLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGY 770
Query: 307 CKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSR 366
CK G+ +A+ ++ R + + P+A +I G+C
Sbjct: 771 CKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKG--------------------- 809
Query: 367 ATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNK 426
D A ++ + + IS + F LIK FC +G + +
Sbjct: 810 ---------------------DMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEE 848
Query: 427 AARILEEMI 435
A +L EM+
Sbjct: 849 ARGLLREML 857
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 121/518 (23%), Positives = 202/518 (38%), Gaps = 108/518 (20%)
Query: 33 LMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTIC 92
LM D E G D ++ ++I L A GLL +M +E I
Sbjct: 262 LMQDREMVE--KGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAII 319
Query: 93 RGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIP 152
RG ++ + +A +F+++ ++ + Y+T+ID + + ++ RA + +M + GI
Sbjct: 320 RGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQ 379
Query: 153 PSVVSLNILIKALCK-----------------------------NKETIDSALQIFHEMP 183
PS+++ N +I LC + ID+ L+I
Sbjct: 380 PSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFL 439
Query: 184 NRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLG 243
D L+ MG+ EA L+ M E +P TY ++I G C++ +
Sbjct: 440 EAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIE 499
Query: 244 EAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLI 303
EA+ + E++K+ + V Y+ ++D LCK G A E+L + K ++ T TL+
Sbjct: 500 EALEMFNELRKSSVSAAV-CYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLL 558
Query: 304 -----NG------------------------------LCKEGKFSEAVEILDRMRLQGLK 328
NG LCK G F A+E+ MR +GL
Sbjct: 559 HSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLT 618
Query: 329 ------------------------PNAGL----------YGKIISGFCAASSYQDAANFI 354
NAG Y II+G C A N
Sbjct: 619 VTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALN-- 676
Query: 355 DEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCL 414
L + SR +L+ +N+++ GLC A +L+ S+ G+ T+ L
Sbjct: 677 ----LCSFAKSRGV-TLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGIL 731
Query: 415 IKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGG 452
I CK G A ++L+ M+S G VP+ I++ ++ G
Sbjct: 732 IDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDG 769
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 153/335 (45%), Gaps = 16/335 (4%)
Query: 122 SYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHE 181
+Y T++D ++ ++ + R + IP +V NIL+KA A ++
Sbjct: 414 TYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLL-MGAYGEADALYRA 472
Query: 182 MPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDN 241
MP PD+ TY T+I G C+ G + EA E+FNE+ + S +V Y +I +C+
Sbjct: 473 MPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAV-CYNRIIDALCKKGM 531
Query: 242 LGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGT 301
L A +L E+ + G+ ++ T TL+ + G + L+ + ++ +
Sbjct: 532 LDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLND 591
Query: 302 LINGLCKEGKFSEAVEILDRMRLQGLK---PNAGLYGKIISGFCAASSYQDAANFIDEMV 358
I LCK G F A+E+ MR +GL P+ L + D +D +
Sbjct: 592 AILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTIL-----------KTLVDNLRSLDAYL 640
Query: 359 LGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCF 418
L + S+ V + ++ GLC +A L ++RG+++ T++ LI
Sbjct: 641 LVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGL 700
Query: 419 CKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
C++G L +A R+ + + + G VP + + +++ L
Sbjct: 701 CQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNL 735
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 140/311 (45%), Gaps = 46/311 (14%)
Query: 146 MRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQP--DSYTYGTLINGLCR 203
+R G PS ++ LI + E +D+A+++ M N+ D++ +I+G C+
Sbjct: 125 LRNHGAFPSSLTFCSLIYRFVEKGE-MDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCK 183
Query: 204 MGSVSEAKELFNEMEEKG-FSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVF 262
+G A F + G P++VTYT+L+ +CQ + E L+ ++ G E +
Sbjct: 184 IGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCV 243
Query: 263 TYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRM 322
YS + G KGG + A+ MV K ++V+Y LI+GL KEG EA+
Sbjct: 244 FYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEAL------ 297
Query: 323 RLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQG 382
GL GK M+ G+ P+ T++ +++G
Sbjct: 298 ---------GLLGK--------------------MIKEGVEPNLITYT-------AIIRG 321
Query: 383 LCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPD 442
LC AF L+ + + GI ++ + LI C++G+LN+A +L +M G P
Sbjct: 322 LCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPS 381
Query: 443 KGIWDVVMGGL 453
++ V+ GL
Sbjct: 382 ILTYNTVINGL 392
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 156/378 (41%), Gaps = 86/378 (22%)
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
+A ++ M + L +Y T+I + ++ A+ + E+RK + +V N +I
Sbjct: 465 EADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAV-CYNRII 523
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLI-----NG----------------- 200
ALCK K +D+A ++ E+ +G D +T TL+ NG
Sbjct: 524 DALCK-KGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNS 582
Query: 201 -------------LCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLG--EA 245
LC+ GS A E++ M KG + VT+ S I DNL +A
Sbjct: 583 DVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLT---VTFPSTILKTL-VDNLRSLDA 638
Query: 246 IRLLEEMKKNGIEP-NVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLIN 304
L+ + + +V Y+ +++GLCK G ++A+ L ++ N +TY +LIN
Sbjct: 639 YLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLIN 698
Query: 305 GLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISP 364
GLC++G EA+ + D + GL P+ YG +I C + DA +D MV G+ P
Sbjct: 699 GLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVP 758
Query: 365 SRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDL 424
++ ++N++V G +CK G
Sbjct: 759 -------NIIIYNSIVDG-----------------------------------YCKLGQT 776
Query: 425 NKAARILEEMISDGCVPD 442
A R++ + PD
Sbjct: 777 EDAMRVVSRKMMGRVTPD 794
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 134/314 (42%), Gaps = 32/314 (10%)
Query: 9 WPKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRS 68
+P I +LV+ L + ++ +L+ ++ S+ D + ++I+ L
Sbjct: 621 FPSTILKTLVDNL----RSLDAYLLVVNAGETTLSS---MDVIDYTIIINGLCKEGFLVK 673
Query: 69 AEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVID 128
A L K + ++ G + ++A+R+F +E+ L ++ +Y +ID
Sbjct: 674 ALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILID 733
Query: 129 ILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQ 188
L +E A M G+ P+++ N ++ CK +T D+ + +M R
Sbjct: 734 NLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGR-VT 792
Query: 189 PDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRL 248
PD++T ++I G C+ G + EA +F E ++K S + LI G C + EA L
Sbjct: 793 PDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGL 852
Query: 249 LEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCK 308
L EM + +V +D S++ G L+ LC+
Sbjct: 853 LREML---VSESVVKLINRVDAELAESESIR--------------------GFLVE-LCE 888
Query: 309 EGKFSEAVEILDRM 322
+G+ +A++ILD +
Sbjct: 889 QGRVPQAIKILDEI 902
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 147/319 (46%), Gaps = 7/319 (2%)
Query: 46 FRHDHTTFGVMISRLVAANQFRSAEGLLERMKQE---NCVVTEDILLTICRGYGRVHRPL 102
FRH + +++ ++++ L++ M ++ T ++L+ C G
Sbjct: 148 FRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTC---GEAGLAR 204
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
D + F K + F + + SY ++ L+ K Y +M + G P V++ NI++
Sbjct: 205 DVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVM 264
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF 222
A + +T D ++ EM G PD YTY L++ L A L N M E G
Sbjct: 265 FANFRLGKT-DRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGV 323
Query: 223 SPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAME 282
P V+ +T+LI G+ ++ L ++E K G P+V Y+ ++ G GG +A E
Sbjct: 324 EPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEE 383
Query: 283 LLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFC 342
+ + M K PN+ TY ++I G C GKF EA +L M +G PN +Y +++
Sbjct: 384 MFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLK 443
Query: 343 AASSYQDAANFIDEMVLGG 361
A +A + +MV G
Sbjct: 444 NAGKVLEAHEVVKDMVEKG 462
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 138/324 (42%), Gaps = 8/324 (2%)
Query: 115 QLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDS 174
+ T Y ++ I E K EM K G P + + N+LI C
Sbjct: 147 NFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLI-CTCGEAGLARD 205
Query: 175 ALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIH 234
++ F + +P ++Y +++ L + ++ +M E GF+P V+TY ++
Sbjct: 206 VVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMF 265
Query: 235 GMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRP 294
+ RLL+EM K+G P+++TY+ L+ L G L A+ LL M P
Sbjct: 266 ANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEP 325
Query: 295 NMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFI 354
++ + TLI+GL + GK +D G P+ Y +I+G+ + + A
Sbjct: 326 GVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMF 385
Query: 355 DEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCL 414
EM G P+ T+ N++++G C A L M +RG + + L
Sbjct: 386 KEMTEKGQLPNVFTY-------NSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTL 438
Query: 415 IKCFCKRGDLNKAARILEEMISDG 438
+ G + +A ++++M+ G
Sbjct: 439 VNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 124/256 (48%), Gaps = 7/256 (2%)
Query: 46 FRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENC---VVTEDILLTICRGYGRVHRPL 102
+R ++ ++ L+ Q++ + + E+M ++ V+T +I++ G+ R
Sbjct: 218 YRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDR-- 275
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
R+ +M +Y ++ L N A+ MR++G+ P V+ LI
Sbjct: 276 -LYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLI 334
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF 222
L + + +++ E GC PD Y +I G G + +A+E+F EM EKG
Sbjct: 335 DGLSRAGK-LEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQ 393
Query: 223 SPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAME 282
P+V TY S+I G C + EA LL+EM+ G PN YSTL++ L G L+A E
Sbjct: 394 LPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHE 453
Query: 283 LLEMMVTKHNRPNMVT 298
+++ MV K + ++++
Sbjct: 454 VVKDMVEKGHYVHLIS 469
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 130/283 (45%), Gaps = 7/283 (2%)
Query: 177 QIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGM 236
++ EM G + T+ LI G + E F + + + P +Y +++H +
Sbjct: 173 RLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSL 232
Query: 237 CQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNM 296
+ E+M ++G P+V TY+ +M + G + + LL+ MV P++
Sbjct: 233 LGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDL 292
Query: 297 VTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDE 356
TY L++ L K A+ +L+ MR G++P + +I G A + F+DE
Sbjct: 293 YTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDE 352
Query: 357 MVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIK 416
V G +P +++ ++ G S + +A +++ M +G + T++ +I+
Sbjct: 353 TVKVGCTPDVVCYTV-------MITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIR 405
Query: 417 CFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
FC G +A +L+EM S GC P+ ++ ++ L + KV
Sbjct: 406 GFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKV 448
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 195/435 (44%), Gaps = 51/435 (11%)
Query: 13 ITSSLVEQLIKA-EKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEG 71
+T SLV Q+++ N+A F A ++ G+ H T+ M+ L F
Sbjct: 130 VTESLVLQVLRRFSNGWNQAYGFFIWANSQ--TGYVHSGHTYNAMVDVLGKCRNFDLMWE 187
Query: 72 LLERMK--QENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDI 129
L+ M +E+ +VT D + + R + + A+ F +ME KSY
Sbjct: 188 LVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEME--------KSY------ 233
Query: 130 LVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQP 189
G+ +++N L+ AL K + +I+ A ++F ++ + +P
Sbjct: 234 --------------------GVKTDTIAMNSLMDALVK-ENSIEHAHEVFLKLFD-TIKP 271
Query: 190 DSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLL 249
D+ T+ LI+G C+ +A+ + + M+ F+P VVTYTS + C+ + +L
Sbjct: 272 DARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEML 331
Query: 250 EEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKE 309
EEM++NG PNV TY+ +M L K +A+ + E M P+ Y +LI+ L K
Sbjct: 332 EEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKT 391
Query: 310 GKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVL---GGISPSR 366
G+F +A EI + M QG++ + +Y +IS S + A + M SP+
Sbjct: 392 GRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNV 451
Query: 367 ATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNK 426
T++ ++M + + L M +SI++ T+ LI+ C G + +
Sbjct: 452 ETYAPLLKMCCHKKKMKLLGI-------LLHHMVKNDVSIDVSTYILLIRGLCMSGKVEE 504
Query: 427 AARILEEMISDGCVP 441
A EE + G VP
Sbjct: 505 ACLFFEEAVRKGMVP 519
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 148/300 (49%), Gaps = 12/300 (4%)
Query: 139 AIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLI 198
A+ +R G+ P ++ N L+ A C +D A+++F +M CQPD +TY +I
Sbjct: 281 AVELLDMVRNSGLRPDAITYNTLLSA-CSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMI 339
Query: 199 NGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIE 258
+ R G +EA+ LF E+E KGF P VTY SL++ + N + + ++M+K G
Sbjct: 340 SVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFG 399
Query: 259 PNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNR-PNMVTYGTLINGLCKEGKFSEAVE 317
+ TY+T++ K G A++L + M R P+ +TY LI+ L K + EA
Sbjct: 400 KDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAA 459
Query: 318 ILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHN 377
++ M G+KP Y +I G+ A ++A + M+ G P +S+ M +
Sbjct: 460 LMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSV---MLD 516
Query: 378 TVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRG---DLNKAARILEEM 434
+++G ++ +A+ LY M + G + ++ +I K D+ K R +EE+
Sbjct: 517 VLLRG----NETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEEL 572
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 165/360 (45%), Gaps = 10/360 (2%)
Query: 96 GRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSV 155
GR ++ A+ +F + E Q Y ++ + +A MR+ G P +
Sbjct: 202 GRWNQESLAVEIFTRAEPTVGDRVQ-VYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDL 260
Query: 156 VSLNILIKALCKNKE-TIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELF 214
+S N LI A K+ T + A+++ + N G +PD+ TY TL++ R ++ A ++F
Sbjct: 261 ISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVF 320
Query: 215 NEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKG 274
+ME P + TY ++I + EA RL E++ G P+ TY++L+ +
Sbjct: 321 EDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARE 380
Query: 275 GHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMR-LQGLKPNAGL 333
++ + E+ + M + +TY T+I+ K+G+ A+++ M+ L G P+A
Sbjct: 381 RNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAIT 440
Query: 334 YGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAF 393
Y +I A+ +AA + EM+ GI P+ T+S ++ G A
Sbjct: 441 YTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYS-------ALICGYAKAGKREEAE 493
Query: 394 QLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
+ M G + + ++ + + KA + +MISDG P ++++++ GL
Sbjct: 494 DTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGL 553
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 126/290 (43%), Gaps = 8/290 (2%)
Query: 161 LIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
+I+A K K A + + G PD T+ +L++ + G A+ +FN M
Sbjct: 758 IIEAYGKQK-LWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRD 816
Query: 221 GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQA 280
G SP+V + L+H +C L E ++EE++ G + + + ++D + G+ +
Sbjct: 817 GPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEV 876
Query: 281 MELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISG 340
++ M P + Y +I LCK + +A ++ M K ++ ++
Sbjct: 877 KKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKM 936
Query: 341 FCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMR 400
+ A Y+ + G+ P T +NT++ C + + L MR
Sbjct: 937 YTAIEDYKKTVQVYQRIKETGLEPDETT-------YNTLIIMYCRDRRPEEGYLLMQQMR 989
Query: 401 TRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVM 450
G+ ++DT+ LI F K+ L +A ++ EE++S G D+ + +M
Sbjct: 990 NLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMM 1039
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 152/347 (43%), Gaps = 47/347 (13%)
Query: 137 KRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGT 196
+RA A + M + G P+V S+NIL+ ALC + ++ + E+ + G + +
Sbjct: 804 ERARAIFNTMMRDGPSPTVESINILLHALCVDGR-LEELYVVVEELQDMGFKISKSSILL 862
Query: 197 LINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEA----------- 245
+++ R G++ E K++++ M+ G+ P++ Y +I +C+ + +A
Sbjct: 863 MLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEAN 922
Query: 246 ------------------------IRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAM 281
+++ + +K+ G+EP+ TY+TL+ C+ +
Sbjct: 923 FKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGY 982
Query: 282 ELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGF 341
L++ M P + TY +LI+ K+ +A ++ + + +GLK + Y ++
Sbjct: 983 LLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKIS 1042
Query: 342 CAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRT 401
+ S A + M GI P+ AT MH +V S+ +P+ + LS
Sbjct: 1043 RDSGSDSKAEKLLQMMKNAGIEPTLAT------MHLLMVS--YSSSGNPQEAEKVLS-NL 1093
Query: 402 RGISIEIDT--FDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIW 446
+ +E+ T + +I + + D N L EM +G PD IW
Sbjct: 1094 KDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIW 1140
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 117/302 (38%), Gaps = 34/302 (11%)
Query: 107 VFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALC 166
V +++D K ++ S L ++D ++ Y M+ G P++ ++I+ LC
Sbjct: 844 VVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLC 903
Query: 167 KNKETIDS----------------------------------ALQIFHEMPNRGCQPDSY 192
K K D+ +Q++ + G +PD
Sbjct: 904 KGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDET 963
Query: 193 TYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEM 252
TY TLI CR E L +M G P + TY SLI + L +A +L EE+
Sbjct: 964 TYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEEL 1023
Query: 253 KKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKF 312
G++ + Y T+M G +A +LL+MM P + T L+ G
Sbjct: 1024 LSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNP 1083
Query: 313 SEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLH 372
EA ++L ++ ++ Y +I + + Y + EM G+ P W+
Sbjct: 1084 QEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCF 1143
Query: 373 VR 374
VR
Sbjct: 1144 VR 1145
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 117/270 (43%), Gaps = 36/270 (13%)
Query: 53 FGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKME 112
+ +MI L + R AE ++ M++ N V I ++ + Y + ++V+ +++
Sbjct: 895 YRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIK 954
Query: 113 DFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETI 172
+ L+ + +Y T+I + + + ++MR +G+ P + + LI A K K +
Sbjct: 955 ETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQK-CL 1013
Query: 173 DSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVT---- 228
+ A Q+F E+ ++G + D Y T++ GS S+A++L M+ G P++ T
Sbjct: 1014 EQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLL 1073
Query: 229 -------------------------------YTSLIHGMCQSDNLGEAIRLLEEMKKNGI 257
Y+S+I +S + I L EMKK G+
Sbjct: 1074 MVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGL 1133
Query: 258 EPNVFTYSTLMDGLCKGGHSLQAMELLEMM 287
EP+ ++ + ++ M LL+ +
Sbjct: 1134 EPDHRIWTCFVRAASFSKEKIEVMLLLKAL 1163
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/488 (18%), Positives = 179/488 (36%), Gaps = 81/488 (16%)
Query: 44 NGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLD 103
+G D T+ V+I L AN+ A L+ M T + GY + + +
Sbjct: 432 SGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREE 491
Query: 104 AIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIK 163
A F M K +Y ++D+L+ N ++A YR+M G PS ++I
Sbjct: 492 AEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMIL 551
Query: 164 ALCKNK------------------------------ETIDSALQIFHEMPNRGCQPDSYT 193
L K E D A + G + ++ T
Sbjct: 552 GLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKVAITNGYELENDT 611
Query: 194 YGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLI-------------------- 233
+++ G SEA EL ++E + +LI
Sbjct: 612 LLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYFADP 671
Query: 234 --HGMC---------------QSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGH 276
HG C +++ EA ++ +++ +G E + +++ CK G
Sbjct: 672 CVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGF 731
Query: 277 SLQAMELLEMMVTK-HNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYG 335
A +++ TK + Y +I K+ + +A ++ +R G P+ +
Sbjct: 732 PETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWN 791
Query: 336 KIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQL 395
++S + Y+ A + M+ G SP+ S+++ +H V G R +L
Sbjct: 792 SLMSAYAQCGCYERARAIFNTMMRDGPSPT--VESINILLHALCVDG--------RLEEL 841
Query: 396 YL---SMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGG 452
Y+ ++ G I + ++ F + G++ + +I M + G +P ++ +++
Sbjct: 842 YVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIEL 901
Query: 453 LWDRKKVR 460
L K+VR
Sbjct: 902 LCKGKRVR 909
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 169/365 (46%), Gaps = 11/365 (3%)
Query: 40 AEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVH 99
+E + H + +MI Q++ L+ M+++ + E + + R Y R
Sbjct: 124 SEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVM-RKYARAQ 182
Query: 100 RPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLN 159
+ +AI F+ ME + L ++ ++ L + +V++A + MR P S + +
Sbjct: 183 KVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSK-TYS 241
Query: 160 ILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEE 219
IL++ K + + A ++F EM + GC PD TY +++ LC+ G V EA + M+
Sbjct: 242 ILLEGWGK-EPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDP 300
Query: 220 KGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQ 279
P+ Y+ L+H + L EA+ EM+++G++ +V +++L+ CK
Sbjct: 301 SICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKN 360
Query: 280 AMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIIS 339
+L+ M +K PN + ++ L + G+ EA ++ +M ++ +P+A Y +I
Sbjct: 361 VYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIK 419
Query: 340 GFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSM 399
FC + A M G+ PS T+S+ ++ GLC + +A L M
Sbjct: 420 MFCEKKEMETADKVWKYMRKKGVFPSMHTFSV-------LINGLCEERTTQKACVLLEEM 472
Query: 400 RTRGI 404
GI
Sbjct: 473 IEMGI 477
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 139/284 (48%), Gaps = 9/284 (3%)
Query: 170 ETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTY 229
+ +D A+ F+ M P+ + L++ LC+ +V +A+E+F M ++ F+P TY
Sbjct: 182 QKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTY 240
Query: 230 TSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVT 289
+ L+ G + NL +A + EM G P++ TYS ++D LCK G +A+ ++ M
Sbjct: 241 SILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDP 300
Query: 290 KHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQD 349
+P Y L++ E + EAV+ M G+K + ++ +I FC A+ ++
Sbjct: 301 SICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKN 360
Query: 350 AANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEID 409
+ EM G++P+ + N +++ L + AF ++ M + + D
Sbjct: 361 VYRVLKEMKSKGVTPNSKSC-------NIILRHLIERGEKDEAFDVFRKM-IKVCEPDAD 412
Query: 410 TFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
T+ +IK FC++ ++ A ++ + M G P + V++ GL
Sbjct: 413 TYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGL 456
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 136/289 (47%), Gaps = 12/289 (4%)
Query: 26 KDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENC---V 82
K++ KA +F++ + F D T+ +++ A + M C +
Sbjct: 217 KNVRKAQEVFENM----RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDI 272
Query: 83 VTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAF 142
VT I++ I GRV L +R M+ K T Y ++ EN ++ A+
Sbjct: 273 VTYSIMVDILCKAGRVDEALGIVR---SMDPSICKPTTFIYSVLVHTYGTENRLEEAVDT 329
Query: 143 YREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLC 202
+ EM + G+ V N LI A CK + + ++ EM ++G P+S + ++ L
Sbjct: 330 FLEMERSGMKADVAVFNSLIGAFCKANR-MKNVYRVLKEMKSKGVTPNSKSCNIILRHLI 388
Query: 203 RMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVF 262
G EA ++F +M K P TYT +I C+ + A ++ + M+K G+ P++
Sbjct: 389 ERGEKDEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMH 447
Query: 263 TYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGK 311
T+S L++GLC+ + +A LLE M+ RP+ VT+G L L KE +
Sbjct: 448 TFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEER 496
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 116/264 (43%), Gaps = 43/264 (16%)
Query: 193 TYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEM 252
T+ ++ R V EA FN ME+ P++V + L+ +C+S N+ +A + E M
Sbjct: 170 TFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM 229
Query: 253 KKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKF 312
+ + P+ TYS L++G K + +A E+ M+ P++VTY +++ LCK G+
Sbjct: 230 R-DRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRV 288
Query: 313 SEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLH 372
EA+ I+ M KP +Y ++ + + ++A
Sbjct: 289 DEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEA---------------------- 326
Query: 373 VRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILE 432
VD+ +L M G+ ++ F+ LI FCK + R+L+
Sbjct: 327 --------------VDT------FLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLK 366
Query: 433 EMISDGCVPDKGIWDVVMGGLWDR 456
EM S G P+ ++++ L +R
Sbjct: 367 EMKSKGVTPNSKSCNIILRHLIER 390
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 158/331 (47%), Gaps = 15/331 (4%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
GF+HD T+ M+ L A QF LL+ M ++ C + YGR + +A
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
+ VF++M++ + + +Y T+IDI + + A+ Y+ M++ G+ P + +++I
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINC 473
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
L K + +A ++F EM +GC P+ T+ +I + + A +L+ +M+ GF P
Sbjct: 474 LGKAGH-LPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQP 532
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
VTY+ ++ + L EA + EM++ P+ Y L+D K G+ +A +
Sbjct: 533 DKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWY 592
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIIS----- 339
+ M+ RPN+ T +L++ + + SEA +L M GL P+ Y ++S
Sbjct: 593 QAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDA 652
Query: 340 ------GFCA---ASSYQDAANFIDEMVLGG 361
GFC A S A F+ +M G
Sbjct: 653 RSNFDMGFCGQLMAVSGHPAHMFLLKMPPAG 683
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 144/309 (46%), Gaps = 8/309 (2%)
Query: 133 ENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSY 192
+N+ FY R+ G + ++ L + K+ ++ EM GC+P++
Sbjct: 337 DNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQ-FGEINKLLDEMVRDGCKPNTV 395
Query: 193 TYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEM 252
TY LI+ R + EA +FN+M+E G P VTY +LI ++ L A+ + + M
Sbjct: 396 TYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRM 455
Query: 253 KKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKF 312
++ G+ P+ FTYS +++ L K GH A L MV + PN+VT+ +I K +
Sbjct: 456 QEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNY 515
Query: 313 SEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLH 372
A+++ M+ G +P+ Y ++ ++A EM P + L
Sbjct: 516 ETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLL 575
Query: 373 VRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILE 432
V + G NVD +A+Q Y +M G+ + T + L+ F + +++A +L+
Sbjct: 576 VDL-----WGKAGNVD--KAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQ 628
Query: 433 EMISDGCVP 441
M++ G P
Sbjct: 629 SMLALGLHP 637
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 131/274 (47%), Gaps = 12/274 (4%)
Query: 184 NRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEME-EKGFSPSVVTYTSLIHGMCQSDNL 242
N G + D+Y ++ +M + + A F ++ + GF TYT+++ + ++
Sbjct: 319 NFGFRMDAYQANQVLK---QMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQF 375
Query: 243 GEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTL 302
GE +LL+EM ++G +PN TY+ L+ + + +AM + M P+ VTY TL
Sbjct: 376 GEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTL 435
Query: 303 INGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGI 362
I+ K G A+++ RM+ GL P+ Y II+ A A EMV G
Sbjct: 436 IDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGC 495
Query: 363 SPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRG 422
+P+ T+++ + +H N ++ A +LY M+ G + T+ +++ G
Sbjct: 496 TPNLVTFNIMIALH-----AKARNYET--ALKLYRDMQNAGFQPDKVTYSIVMEVLGHCG 548
Query: 423 DLNKAARILEEMISDGCVPDKGIWDVVMGGLWDR 456
L +A + EM VPD+ ++ +++ LW +
Sbjct: 549 FLEEAEGVFAEMQRKNWVPDEPVYGLLV-DLWGK 581
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 159/330 (48%), Gaps = 11/330 (3%)
Query: 130 LVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQP 189
L+ N + R Y+EM +G +V + N++I + CK + + AL +F+ M G P
Sbjct: 193 LLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFE-ALSVFYRMLKCGVWP 251
Query: 190 DSYTYGTLINGLCRMGSVSEAKELFNE---MEEKGFSPSVVTYTSLIHGMCQSDNLGEAI 246
+ ++ +I+G C+ G + A +L + M SP+ VTY S+I+G C++ L A
Sbjct: 252 NVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAE 311
Query: 247 RLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGL 306
R+ +M K+G++ N TY L+D + G S +A+ L + M +K N V Y +++ L
Sbjct: 312 RIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWL 371
Query: 307 CKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSR 366
EG A+ +L M + ++ + ++ G C ++A F ++ S
Sbjct: 372 FMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQI-------SE 424
Query: 367 ATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNK 426
+ HNT++ + A Q+ SM +G+S++ +F LI + K G L +
Sbjct: 425 KKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLER 484
Query: 427 AARILEEMISDGCVPDKGIWDVVMGGLWDR 456
A I + MI + I++ ++ GL R
Sbjct: 485 ALEIYDGMIKMNKTSNLVIYNSIVNGLSKR 514
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 178/419 (42%), Gaps = 88/419 (21%)
Query: 95 YGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPS 154
+ +V++ +D++ + F L VI +E+ + A++ + M K G+ P+
Sbjct: 202 FWKVYKEMDSLGYVENVNTFNL---------VIYSFCKESKLFEALSVFYRMLKCGVWPN 252
Query: 155 VVSLNILIKALCKNKETIDSALQIFHE---MPNRGCQPDSYTYGTLINGLC--------- 202
VVS N++I CK + + ALQ+ + M P++ TY ++ING C
Sbjct: 253 VVSFNMMIDGACKTGD-MRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAE 311
Query: 203 --------------------------RMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGM 236
R GS EA L +EM KG + V Y S+++ +
Sbjct: 312 RIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWL 371
Query: 237 CQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNM 296
++ A+ +L +M ++ + FT + ++ GLC+ G+ +A+E + K ++
Sbjct: 372 FMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDI 431
Query: 297 VTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDE 356
V + TL++ ++ K + A +IL M +QGL +A +G +I G+ + A D
Sbjct: 432 VCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDG 491
Query: 357 MVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGI------------ 404
M+ + + ++ ++N++V GL + A + +M + I
Sbjct: 492 MI-------KMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIVTYNTLLNESLK 544
Query: 405 ---------------------SIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPD 442
S+ + TF+ +I CK G KA +L+ M+ G VPD
Sbjct: 545 TGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPD 603
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 180/417 (43%), Gaps = 21/417 (5%)
Query: 51 TTFGVMISRLVAANQFRSAEGLLERMK-------QENCVVTEDILLTICRGYGRVHRPLD 103
+F +MI R A LL +M N V ++ C+ GR+
Sbjct: 254 VSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKA-GRLDL--- 309
Query: 104 AIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIK 163
A R+ M + +++Y ++D A+ EM G+ + V N ++
Sbjct: 310 AERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVY 369
Query: 164 ALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFS 223
L + I+ A+ + +M ++ Q D +T ++ GLCR G V EA E ++ EK
Sbjct: 370 WLFMEGD-IEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLV 428
Query: 224 PSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMEL 283
+V + +L+H + L A ++L M G+ + ++ TL+DG K G +A+E+
Sbjct: 429 EDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEI 488
Query: 284 LEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCA 343
+ M+ + N+V Y +++NGL K G A +++ M ++ + Y +++
Sbjct: 489 YDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIVT----YNTLLNESLK 544
Query: 344 ASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRG 403
+ ++A + + +M S+ + N ++ LC +A ++ M RG
Sbjct: 545 TGNVEEADDILSKM-----QKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERG 599
Query: 404 ISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKVR 460
+ + T+ LI F K K + + +I G P + I+ ++ L DR+ R
Sbjct: 600 VVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRPLLDRENGR 656
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 135/302 (44%), Gaps = 13/302 (4%)
Query: 144 REMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCR 203
R + G P V + L++A +N + A ++ + G + + L
Sbjct: 139 RSYQACGSSPDV--FDSLVRACTQNGDA-QGAYEVIEQTRAEGFCVSVHALNNFMGCLLN 195
Query: 204 MGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFT 263
+ + +++ EM+ G+ +V T+ +I+ C+ L EA+ + M K G+ PNV +
Sbjct: 196 VNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVS 255
Query: 264 YSTLMDGLCKGGHSLQAMELL---EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILD 320
++ ++DG CK G A++LL MM PN VTY ++ING CK G+ A I
Sbjct: 256 FNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRG 315
Query: 321 RMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVV 380
M G+ N YG ++ + A S +A DEM G+ ++ ++N++V
Sbjct: 316 DMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGL-------VVNTVIYNSIV 368
Query: 381 QGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCV 440
L D A + M ++ + I+ T +++ C+ G + +A ++ V
Sbjct: 369 YWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLV 428
Query: 441 PD 442
D
Sbjct: 429 ED 430
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 131/271 (48%), Gaps = 2/271 (0%)
Query: 106 RVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRK-MGIPPSVVSLNILIKA 164
++ +M+D L + ++ +I+ + HV +A+ + + K +G +V N L+ A
Sbjct: 132 KILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHA 191
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
LC K A + M +G +PD TY L+NG C G + EA+E +EM +GF+P
Sbjct: 192 LCDVK-MFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNP 250
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
LI G+ + L A ++ +M K G P++ T++ L++ + K G +E+
Sbjct: 251 PARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMY 310
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAA 344
++ TY TLI + K GK EA +L+ G KP LY II G C
Sbjct: 311 YTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRN 370
Query: 345 SSYQDAANFIDEMVLGGISPSRATWSLHVRM 375
+ DA +F +M + P+R +++ + M
Sbjct: 371 GMFDDAFSFFSDMKVKAHPPNRPVYTMLITM 401
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 154/355 (43%), Gaps = 17/355 (4%)
Query: 104 AIRVFHKMEDFQLK---FTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNI 160
IR F+ +E Q T+ Y I+ +V N V+R I R + + +P V+
Sbjct: 25 TIRHFNSLEPLQSSDSTPTKGDYFAAINHVV--NIVRREIHPERSLNSLRLP---VTSEF 79
Query: 161 LIKALCKNKETIDSALQIFH-EMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEE 219
+ + L + + +L+ F+ N P S Y L L ++ +M++
Sbjct: 80 VFRVLRATSRSSNDSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKD 139
Query: 220 KGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKN-GIEPNVFTYSTLMDGLCKGGHSL 278
S T +I ++ ++ +A+ L + K G + V Y++L+ LC
Sbjct: 140 LSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFH 199
Query: 279 QAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKII 338
A L+ M+ K +P+ TY L+NG C GK EA E LD M +G P A +I
Sbjct: 200 GAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLI 259
Query: 339 SGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLS 398
G A + A + +M GG P T+ N +++ + + + ++Y +
Sbjct: 260 EGLLNAGYLESAKEMVSKMTKGGFVPDIQTF-------NILIEAISKSGEVEFCIEMYYT 312
Query: 399 MRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
G+ ++IDT+ LI K G +++A R+L + DG P ++ ++ G+
Sbjct: 313 ACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGM 367
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 151/375 (40%), Gaps = 40/375 (10%)
Query: 4 RTLFKWPKQITSSLVEQLIKA-EKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVA 62
R+L +TS V ++++A + N ++ F+ A + S + + + L +
Sbjct: 66 RSLNSLRLPVTSEFVFRVLRATSRSSNDSLRFFNWARSNPS--YTPTSMEYEELAKSLAS 123
Query: 63 ANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKM-EDFQLKFTQK 121
++ S +L++MK + ++ + L I YG+ A+ +F+ + + + T
Sbjct: 124 HKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVD 183
Query: 122 SYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHE 181
Y +++ L + A A R M + G+ P + IL+ C + + A + E
Sbjct: 184 VYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGK-MKEAQEFLDE 242
Query: 182 MPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSD- 240
M RG P + LI GL G + AKE+ ++M + GF P + T+ LI + +S
Sbjct: 243 MSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGE 302
Query: 241 ----------------------------------NLGEAIRLLEEMKKNGIEPNVFTYST 266
+ EA RLL ++G +P Y+
Sbjct: 303 VEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAP 362
Query: 267 LMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQG 326
++ G+C+ G A M K + PN Y LI + GKF +A L M G
Sbjct: 363 IIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMG 422
Query: 327 LKPNAGLYGKIISGF 341
L P + + + G
Sbjct: 423 LVPISRCFDMVTDGL 437
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 127/302 (42%), Gaps = 4/302 (1%)
Query: 17 LVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERM 76
++EQ K +++AV +F+ + G + + ++ L F A L+ RM
Sbjct: 152 IIEQYGK-NGHVDQAVELFNGVPK--TLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRM 208
Query: 77 KQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHV 136
++ + + G+ + +A +M + +I+ L+ ++
Sbjct: 209 IRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYL 268
Query: 137 KRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGT 196
+ A +M K G P + + NILI+A+ K+ E ++ +++++ G D TY T
Sbjct: 269 ESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGE-VEFCIEMYYTACKLGLCVDIDTYKT 327
Query: 197 LINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNG 256
LI + ++G + EA L N E G P Y +I GMC++ +A +MK
Sbjct: 328 LIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKA 387
Query: 257 IEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAV 316
PN Y+ L+ +GG + A L M P + + +GL GK A+
Sbjct: 388 HPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAM 447
Query: 317 EI 318
I
Sbjct: 448 RI 449
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 107/247 (43%), Gaps = 7/247 (2%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENC---VVTEDILLTICRGYGRVHRP 101
G + D T+ ++++ +A + + A+ L+ M + D+L+ G +
Sbjct: 212 GLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLE-- 269
Query: 102 LDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNIL 161
A + KM +++ +I+ + + V+ I Y K+G+ + + L
Sbjct: 270 -SAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTL 328
Query: 162 IKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKG 221
I A+ K + ID A ++ + G +P Y +I G+CR G +A F++M+ K
Sbjct: 329 IPAVSKIGK-IDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKA 387
Query: 222 FSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAM 281
P+ YT LI + +A L EM + G+ P + + DGL GG AM
Sbjct: 388 HPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAM 447
Query: 282 ELLEMMV 288
+ ++ V
Sbjct: 448 RIEQLEV 454
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 113/474 (23%), Positives = 195/474 (41%), Gaps = 63/474 (13%)
Query: 44 NGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENC--------------VVTEDILL 89
NG DH T+ V++ L ++ + A +L+ + C V E +L
Sbjct: 407 NGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLG 466
Query: 90 TICR--------GYGRVHRPL-------DAIRVFHKMEDFQLKFTQKSYLTVIDILVEEN 134
I R G V L A+ KM + SY +VI L +EN
Sbjct: 467 EIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQEN 526
Query: 135 HVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTY 194
++ + ++++ P V + I++ LCK + D+A I M G +P Y
Sbjct: 527 IIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDR-DAAFAIIDAMEELGLRPTVAIY 585
Query: 195 GTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKK 254
++I L + G V EA+E F +M E G P + Y +I+ ++ + EA L+EE+ K
Sbjct: 586 SSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVK 645
Query: 255 NGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSE 314
+ + P+ FTY+ L+ G K G + + L+ M+ PN+V Y LI K+G F
Sbjct: 646 HFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKF 705
Query: 315 AVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDE------------------ 356
+ + M +K + Y ++SG A + + I E
Sbjct: 706 SFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVS 765
Query: 357 ------------MVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGI 404
+ I + + ++ +HNT++ G C+ A+ SM+ GI
Sbjct: 766 IPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGI 825
Query: 405 SIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKK 458
+ T+ L+K + GD+ A + E C PD+ ++ ++ GL D K+
Sbjct: 826 VPNLVTYTILMKSHIEAGDIESAIDLFE---GTNCEPDQVMYSTLLKGLCDFKR 876
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 163/378 (43%), Gaps = 11/378 (2%)
Query: 1 MGSRTLFKWPKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRL 60
+G R L +++ + ++I I++A L+ D A NG D + +G +I +L
Sbjct: 53 LGRRGLLDSAREV----IRRVIDGSSSISEAALVADFAV---DNGIELDSSCYGALIRKL 105
Query: 61 VAANQFRSAEGLLERMKQENCVVTED-ILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFT 119
Q AE + N +V + +L ++ ++ R +A ++ +
Sbjct: 106 TEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPS 165
Query: 120 QKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIF 179
+ S V+D L ++ A + ++++ G + L K LC + ++ A+ +
Sbjct: 166 RNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGH-LNEAIGML 224
Query: 180 HEMPNRGCQPDSYT-YGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQ 238
+ P Y +L C+ G +EA+ LF+ ME G+ V YT L+ C+
Sbjct: 225 DTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCK 284
Query: 239 SDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVT 298
+N+ A+RL M + E + ++TL+ G K G + + M+ K + N+ T
Sbjct: 285 DNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFT 344
Query: 299 YGTLINGLCKEGKFSEAVEI-LDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEM 357
Y +I CKEG A+ + ++ + + N Y +I GF A + + M
Sbjct: 345 YHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRM 404
Query: 358 VLGGISPSRATWSLHVRM 375
+ GI P T+ + ++M
Sbjct: 405 LDNGIVPDHITYFVLLKM 422
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/431 (20%), Positives = 172/431 (39%), Gaps = 50/431 (11%)
Query: 46 FRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAI 105
F D T+ ++++ L N +A +++ M++ T I +I G+ R ++A
Sbjct: 543 FVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAE 602
Query: 106 RVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKAL 165
F KM + ++ + +Y+ +I+ + A E+ K + PS + +LI
Sbjct: 603 ETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGF 662
Query: 166 CKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPS 225
K ++ Q +M G P+ Y LI + G + LF M E
Sbjct: 663 VK-MGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHD 721
Query: 226 VVTYTSLIHGMCQS--------------------------------DNLGE------AIR 247
+ Y +L+ G+ ++ +LG A+
Sbjct: 722 HIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAME 781
Query: 248 LLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLC 307
++ ++KK+ I PN++ ++T++ G C G +A LE M + PN+VTY L+
Sbjct: 782 VIGKVKKS-IIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHI 840
Query: 308 KEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRA 367
+ G A+++ + + P+ +Y ++ G C DA + EM GI+P++
Sbjct: 841 EAGDIESAIDLFEGTNCE---PDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKD 897
Query: 368 TWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKA 427
++ ++Q LC + + A ++ M I LI C+ L +A
Sbjct: 898 SYE-------KLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREA 950
Query: 428 ARILEEMISDG 438
+ M+ G
Sbjct: 951 RALFAIMVQSG 961
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 149/373 (39%), Gaps = 42/373 (11%)
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREM--RKMGIPPSVVSLNI 160
+A +F ME + Y ++ ++N++ A+ Y M R + P + N
Sbjct: 255 EAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCI--FNT 312
Query: 161 LIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELF-NEMEE 219
LI K +D +F +M +G Q + +TY +I C+ G+V A LF N
Sbjct: 313 LIHGFMK-LGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGS 371
Query: 220 KGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQ 279
+ S +V YT+LI G + + +A+ LL M NGI P+ TY L+ L K
Sbjct: 372 EDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKY 431
Query: 280 AMELLEMMVTKH---NRP------------------------NMVTYGTLI--NGLCKEG 310
AM +L+ ++ N P N+ G + LC +
Sbjct: 432 AMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQR 491
Query: 311 KFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWS 370
+ A+ +++M G P Y +I + +D A+ ++ + P T+
Sbjct: 492 NYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYL 551
Query: 371 LHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARI 430
+ VV LC D AF + +M G+ + + +I K+G + +A
Sbjct: 552 I-------VVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEET 604
Query: 431 LEEMISDGCVPDK 443
+M+ G PD+
Sbjct: 605 FAKMLESGIQPDE 617
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 133/320 (41%), Gaps = 12/320 (3%)
Query: 134 NHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYT 193
+H R ++ ++ + G+ S + I+ + +I A + + G + DS
Sbjct: 41 DHRSRCLSLIVKLGRRGLLDSAREV---IRRVIDGSSSISEAALVADFAVDNGIELDSSC 97
Query: 194 YGTLINGLCRMGSVSEAKELFNE-MEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEM 252
YG LI L MG A+ +N+ + G P S++ + + EA L+ +
Sbjct: 98 YGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRI 157
Query: 253 KKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKF 312
+G P+ + S ++D LC L+A E + + + + L GLC G
Sbjct: 158 IASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHL 217
Query: 313 SEAVEILDRM-RLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSL 371
+EA+ +LD + + + LY + FC +A D M + G +
Sbjct: 218 NEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKV---- 273
Query: 372 HVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARIL 431
M+ +++ C + + A +LYL M R ++ F+ LI F K G L+K +
Sbjct: 274 ---MYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMF 330
Query: 432 EEMISDGCVPDKGIWDVVMG 451
+MI G + + +++G
Sbjct: 331 SQMIKKGVQSNVFTYHIMIG 350
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 86/189 (45%), Gaps = 3/189 (1%)
Query: 189 PDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRL 248
P+ Y + T+I G C G + EA M+++G P++VTYT L+ ++ ++ AI L
Sbjct: 792 PNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDL 851
Query: 249 LEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCK 308
E EP+ YSTL+ GLC L A+ L+ M PN +Y L+ LC
Sbjct: 852 FE---GTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCY 908
Query: 309 EGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRAT 368
EAV+++ M + P + + +I C ++A MV G S T
Sbjct: 909 SRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSGRSLLNCT 968
Query: 369 WSLHVRMHN 377
++M N
Sbjct: 969 KPGLLKMLN 977
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 125/310 (40%), Gaps = 46/310 (14%)
Query: 154 SVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKEL 213
+ V L ++ ALC + I +AL +M N GC P ++Y ++I L + + + L
Sbjct: 476 AAVGLAVVTTALCSQRNYI-AALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASL 534
Query: 214 FNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCK 273
N ++E F P+V TY +++ LCK
Sbjct: 535 VNIIQELDFV-----------------------------------PDVDTYLIVVNELCK 559
Query: 274 GGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGL 333
A +++ M RP + Y ++I L K+G+ EA E +M G++P+
Sbjct: 560 KNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIA 619
Query: 334 YGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAF 393
Y +I+ + +A ++E+V + PS T+++ ++ G +
Sbjct: 620 YMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTV-------LISGFVKMGMMEKGC 672
Query: 394 QLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
Q M G+S + + LI F K+GD + + M + D + ++ GL
Sbjct: 673 QYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGL 732
Query: 454 W---DRKKVR 460
W RKK R
Sbjct: 733 WRAMARKKKR 742
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 116/256 (45%), Gaps = 24/256 (9%)
Query: 44 NGFRHDHTTFGVMIS---RLVAANQFRSA------EGLLERMKQENCVVTEDILLTICRG 94
N +HDH + ++S R +A + R E LL+R+ + L++I
Sbjct: 716 NDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRL------IRTKPLVSIPSS 769
Query: 95 YGRVHRPLDAIRVFHKMEDFQLKFTQKSYL--TVIDILVEENHVKRAIAFYREMRKMGIP 152
G A+ V K++ YL T+I + A M+K GI
Sbjct: 770 LGNYGSKSFAMEVIGKVKK---SIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIV 826
Query: 153 PSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKE 212
P++V+ IL+K+ + + I+SA+ +F C+PD Y TL+ GLC +A
Sbjct: 827 PNLVTYTILMKSHIEAGD-IESAIDLFE---GTNCEPDQVMYSTLLKGLCDFKRPLDALA 882
Query: 213 LFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLC 272
L EM++ G +P+ +Y L+ +C S EA++++++M I P ++ L+ LC
Sbjct: 883 LMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILC 942
Query: 273 KGGHSLQAMELLEMMV 288
+ +A L +MV
Sbjct: 943 EEKKLREARALFAIMV 958
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 10/190 (5%)
Query: 56 MISRLVAANQFRSAEGLLERMKQENCV---VTEDILLTICRGYGRVHRPLDAIRVFHKME 112
+I+ AA + A LE M++E V VT IL+ G + +D E
Sbjct: 800 IITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLF------E 853
Query: 113 DFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETI 172
+ Q Y T++ L + A+A EM+K GI P+ S L++ LC ++ T+
Sbjct: 854 GTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTM 913
Query: 173 DSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSL 232
+ A+++ +M P S + LI LC + EA+ LF M + G S T L
Sbjct: 914 E-AVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSGRSLLNCTKPGL 972
Query: 233 IHGMCQSDNL 242
+ + Q+ L
Sbjct: 973 LKMLNQNQQL 982
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 195/429 (45%), Gaps = 34/429 (7%)
Query: 17 LVEQLIKAEKDINKAVLMFDSATAE--YSNGFRHDHTTFGVMISRLVAANQFRSAEGLLE 74
+VE L + D A F A + Y R H+ MIS L +F +A L++
Sbjct: 130 VVEILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHS----MISILGKMRKFDTAWTLID 185
Query: 75 RMKQ-ENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEE 133
M++ +V LL + R Y VH AI FH + F+L+ + +++ L
Sbjct: 186 EMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRY 245
Query: 134 NHVKRA--IAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDS 191
+V A + F K P S NI++ C + A +++ EM N G + D
Sbjct: 246 KNVSDAGHLIF---CNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDV 302
Query: 192 YTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEE 251
+Y ++I+ + GS+++ +LF+ M+++ P Y +++H + ++ + EA L++
Sbjct: 303 VSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKT 362
Query: 252 M-KKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEG 310
M ++ GIEPNV TY++L+ LCK + +A ++ + M+ K P + TY + L + G
Sbjct: 363 MEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL-RTG 421
Query: 311 KFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWS 370
+ E E+L +MR G +P Y +I C + + DEM + P +++
Sbjct: 422 E--EVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYI 479
Query: 371 LHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFC----------- 419
+ ++ GL N A+ Y M+ +G+ + D + F
Sbjct: 480 V-------MIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWFSGKQYAEQRITD 532
Query: 420 KRGDLNKAA 428
+G++NK A
Sbjct: 533 SKGEVNKGA 541
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 158/344 (45%), Gaps = 19/344 (5%)
Query: 121 KSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVV---SLNILIKALCKNKETIDSALQ 177
+ Y ++I IL + A EMRK PS+V +L I+I+ C + + A+
Sbjct: 162 REYHSMISILGKMRKFDTAWTLIDEMRKFS--PSLVNSQTLLIMIRKYCAVHD-VGKAIN 218
Query: 178 IFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMC 237
FH + + +L++ LCR +VS+A L ++K + ++ +++G C
Sbjct: 219 TFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDK-YPFDAKSFNIVLNGWC 277
Query: 238 QS-DNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNM 296
+ EA R+ EM G++ +V +YS+++ KGG + ++L + M + P+
Sbjct: 278 NVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDR 337
Query: 297 VTYGTLINGLCKEGKFSEAVEILDRMRLQ-GLKPNAGLYGKIISGFCAASSYQDAANFID 355
Y +++ L K SEA ++ M + G++PN Y +I C A ++A D
Sbjct: 338 KVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFD 397
Query: 356 EMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLI 415
EM+ G+ P+ T+ +R+ T F+L MR G ++T+ LI
Sbjct: 398 EMLEKGLFPTIRTYHAFMRILRT----------GEEVFELLAKMRKMGCEPTVETYIMLI 447
Query: 416 KCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
+ C+ D + + +EM PD + V++ GL+ K+
Sbjct: 448 RKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKI 491
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 109/250 (43%), Gaps = 15/250 (6%)
Query: 208 SEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTL 267
S+ KEL N++EE PS ++ + ++D + K+ G +V Y ++
Sbjct: 109 SDRKELRNKLEECDVKPSNELVVEILSRV-RNDWETAFTFFVWAGKQQGYVRSVREYHSM 167
Query: 268 MDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTL---INGLCKEGKFSEAVEILDRMRL 324
+ L K A L++ M + P++V TL I C +A+ +
Sbjct: 168 ISILGKMRKFDTAWTLIDEM--RKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKR 225
Query: 325 QGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLC 384
L+ + ++S C + DA + I ++ + + N V+ G C
Sbjct: 226 FKLEMGIDDFQSLLSALCRYKNVSDAGHLI--------FCNKDKYPFDAKSFNIVLNGWC 277
Query: 385 SNVDSPR-AFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDK 443
+ + SPR A ++++ M G+ ++ ++ +I C+ K G LNK ++ + M + PD+
Sbjct: 278 NVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDR 337
Query: 444 GIWDVVMGGL 453
+++ V+ L
Sbjct: 338 KVYNAVVHAL 347
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 165/317 (52%), Gaps = 16/317 (5%)
Query: 5 TLFKWPKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAAN 64
T+ K P + T + I E+D +F+ A+ + F H++ ++ + I +L AA
Sbjct: 129 TISKLPPRFTPEELADAITLEEDPFLCFHLFNWASQQ--PRFTHENCSYHIAIRKLGAAK 186
Query: 65 QFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKM---EDFQLKFTQK 121
++ + ++ ++ + E++ +I + + + + A+ +F M ++ + + T +
Sbjct: 187 MYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIR 246
Query: 122 SYLTVIDILVEE------NHV--KRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETID 173
+Y + L+ NHV + + +R+M GI P V +LN L+K + ++
Sbjct: 247 TYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLH-VN 305
Query: 174 SALQIFHEMPN-RGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSL 232
AL+IFH+M C+P+S+TY LI+GLC G A+EL +EM+ KGF P+ +Y SL
Sbjct: 306 DALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSL 365
Query: 233 IHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHN 292
++ S + +A++ L EM +NG + +Y TL+D C+ G +A LLEM+ K
Sbjct: 366 VNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQ- 424
Query: 293 RPNMVTYGTLINGLCKE 309
+ +Y L+N L K+
Sbjct: 425 LVDRDSYDKLVNVLHKD 441
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 123/271 (45%), Gaps = 30/271 (11%)
Query: 75 RMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKF-------TQKSYLTVI 127
R ENC Y R L A +++ +M+D + + Y ++I
Sbjct: 167 RFTHENC------------SYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSII 214
Query: 128 DILVEENHVKRAIAFYREM---RKMGIPPSVVSLNILIKALCK-------NKETIDSALQ 177
+ + RA+ +R M + + P++ + +IL KAL N +++
Sbjct: 215 FYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRS 274
Query: 178 IFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEE-KGFSPSVVTYTSLIHGM 236
+F +M + G +PD + L+ G V++A +F++M P+ TY LIHG+
Sbjct: 275 LFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGL 334
Query: 237 CQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNM 296
C A LL EMK G PN +Y++L++ G A++ L M+ +
Sbjct: 335 CAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDF 394
Query: 297 VTYGTLINGLCKEGKFSEAVEILDRMRLQGL 327
++Y TL++ C++GK+ EA +L+ +R + L
Sbjct: 395 ISYRTLVDESCRKGKYDEATRLLEMLREKQL 425
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 85/193 (44%), Gaps = 12/193 (6%)
Query: 175 ALQIFHEM---PNRGCQPDSYTYGTLINGLCRMGSVS--------EAKELFNEMEEKGFS 223
A+ IF M N C+P TY L L G+ S + LF +M + G
Sbjct: 226 AVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIE 285
Query: 224 PSVVTYTSLIHGMCQSDNLGEAIRLLEEMKK-NGIEPNVFTYSTLMDGLCKGGHSLQAME 282
P V L+ G S ++ +A+R+ +M EPN FTY L+ GLC G ++ A E
Sbjct: 286 PDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARE 345
Query: 283 LLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFC 342
LL M K PN +Y +L+N G+ +AV+ L M G + Y ++ C
Sbjct: 346 LLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESC 405
Query: 343 AASSYQDAANFID 355
Y +A ++
Sbjct: 406 RKGKYDEATRLLE 418
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 12/180 (6%)
Query: 194 YGTLINGLCRMGSVSEAKELFNEM-EEKGFS--PSVVTYTSLIHGMCQSDNLG------- 243
Y ++I + G + A +F M K P++ TY L + N
Sbjct: 210 YNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYM 269
Query: 244 EAIR-LLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHN-RPNMVTYGT 301
E +R L +M +GIEP+VF + L+ G H A+ + M ++ PN TY
Sbjct: 270 ETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDY 329
Query: 302 LINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGG 361
LI+GLC +G+ A E+L M+ +G PN Y +++ F + DA + EM+ G
Sbjct: 330 LIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENG 389
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 155/321 (48%), Gaps = 11/321 (3%)
Query: 127 IDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRG 186
+D V ++V+RAI + E G+ S S N L++ LC+ + + +A +F+ +G
Sbjct: 193 MDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCE-RSHVSAAKSVFN--AKKG 249
Query: 187 CQP-DSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEA 245
P DS +Y +I+G ++G V E +++ EM E GF P ++Y+ LI G+ ++ + ++
Sbjct: 250 NIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDS 309
Query: 246 IRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING 305
+ + + +K G P+ Y+ ++ ++M M+ + PN+ TY L++G
Sbjct: 310 VEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSG 369
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPS 365
L K K S+A+EI + M +G+ P GL + C+ A + G S
Sbjct: 370 LIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRIS 429
Query: 366 RATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLN 425
+ + L ++ + G C + ++ M+ G +++ ++ ++ C G L
Sbjct: 430 ESAYKLLLKRLSRF--GKCGML-----LNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLE 482
Query: 426 KAARILEEMISDGCVPDKGIW 446
A ++EE + G P++ ++
Sbjct: 483 NAVLVMEEAMRKGFCPNRFVY 503
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 154/353 (43%), Gaps = 11/353 (3%)
Query: 32 VLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTI 91
V FD A E G D ++ V++ L F +L+ M E + L
Sbjct: 135 VTFFDWAVRE--PGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIA 192
Query: 92 CRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGI 151
+ RVH AI +F + E F +K + +S+ ++ L E +HV A + + +K I
Sbjct: 193 MDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVF-NAKKGNI 251
Query: 152 PPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAK 211
P S NI+I K E ++ ++ EM G PD +Y LI GL R G ++++
Sbjct: 252 PFDSCSYNIMISGWSKLGE-VEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSV 310
Query: 212 ELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGL 271
E+F+ ++ KG P Y ++I + + E++R M EPN+ TYS L+ GL
Sbjct: 311 EIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGL 370
Query: 272 CKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNA 331
KG A+E+ E M+++ P + + LC G A+ I + R G + +
Sbjct: 371 IKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISE 430
Query: 332 GLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLC 384
Y ++ N DEM G PS V ++ +V GLC
Sbjct: 431 SAYKLLLKRLSRFGKCGMLLNVWDEMQESGY-PS------DVEVYEYIVDGLC 476
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 137/305 (44%), Gaps = 11/305 (3%)
Query: 150 GIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSE 209
G+ P + L I + + + + A+++F E + G + + ++ L+ LC VS
Sbjct: 181 GVNPDLECLTIAMDSFVR-VHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSA 239
Query: 210 AKELFNEMEEKGFSP-SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLM 268
AK +FN +KG P +Y +I G + + E ++L+EM ++G P+ +YS L+
Sbjct: 240 AKSVFNA--KKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLI 297
Query: 269 DGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLK 328
+GL + G ++E+ + + K N P+ Y +I F E++ RM + +
Sbjct: 298 EGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECE 357
Query: 329 PNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVD 388
PN Y K++SG DA +EM+ G+ P+ + + ++ LCS
Sbjct: 358 PNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTG-------LVTSFLKPLCSYGP 410
Query: 389 SPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDV 448
A +Y R G I + L+K + G + +EM G D +++
Sbjct: 411 PHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEY 470
Query: 449 VMGGL 453
++ GL
Sbjct: 471 IVDGL 475
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 124/287 (43%), Gaps = 9/287 (3%)
Query: 49 DHTTFGVMISRLVAANQFRSAEGLLERMKQE----NCVVTEDILLTICRGYGRVHRPLDA 104
D ++ +MIS + E +L+ M + +C+ ++ G GR R D+
Sbjct: 254 DSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLI----EGLGRTGRINDS 309
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
+ +F ++ Y +I + ++ +YR M P++ + + L+
Sbjct: 310 VEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSG 369
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
L K ++ D AL+IF EM +RG P + + + LC G A ++ + + G
Sbjct: 370 LIKGRKVSD-ALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRI 428
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
S Y L+ + + G + + +EM+++G +V Y ++DGLC GH A+ ++
Sbjct: 429 SESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVM 488
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNA 331
E + K PN Y L + L K A ++ +++ NA
Sbjct: 489 EEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKARATENA 535
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/243 (17%), Positives = 108/243 (44%), Gaps = 8/243 (3%)
Query: 217 MEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGH 276
+ E G + V +Y+ ++ + + + +L+ M G+ P++ + MD + +
Sbjct: 142 VREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHY 201
Query: 277 SLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGK 336
+A+EL E + + + ++ L+ LC+ S A + + + + ++ Y
Sbjct: 202 VRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKK-GNIPFDSCSYNI 260
Query: 337 IISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLY 396
+ISG+ ++ + EMV G P ++S +++GL + +++
Sbjct: 261 MISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYS-------HLIEGLGRTGRINDSVEIF 313
Query: 397 LSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDR 456
+++ +G + + ++ +I F D +++ R M+ + C P+ + ++ GL
Sbjct: 314 DNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKG 373
Query: 457 KKV 459
+KV
Sbjct: 374 RKV 376
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 164/331 (49%), Gaps = 11/331 (3%)
Query: 127 IDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRG 186
++ L + +++RA + ++G+ P V++ N LIK + ID A + M G
Sbjct: 20 VNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFI-GIDEAYAVTRRMREAG 78
Query: 187 CQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAI 246
+PD TY +LI+G + ++ +LF+EM G SP + +Y +L+ + GEA
Sbjct: 79 IEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAF 138
Query: 247 RLL-EEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING 305
++L E++ G+ P + TY+ L+D LCK GH+ A+EL + + ++ +P ++TY LING
Sbjct: 139 KILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILING 197
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPS 365
LCK + ++ ++ G PNA Y ++ + + +M
Sbjct: 198 LCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKM-------K 250
Query: 366 RATWSLHVRMHNTVVQGLCSNVDSPRAFQ-LYLSMRTRGISIEIDTFDCLIKCFCKRGDL 424
+ ++ + VV L + A++ ++ +R+ S +I +++ L+ + K G+L
Sbjct: 251 KEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNL 310
Query: 425 NKAARILEEMISDGCVPDKGIWDVVMGGLWD 455
+ +LEE+ G PD +++ GL +
Sbjct: 311 DAVDDLLEEIEMKGLKPDDYTHTIIVNGLLN 341
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 151/291 (51%), Gaps = 14/291 (4%)
Query: 142 FYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGL 201
+ ++ G+ P + + NIL+ ALCK+ T D+A+++F + +R +P+ TY LINGL
Sbjct: 141 LHEDIHLAGLVPGIDTYNILLDALCKSGHT-DNAIELFKHLKSR-VKPELMTYNILINGL 198
Query: 202 CRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNV 261
C+ V + E+++ G++P+ VTYT+++ ++ + + ++L +MKK G +
Sbjct: 199 CKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDG 258
Query: 262 FTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRP-NMVTYGTLINGLCKEGKFSEAVEILD 320
F ++ L K G + +A E + +V R ++V+Y TL+N K+G ++L+
Sbjct: 259 FANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLE 318
Query: 321 RMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVV 380
+ ++GLKP+ + I++G + A + + G+ PS T N ++
Sbjct: 319 EIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTC-------NCLI 371
Query: 381 QGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARIL 431
GLC RA +L+ SM R + T+ ++ CK G L A+++L
Sbjct: 372 DGLCKAGHVDRAMRLFASMEVR----DEFTYTSVVHNLCKDGRLVCASKLL 418
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 118/230 (51%), Gaps = 6/230 (2%)
Query: 122 SYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHE 181
+Y T++ + + +++ + + +M+K G + ++ AL K + A + HE
Sbjct: 225 TYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRA-EEAYECMHE 283
Query: 182 MPNRGCQP-DSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSD 240
+ G + D +Y TL+N + G++ +L E+E KG P T+T +++G+
Sbjct: 284 LVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIG 343
Query: 241 NLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYG 300
N G A + L + + G++P+V T + L+DGLCK GH +AM L M + + TY
Sbjct: 344 NTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR----DEFTYT 399
Query: 301 TLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDA 350
++++ LCK+G+ A ++L +G+K + ++SG SYQ A
Sbjct: 400 SVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSARRAVLSGIRETVSYQAA 449
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 149/303 (49%), Gaps = 9/303 (2%)
Query: 18 VEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMK 77
V++LI ++ D A +FD A+ + FRH ++ ++I +L F + +L + +
Sbjct: 54 VQKLIASQSDPLLAKEIFDYASQQ--PNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHR 111
Query: 78 QENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEEN-HV 136
+T +I + + Y P + F+KM +F K ++D+LV ++
Sbjct: 112 SSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYL 171
Query: 137 KRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGT 196
++A ++ R G+ P+ S N+L++A C N + + A Q+F +M R PD +Y
Sbjct: 172 QKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDD-LSIAYQLFGKMLERDVVPDVDSYKI 230
Query: 197 LINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNG 256
LI G CR G V+ A EL ++M KGF P +LI G+C E + LEEM G
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKG 286
Query: 257 IEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAV 316
P+ + L+ G C G +A +++E+++ + T+ +I +C E + SE +
Sbjct: 287 FSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDE-SEKI 345
Query: 317 EIL 319
++
Sbjct: 346 KLF 348
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 116/252 (46%), Gaps = 14/252 (5%)
Query: 147 RKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLC-RMG 205
R G P + LIK + K + L F++M P +++ L G
Sbjct: 111 RSSGYPLTGEIFTYLIKVYAEAK-LPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRG 169
Query: 206 SVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYS 265
+ +A ELF G P+ +Y L+ C +D+L A +L +M + + P+V +Y
Sbjct: 170 YLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYK 229
Query: 266 TLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQ 325
L+ G C+ G AMELL+ M+ K P+ TLI GLC +G F E + L+ M +
Sbjct: 230 ILIQGFCRKGQVNGAMELLDDMLNKGFVPDR----TLIGGLCDQGMFDEGKKYLEEMISK 285
Query: 326 GLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCS 385
G P+ + ++ GFC+ ++A + ++ ++ G + TW + V+ +C
Sbjct: 286 GFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEM-------VIPLIC- 337
Query: 386 NVDSPRAFQLYL 397
N D +L+L
Sbjct: 338 NEDESEKIKLFL 349
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 12/236 (5%)
Query: 214 FNEMEEKGFSPSVVTYTSLIHGMCQSDN-LGEAIRLLEEMKKNGIEPNVFTYSTLMDGLC 272
F +M E F+P ++ + L +A L + + +G+ PN +Y+ LM C
Sbjct: 142 FYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFC 201
Query: 273 KGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAG 332
A +L M+ + P++ +Y LI G C++G+ + A+E+LD M +G P+
Sbjct: 202 LNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRT 261
Query: 333 LYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRA 392
L G G C + + +++EM+ G SP H + N +V+G CS A
Sbjct: 262 LIG----GLCDQGMFDEGKKYLEEMISKGFSP-------HFSVSNCLVKGFCSFGKVEEA 310
Query: 393 FQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDV 448
+ + G ++ DT++ +I C + K LE+ + + D I DV
Sbjct: 311 CDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGDTRIVDV 366
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 283 LLEMMVTKHNRPNMVTYGTLINGLCK---EGKFSEAV-EILDRMRLQGLKPNAGLYGKII 338
L++ ++ KH G + L K E K E V +M P +I+
Sbjct: 102 LIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRIL 161
Query: 339 SGFCAASSY-QDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYL 397
+ Y Q A L G+ P + R +N ++Q C N D A+QL+
Sbjct: 162 DVLVSHRGYLQKAFELFKSSRLHGVMP-------NTRSYNLLMQAFCLNDDLSIAYQLFG 214
Query: 398 SMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDR 456
M R + ++D++ LI+ FC++G +N A +L++M++ G VPD+ ++GGL D+
Sbjct: 215 KMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDR----TLIGGLCDQ 269
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 74/176 (42%), Gaps = 11/176 (6%)
Query: 275 GHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLY 334
G+ +A EL + PN +Y L+ C S A ++ +M + + P+ Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 335 GKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQ 394
+I GFC A +D+M+ G P R T++ GLC +
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDR-----------TLIGGLCDQGMFDEGKK 277
Query: 395 LYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVM 450
M ++G S +CL+K FC G + +A ++E ++ +G W++V+
Sbjct: 278 YLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVI 333
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 147/326 (45%), Gaps = 16/326 (4%)
Query: 46 FRHDHTTFGVMISRLVAANQFRS-AEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
F + + + + L A + S A+ LL+RM + + + + + RV+ A
Sbjct: 560 FPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKA 619
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
F + ++ +Y +I+ N K+A A + +M++ + P VV+ ++L+ +
Sbjct: 620 REFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS 679
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
D L + EM PD Y +IN C + + + LF +M+ + P
Sbjct: 680 --------DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVP 731
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
VVTYT L+ + + L EMK ++P+VF Y+ L+D CK G +A +
Sbjct: 732 DVVTYTVLLKNKPERN-------LSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIF 784
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAA 344
+ M+ P+ Y LI CK G EA I DRM G+KP+ Y +I+G C
Sbjct: 785 DQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRN 844
Query: 345 SSYQDAANFIDEMVLGGISPSRATWS 370
A + EM+ GI P++A+ S
Sbjct: 845 GFVLKAVKLVKEMLEKGIKPTKASLS 870
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 164/377 (43%), Gaps = 22/377 (5%)
Query: 72 LLERMKQENCVVTEDIL----LTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVI 127
LL+ ++ N +V + L + RG R DA V ME + Y +I
Sbjct: 274 LLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAII 333
Query: 128 DILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGC 187
+ + ++ +A+ + +M K + V ++ +++ C+ A +F E
Sbjct: 334 EGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMG-NFSEAYDLFKEFRETNI 392
Query: 188 QPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIR 247
D Y + L ++G V EA ELF EM KG +P V+ YT+LI G C +A
Sbjct: 393 SLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFD 452
Query: 248 LLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLC 307
L+ EM G P++ Y+ L GL G + +A E L+MM + +P VT+ +I GL
Sbjct: 453 LMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLI 512
Query: 308 KEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDA-ANFIDEMVLGGISPSR 366
G+ +A + + + + +A + + GFCAA A FI R
Sbjct: 513 DAGELDKAEAFYESLEHKSRENDASM----VKGFCAAGCLDHAFERFI-----------R 557
Query: 367 ATWSLHVRMHNTVVQGLCSNVDS-PRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLN 425
+ L ++ T+ LC+ D +A L M G+ E + LI +C+ ++
Sbjct: 558 LEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVR 617
Query: 426 KAARILEEMISDGCVPD 442
KA E +++ VPD
Sbjct: 618 KAREFFEILVTKKIVPD 634
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 178/418 (42%), Gaps = 29/418 (6%)
Query: 21 LIKAEKDINKAVLMFDSAT-----AEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLER 75
L+KA +++ MFD A A YS G D +ISR++A+ + G
Sbjct: 152 LVKAYANLD----MFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWE 207
Query: 76 MKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENH 135
+++ + + + R + ++ ++ + + YL I+ L
Sbjct: 208 IERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQM 267
Query: 136 VKRAIAFYREMRKMGIPPSVVSLNI----LIKALCKNKETIDSALQIFHEMPNRGCQPDS 191
A + +R I L I +++ LC I+ A + +M G PD
Sbjct: 268 TDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMR-IEDAESVVLDMEKHGIDPDV 326
Query: 192 YTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEE 251
Y Y +I G + ++ +A ++FN+M +K + V +S++ CQ N EA L +E
Sbjct: 327 YVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKE 386
Query: 252 MKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGK 311
++ I + Y+ D L K G +A+EL M K P+++ Y TLI G C +GK
Sbjct: 387 FRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGK 446
Query: 312 FSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSL 371
S+A +++ M G P+ +Y + G Q+A + M G+ P+ T
Sbjct: 447 CSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVT--- 503
Query: 372 HVRMHNTVVQGL--CSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKA 427
HN V++GL +D AF L ++R E D ++K FC G L+ A
Sbjct: 504 ----HNMVIEGLIDAGELDKAEAFYESLEHKSR----ENDA--SMVKGFCAAGCLDHA 551
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 145/328 (44%), Gaps = 20/328 (6%)
Query: 4 RTLFKWPKQITSSLVEQLIKAEKD-INKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVA 62
R F PK + +L L AEKD I+KA + D + G + + +G +I
Sbjct: 557 RLEFPLPKSVYFTLFTSLC-AEKDYISKAQDLLDRM---WKLGVEPEKSMYGKLIGAWCR 612
Query: 63 ANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKS 122
N R A E + + V + Y R++ P A +F M+ +K +
Sbjct: 613 VNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVT 672
Query: 123 YLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEM 182
Y +++ E + REM + P VV I+I C + + +F +M
Sbjct: 673 YSVLLNSDPE-------LDMKREMEAFDVIPDVVYYTIMINRYCHLND-LKKVYALFKDM 724
Query: 183 PNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNL 242
R PD TY L+ + L EM+ P V YT LI C+ +L
Sbjct: 725 KRREIVPDVVTYTVLLKN-------KPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDL 777
Query: 243 GEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTL 302
GEA R+ ++M ++G++P+ Y+ L+ CK G+ +A + + M+ +P++V Y L
Sbjct: 778 GEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTAL 837
Query: 303 INGLCKEGKFSEAVEILDRMRLQGLKPN 330
I G C+ G +AV+++ M +G+KP
Sbjct: 838 IAGCCRNGFVLKAVKLVKEMLEKGIKPT 865
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/471 (21%), Positives = 177/471 (37%), Gaps = 109/471 (23%)
Query: 72 LLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILV 131
+L++ K+ NCV+ IL C+ G D +F + + + + Y D L
Sbjct: 352 MLKKRKRINCVIVSSILQCYCQ-MGNFSEAYD---LFKEFRETNISLDRVCYNVAFDALG 407
Query: 132 EENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDS----------------- 174
+ V+ AI +REM GI P V++ LI C + D+
Sbjct: 408 KLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIV 467
Query: 175 -----------------ALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEM 217
A + M NRG +P T+ +I GL G + +A+ + +
Sbjct: 468 IYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESL 527
Query: 218 EEK----------GFS-------------------PSVVTYTSLIHGMCQSDNLGEAIRL 248
E K GF P V +T + D + +A L
Sbjct: 528 EHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDL 587
Query: 249 LEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCK 308
L+ M K G+EP Y L+ C+ + +A E E++VTK P++ TY +IN C+
Sbjct: 588 LDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCR 647
Query: 309 EGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRAT 368
+ +A + + M+ + +KP+ Y +++ + EM + P
Sbjct: 648 LNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVVY 700
Query: 369 WSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLI------------K 416
+++ + + C D + + L+ M+ R I ++ T+ L+ K
Sbjct: 701 YTIMINRY-------CHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMK 753
Query: 417 CF----------------CKRGDLNKAARILEEMISDGCVPDKGIWDVVMG 451
F CK GDL +A RI ++MI G PD + ++
Sbjct: 754 AFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIA 804
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 137/315 (43%), Gaps = 28/315 (8%)
Query: 141 AFYREMR-KMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLIN 199
AF R +R + +P SV L +LC K+ I A + M G +P+ YG LI
Sbjct: 551 AFERFIRLEFPLPKSVYF--TLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIG 608
Query: 200 GLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEP 259
CR+ +V +A+E F + K P + TYT +I+ C+ + +A L E+MK+ ++P
Sbjct: 609 AWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKP 668
Query: 260 NVFTYSTLM--DGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVE 317
+V TYS L+ D ++A +++ P++V Y +IN C +
Sbjct: 669 DVVTYSVLLNSDPELDMKREMEAFDVI---------PDVVYYTIMINRYCHLNDLKKVYA 719
Query: 318 ILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHN 377
+ M+ + + P+ Y ++ + N EM + P V +
Sbjct: 720 LFKDMKRREIVPDVVTYTVLLKN-------KPERNLSREMKAFDVKPD-------VFYYT 765
Query: 378 TVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISD 437
++ C D A +++ M G+ + + LI C CK G L +A I + MI
Sbjct: 766 VLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIES 825
Query: 438 GCVPDKGIWDVVMGG 452
G PD + ++ G
Sbjct: 826 GVKPDVVPYTALIAG 840
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/411 (21%), Positives = 170/411 (41%), Gaps = 30/411 (7%)
Query: 35 FDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRG 94
F++ + G + + T ++I L+ A + AE E ++ ++ ++ C
Sbjct: 486 FETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAA 545
Query: 95 YGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDIL-VEENHVKRAIAFYREMRKMGIPP 153
H F + + + Y T+ L E++++ +A M K+G+ P
Sbjct: 546 GCLDH-------AFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEP 598
Query: 154 SVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKEL 213
LI A C+ + A + F + + PD +TY +IN CR+ +A L
Sbjct: 599 EKSMYGKLIGAWCR-VNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYAL 657
Query: 214 FNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCK 273
F +M+ + P VVTY+ L++ + D + EM+ + P+V Y+ +++ C
Sbjct: 658 FEDMKRRDVKPDVVTYSVLLNSDPELD-------MKREMEAFDVIPDVVYYTIMINRYCH 710
Query: 274 GGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGL 333
+ L + M + P++VTY L+ E S ++ D +KP+
Sbjct: 711 LNDLKKVYALFKDMKRREIVPDVVTYTVLLKNK-PERNLSREMKAFD------VKPDVFY 763
Query: 334 YGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAF 393
Y +I C +A D+M+ G+ P A ++ ++ C A
Sbjct: 764 YTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYT-------ALIACCCKMGYLKEAK 816
Query: 394 QLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKG 444
++ M G+ ++ + LI C+ G + KA ++++EM+ G P K
Sbjct: 817 MIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKA 867
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 116/249 (46%), Gaps = 40/249 (16%)
Query: 49 DHTTFGVMISRLVAANQFRSAEGLLERMKQENC---VVTEDILLTICRGYGRVHRPLDAI 105
D T+ +MI+ N+ + A L E MK+ + VVT +LL LD
Sbjct: 634 DLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLN-------SDPELDMK 686
Query: 106 RVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA- 164
R +ME F + Y +I+ N +K+ A +++M++ I P VV+ +L+K
Sbjct: 687 R---EMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNK 743
Query: 165 ----LCKNKETID----------------------SALQIFHEMPNRGCQPDSYTYGTLI 198
L + + D A +IF +M G PD+ Y LI
Sbjct: 744 PERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALI 803
Query: 199 NGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIE 258
C+MG + EAK +F+ M E G P VV YT+LI G C++ + +A++L++EM + GI+
Sbjct: 804 ACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIK 863
Query: 259 PNVFTYSTL 267
P + S +
Sbjct: 864 PTKASLSAV 872
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 123/299 (41%), Gaps = 17/299 (5%)
Query: 161 LIKALCKNKETIDSALQIF-HEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEE 219
L+KA N + D A+ IF + G PD LI+ + G F E+E
Sbjct: 152 LVKAYA-NLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIER 210
Query: 220 KGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHS-- 277
G TY ++ + ++D+ E +LL + + Y ++GLC +
Sbjct: 211 LGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDI 270
Query: 278 ----LQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGL 333
LQ + ++V K + + Y ++ GLC E + +A ++ M G+ P+ +
Sbjct: 271 AYFLLQPLRDANILVDKSDLG--IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYV 328
Query: 334 YGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAF 393
Y II G + A + ++M+ + ++ + ++++Q C + A+
Sbjct: 329 YSAIIEGHRKNMNIPKAVDVFNKML-------KKRKRINCVIVSSILQCYCQMGNFSEAY 381
Query: 394 QLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGG 452
L+ R IS++ ++ K G + +A + EM G PD + ++GG
Sbjct: 382 DLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGG 440
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 112/269 (41%), Gaps = 12/269 (4%)
Query: 196 TLINGLCRMGSVSEAKELF-NEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKK 254
L+ + EA ++F G +P + LI M S + E+++
Sbjct: 151 ALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIER 210
Query: 255 NGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSE 314
G++ + TY ++ L + + +LL ++ R V Y I GLC
Sbjct: 211 LGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDI 270
Query: 315 AVEILDRMRLQGL---KPNAGL-YGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWS 370
A +L +R + K + G+ Y K++ G C +DA + + +M GI P
Sbjct: 271 AYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPD----- 325
Query: 371 LHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARI 430
V +++ +++G N++ P+A ++ M + I +++C+C+ G+ ++A +
Sbjct: 326 --VYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDL 383
Query: 431 LEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
+E D+ ++V L KV
Sbjct: 384 FKEFRETNISLDRVCYNVAFDALGKLGKV 412
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 83/197 (42%), Gaps = 14/197 (7%)
Query: 49 DHTTFGVMISRLVAANQFRSAEGLLERMKQENCV---VTEDILLTICRGYGRVHRPLDAI 105
D + +MI+R N + L + MK+ V VT +LL + R L
Sbjct: 697 DVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLK-----NKPERNLS-- 749
Query: 106 RVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKAL 165
+M+ F +K Y +ID + + A + +M + G+ P LI
Sbjct: 750 ---REMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACC 806
Query: 166 CKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPS 225
CK + A IF M G +PD Y LI G CR G V +A +L EM EKG P+
Sbjct: 807 CKMG-YLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPT 865
Query: 226 VVTYTSLIHGMCQSDNL 242
+ +++ + ++ L
Sbjct: 866 KASLSAVHYAKLKAKGL 882
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 104/450 (23%), Positives = 206/450 (45%), Gaps = 16/450 (3%)
Query: 4 RTLFKWPKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAA 63
R ++ P + +++ L+ E ++K + +FD S G ++ +I+
Sbjct: 133 RQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMP---SQGVSRSVFSYTALINAYGRN 189
Query: 64 NQFRSAEGLLERMKQEN---CVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQ 120
++ ++ LL+RMK E ++T + ++ C G L + +F +M ++
Sbjct: 190 GRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGL--LGLFAEMRHEGIQPDI 247
Query: 121 KSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFH 180
+Y T++ A +R M GI P + + + L++ K + ++ +
Sbjct: 248 VTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRR-LEKVCDLLG 306
Query: 181 EMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSD 240
EM + G PD +Y L+ + GS+ EA +F++M+ G +P+ TY+ L++ QS
Sbjct: 307 EMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSG 366
Query: 241 NLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYG 300
+ +L EMK + +P+ TY+ L++ +GG+ + + L MV ++ P+M TY
Sbjct: 367 RYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYE 426
Query: 301 TLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLG 360
+I K G +A +IL M + P++ Y +I F A+ Y++A + M
Sbjct: 427 GIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEV 486
Query: 361 GISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCK 420
G +PS T+ H +++ GL ++ + + GI DTF+ I+ + +
Sbjct: 487 GSNPSIETF--HSLLYSFARGGLVKESEA-----ILSRLVDSGIPRNRDTFNAQIEAYKQ 539
Query: 421 RGDLNKAARILEEMISDGCVPDKGIWDVVM 450
G +A + +M C PD+ + V+
Sbjct: 540 GGKFEEAVKTYVDMEKSRCDPDERTLEAVL 569
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/415 (21%), Positives = 166/415 (40%), Gaps = 29/415 (6%)
Query: 53 FGVMISRLVAANQFRSAEGLLERMKQE-NCVVTEDILLTICRGYGRVHRPLDAIRVFHKM 111
F ++ ++ + L + M+++ C E I + GR + VF +M
Sbjct: 108 FALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEM 167
Query: 112 EDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKET 171
+ + SY +I+ + ++ M+ I PS+++ N +I A +
Sbjct: 168 PSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLD 227
Query: 172 IDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTS 231
+ L +F EM + G QPD TY TL++ G EA+ +F M + G P + TY+
Sbjct: 228 WEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSH 287
Query: 232 LIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKH 291
L+ + L + LL EM G P++ +Y+ L++ K G +AM + M
Sbjct: 288 LVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG 347
Query: 292 NRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAA 351
PN TY L+N + G++ + ++ M+ P+A Y +I F +++
Sbjct: 348 CTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVV 407
Query: 352 NFIDEMVLGGISPSRATW----------SLH------------------VRMHNTVVQGL 383
+MV I P T+ LH + + V++
Sbjct: 408 TLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAF 467
Query: 384 CSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDG 438
A + +M G + I+TF L+ F + G + ++ IL ++ G
Sbjct: 468 GQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSG 522
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/415 (20%), Positives = 169/415 (40%), Gaps = 20/415 (4%)
Query: 43 SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPL 102
S G D T++ V++ + + A G+ +M+ C + + +G+ R
Sbjct: 310 SGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYD 369
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
D ++F +M+ +Y +I++ E + K + + +M + I P + + +I
Sbjct: 370 DVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGII 429
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF 222
A C + A +I M P S Y +I + EA FN M E G
Sbjct: 430 FA-CGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGS 488
Query: 223 SPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAME 282
+PS+ T+ SL++ + + E+ +L + +GI N T++ ++ +GG +A++
Sbjct: 489 NPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVK 548
Query: 283 LLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFC 342
M P+ T +++ E E + M+ + P+ Y +++ +
Sbjct: 549 TYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYG 608
Query: 343 AASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQL--YL--S 398
+ D ++EM+ +S +H + Q + + D +Q+ Y+
Sbjct: 609 KTERWDDVNELLEEMLSNRVS----------NIHQVIGQMIKGDYDDDSNWQIVEYVLDK 658
Query: 399 MRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPD-----KGIWDV 448
+ + G + I ++ L+ G +AAR+L E G P+ K +W V
Sbjct: 659 LNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPELFRKNKLVWSV 713
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 151/318 (47%), Gaps = 9/318 (2%)
Query: 104 AIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIK 163
A+ ++ + D K +++ LV+ + I + +M++ G+ P VV+ N L+
Sbjct: 150 ALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLA 209
Query: 164 ALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFS 223
K K A+++ E+P+ G Q DS YGT++ G EA+ +M+ +G S
Sbjct: 210 GCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHS 269
Query: 224 PSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMEL 283
P++ Y+SL++ + +A L+ EMK G+ PN +TL+ KGG ++ EL
Sbjct: 270 PNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSREL 329
Query: 284 LEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCA 343
L + + N + Y L++GL K GK EA I D M+ +G++ + +IS C
Sbjct: 330 LSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCR 389
Query: 344 ASSYQDAANFIDEMVLGGISPSRATW-SLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTR 402
+ +++A + S T+ + M NT++ C + ++ M +
Sbjct: 390 SKRFKEAKELSRD--------SETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQ 441
Query: 403 GISIEIDTFDCLIKCFCK 420
+S + +TF LIK F K
Sbjct: 442 AVSPDYNTFHILIKYFIK 459
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 98/422 (23%), Positives = 189/422 (44%), Gaps = 17/422 (4%)
Query: 31 AVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLT 90
AV+ + AE RH ++ ++R A ++ + + L +++ V+ L
Sbjct: 48 AVIELPANVAEAPRSKRHSNS----YLARKSAISEVQRSSDFLSSLQRLATVLKVQDLNV 103
Query: 91 ICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMG 150
I R +G R D I++F M+ K + +Y + I + +N V +A+ Y+ +
Sbjct: 104 ILRDFGISGRWQDLIQLFEWMQQHG-KISVSTYSSCIKFVGAKN-VSKALEIYQSIPDES 161
Query: 151 IPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRM-GSVSE 209
+V N ++ L KN + +DS +++F +M G +PD TY TL+ G ++ +
Sbjct: 162 TKINVYICNSILSCLVKNGK-LDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPK 220
Query: 210 AKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGE-AIRLLEEMKKNGIEPNVFTYSTLM 268
A EL E+ G V Y +++ +C S+ E A +++MK G PN++ YS+L+
Sbjct: 221 AIELIGELPHNGIQMDSVMYGTVL-AICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLL 279
Query: 269 DGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLK 328
+ G +A EL+ M + PN V TL+ K G F + E+L + G
Sbjct: 280 NSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYA 339
Query: 329 PNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVD 388
N Y ++ G A ++A + D+M G+ S+ ++ LC +
Sbjct: 340 ENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSI-------MISALCRSKR 392
Query: 389 SPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDV 448
A +L T ++ + ++ +C+ G++ R++++M PD + +
Sbjct: 393 FKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHI 452
Query: 449 VM 450
++
Sbjct: 453 LI 454
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 156/329 (47%), Gaps = 13/329 (3%)
Query: 134 NHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYT 193
+ V+R+ F ++++ V LN++++ + D +Q+F M G + T
Sbjct: 77 SEVQRSSDFLSSLQRLATVLKVQDLNVILRDFGISGRWQD-LIQLFEWMQQHG-KISVST 134
Query: 194 YGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMK 253
Y + I +VS+A E++ + ++ +V S++ + ++ L I+L ++MK
Sbjct: 135 YSSCIK-FVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMK 193
Query: 254 KNGIEPNVFTYSTLMDGL--CKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGK 311
++G++P+V TY+TL+ G K G+ +A+EL+ + + + V YGT++ G+
Sbjct: 194 RDGLKPDVVTYNTLLAGCIKVKNGYP-KAIELIGELPHNGIQMDSVMYGTVLAICASNGR 252
Query: 312 FSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSL 371
EA + +M+++G PN Y +++ + Y+ A + EM G+ P++ +
Sbjct: 253 SEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTT 312
Query: 372 HVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARIL 431
++++ + GL R+ +L + + G + + L+ K G L +A I
Sbjct: 313 LLKVY--IKGGLFD-----RSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIF 365
Query: 432 EEMISDGCVPDKGIWDVVMGGLWDRKKVR 460
++M G D +++ L K+ +
Sbjct: 366 DDMKGKGVRSDGYANSIMISALCRSKRFK 394
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/307 (20%), Positives = 127/307 (41%), Gaps = 1/307 (0%)
Query: 44 NGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLD 103
NG + D +G +++ + + AE +++MK E ++ Y
Sbjct: 231 NGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKK 290
Query: 104 AIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIK 163
A + +M+ L + T++ + ++ R+ E+ G + + +L+
Sbjct: 291 ADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMD 350
Query: 164 ALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFS 223
L K + ++ A IF +M +G + D Y +I+ LCR EAKEL + E
Sbjct: 351 GLSKAGK-LEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEK 409
Query: 224 PSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMEL 283
+V +++ C++ + +R++++M + + P+ T+ L+ K L A +
Sbjct: 410 CDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQT 469
Query: 284 LEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCA 343
M +K +R +LI L K +EA + + +R L+ KI+
Sbjct: 470 TLDMHSKGHRLEEELCSSLIYHLGKIRAQAEAFSVYNMLRYSKRTICKELHEKILHILIQ 529
Query: 344 ASSYQDA 350
+ +DA
Sbjct: 530 GNLLKDA 536
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 188/422 (44%), Gaps = 30/422 (7%)
Query: 49 DHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILL--TICRGYGRVHRPLDAIR 106
D T+ +I+ F SA L++M+Q+ V+ D++L + R+ AI
Sbjct: 189 DRYTYSTLITSFGKEGMFDSALSWLQKMEQDR--VSGDLVLYSNLIELSRRLCDYSKAIS 246
Query: 107 VFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALC 166
+F +++ + +Y ++I++ + + A +EM + G+ P+ VS + L+
Sbjct: 247 IFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYV 306
Query: 167 KNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSV 226
+N + ++ AL +F EM C D T +I+ ++ V EA LF + + P+V
Sbjct: 307 ENHKFLE-ALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNV 365
Query: 227 VTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEM 286
V+Y +++ +++ GEAI L M++ IE NV TY+T++ K +A L++
Sbjct: 366 VSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQE 425
Query: 287 MVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASS 346
M ++ PN +TY T+I+ K GK A + ++R G++ + LY +I +
Sbjct: 426 MQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGL 485
Query: 347 YQDAANFIDEMVLGGISP--------------SRATWSLHVRMHNTVVQGL--------- 383
A + E+ L P ATW + V+ +
Sbjct: 486 MGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINL 545
Query: 384 -CSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCV-P 441
N +++ MRT G + + ++ + K+ + KA + EM +GCV P
Sbjct: 546 YSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFP 605
Query: 442 DK 443
D+
Sbjct: 606 DE 607
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 166/393 (42%), Gaps = 79/393 (20%)
Query: 120 QKSYLTVIDILVEENHVKRAIAFYREMRKMG-IPPSVVSLNILIKALCKNKETIDSALQI 178
Q S ++ +L EN +R++A + + PSV + N++++ + + K+ D A +
Sbjct: 119 QLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQ-FDIAHGL 177
Query: 179 FHEMPNRGCQPDSYTYGTLINGLCRMG--------------------------------- 205
F EM R PD YTY TLI + G
Sbjct: 178 FDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRR 237
Query: 206 --SVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFT 263
S+A +F+ ++ G +P +V Y S+I+ ++ EA L++EM + G+ PN +
Sbjct: 238 LCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVS 297
Query: 264 YSTLMDGLCKGGHSLQAMELL-EM-----------------------MVTKHNR------ 293
YSTL+ + L+A+ + EM MV + +R
Sbjct: 298 YSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLR 357
Query: 294 -----PNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQ 348
PN+V+Y T++ + F EA+ + M+ + ++ N Y +I + ++
Sbjct: 358 KMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHE 417
Query: 349 DAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEI 408
A N + EM GI P+ T+S + + G +D RA L+ +R+ G+ I+
Sbjct: 418 KATNLVQEMQSRGIEPNAITYSTIIS-----IWGKAGKLD--RAATLFQKLRSSGVEIDQ 470
Query: 409 DTFDCLIKCFCKRGDLNKAARILEEMISDGCVP 441
+ +I + + G + A R+L E+ +P
Sbjct: 471 VLYQTMIVAYERVGLMGHAKRLLHELKLPDNIP 503
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/430 (21%), Positives = 182/430 (42%), Gaps = 16/430 (3%)
Query: 27 DINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTED 86
D +KA+ +F +G D + MI+ A FR A L++ M + +
Sbjct: 240 DYSKAISIFSRLK---RSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTV 296
Query: 87 ILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREM 146
T+ Y H+ L+A+ VF +M++ + +ID+ + + VK A + +
Sbjct: 297 SYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSL 356
Query: 147 RKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGS 206
RKM I P+VVS N +++ + E A+ +F M + + + TY T+I +
Sbjct: 357 RKMDIEPNVVSYNTILRVYGE-AELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTME 415
Query: 207 VSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYST 266
+A L EM+ +G P+ +TY+++I ++ L A L ++++ +G+E + Y T
Sbjct: 416 HEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQT 475
Query: 267 LMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQG 326
++ + G A LL + N P T I L K G+ EA + + G
Sbjct: 476 MIVAYERVGLMGHAKRLLHELKLPDNIPR----ETAITILAKAGRTEEATWVFRQAFESG 531
Query: 327 LKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSN 386
+ ++G +I+ + Y + ++M G P ++ V+
Sbjct: 532 EVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAM-------VLNAYGKQ 584
Query: 387 VDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIW 446
+ +A +Y M+ G + ++ + + D + + + SD V K +
Sbjct: 585 REFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPNVNSKEL- 643
Query: 447 DVVMGGLWDR 456
+V+ L++R
Sbjct: 644 HLVVAALYER 653
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 151/346 (43%), Gaps = 30/346 (8%)
Query: 136 VKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYG 195
V+ +RE+ G SVV+ N L+ L + ++ Q++ M G P++YT+
Sbjct: 182 VEEGFRVFREVLDSGFSVSVVTCNHLLNGL-LKLDLMEDCWQVYSVMCRVGIHPNTYTFN 240
Query: 196 TLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKN 255
L N C + E + +MEE+GF P +VTY +L+ C+ L EA L + M +
Sbjct: 241 ILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRR 300
Query: 256 GIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEA 315
+ P++ TY++L+ GLCK G +A + MV + +P+ ++Y TLI CKEG ++
Sbjct: 301 RVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQS 360
Query: 316 VEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFI---------------DEMVLG 360
++L M + P+ I+ GF A NF+ D +++
Sbjct: 361 KKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVS 420
Query: 361 GISPSRATWSLHV--------------RMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISI 406
+ + H+ +N +++ L A L ++ + +
Sbjct: 421 LCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVL 480
Query: 407 EIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGG 452
+ T+ LI C C+ G +A ++ EM PD I ++ G
Sbjct: 481 DAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYG 526
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 151/359 (42%), Gaps = 62/359 (17%)
Query: 133 ENHVKRAIAFYREMR-KMGIPPSVVSLNILIKALCKNKETIDSALQIFHEM--------- 182
++ RAI F++ ++ +G P+V + +L+ L +K+ A+Q E+
Sbjct: 90 QSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVSSKK-FPLAMQFLCELIELTSKKEE 148
Query: 183 ---------PNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVT----- 228
C D + L+ G ++G V E +F E+ + GFS SVVT
Sbjct: 149 VDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLL 208
Query: 229 ------------------------------YTSLIHGMCQSDNLGEAIRLLEEMKKNGIE 258
+ L + C N E LE+M++ G E
Sbjct: 209 NGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFE 268
Query: 259 PNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEI 318
P++ TY+TL+ C+ G +A L ++M + P++VTY +LI GLCK+G+ EA +
Sbjct: 269 PDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQT 328
Query: 319 LDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNT 378
RM +G+KP+ Y +I +C Q + + EM+ + P R T +
Sbjct: 329 FHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKV------- 381
Query: 379 VVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISD 437
+V+G A + +R + I + D LI C+ G A +L+ +I +
Sbjct: 382 IVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEE 440
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 157/333 (47%), Gaps = 15/333 (4%)
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
D +V+ M + ++ + ++ +++ + F +M + G P +V+ N L+
Sbjct: 219 DCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLV 278
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF 222
+ C+ + + A ++ M R PD TY +LI GLC+ G V EA + F+ M ++G
Sbjct: 279 SSYCR-RGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGI 337
Query: 223 SPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAME 282
P ++Y +LI+ C+ + ++ +LL EM N + P+ FT +++G + G L A+
Sbjct: 338 KPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVN 397
Query: 283 -LLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRM-RLQGLKPNAGLYGKIISG 340
++E+ K + P V LI LC+EGK A +LDR+ +G + Y +I
Sbjct: 398 FVVELRRLKVDIPFEVC-DFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIES 456
Query: 341 FCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMR 400
+ ++A +VL G L + + ++ LC + A L M
Sbjct: 457 LSRCDAIEEA------LVLKG-KLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMF 509
Query: 401 TRGISIEIDTFDC--LIKCFCKRGDLNKAARIL 431
++ D+F C L+ +CK D +KA R+L
Sbjct: 510 DS--EVKPDSFICGALVYGYCKELDFDKAERLL 540
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 132/322 (40%), Gaps = 36/322 (11%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
GF D T+ ++S + + A L + M + V ++ +G + R +A
Sbjct: 266 GFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREA 325
Query: 105 IRVFHKMEDFQLKFTQKSYLT-----------------------------------VIDI 129
+ FH+M D +K SY T +++
Sbjct: 326 HQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEG 385
Query: 130 LVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQP 189
V E + A+ F E+R++ + + LI +LC+ + + + + G +
Sbjct: 386 FVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEA 445
Query: 190 DSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLL 249
TY LI L R ++ EA L +++ + TY +LI +C+ EA L+
Sbjct: 446 KPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLM 505
Query: 250 EEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKE 309
EM + ++P+ F L+ G CK +A LL + + + +Y +L+ +C+
Sbjct: 506 AEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCET 565
Query: 310 G-KFSEAVEILDRMRLQGLKPN 330
G + +A+E+ +RM+ G PN
Sbjct: 566 GCGYKKALELQERMQRLGFVPN 587
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 101/242 (41%), Gaps = 29/242 (11%)
Query: 221 GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEM-----KKNGIE---------------PN 260
G P+V Y L+H + S A++ L E+ KK ++ P
Sbjct: 108 GKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVSATDECNWDPV 167
Query: 261 VFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILD 320
VF L+ G K G + + ++ ++VT L+NGL K + ++
Sbjct: 168 VF--DMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYS 225
Query: 321 RMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVV 380
M G+ PN + + + FC S++++ +F+++M G P T+ NT+V
Sbjct: 226 VMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTY-------NTLV 278
Query: 381 QGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCV 440
C AF LY M R + ++ T+ LIK CK G + +A + M+ G
Sbjct: 279 SSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIK 338
Query: 441 PD 442
PD
Sbjct: 339 PD 340
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 163/390 (41%), Gaps = 46/390 (11%)
Query: 16 SLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLER 75
++ E L D KA+ F+ E +GFRH TF +I L +F + L+ R
Sbjct: 49 TVCEALTCYSNDWQKALEFFN--WVERESGFRHTTETFNRVIDILGKYFEFEISWALINR 106
Query: 76 MKQENCVVTEDILLTIC-RGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEEN 134
M V + I + Y H +AI + K++DF L+ + S+ ++D L E
Sbjct: 107 MIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLR-DETSFYNLVDALCEHK 165
Query: 135 HVKRA--------------------------------------IAFYREMRKMGIPPSVV 156
HV A ++++M G+ +
Sbjct: 166 HVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLF 225
Query: 157 SLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNE 216
S +I + +CK+ + A++++ EM +R + D Y T+I + V +F E
Sbjct: 226 SYSIYMDIMCKSGKPW-KAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFRE 284
Query: 217 MEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGH 276
M E+G P+V T+ ++I +C+ + +A R+L+EM K G +P+ TY L L K
Sbjct: 285 MRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPS- 343
Query: 277 SLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGK 336
+ + L M+ RP M TY L+ + G + + M+ G P++ Y
Sbjct: 344 --EILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNA 401
Query: 337 IISGFCAASSYQDAANFIDEMVLGGISPSR 366
+I A + +EM+ G+SP R
Sbjct: 402 VIDALIQKGMLDMAREYEEEMIERGLSPRR 431
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 107/214 (50%), Gaps = 8/214 (3%)
Query: 100 RPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLN 159
+P A++++ +M+ ++K +Y TVI + V+ I +REMR+ G P+V + N
Sbjct: 239 KPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHN 298
Query: 160 ILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEE 219
+IK LC++ D A ++ EMP RGCQPDS TY L + R+ SE LF M
Sbjct: 299 TIIKLLCEDGRMRD-AYRMLDEMPKRGCQPDSITYMCLFS---RLEKPSEILSLFGRMIR 354
Query: 220 KGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQ 279
G P + TY L+ + L + + + MK++G P+ Y+ ++D L + G
Sbjct: 355 SGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDM 414
Query: 280 AMELLEMMVTK----HNRPNMVTYGTLINGLCKE 309
A E E M+ + RP +V +C+E
Sbjct: 415 AREYEEEMIERGLSPRRRPELVEKSLDETLVCRE 448
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 159/358 (44%), Gaps = 23/358 (6%)
Query: 104 AIRVFHKME-DFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSV---VSLN 159
A+ F+ +E + + T +++ VIDIL + + + I++ R +G SV V+
Sbjct: 64 ALEFFNWVERESGFRHTTETFNRVIDILGK--YFEFEISWALINRMIGNTESVPNHVTFR 121
Query: 160 ILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELF--NEM 217
I+ K + A+ + ++ + + D ++ L++ LC V EA+EL +
Sbjct: 122 IVFKRYV-TAHLVQEAIDAYDKLDDFNLR-DETSFYNLVDALCEHKHVVEAEELCFGKNV 179
Query: 218 EEKGFSPSVVTYTSLI-HGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGH 276
GFS S +LI G + G+ ++M G+ ++F+YS MD +CK G
Sbjct: 180 IGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGK 239
Query: 277 SLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGK 336
+A++L + M ++ + ++V Y T+I + + + MR +G +PN +
Sbjct: 240 PWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNT 299
Query: 337 IISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSP-RAFQL 395
II C +DA +DEM G P T+ L S ++ P L
Sbjct: 300 IIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITY-----------MCLFSRLEKPSEILSL 348
Query: 396 YLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
+ M G+ ++DT+ L++ F + G L + + M G PD ++ V+ L
Sbjct: 349 FGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDAL 406
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 147/348 (42%), Gaps = 25/348 (7%)
Query: 102 LDAIRVFHKMEDFQLKFTQKSYLTVIDILV-EENHVKRAIAFYREM-RKMGIPPSVVSLN 159
+D + + E+ Q + QK TV + L N ++A+ F+ + R+ G + + N
Sbjct: 29 VDDAKFRSQEEEDQSSYDQK---TVCEALTCYSNDWQKALEFFNWVERESGFRHTTETFN 85
Query: 160 ILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEE 219
+I L K E S I + N P+ T+ + V EA + ++++++
Sbjct: 86 RVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDD 145
Query: 220 KGFSPSVVTYTSLIHGMCQSDNLGEAIRLL--EEMKKNGIE-PNVFTYSTLMDGLCKGGH 276
Y +L+ +C+ ++ EA L + + NG N ++ ++ G K G
Sbjct: 146 FNLRDETSFY-NLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGW 204
Query: 277 SLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGK 336
+ E + M T+ ++ +Y ++ +CK GK +AV++ M+ + +K + Y
Sbjct: 205 WGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNT 264
Query: 337 IISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLY 396
+I A+ + EM G P+ AT HNT+++ LC + A+++
Sbjct: 265 VIRAIGASQGVEFGIRVFREMRERGCEPNVAT-------HNTIIKLLCEDGRMRDAYRML 317
Query: 397 LSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILE---EMISDGCVP 441
M RG + T+ CL L K + IL MI G P
Sbjct: 318 DEMPKRGCQPDSITYMCLF------SRLEKPSEILSLFGRMIRSGVRP 359
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 165/324 (50%), Gaps = 16/324 (4%)
Query: 117 KFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCK--NKETIDS 174
K + +Y +DIL + R F MR +V+LN + K + + +
Sbjct: 118 KHSSDAYDMAVDILGKAKKWDRMKEFVERMR----GDKLVTLNTVAKIMRRFAGAGEWEE 173
Query: 175 ALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIH 234
A+ IF + G + ++ + L++ LC+ V +A+ + +++ +P+ T+ IH
Sbjct: 174 AVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTFNIFIH 232
Query: 235 GMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRP 294
G C+++ + EA+ ++EMK +G P V +Y+T++ C+ ++ E+L M + P
Sbjct: 233 GWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPP 292
Query: 295 NMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAAN-F 353
N +TY T+++ L + +F EA+ + RM+ G KP++ Y +I A ++A F
Sbjct: 293 NSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVF 352
Query: 354 IDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGI-SIEIDTFD 412
EM G+S + +T +N+++ C + + +A +L M + + + ++ T+
Sbjct: 353 RVEMPELGVSINTST-------YNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQ 405
Query: 413 CLIKCFCKRGDLNKAARILEEMIS 436
L++ KRGD+ + ++L+EM++
Sbjct: 406 PLLRSCFKRGDVVEVGKLLKEMVT 429
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 182/432 (42%), Gaps = 49/432 (11%)
Query: 13 ITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGL 72
++ LV +L+ +D ++ L AE G +H + + + L A ++ +
Sbjct: 85 LSDGLVHKLLHRFRDDWRSALGI-LKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEF 143
Query: 73 LERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVE 132
+ERM+ + +VT + + I R + +A+ +F ++ +F
Sbjct: 144 VERMRGDK-LVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEF------------------ 184
Query: 133 ENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSY 192
G+ + S+N+L+ LCK K ++ A + ++ + P+++
Sbjct: 185 -----------------GLEKNTESMNLLLDTLCKEKR-VEQARVVLLQLKSH-ITPNAH 225
Query: 193 TYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEM 252
T+ I+G C+ V EA EM+ GF P V++YT++I CQ + +L EM
Sbjct: 226 TFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEM 285
Query: 253 KKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKF 312
+ NG PN TY+T+M L +A+ + M +P+ + Y LI+ L + G+
Sbjct: 286 EANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRL 345
Query: 313 SEAVEILD-RMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGI-SPSRATWS 370
EA + M G+ N Y +I+ +C A + EM + +P
Sbjct: 346 EEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPD----- 400
Query: 371 LHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRG-ISIEIDTFDCLIKCFCKRGDLNKAAR 429
V + +++ D +L M T+ +S++ T+ LI+ C+ A
Sbjct: 401 --VHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYC 458
Query: 430 ILEEMISDGCVP 441
+ EEMIS P
Sbjct: 459 LFEEMISQDITP 470
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 109/263 (41%), Gaps = 39/263 (14%)
Query: 94 GYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPP 153
G+ + +R +A+ +M+ + SY T+I ++ + EM G PP
Sbjct: 233 GWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPP 292
Query: 154 SVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKEL 213
+ ++ ++ +L KE + AL++ M GC+PDS Y LI+ L R G + EA+ +
Sbjct: 293 NSITYTTIMSSLNAQKE-FEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERV 351
Query: 214 FN-EMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGI-EPNVFTYSTLM--- 268
F EM E G S + TY S+I C D +AI LL+EM+ + + P+V TY L+
Sbjct: 352 FRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSC 411
Query: 269 ---------------------------------DGLCKGGHSLQAMELLEMMVTKHNRPN 295
LC+ A L E M+++ P
Sbjct: 412 FKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPR 471
Query: 296 MVTYGTLINGLCKEGKFSEAVEI 318
T L+ + K+ A I
Sbjct: 472 HRTCLLLLEEVKKKNMHESAERI 494
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 86/190 (45%), Gaps = 4/190 (2%)
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYR-EMRKMGIPPSVVSLNIL 161
+A+RV +M+ K Y +I L ++ A +R EM ++G+ + + N +
Sbjct: 312 EALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSM 371
Query: 162 IKALCKNKETIDSALQIFHEMPNRG-CQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
I C + E D A+++ EM + C PD +TY L+ + G V E +L EM K
Sbjct: 372 IAMYCHHDEE-DKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTK 430
Query: 221 G-FSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQ 279
S TYT LI +C+++ A L EEM I P T L++ + K
Sbjct: 431 HHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHES 490
Query: 280 AMELLEMMVT 289
A + +M T
Sbjct: 491 AERIEHIMKT 500
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 295 NMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFI 354
N + L++ LCKE + +A +L +++ + PNA + I G+C A+ ++A I
Sbjct: 189 NTESMNLLLDTLCKEKRVEQARVVLLQLK-SHITPNAHTFNIFIHGWCKANRVEEALWTI 247
Query: 355 DEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCL 414
EM G P V + T+++ C + + +++ M G T+ +
Sbjct: 248 QEMKGHGFRPC-------VISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTI 300
Query: 415 IKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
+ + + +A R+ M GC PD ++ ++ L
Sbjct: 301 MSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTL 339
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 86/217 (39%), Gaps = 18/217 (8%)
Query: 43 SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPL 102
+NG + T+ ++S L A +F A + RMK+ C + R R
Sbjct: 287 ANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLE 346
Query: 103 DAIRVFH-KMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGI-PPSVVSLNI 160
+A RVF +M + + +Y ++I + + +AI +EM + P V +
Sbjct: 347 EAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQP 406
Query: 161 LIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
L+++ K + ++ + + D TY LI LCR A LF EM +
Sbjct: 407 LLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQ 466
Query: 221 GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGI 257
+P H C + LLEE+KK +
Sbjct: 467 DITPR--------HRTC--------LLLLEEVKKKNM 487
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 165/324 (50%), Gaps = 16/324 (4%)
Query: 117 KFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCK--NKETIDS 174
K + +Y +DIL + R F MR +V+LN + K + + +
Sbjct: 118 KHSSDAYDMAVDILGKAKKWDRMKEFVERMR----GDKLVTLNTVAKIMRRFAGAGEWEE 173
Query: 175 ALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIH 234
A+ IF + G + ++ + L++ LC+ V +A+ + +++ +P+ T+ IH
Sbjct: 174 AVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTFNIFIH 232
Query: 235 GMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRP 294
G C+++ + EA+ ++EMK +G P V +Y+T++ C+ ++ E+L M + P
Sbjct: 233 GWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPP 292
Query: 295 NMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAAN-F 353
N +TY T+++ L + +F EA+ + RM+ G KP++ Y +I A ++A F
Sbjct: 293 NSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVF 352
Query: 354 IDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGI-SIEIDTFD 412
EM G+S + +T +N+++ C + + +A +L M + + + ++ T+
Sbjct: 353 RVEMPELGVSINTST-------YNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQ 405
Query: 413 CLIKCFCKRGDLNKAARILEEMIS 436
L++ KRGD+ + ++L+EM++
Sbjct: 406 PLLRSCFKRGDVVEVGKLLKEMVT 429
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 182/432 (42%), Gaps = 49/432 (11%)
Query: 13 ITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGL 72
++ LV +L+ +D ++ L AE G +H + + + L A ++ +
Sbjct: 85 LSDGLVHKLLHRFRDDWRSALGI-LKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEF 143
Query: 73 LERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVE 132
+ERM+ + +VT + + I R + +A+ +F ++ +F
Sbjct: 144 VERMRGDK-LVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEF------------------ 184
Query: 133 ENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSY 192
G+ + S+N+L+ LCK K ++ A + ++ + P+++
Sbjct: 185 -----------------GLEKNTESMNLLLDTLCKEKR-VEQARVVLLQLKSH-ITPNAH 225
Query: 193 TYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEM 252
T+ I+G C+ V EA EM+ GF P V++YT++I CQ + +L EM
Sbjct: 226 TFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEM 285
Query: 253 KKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKF 312
+ NG PN TY+T+M L +A+ + M +P+ + Y LI+ L + G+
Sbjct: 286 EANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRL 345
Query: 313 SEAVEILD-RMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGI-SPSRATWS 370
EA + M G+ N Y +I+ +C A + EM + +P
Sbjct: 346 EEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPD----- 400
Query: 371 LHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRG-ISIEIDTFDCLIKCFCKRGDLNKAAR 429
V + +++ D +L M T+ +S++ T+ LI+ C+ A
Sbjct: 401 --VHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYC 458
Query: 430 ILEEMISDGCVP 441
+ EEMIS P
Sbjct: 459 LFEEMISQDITP 470
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 109/263 (41%), Gaps = 39/263 (14%)
Query: 94 GYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPP 153
G+ + +R +A+ +M+ + SY T+I ++ + EM G PP
Sbjct: 233 GWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPP 292
Query: 154 SVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKEL 213
+ ++ ++ +L KE + AL++ M GC+PDS Y LI+ L R G + EA+ +
Sbjct: 293 NSITYTTIMSSLNAQKE-FEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERV 351
Query: 214 FN-EMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGI-EPNVFTYSTLM--- 268
F EM E G S + TY S+I C D +AI LL+EM+ + + P+V TY L+
Sbjct: 352 FRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSC 411
Query: 269 ---------------------------------DGLCKGGHSLQAMELLEMMVTKHNRPN 295
LC+ A L E M+++ P
Sbjct: 412 FKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPR 471
Query: 296 MVTYGTLINGLCKEGKFSEAVEI 318
T L+ + K+ A I
Sbjct: 472 HRTCLLLLEEVKKKNMHESAERI 494
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 86/190 (45%), Gaps = 4/190 (2%)
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYR-EMRKMGIPPSVVSLNIL 161
+A+RV +M+ K Y +I L ++ A +R EM ++G+ + + N +
Sbjct: 312 EALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSM 371
Query: 162 IKALCKNKETIDSALQIFHEMPNRG-CQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
I C + E D A+++ EM + C PD +TY L+ + G V E +L EM K
Sbjct: 372 IAMYCHHDEE-DKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTK 430
Query: 221 G-FSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQ 279
S TYT LI +C+++ A L EEM I P T L++ + K
Sbjct: 431 HHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHES 490
Query: 280 AMELLEMMVT 289
A + +M T
Sbjct: 491 AERIEHIMKT 500
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 295 NMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFI 354
N + L++ LCKE + +A +L +++ + PNA + I G+C A+ ++A I
Sbjct: 189 NTESMNLLLDTLCKEKRVEQARVVLLQLK-SHITPNAHTFNIFIHGWCKANRVEEALWTI 247
Query: 355 DEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCL 414
EM G P V + T+++ C + + +++ M G T+ +
Sbjct: 248 QEMKGHGFRPC-------VISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTI 300
Query: 415 IKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
+ + + +A R+ M GC PD ++ ++ L
Sbjct: 301 MSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTL 339
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 86/217 (39%), Gaps = 18/217 (8%)
Query: 43 SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPL 102
+NG + T+ ++S L A +F A + RMK+ C + R R
Sbjct: 287 ANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLE 346
Query: 103 DAIRVFH-KMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGI-PPSVVSLNI 160
+A RVF +M + + +Y ++I + + +AI +EM + P V +
Sbjct: 347 EAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQP 406
Query: 161 LIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
L+++ K + ++ + + D TY LI LCR A LF EM +
Sbjct: 407 LLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQ 466
Query: 221 GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGI 257
+P H C + LLEE+KK +
Sbjct: 467 DITPR--------HRTC--------LLLLEEVKKKNM 487
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/397 (20%), Positives = 172/397 (43%), Gaps = 31/397 (7%)
Query: 94 GYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPP 153
YG+ + +A ++ ++ + + T+ +Y +I ++RA EM+ + P
Sbjct: 164 AYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSP 223
Query: 154 SVVSL---NILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEA 210
+ + N I+ L K K + A+ +F M C+P + TY +IN + +
Sbjct: 224 KTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMS 283
Query: 211 KELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDG 270
+L+ EM P++ TYT+L++ + +A + E+++++G+EP+V+ Y+ LM+
Sbjct: 284 WKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMES 343
Query: 271 LCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPN 330
+ G+ A E+ +M P+ +Y +++ + G S+A + + M+ G+ P
Sbjct: 344 YSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPT 403
Query: 331 AGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQ--------- 381
+ ++S + A + EM G+ P + + ++ + Q
Sbjct: 404 MKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILA 463
Query: 382 ----GLCS----------NVDSPRAF-----QLYLSMRTRGISIEIDTFDCLIKCFCKRG 422
G C+ N+ F +L++ ++ + ++ T+ I + ++
Sbjct: 464 EMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKK 523
Query: 423 DLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
K + EEMI GC PD G V++ ++V
Sbjct: 524 LYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQV 560
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 143/297 (48%), Gaps = 1/297 (0%)
Query: 72 LLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILV 131
+ +RMK++ C T + + YG+ + + +++ +M Q K +Y +++
Sbjct: 251 VFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFA 310
Query: 132 EENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDS 191
E ++A + ++++ G+ P V N L+++ + +A +IF M + GC+PD
Sbjct: 311 REGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAA-EIFSLMQHMGCEPDR 369
Query: 192 YTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEE 251
+Y +++ R G S+A+ +F EM+ G +P++ ++ L+ ++ ++ + +++E
Sbjct: 370 ASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKE 429
Query: 252 MKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGK 311
M +NG+EP+ F +++++ + G + ++L M ++ TY LIN K G
Sbjct: 430 MSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGF 489
Query: 312 FSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRAT 368
E+ ++ + +P+ + I + Y +EM+ G +P T
Sbjct: 490 LERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGT 546
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/397 (20%), Positives = 172/397 (43%), Gaps = 31/397 (7%)
Query: 94 GYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPP 153
YG+ + +A ++ ++ + + T+ +Y +I ++RA EM+ + P
Sbjct: 186 AYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSP 245
Query: 154 SVVSL---NILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEA 210
+ + N I+ L K K + A+ +F M C+P + TY +IN + +
Sbjct: 246 KTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMS 305
Query: 211 KELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDG 270
+L+ EM P++ TYT+L++ + +A + E+++++G+EP+V+ Y+ LM+
Sbjct: 306 WKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMES 365
Query: 271 LCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPN 330
+ G+ A E+ +M P+ +Y +++ + G S+A + + M+ G+ P
Sbjct: 366 YSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPT 425
Query: 331 AGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQ--------- 381
+ ++S + A + EM G+ P + + ++ + Q
Sbjct: 426 MKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILA 485
Query: 382 ----GLCS----------NVDSPRAF-----QLYLSMRTRGISIEIDTFDCLIKCFCKRG 422
G C+ N+ F +L++ ++ + ++ T+ I + ++
Sbjct: 486 EMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKK 545
Query: 423 DLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
K + EEMI GC PD G V++ ++V
Sbjct: 546 LYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQV 582
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 143/297 (48%), Gaps = 1/297 (0%)
Query: 72 LLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILV 131
+ +RMK++ C T + + YG+ + + +++ +M Q K +Y +++
Sbjct: 273 VFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFA 332
Query: 132 EENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDS 191
E ++A + ++++ G+ P V N L+++ + +A +IF M + GC+PD
Sbjct: 333 REGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAA-EIFSLMQHMGCEPDR 391
Query: 192 YTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEE 251
+Y +++ R G S+A+ +F EM+ G +P++ ++ L+ ++ ++ + +++E
Sbjct: 392 ASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKE 451
Query: 252 MKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGK 311
M +NG+EP+ F +++++ + G + ++L M ++ TY LIN K G
Sbjct: 452 MSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGF 511
Query: 312 FSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRAT 368
E+ ++ + +P+ + I + Y +EM+ G +P T
Sbjct: 512 LERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGT 568
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 153/322 (47%), Gaps = 10/322 (3%)
Query: 5 TLFKWPKQITSSL------VEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMIS 58
T+ P +T+++ + L+ E++ + V F A S FR + + +
Sbjct: 25 TVVSEPTAVTAAISPPQKSLTSLVNGERNPKRIVEKFKKACE--SERFRTNIAVYDRTVR 82
Query: 59 RLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKF 118
RLVAA + E +LE K+ + E I YG+ +A +VF +M + K
Sbjct: 83 RLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKR 142
Query: 119 TQKSYLTVIDILVEENHVKRAIAFYREMR-KMGIPPSVVSLNILIKALCKNKETIDSALQ 177
+ S+ ++ + E+ K+ I P +VS N LIKALC+ K+++ A+
Sbjct: 143 SVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCE-KDSLPEAVA 201
Query: 178 IFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMC 237
+ E+ N+G +PD T+ TL+ G +E++ +M EK + + TY + + G+
Sbjct: 202 LLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLA 261
Query: 238 QSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMV 297
E + L E+K +G++P+VF+++ ++ G G +A + +V RP+
Sbjct: 262 NEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKA 321
Query: 298 TYGTLINGLCKEGKFSEAVEIL 319
T+ L+ +CK G F A+E+
Sbjct: 322 TFALLLPAMCKAGDFESAIELF 343
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 17/256 (6%)
Query: 143 YREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLC 202
YR+M K G ++SL ++A ++F EMPNR C+ ++ L++
Sbjct: 103 YRDMSKEGFAARIISL-------YGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYR 155
Query: 203 RMGSVSEAKELFNEMEEK-GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNV 261
+ELFNE+ K P +V+Y +LI +C+ D+L EA+ LL+E++ G++P++
Sbjct: 156 LSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDI 215
Query: 262 FTYST-LMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILD 320
T++T L+ KG L E+ MV K+ ++ TY + GL E K E V +
Sbjct: 216 VTFNTLLLSSYLKGQFEL-GEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFG 274
Query: 321 RMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVV 380
++ GLKP+ + +I G +A + E+V G P +AT++L ++
Sbjct: 275 ELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFAL-------LL 327
Query: 381 QGLCSNVDSPRAFQLY 396
+C D A +L+
Sbjct: 328 PAMCKAGDFESAIELF 343
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 89/212 (41%), Gaps = 7/212 (3%)
Query: 47 RHDHTTFGVMISRLVAANQFRSAEGLLERMKQENC---VVTEDILLTICRGYGRVHRPLD 103
+ D ++ +I L + A LL+ ++ + +VT + LL G+
Sbjct: 177 KPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFEL--- 233
Query: 104 AIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIK 163
++ KM + + ++Y + L E K + + E++ G+ P V S N +I+
Sbjct: 234 GEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIR 293
Query: 164 ALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFS 223
N+ +D A + E+ G +PD T+ L+ +C+ G A ELF E K +
Sbjct: 294 GSI-NEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYL 352
Query: 224 PSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKN 255
T L+ + + EA +++ K N
Sbjct: 353 VGQTTLQQLVDELVKGSKREEAEEIVKIAKTN 384
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 184/404 (45%), Gaps = 16/404 (3%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
G R ++ +++ + Q+ S ++ ++Q + + + DA
Sbjct: 75 GHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDA 134
Query: 105 IRVFHKMEDFQLKFTQKSYLTVID---ILVEENHVKRAIAFYREMRKMGIPPSVVSLNIL 161
++ KM++ L T +Y T+I I + + E + + P++ + N+L
Sbjct: 135 VQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVL 194
Query: 162 IKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNE---ME 218
++A CK K+ ++ A ++ +M G +PD+ TY T+ + G A+ E M+
Sbjct: 195 VQAWCKKKK-VEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMK 253
Query: 219 EKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSL 278
EK P+ T ++ G C+ + + +R + MK+ +E N+ +++L++G +
Sbjct: 254 EKA-KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRD 312
Query: 279 QAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKII 338
E+L +M + + +++TY T++N G +A ++ M G+KP+A Y +
Sbjct: 313 GIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILA 372
Query: 339 SGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLS 398
G+ A + A ++ +++ SR +V + TV+ G CSN A +++
Sbjct: 373 KGYVRAKEPKKAEELLETLIV----ESRP----NVVIFTTVISGWCSNGSMDDAMRVFNK 424
Query: 399 MRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPD 442
M G+S I TF+ L+ + + KA +L+ M G P+
Sbjct: 425 MCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPE 468
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 161/339 (47%), Gaps = 13/339 (3%)
Query: 119 TQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQI 178
T +S ++++L+E A ++ + + G PS++S L+ A+ K+ S I
Sbjct: 44 TVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQ-YGSISSI 102
Query: 179 FHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQ 238
E+ G + DS + +IN G++ +A + +M+E G +P+ TY +LI G
Sbjct: 103 VSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGI 162
Query: 239 SDNLGEAIRLLEEMKKNG---IEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPN 295
+ + LL+ M + G + PN+ T++ L+ CK +A E+++ M RP+
Sbjct: 163 AGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPD 222
Query: 296 MVTYGTLINGLCKEGKFSEA-VEILDRMRL-QGLKPNAGLYGKIISGFCAASSYQDAANF 353
VTY T+ ++G+ A E++++M + + KPN G ++ G+C +D F
Sbjct: 223 TVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRF 282
Query: 354 IDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDC 413
+ M R +L V N+++ G +D ++ M+ + ++ T+
Sbjct: 283 VRRM-----KEMRVEANLVV--FNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYST 335
Query: 414 LIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGG 452
++ + G + KAA++ +EM+ G PD + ++ G
Sbjct: 336 VMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKG 374
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 180/399 (45%), Gaps = 21/399 (5%)
Query: 44 NGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLD 103
+G + D F +I+ + A L +MK+ T T+ +GYG +P
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168
Query: 104 AIRVFHKM---EDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNI 160
+ + M + + +++ ++ ++ V+ A ++M + G+ P V+ N
Sbjct: 169 SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNT 228
Query: 161 LIKALCKNKETIDSALQIFHEMP-NRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEE 219
+ + ET+ + ++ +M +P+ T G ++ G CR G V + M+E
Sbjct: 229 IATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKE 288
Query: 220 KGFSPSVVTYTSLIHGMCQ---SDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGH 276
++V + SLI+G + D + E + L MK+ ++ +V TYST+M+ G+
Sbjct: 289 MRVEANLVVFNSLINGFVEVMDRDGIDEVLTL---MKECNVKADVITYSTVMNAWSSAGY 345
Query: 277 SLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGK 336
+A ++ + MV +P+ Y L G + + +A E+L+ + ++ +PN ++
Sbjct: 346 MEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTT 404
Query: 337 IISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLY 396
+ISG+C+ S DA ++M G+SP +++ T++ G +A ++
Sbjct: 405 VISGWCSNGSMDDAMRVFNKMCKFGVSP-------NIKTFETLMWGYLEVKQPWKAEEVL 457
Query: 397 LSMRTRGISIEIDTFDCLIKCFCKRG---DLNKAARILE 432
MR G+ E TF L + + G + NKA L+
Sbjct: 458 QMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALK 496
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 159/345 (46%), Gaps = 17/345 (4%)
Query: 21 LIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLE------ 74
L+K+EKD ++ + + +A+ + R D F + L F + LL+
Sbjct: 53 LLKSEKDPDRILEICRAAS--LTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENR 110
Query: 75 -RMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEE 133
+K E +L Y + + ++RVF +E F++ T KS ++ +
Sbjct: 111 PDLKSERFAAHAIVL------YAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVA 164
Query: 134 NHVKRAIAFYREMRKM-GIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSY 192
K A Y EM KM GI P + + N +IK C++ S+ I EM +G +P+S
Sbjct: 165 KDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSAS-SSYSIVAEMERKGIKPNSS 223
Query: 193 TYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEM 252
++G +I+G E ++ M+++G + V TY I +C+ EA LL+ M
Sbjct: 224 SFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGM 283
Query: 253 KKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKF 312
G++PN TYS L+ G C +A +L ++MV + +P+ Y TLI LCK G F
Sbjct: 284 LSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDF 343
Query: 313 SEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEM 357
A+ + + P+ + +++G S ++A I ++
Sbjct: 344 ETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQV 388
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 127/271 (46%), Gaps = 9/271 (3%)
Query: 126 VIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPN- 184
I + + N + ++ +R++ K I +V SLN L+ A C + A +++ EMP
Sbjct: 122 AIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFA-CLVAKDYKEAKRVYIEMPKM 180
Query: 185 RGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGE 244
G +PD TY +I C GS S + + EME KG P+ ++ +I G D E
Sbjct: 181 YGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDE 240
Query: 245 AIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLIN 304
++L MK G+ V TY+ + LCK S +A LL+ M++ +PN VTY LI+
Sbjct: 241 VGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIH 300
Query: 305 GLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISP 364
G C E F EA ++ M +G KP++ Y +I C ++ A + E +
Sbjct: 301 GFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESM------ 354
Query: 365 SRATWSLHVRMHNTVVQGLCSNVDSPRAFQL 395
W + ++V GL + A +L
Sbjct: 355 -EKNWVPSFSIMKSLVNGLAKDSKVEEAKEL 384
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 116/248 (46%), Gaps = 8/248 (3%)
Query: 213 LFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKK-NGIEPNVFTYSTLMDGL 271
+F ++E+ S +V + +L+ + + EA R+ EM K GIEP++ TY+ ++
Sbjct: 138 VFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVF 197
Query: 272 CKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNA 331
C+ G + + ++ M K +PN ++G +I+G E K E ++L M+ +G+
Sbjct: 198 CESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGV 257
Query: 332 GLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPR 391
Y I C ++A +D M+ G+ P+ T+S ++ G C+ D
Sbjct: 258 STYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYS-------HLIHGFCNEDDFEE 310
Query: 392 AFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMG 451
A +L+ M RG + + + LI CK GD A + +E + VP I ++
Sbjct: 311 AKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVN 370
Query: 452 GLWDRKKV 459
GL KV
Sbjct: 371 GLAKDSKV 378
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 80/149 (53%), Gaps = 3/149 (2%)
Query: 146 MRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMG 205
M+ G+ V + NI I++LCK K++ + A + M + G +P++ TY LI+G C
Sbjct: 248 MKDRGVNIGVSTYNIRIQSLCKRKKSKE-AKALLDGMLSAGMKPNTVTYSHLIHGFCNED 306
Query: 206 SVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEE-MKKNGIEPNVFTY 264
EAK+LF M +G P Y +LI+ +C+ + A+ L +E M+KN + P+
Sbjct: 307 DFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWV-PSFSIM 365
Query: 265 STLMDGLCKGGHSLQAMELLEMMVTKHNR 293
+L++GL K +A EL+ + K R
Sbjct: 366 KSLVNGLAKDSKVEEAKELIGQVKEKFTR 394
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 169/366 (46%), Gaps = 17/366 (4%)
Query: 72 LLERMKQENCVV---TEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVID 128
++E ++E C V T I+LT+C + + +A+ V K +F + +Y VI
Sbjct: 117 VIESYRKEECFVNVKTMRIVLTLC---NQANLADEALWVLRKFPEFNVCADTVAYNLVIR 173
Query: 129 ILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQ 188
+ ++ + A +EM +G+ P V++ +I C N ID A ++ EM C
Sbjct: 174 LFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYC-NAGKIDDAWRLAKEMSKHDCV 232
Query: 189 PDSYTYGTLINGLCRMGSVSEAKELFNEMEEKG----FSPSVVTYTSLIHGMCQSDNLGE 244
+S TY ++ G+C+ G + A EL EME++ SP+ VTYT +I C+ + E
Sbjct: 233 LNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEE 292
Query: 245 AIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAM-ELLEMMVTKHNRPNMVTYGTLI 303
A+ +L+ M G PN T L+ G+ + ++A+ +L++ +V + +
Sbjct: 293 ALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSAT 352
Query: 304 NGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGIS 363
L + ++ EA +I M ++G++P+ + C Y D E I
Sbjct: 353 VSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQE-----IE 407
Query: 364 PSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGD 423
++ +H ++ GLC +S A +L SM + + +++ + +I+ K GD
Sbjct: 408 KKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALKKTGD 467
Query: 424 LNKAAR 429
+ +R
Sbjct: 468 EDLMSR 473
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 163/346 (47%), Gaps = 41/346 (11%)
Query: 126 VIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR 185
++ I + + +K I YR K +V ++ I++ LC D AL + + P
Sbjct: 104 ILKIRAKPDLIKYVIESYR---KEECFVNVKTMRIVL-TLCNQANLADEALWVLRKFPEF 159
Query: 186 GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEA 245
D+ Y +I G ++ A L EM+ G P V+TYTS+I+G C + + +A
Sbjct: 160 NVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDA 219
Query: 246 IRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHN----RPNMVTYGT 301
RL +EM K+ N TYS +++G+CK G +A+ELL M + PN VTY
Sbjct: 220 WRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTL 279
Query: 302 LINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDA-ANFIDEMV-L 359
+I C++ + EA+ +LDRM +G PN +I G A + ID++V L
Sbjct: 280 VIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKL 339
Query: 360 GGISPSR----ATWSLHVRMHN----------TVVQGL------CSNVDSP--------R 391
GG+S S AT SL +RM +V+G+ CS+V
Sbjct: 340 GGVSLSECFSSATVSL-IRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLD 398
Query: 392 AFQLYLSMRTRGI--SIEIDTFDCLIKCFCKRGDLNKAARILEEMI 435
F LY + + + +I+ D L+ C++G+ +AA++ + M+
Sbjct: 399 CFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAKSML 444
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 135/305 (44%), Gaps = 11/305 (3%)
Query: 13 ITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGL 72
+ +LV +L + D+N A ++ G D T+ MI+ A + A L
Sbjct: 166 VAYNLVIRLFADKGDLNIADMLIKEMDCV---GLYPDVITYTSMINGYCNAGKIDDAWRL 222
Query: 73 LERMKQENCVVT----EDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQK-SYLTVI 127
+ M + +CV+ IL +C+ G + R L+ + K + L +Y VI
Sbjct: 223 AKEMSKHDCVLNSVTYSRILEGVCKS-GDMERALELLAEMEKEDGGGLISPNAVTYTLVI 281
Query: 128 DILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGC 187
E+ V+ A+ M G P+ V+ +LI+ + +N E + + ++ ++ G
Sbjct: 282 QAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGG 341
Query: 188 QPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIR 247
S + + L RM EA+++F M +G P + + + +C + +
Sbjct: 342 VSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFL 401
Query: 248 LLEEMKKNGIEPNVFT--YSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING 305
L +E++K ++ + + ++ L+ GLC+ G+S +A +L + M+ K R + +I
Sbjct: 402 LYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEA 461
Query: 306 LCKEG 310
L K G
Sbjct: 462 LKKTG 466
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 77/163 (47%), Gaps = 11/163 (6%)
Query: 295 NMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFI 354
+ V Y +I +G + A ++ M GL P+ Y +I+G+C A DA
Sbjct: 164 DTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLA 223
Query: 355 DEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRG----ISIEIDT 410
EM S+ L+ ++ +++G+C + D RA +L M IS T
Sbjct: 224 KEM-------SKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVT 276
Query: 411 FDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
+ +I+ FC++ + +A +L+ M + GC+P++ V++ G+
Sbjct: 277 YTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGV 319
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 159/351 (45%), Gaps = 8/351 (2%)
Query: 10 PKQITSSLVEQLIKAEKDINKAVLMFDSA-TAEYSNGFRHDHTTFGVMISRLVAANQFRS 68
P SL+ L+ E+D F A AE+ FR + + + RL AA +F
Sbjct: 34 PSPPKPSLI-TLVNDERDPKFITEKFKKACQAEW---FRKNIAVYERTVRRLAAAKKFEW 89
Query: 69 AEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVID 128
E +LE + + E + I YGRV +A +VF +M + K T S+ +++
Sbjct: 90 VEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLN 149
Query: 129 ILVEENHVKRAIAFYREMR-KMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGC 187
V ++E+ K+ I P V S N LIK LC K + A+ + E+ N+G
Sbjct: 150 ACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLC-GKGSFTEAVALIDEIENKGL 208
Query: 188 QPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIR 247
+PD T+ L++ G E ++++ M EK + +Y + + G+ + E +
Sbjct: 209 KPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVS 268
Query: 248 LLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLC 307
L +++K N ++P+VFT++ ++ G G +A+ + + RP + +L+ +C
Sbjct: 269 LFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAIC 328
Query: 308 KEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMV 358
K G A E+ + + L + + +++ S QD A I E+
Sbjct: 329 KAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSK-QDEAEEIVELA 378
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 141/313 (45%), Gaps = 22/313 (7%)
Query: 121 KSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFH 180
K + V +IL E+N Y M K G +++L + ++A ++F
Sbjct: 85 KKFEWVEEILEEQNK-------YPNMSKEGFVARIINLYGRVGMF-------ENAQKVFD 130
Query: 181 EMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK-GFSPSVVTYTSLIHGMCQS 239
EMP R C+ + ++ L+N + +F E+ K P V +Y +LI G+C
Sbjct: 131 EMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGK 190
Query: 240 DNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTY 299
+ EA+ L++E++ G++P+ T++ L+ G + ++ MV K+ + ++ +Y
Sbjct: 191 GSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSY 250
Query: 300 GTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVL 359
+ GL E K E V + D+++ LKP+ + +I GF + +A + E+
Sbjct: 251 NARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEK 310
Query: 360 GGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFC 419
G P + + N+++ +C D A++L + + + ++ ++
Sbjct: 311 NGCRPLKFVF-------NSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALV 363
Query: 420 KRGDLNKAARILE 432
K ++A I+E
Sbjct: 364 KGSKQDEAEEIVE 376
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 133/291 (45%), Gaps = 11/291 (3%)
Query: 164 ALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFS 223
A K E ++ L+ ++ PN + +IN R+G A+++F+EM E+
Sbjct: 82 AAAKKFEWVEEILEEQNKYPNMSKEG---FVARIINLYGRVGMFENAQKVFDEMPERNCK 138
Query: 224 PSVVTYTSLIHGMCQSDNLGEAIRLLEEMK-KNGIEPNVFTYSTLMDGLCKGGHSLQAME 282
+ +++ +L++ S + +E+ K IEP+V +Y+TL+ GLC G +A+
Sbjct: 139 RTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVA 198
Query: 283 LLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFC 342
L++ + K +P+ +T+ L++ +GKF E +I RM + +K + Y + G
Sbjct: 199 LIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLA 258
Query: 343 AASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTR 402
+ ++ + D++ + P T++ +++G S A Y +
Sbjct: 259 MENKSEEMVSLFDKLKGNELKPDVFTFT-------AMIKGFVSEGKLDEAITWYKEIEKN 311
Query: 403 GISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
G F+ L+ CK GDL A + +E+ + + D+ + V+ L
Sbjct: 312 GCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDAL 362
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/213 (19%), Positives = 83/213 (38%), Gaps = 36/213 (16%)
Query: 43 SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPL 102
+ G + DH TF +++ +F E + RM ++N V DI
Sbjct: 205 NKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKN--VKRDI--------------- 247
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
+SY + L EN + ++ + +++ + P V + +I
Sbjct: 248 ------------------RSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMI 289
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF 222
K ++ +D A+ + E+ GC+P + + +L+ +C+ G + A EL E+ K
Sbjct: 290 KGFV-SEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRL 348
Query: 223 SPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKN 255
++ + + EA ++E K N
Sbjct: 349 LVDEAVLQEVVDALVKGSKQDEAEEIVELAKTN 381
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 150/313 (47%), Gaps = 12/313 (3%)
Query: 126 VIDILVEENHVKRAIAFY-REMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPN 184
+I +L +E +K + R K +P +V+ +++ + L + I+ ++ + +
Sbjct: 240 MIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVL--EEMRIEESMSLLKRLLM 297
Query: 185 RGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGE 244
+ D+ Y ++ + G + A+++F+EM ++GFS + YT + C+ ++ E
Sbjct: 298 KNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKE 357
Query: 245 AIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLIN 304
A RLL EM+++G+ P T++ L+ G + G + +E E+MVT+ P+ + ++
Sbjct: 358 AERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVK 417
Query: 305 GLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISP 364
+ K + A EIL + +G P+ Y +I GF + A EM +SP
Sbjct: 418 SVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSP 477
Query: 365 SRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLS-MRTRGISIEIDTFDCLIKCFCKRGD 423
+ +++ GLC+ A + YL M+ R I D +D LIK F K GD
Sbjct: 478 G-------FEVFRSLIVGLCT-CGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGD 529
Query: 424 LNKAARILEEMIS 436
A R+ EMIS
Sbjct: 530 KTNADRVYNEMIS 542
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 94/476 (19%), Positives = 191/476 (40%), Gaps = 61/476 (12%)
Query: 13 ITSSLVEQLI---KAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSA 69
++ SL+E ++ K + +A+ F ++ ++ RH ++ + I LV A A
Sbjct: 75 LSDSLIETILLRFKNPETAKQALSFFHWSS--HTRNLRHGIKSYALTIHILVKARLLIDA 132
Query: 70 EGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDI 129
L+E ++ P D+ V ++ +++ S V D+
Sbjct: 133 RALIES--------------------SLLNSPPDSDLVDSLLDTYEI---SSSTPLVFDL 169
Query: 130 LVE----ENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR 185
LV+ +++ ++ + G SV++LN LI K+K D +I+ ++
Sbjct: 170 LVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSK-IDDLVWRIYECAIDK 228
Query: 186 GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEA 245
P+ T +I LC+ G + E +L + + K PSV+ TSL+ + + + E+
Sbjct: 229 RIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEES 288
Query: 246 IRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING 305
+ LL+ + + + YS ++ K G + A ++ + M+ + N Y +
Sbjct: 289 MSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRV 348
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPS 365
C++G EA +L M G+ P + +I GF + + + MV G+ PS
Sbjct: 349 CCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPS 408
Query: 366 RATWSLHVR----------------------------MHNTVVQGLCSNVDSPRAFQLYL 397
+ ++ V+ ++ +++G D +A +L+
Sbjct: 409 CSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFY 468
Query: 398 SMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
M R +S + F LI C G + + L+ M P+ I+D ++
Sbjct: 469 EMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAF 524
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/344 (20%), Positives = 142/344 (41%), Gaps = 68/344 (19%)
Query: 137 KRAIAFY------REMRKMGIPPSVVSLNILIKA--LCKNKETIDSALQIFHEMPNRGCQ 188
K+A++F+ R +R GI ++++IL+KA L + I+S+L + P+
Sbjct: 94 KQALSFFHWSSHTRNLRH-GIKSYALTIHILVKARLLIDARALIESSL--LNSPPDSDLV 150
Query: 189 P---DSY--------TYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMC 237
D+Y + L+ ++ + ++F + + GF+ SV+T +LIH
Sbjct: 151 DSLLDTYEISSSTPLVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIH--- 207
Query: 238 QSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMV 297
++ + +D L + E + K PN +
Sbjct: 208 ------------------------YSSKSKIDDL--------VWRIYECAIDKRIYPNEI 235
Query: 298 TYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEM 357
T +I LCKEG+ E V++LDR+ + P+ + ++ +++ + + +
Sbjct: 236 TIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRL 295
Query: 358 VLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKC 417
++ + +S+ VV D A +++ M RG S + ++
Sbjct: 296 LMKNMVVDTIGYSI-------VVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRV 348
Query: 418 FCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL----WDRK 457
C++GD+ +A R+L EM G P ++ ++GG W+ K
Sbjct: 349 CCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEK 392
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 151/316 (47%), Gaps = 26/316 (8%)
Query: 87 ILLTICRGYGRVHRPLDAIRVFHKM---EDFQLKFTQKSYLTVIDILVEENHVKRAIAFY 143
I T+ +GY + R D R+ M +D + +Y TV+ V + RA
Sbjct: 416 IYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVL 475
Query: 144 REMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMP-NRGCQPDSYTYGTLINGLC 202
EM +MG+P + ++ N+L+K CK + ID A + EM + G +PD +Y +I+G
Sbjct: 476 AEMARMGVPANRITYNVLLKGYCKQLQ-IDRAEDLLREMTEDAGIEPDVVSYNIIIDGCI 534
Query: 203 RMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNG-IEPNV 261
+ + A FNEM +G +P+ ++YT+L+ S A R+ +EM + ++ ++
Sbjct: 535 LIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDL 594
Query: 262 FTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAV----E 317
++ L++G C+ G A ++ M PN+ TYG+L NG+ + K +A+ E
Sbjct: 595 IAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKE 654
Query: 318 ILDRMRLQG---------------LKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGI 362
I +R ++ LKP+ GL + A+ ++ A I M GI
Sbjct: 655 IKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGI 714
Query: 363 SPSRATW-SLHVRMHN 377
P++ + ++V MH+
Sbjct: 715 PPNKTKYKKIYVEMHS 730
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 132/293 (45%), Gaps = 23/293 (7%)
Query: 49 DHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGR---VHRPLDAI 105
D T+ ++S V A A +L M + + +GY + + R D +
Sbjct: 451 DEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLL 510
Query: 106 RVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKAL 165
R ED ++ SY +ID + + A+AF+ EMR GI P+ +S L+KA
Sbjct: 511 R--EMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAF 568
Query: 166 CKNKETIDSALQIFHEMPNRG-CQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
+ + A ++F EM N + D + L+ G CR+G + +A+ + + M+E GF P
Sbjct: 569 AMSGQP-KLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYP 627
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
+V TY SL +G+ Q+ G+A+ L +E+K+ K S + +
Sbjct: 628 NVATYGSLANGVSQARKPGDALLLWKEIKERCAVKK------------KEAPSDSSSDPA 675
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKI 337
M+ +P+ TL + + F +A+EI+ M G+ PN Y KI
Sbjct: 676 PPML----KPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPPNKTKYKKI 724
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 139/354 (39%), Gaps = 51/354 (14%)
Query: 142 FYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGL 201
+ EM + P V++ N++IK LC + + + + ++G + T +L+
Sbjct: 258 LFEEMSEWDCEPDVLTYNVMIK-LCARVGRKELIVFVLERIIDKGIKVCMTTMHSLVAAY 316
Query: 202 CRMGSVSEAKELFNEMEEK-----------------------GFSPSVVTYTSLIHGMCQ 238
G + A+ + M EK G
Sbjct: 317 VGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDLKEKEEEEAEDDEDAFEDDEDSGYSA 376
Query: 239 SDNLGE--AIRLLEEMKKNGIEPN--------VFT-----YSTLMDGLCKGGHSLQAMEL 283
D + E + + +++ N ++P+ VF Y+TLM G K G +
Sbjct: 377 RDEVSEEGVVDVFKKLLPNSVDPSGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARM 436
Query: 284 LEMMVTKHNR---PNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISG 340
LE M + +R P+ VTY T+++ G A ++L M G+ N Y ++ G
Sbjct: 437 LEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKG 496
Query: 341 FCAASSYQDAANFIDEMVL-GGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSM 399
+C A + + EM GI P V +N ++ G DS A + M
Sbjct: 497 YCKQLQIDRAEDLLREMTEDAGIEPD-------VVSYNIIIDGCILIDDSAGALAFFNEM 549
Query: 400 RTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVP-DKGIWDVVMGG 452
RTRGI+ ++ L+K F G A R+ +EM++D V D W++++ G
Sbjct: 550 RTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEG 603
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 72/369 (19%), Positives = 137/369 (37%), Gaps = 63/369 (17%)
Query: 139 AIAFYREMRKMGIPPSVVSLNILIKALCKN-----KETIDSALQIFHEMPNRGCQ----- 188
A++ + M + G P V + + +L + +E+I + I + G Q
Sbjct: 172 AVSVIKSMIRSGYLPHVKAWTAAVASLSASGDDGPEESIKLFIAITRRVKRFGDQSLVGQ 231
Query: 189 --PDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAI 246
PD+ + ++N +G + +LF EM E P V+TY +I +C E I
Sbjct: 232 SRPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIK-LCARVGRKELI 290
Query: 247 R-LLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHN------------- 292
+LE + GI+ + T +L+ G A +++ M K
Sbjct: 291 VFVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAED 350
Query: 293 ----------RPNMVTYGTLINGLCKEGKFSE--AVEILDRMRLQGL------------- 327
+G + SE V++ ++ +
Sbjct: 351 LKEKEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFKKLLPNSVDPSGEPPLLPKVF 410
Query: 328 KPNAGLYGKIISGFCAASSYQDAANFIDEMVLG---GISPSRATWSLHVRMHNTVVQGLC 384
P++ +Y ++ G+ D A ++ M P T++ TVV
Sbjct: 411 APDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYT-------TVVSAFV 463
Query: 385 SNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISD-GCVPDK 443
+ RA Q+ M G+ T++ L+K +CK+ +++A +L EM D G PD
Sbjct: 464 NAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDV 523
Query: 444 GIWDVVMGG 452
+++++ G
Sbjct: 524 VSYNIIIDG 532
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 146/279 (52%), Gaps = 18/279 (6%)
Query: 162 IKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKG 221
+ LC ++T++S + +P+ D+ + L+ LC+ S+++A+ +++ ++ +
Sbjct: 154 VAKLCSVRQTVESFWKFKRLVPDFF---DTACFNALLRTLCQEKSMTDARNVYHSLKHQ- 209
Query: 222 FSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAM 281
F P + T+ L+ G + EA EEMK G++P+V TY++L+D CK +A
Sbjct: 210 FQPDLQTFNILLSGW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAY 266
Query: 282 ELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGF 341
+L++ M + P+++TY T+I GL G+ +A E+L M+ G P+ Y I F
Sbjct: 267 KLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNF 326
Query: 342 CAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRT 401
C A DA +DEMV G+SP+ T++L R+ L D R+++LY+ R
Sbjct: 327 CIARRLGDADKLVDEMVKKGLSPNATTYNLFFRV-------LSLANDLGRSWELYV--RM 377
Query: 402 RGISIEIDTFDC--LIKCFCKRGDLNKAARILEEMISDG 438
G +T C LIK F + ++ A R+ E+M+ G
Sbjct: 378 LGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG 416
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 109/224 (48%), Gaps = 1/224 (0%)
Query: 146 MRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMG 205
M+ G+ P VV+ N LI CK++E I+ A ++ +M PD TY T+I GL +G
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDRE-IEKAYKLIDKMREEEETPDVITYTTVIGGLGLIG 295
Query: 206 SVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYS 265
+A+E+ EM+E G P V Y + I C + LG+A +L++EM K G+ PN TY+
Sbjct: 296 QPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYN 355
Query: 266 TLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQ 325
L ++ EL M+ PN + LI + K A+ + + M ++
Sbjct: 356 LFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVK 415
Query: 326 GLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATW 369
G + + ++ C + ++A + EMV G PS ++
Sbjct: 416 GFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSF 459
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 152/357 (42%), Gaps = 48/357 (13%)
Query: 51 TTFGVMISRLVAANQFRSAEGLLERMKQENCVVTE----DILLTICRGYGRVHRPLDAI- 105
+TF +++S ++ A G+L R+ QE+ + + L++ C G+V DA+
Sbjct: 468 STFNMLMSVCASSQDIEGARGVL-RLVQESGMTADCKLYTTLISSCAKSGKV----DAMF 522
Query: 106 RVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKAL 165
VFH+M + ++ ++ +ID V +A Y +R + P V N LI A
Sbjct: 523 EVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISA- 581
Query: 166 CKNKETIDSALQIFHEMP--NRGCQPDSYTYGTLINGLCRMGSVSEAKE----------- 212
C +D A + EM PD + G L+ C G V AKE
Sbjct: 582 CGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIR 641
Query: 213 ------------------------LFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRL 248
++ +M+EK +P V +++LI + L EA +
Sbjct: 642 GTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGI 701
Query: 249 LEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCK 308
L++ K GI +YS+LM C +A+EL E + + RP + T LI LC+
Sbjct: 702 LQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCE 761
Query: 309 EGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPS 365
+ +A+E LD ++ GLKPN Y ++ ++ + + + G+SP+
Sbjct: 762 GNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPN 818
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/422 (19%), Positives = 167/422 (39%), Gaps = 48/422 (11%)
Query: 58 SRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLK 117
+RL+ + + LLE + Q + + + I + + + A++ + L
Sbjct: 408 NRLLRDGRIKDCISLLEDLDQRDLLDMDKIYHA---SFFKACKKQRAVKEAFRFTKLILN 464
Query: 118 FTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQ 177
T ++ ++ + ++ A R +++ G+ LI + C +D+ +
Sbjct: 465 PTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISS-CAKSGKVDAMFE 523
Query: 178 IFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMC 237
+FH+M N G + + +T+G LI+G R G V++A + + K P V + +LI
Sbjct: 524 VFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACG 583
Query: 238 QSDNLGEAIRLLEEMKK--NGIEPNVFTYSTLMDGLCKGGHSLQAMELLEM--------- 286
QS + A +L EMK + I+P+ + LM C G +A E+ +M
Sbjct: 584 QSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGT 643
Query: 287 --------------------------MVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILD 320
M K P+ V + LI+ EA IL
Sbjct: 644 PEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQ 703
Query: 321 RMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVV 380
+ QG++ Y ++ C A ++ A +++ + P+ +T N ++
Sbjct: 704 DAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTM-------NALI 756
Query: 381 QGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCV 440
LC P+A + ++T G+ T+ L+ ++ D + ++L + DG
Sbjct: 757 TALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVS 816
Query: 441 PD 442
P+
Sbjct: 817 PN 818
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/344 (19%), Positives = 149/344 (43%), Gaps = 31/344 (9%)
Query: 137 KRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGT 196
+RA+ K+ + P++ + N+L+ ++C + + I+ A + + G D Y T
Sbjct: 449 QRAVKEAFRFTKLILNPTMSTFNMLM-SVCASSQDIEGARGVLRLVQESGMTADCKLYTT 507
Query: 197 LINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNG 256
LI+ + G V E+F++M G ++ T+ +LI G ++ + +A ++
Sbjct: 508 LISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKN 567
Query: 257 IEPNVFTYSTLMDGLCKGGHSLQAMELL-EMMVTKHN-RPNMVTYGTLINGLCKEGKFSE 314
++P+ ++ L+ + G +A ++L EM H P+ ++ G L+ C G+
Sbjct: 568 VKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVER 627
Query: 315 AVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSL--- 371
A E+ + G++ +Y ++ + + A + +M ++P +S
Sbjct: 628 AKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALID 687
Query: 372 ---HVRM----------------------HNTVVQGLCSNVDSPRAFQLYLSMRTRGISI 406
H +M +++++ C+ D +A +LY +++ +
Sbjct: 688 VAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRP 747
Query: 407 EIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVM 450
I T + LI C+ L KA L+E+ + G P+ + ++M
Sbjct: 748 TISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLM 791
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 105/270 (38%), Gaps = 43/270 (15%)
Query: 43 SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTED-----ILLTICRGYGR 97
S + D F +IS + A +L MK E + D L+ C G+
Sbjct: 565 SKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQ 624
Query: 98 VHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVS 157
V R + ++ HK + ++ T + Y ++ + A + Y++M++ + P V
Sbjct: 625 VERAKEVYQMIHK---YGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVF 681
Query: 158 LNILIK----------------------------------ALCKNKETIDSALQIFHEMP 183
+ LI C N + AL+++ ++
Sbjct: 682 FSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIK 741
Query: 184 NRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLG 243
+ +P T LI LC + +A E +E++ G P+ +TY+ L+ + D+
Sbjct: 742 SIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFE 801
Query: 244 EAIRLLEEMKKNGIEPNVFTYSTLMDGLCK 273
+ +LL + K +G+ PN+ + LCK
Sbjct: 802 VSFKLLSQAKGDGVSPNLIMCRCIT-SLCK 830
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 127/258 (49%), Gaps = 6/258 (2%)
Query: 90 TICRGYGRVHRPLDAIRVFHKMEDFQLKFT--QKSYLTVID--ILVEENHVKRAIAFYRE 145
++ + YG + D +++F + Q F + ++L ++ ++ +
Sbjct: 90 SVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNL 149
Query: 146 MRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMG 205
M G+ P V+ +I +++LC+ +D A + E+ + PD+YTY L+ LC+
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGR-VDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCK 208
Query: 206 SVSEAKELFNEMEEK-GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTY 264
+ E +EM + P +V++T LI +C S NL EA+ L+ ++ G +P+ F Y
Sbjct: 209 DLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLY 268
Query: 265 STLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRL 324
+T+M G C +A+ + + M + P+ +TY TLI GL K G+ EA L M
Sbjct: 269 NTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVD 328
Query: 325 QGLKPNAGLYGKIISGFC 342
G +P+ Y +++G C
Sbjct: 329 AGYEPDTATYTSLMNGMC 346
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 119/234 (50%), Gaps = 9/234 (3%)
Query: 153 PSVVSLNILIKALCKNKET-IDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAK 211
P + IL+ C+ ++ I + ++ + M N G +PD T + LC G V EAK
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAK 179
Query: 212 ELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKN-GIEPNVFTYSTLMDG 270
+L E+ EK P TY L+ +C+ +L ++EM+ + ++P++ +++ L+D
Sbjct: 180 DLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDN 239
Query: 271 LCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPN 330
+C + +AM L+ + +P+ Y T++ G C K SEAV + +M+ +G++P+
Sbjct: 240 VCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD 299
Query: 331 AGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLC 384
Y +I G A ++A ++ MV G P AT++ +++ G+C
Sbjct: 300 QITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYT-------SLMNGMC 346
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 106/206 (51%), Gaps = 2/206 (0%)
Query: 106 RVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKAL 165
RV + M + L+ Q + + L E V A +E+ + PP + N L+K L
Sbjct: 145 RVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHL 204
Query: 166 CKNKETIDSALQIFHEMPNR-GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
CK K+ + + EM + +PD ++ LI+ +C ++ EA L +++ GF P
Sbjct: 205 CKCKD-LHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKP 263
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
Y +++ G C EA+ + ++MK+ G+EP+ TY+TL+ GL K G +A L
Sbjct: 264 DCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYL 323
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEG 310
+ MV P+ TY +L+NG+C++G
Sbjct: 324 KTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 122/265 (46%), Gaps = 12/265 (4%)
Query: 194 YGTLINGLCRMGSVSEAKELFNEM--EEKGFSPSVVTYTSLIHGMCQSDN--LGEAIRLL 249
+ +++ + V++ +LF + + F P T+ L+ C++ + + R+L
Sbjct: 88 HNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVL 147
Query: 250 EEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKE 309
M NG+EP+ T + LC+ G +A +L++ + KH+ P+ TY L+ LCK
Sbjct: 148 NLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKC 207
Query: 310 GKFSEAVEILDRMRLQ-GLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRAT 368
E +D MR +KP+ + +I C + + ++A + ++ G P
Sbjct: 208 KDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPD--- 264
Query: 369 WSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAA 428
++NT+++G C+ A +Y M+ G+ + T++ LI K G + +A
Sbjct: 265 ----CFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEAR 320
Query: 429 RILEEMISDGCVPDKGIWDVVMGGL 453
L+ M+ G PD + +M G+
Sbjct: 321 MYLKTMVDAGYEPDTATYTSLMNGM 345
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 171/356 (48%), Gaps = 13/356 (3%)
Query: 49 DHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVF 108
D + +MI L +F A L+ M + + + L + R Y + AIR F
Sbjct: 154 DQKSCDLMIWVLGNHQKFNIAWCLIRDMFNVSKDTRKAMFLMMDR-YAAANDTSQAIRTF 212
Query: 109 HKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKN 168
M+ F+ +++ ++ L H+++A F +K+ P V N+++ C
Sbjct: 213 DIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASKKL-FPVDVEGFNVILNGWCNI 271
Query: 169 KETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVT 228
+ A +I+ EM N P+ +Y +I+ ++G++ ++ L++EM+++G +P +
Sbjct: 272 WTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEV 331
Query: 229 YTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMV 288
Y SL++ + + D EA++L++++ + G++P+ TY++++ LC+ G A +L M+
Sbjct: 332 YNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMI 391
Query: 289 TKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQ 348
+++ P + T+ + + F + +E+L +M++ L P + I+ +
Sbjct: 392 SENLSPTVDTFHAFLEAV----NFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPE 447
Query: 349 DAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGI 404
+A EM I + A ++ +QGL S +A ++Y M+++G
Sbjct: 448 NALKIWAEMDRFEIVANPA-------LYLATIQGLLSCGWLEKAREIYSEMKSKGF 496
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 117/285 (41%), Gaps = 48/285 (16%)
Query: 175 ALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIH 234
A++ F M P + L+ LCR G + +A+E F +K F V + +++
Sbjct: 208 AIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEE-FMLASKKLFPVDVEGFNVILN 266
Query: 235 GMCQ-SDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNR 293
G C ++ EA R+ EM I PN +YS ++ K G+ ++ L + M +
Sbjct: 267 GWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLA 326
Query: 294 PNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANF 353
P + Y +L+ L +E F EA++++ ++ +GLKP++ Y
Sbjct: 327 PGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTY------------------- 367
Query: 354 IDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDC 413
N++++ LC A + +M + +S +DTF
Sbjct: 368 -----------------------NSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHA 404
Query: 414 LIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKK 458
++ + K +L +M P + + +++G L+ K+
Sbjct: 405 FLEAV----NFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQ 445
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 116/233 (49%), Gaps = 2/233 (0%)
Query: 134 NHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPN-RGCQPDSY 192
N + R+I +R + + IP +V SLN L+ A C + A +++ EMP G +PD
Sbjct: 125 NMLDRSIQTFRNLEQYEIPRTVKSLNALLFA-CLMAKDYKEANRVYLEMPKMYGIEPDLE 183
Query: 193 TYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEM 252
TY +I LC GS S + + EME K P+ ++ +I G + + E +++ M
Sbjct: 184 TYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMM 243
Query: 253 KKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKF 312
+ G+ V TY+ ++ LCK S +A L++ +++ RPN VTY LI+G C E
Sbjct: 244 DEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENL 303
Query: 313 SEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPS 365
EA+ + + M G KP++ Y +I C ++ A E + PS
Sbjct: 304 DEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPS 356
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 160/352 (45%), Gaps = 17/352 (4%)
Query: 11 KQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAE 70
KQ S L+K+E + ++ + + S + S + D F V + L F +
Sbjct: 38 KQKKSRDTLSLLKSENNPDRILEICRSTS--LSPDYHVDRIIFSVAVVTLAREKHFVAVS 95
Query: 71 GLLERM-------KQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSY 123
LL+ K E+ V IL YGR + +I+ F +E +++ T KS
Sbjct: 96 QLLDGFIQNQPDPKSESFAVRAIIL------YGRANMLDRSIQTFRNLEQYEIPRTVKSL 149
Query: 124 LTVIDILVEENHVKRAIAFYREMRKM-GIPPSVVSLNILIKALCKNKETIDSALQIFHEM 182
++ + K A Y EM KM GI P + + N +I+ LC++ T S+ I EM
Sbjct: 150 NALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTS-SSYSIVAEM 208
Query: 183 PNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNL 242
+ +P + ++G +I+G + E +++ M+E G V TY +I +C+
Sbjct: 209 ERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKS 268
Query: 243 GEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTL 302
EA L++ + + PN TYS L+ G C + +AM L E+MV +P+ Y TL
Sbjct: 269 AEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTL 328
Query: 303 INGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFI 354
I+ LCK G F A+ + + P+ + +++G + S +A I
Sbjct: 329 IHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELI 380
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 122/276 (44%), Gaps = 11/276 (3%)
Query: 188 QPDSYTYGTLINGLC---RMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGE 244
QPD + + + R + + + F +E+ +V + +L+ + + E
Sbjct: 105 QPDPKSESFAVRAIILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKE 164
Query: 245 AIRLLEEMKK-NGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLI 303
A R+ EM K GIEP++ TY+ ++ LC+ G + + ++ M K +P ++G +I
Sbjct: 165 ANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMI 224
Query: 304 NGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGIS 363
+G KE KF E +++ M G+ Y +I C +A ID ++ +
Sbjct: 225 DGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMR 284
Query: 364 PSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGD 423
P+ T+SL ++ G CS + A L+ M G + + + LI C CK GD
Sbjct: 285 PNSVTYSL-------LIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGD 337
Query: 424 LNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
A + E + VP + ++ GL R KV
Sbjct: 338 FETALILCRESMEKNWVPSFSVMKWLVNGLASRSKV 373
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 1/210 (0%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
G D T+ MI L + S+ ++ M+++ T + G+ + + +
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEV 236
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
+V M++F + +Y +I L + A A + + P+ V+ ++LI
Sbjct: 237 RKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHG 296
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
C ++E +D A+ +F M G +PDS Y TLI+ LC+ G A L E EK + P
Sbjct: 297 FC-SEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVP 355
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKK 254
S L++G+ + EA L+ +K+
Sbjct: 356 SFSVMKWLVNGLASRSKVDEAKELIAVVKE 385
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 138/312 (44%), Gaps = 17/312 (5%)
Query: 150 GIPPSVVSLNILIKALCKNKETIDSALQIFHEMP--NRGCQPDSYTYGTLINGLCRMGSV 207
G P + N++I L ++ + S L + H + + P Y L+N LC + V
Sbjct: 120 GFIPDERTCNVIIARLLYSRSPV-STLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRV 178
Query: 208 SEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTL 267
+A +L +M +G P VVT+T+LI G C+ L A ++ +EM+ GI PN T S L
Sbjct: 179 IDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVL 238
Query: 268 MDGLCK-----GGHSLQAMELLEMMVTKHNRP-NMVTYGTLINGLCKEGKFSEAVEILDR 321
+ G K G L EL E M + + + L++ +C+EG F++ EI +
Sbjct: 239 IGGFLKMRDVETGRKLMK-ELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAEN 297
Query: 322 MRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQ 381
M L YG +I C AA + M G+ P R ++ N ++
Sbjct: 298 MSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSY-------NAIIH 350
Query: 382 GLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVP 441
GLC + RA+QL T+ L++ CK D KA +LE M+
Sbjct: 351 GLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGAD 410
Query: 442 DKGIWDVVMGGL 453
I+++ + GL
Sbjct: 411 RTRIYNIYLRGL 422
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 103/447 (23%), Positives = 182/447 (40%), Gaps = 50/447 (11%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLL----ERMKQEN-----CVVTEDILLTICR-G 94
G R + T V+I + + L+ E MK E +++ ++CR G
Sbjct: 227 GIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREG 286
Query: 95 YGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVE--ENHVKRAIAFYREMRKMGIP 152
Y D + M + + +Y +ID L NH I + M+ G+
Sbjct: 287 YFN-----DIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYI--MKSKGLK 339
Query: 153 PSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKE 212
P S N +I LCK+ + A Q+ E P YTY L+ LC+ +A+
Sbjct: 340 PRRTSYNAIIHGLCKDGGCM-RAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARN 398
Query: 213 LFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLC 272
+ M K + Y + G+C DN E + +L M + P+ +T +T+++GLC
Sbjct: 399 VLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLC 458
Query: 273 KGGHSLQAMELLE-MMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDR-MRLQGLKPN 330
K G AM++L+ MM K P+ VT T++ GL +G+ EA+++L+R M +KP
Sbjct: 459 KMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPG 518
Query: 331 AGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVR---------------- 374
Y +I G +A + ++ ++ T+++ +
Sbjct: 519 VVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWD 578
Query: 375 ------------MHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRG 422
++ ++GLC + A + G + ++ +I + G
Sbjct: 579 DVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSG 638
Query: 423 DLNKAARILEEMISDGCVPDKGIWDVV 449
+A +ILEEM +G PD W ++
Sbjct: 639 LKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 113/240 (47%), Gaps = 7/240 (2%)
Query: 153 PSVVSLNILIKALCKNKETIDSALQIFHEM-PNRGCQPDSYTYGTLINGLCRMGSVSEAK 211
P +LN +I LCK +D A+++ +M + C PD+ T T++ GL G EA
Sbjct: 445 PDEYTLNTVINGLCKMGR-VDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEAL 503
Query: 212 ELFNE-MEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDG 270
++ N M E P VV Y ++I G+ + EA+ + +++K + + TY+ ++DG
Sbjct: 504 DVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDG 563
Query: 271 LCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPN 330
LC A + + ++ R + Y + GLC+ G S+A L + G PN
Sbjct: 564 LCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPN 623
Query: 331 AGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATW----SLHVRMHNTVVQGLCSN 386
Y +I+ + ++A ++EM G +P TW LH M TV + L SN
Sbjct: 624 VVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRILDKLHDSMDLTVERELISN 683
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 107/476 (22%), Positives = 197/476 (41%), Gaps = 62/476 (13%)
Query: 35 FDSATAEY----SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERM---KQE---NCVVT 84
FD A + ++GF D T V+I+RL+ + S G++ R+ K+E +
Sbjct: 106 FDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNY 165
Query: 85 EDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYR 144
++ +C ++R +DA ++ M + ++ T+I E ++ A +
Sbjct: 166 NRLMNQLCT----IYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFD 221
Query: 145 EMRKMGIPPSVVSLNILIKALCKNKET-----------------IDSALQI--FHEMPNR 185
EMR GI P+ ++L++LI K ++ D++++ F + +
Sbjct: 222 EMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDS 281
Query: 186 GCQPD--------------------SYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPS 225
C+ + YG +I+ LCR A + M+ KG P
Sbjct: 282 MCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPR 341
Query: 226 VVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLE 285
+Y ++IHG+C+ A +LLEE + P+ +TY LM+ LCK + +A +LE
Sbjct: 342 RTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLE 401
Query: 286 MMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAAS 345
+M+ K Y + GLC +E + +L M +P+ +I+G C
Sbjct: 402 LMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMG 461
Query: 346 SYQDAANFIDEMVLGGI-SPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQ-LYLSMRTRG 403
DA +D+M+ G +P T NTV+ GL + + A L M
Sbjct: 462 RVDDAMKVLDDMMTGKFCAPDAVTL-------NTVMCGLLAQGRAEEALDVLNRVMPENK 514
Query: 404 ISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
I + ++ +I+ K ++A + ++ D + +++ GL KV
Sbjct: 515 IKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKV 570
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 136/295 (46%), Gaps = 10/295 (3%)
Query: 161 LIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
+I +LC+ + A +I + M ++G +P +Y +I+GLC+ G A +L E E
Sbjct: 313 MIDSLCRYRRN-HGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEF 371
Query: 221 GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQA 280
F PS TY L+ +C+ + G+A +LE M + Y+ + GLC + +
Sbjct: 372 EFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEI 431
Query: 281 MELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGL-KPNAGLYGKIIS 339
+ +L M+ RP+ T T+INGLCK G+ +A+++LD M P+A ++
Sbjct: 432 LNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMC 491
Query: 340 GFCAASSYQDAANFIDE-MVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLS 398
G A ++A + ++ M I P V +N V++GL A ++
Sbjct: 492 GLLAQGRAEEALDVLNRVMPENKIKPG-------VVAYNAVIRGLFKLHKGDEAMSVFGQ 544
Query: 399 MRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
+ ++ + T+ +I C ++ A + +++I D ++ + GL
Sbjct: 545 LEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGL 599
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 131/297 (44%), Gaps = 10/297 (3%)
Query: 162 IKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKG 221
I ++C + D AL+I + RG +PDS ++I+ LC G EA F G
Sbjct: 61 IHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASG 120
Query: 222 FSPSV----VTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHS 277
F P V L++ LG RL+ K+ P++ Y+ LM+ LC
Sbjct: 121 FIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKE--FVPSLTNYNRLMNQLCTIYRV 178
Query: 278 LQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKI 337
+ A +L+ M + + P++VT+ TLI G C+ + A ++ D MR+ G++PN+ +
Sbjct: 179 IDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVL 238
Query: 338 ISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYL 397
I GF + + E L + S+ +V +C F++
Sbjct: 239 IGGFLKMRDVETGRKLMKE--LWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAE 296
Query: 398 SMR-TRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
+M +++E + +I C+ + AARI+ M S G P + ++ ++ GL
Sbjct: 297 NMSLCESVNVEF-AYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGL 352
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 139/294 (47%), Gaps = 8/294 (2%)
Query: 157 SLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNE 216
+ N +I+ L K E ++ A F + GC+ D+ TY L+ G +A E++
Sbjct: 245 AYNQVIQYLAK-AEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYES 303
Query: 217 MEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGH 276
ME+ TY +I + +S L A +L ++MK+ + P+ +S+L+D + K G
Sbjct: 304 MEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGR 363
Query: 277 SLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGK 336
+M++ M +RP+ + +LI+ K GK A+ + D M+ G +PN GLY
Sbjct: 364 LDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTM 423
Query: 337 IISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLY 396
II + + A +M G P+ +T+S + MH Q VDS A ++Y
Sbjct: 424 IIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQ-----VDS--AMKIY 476
Query: 397 LSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVM 450
SM G+ + ++ L+ + ++ A +IL EM + G D DV+M
Sbjct: 477 NSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLM 530
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 132/291 (45%), Gaps = 2/291 (0%)
Query: 49 DHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVF 108
D +T+ ++I L + + +A L ++MK+ + + ++ G+ R +++V+
Sbjct: 312 DGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVY 371
Query: 109 HKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKN 168
+M+ F + + ++++ID + + A+ + EM+K G P+ ++I++ K+
Sbjct: 372 MEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKS 431
Query: 169 KETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVT 228
+ ++ A+ +F +M G P TY L+ G V A +++N M G P + +
Sbjct: 432 GK-LEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSS 490
Query: 229 YTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMV 288
Y SL+ + + A ++L EMK G +V LM + L A++ L M
Sbjct: 491 YISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIYIKDASVDL-ALKWLRFMG 549
Query: 289 TKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIIS 339
+ + N L K G + A +L+ + K + LY I++
Sbjct: 550 SSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILA 600
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 132/310 (42%), Gaps = 15/310 (4%)
Query: 145 EMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQ-PDSYTYGTLINGLCR 203
++ K+ P++V + +K + + +D+AL +F + P Y L +GL +
Sbjct: 162 QLDKLQFVPNMVHITQSLKIV----KEVDAALSLFRWAKKQPWYLPSDECYVVLFDGLNQ 217
Query: 204 MGSVSEAKELFNEMEEKGFSP---SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPN 260
+ LF EM + S S Y +I + +++ L A ++ +++G + +
Sbjct: 218 GRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKID 277
Query: 261 VFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILD 320
TY+ LM G +A E+ E M + + TY +I L K G+ A ++
Sbjct: 278 TQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQ 337
Query: 321 RMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVV 380
+M+ + L+P+ ++ ++ A + EM G PS ++ V + ++
Sbjct: 338 QMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSA---TMFVSLIDSYA 394
Query: 381 QGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCV 440
+ +D+ A +L+ M+ G + +I+ K G L A + ++M G +
Sbjct: 395 KA--GKLDT--ALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFL 450
Query: 441 PDKGIWDVVM 450
P + ++
Sbjct: 451 PTPSTYSCLL 460
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/429 (20%), Positives = 187/429 (43%), Gaps = 41/429 (9%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
G R ++ +++ + Q+ S ++ ++Q + + + DA
Sbjct: 75 GHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDA 134
Query: 105 IRVFHKMEDFQLKFTQKSYLTVID---ILVEENHVKRAIAFYREMRKMGIPPSVVSLNIL 161
++ KM++ L T +Y T+I I + + E + + P++ + N+L
Sbjct: 135 VQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVL 194
Query: 162 IKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNE---ME 218
++A CK K+ ++ A ++ +M G +PD+ TY T+ + G A+ E M+
Sbjct: 195 VQAWCKKKK-VEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMK 253
Query: 219 EKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKG---- 274
EK P+ T ++ G C+ + + +R + MK+ +E N+ +++L++G +
Sbjct: 254 EKA-KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRD 312
Query: 275 ---------------------GHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFS 313
G+ +++L +M + + +++TY T++N G
Sbjct: 313 GIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYME 372
Query: 314 EAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHV 373
+A ++ M G+KP+A Y + G+ A + A ++ +++ SR +V
Sbjct: 373 KAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIV----ESRP----NV 424
Query: 374 RMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEE 433
+ TV+ G CSN A +++ M G+S I TF+ L+ + + KA +L+
Sbjct: 425 VIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQM 484
Query: 434 MISDGCVPD 442
M G P+
Sbjct: 485 MRGCGVKPE 493
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/421 (21%), Positives = 182/421 (43%), Gaps = 40/421 (9%)
Query: 44 NGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLD 103
+G + D F +I+ + A L +MK+ T T+ +GYG +P
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168
Query: 104 AIRVFHKM---EDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNI 160
+ + M + + +++ ++ ++ V+ A ++M + G+ P V+ N
Sbjct: 169 SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNT 228
Query: 161 LIKALCKNKETIDSALQIFHEMP-NRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEE 219
+ + ET+ + ++ +M +P+ T G ++ G CR G V + M+E
Sbjct: 229 IATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKE 288
Query: 220 KGFSPSVVTYTSLIHGMCQ---SDNLGEA----------------------IRLLEEMKK 254
++V + SLI+G + D + E +++L MK+
Sbjct: 289 MRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKE 348
Query: 255 NGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSE 314
++ +V TYST+M+ G+ +A ++ + MV +P+ Y L G + + +
Sbjct: 349 CNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKK 408
Query: 315 AVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVR 374
A E+L+ + ++ +PN ++ +ISG+C+ S DA ++M G+SP +++
Sbjct: 409 AEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSP-------NIK 460
Query: 375 MHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRG---DLNKAARIL 431
T++ G +A ++ MR G+ E TF L + + G + NKA L
Sbjct: 461 TFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINAL 520
Query: 432 E 432
+
Sbjct: 521 K 521
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 161/364 (44%), Gaps = 38/364 (10%)
Query: 119 TQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQI 178
T +S ++++L+E A ++ + + G PS++S L+ A+ K+ S I
Sbjct: 44 TVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQ-YGSISSI 102
Query: 179 FHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQ 238
E+ G + DS + +IN G++ +A + +M+E G +P+ TY +LI G
Sbjct: 103 VSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGI 162
Query: 239 SDNLGEAIRLLEEMKKNG---IEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPN 295
+ + LL+ M + G + PN+ T++ L+ CK +A E+++ M RP+
Sbjct: 163 AGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPD 222
Query: 296 MVTYGTLINGLCKEGKFSEA-VEILDRMRL-QGLKPNAGLYGKIISGFCAASSYQDAANF 353
VTY T+ ++G+ A E++++M + + KPN G ++ G+C +D F
Sbjct: 223 TVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRF 282
Query: 354 IDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVD------------------------- 388
+ M R +L V N+++ G +D
Sbjct: 283 VRRM-----KEMRVEANLVV--FNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGN 335
Query: 389 SPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDV 448
Q+ M+ + ++ T+ ++ + G + KAA++ +EM+ G PD + +
Sbjct: 336 QKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSI 395
Query: 449 VMGG 452
+ G
Sbjct: 396 LAKG 399
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 141/285 (49%), Gaps = 17/285 (5%)
Query: 13 ITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGL 72
T+S V ++A+ D + A+ +F + G++H+H + MI + + + E L
Sbjct: 73 FTNSDVVIALRAQSDPDLALDIFRWTAQQ--RGYKHNHEAYHTMIKQAITGKRNNFVETL 130
Query: 73 LERMKQENCVVTEDILLTICR-GYGRVHRPLDAIRVFHKM---EDFQLKFTQKSY----- 123
+E + C ++ + I R GR A V++KM +D + +
Sbjct: 131 IEEVIAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSL 190
Query: 124 ---LTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFH 180
+++ H R++ ++M+ G+ P LN++IKA K E +D A+++F
Sbjct: 191 LKRFNKLNVCYVYLHAVRSLT--KQMKSNGVIPDTFVLNMIIKAYAKCLE-VDEAIRVFK 247
Query: 181 EMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSD 240
EM G +P++YTY L+ G+C G V + + EM+ KG P+ Y LI +
Sbjct: 248 EMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMER 307
Query: 241 NLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLE 285
L EA+ ++ +M N + P++ TY+T++ LC+GG +A+E++E
Sbjct: 308 RLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVE 352
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 11/213 (5%)
Query: 154 SVVSLNILIKALCKNKETIDSALQIFHEM-PNRGCQPDSYTYGTLIN---------GLCR 203
SV N +I+ C K + A ++++M + +PD TY L++ +C
Sbjct: 142 SVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCY 201
Query: 204 MGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFT 263
+ + + L +M+ G P +I + + EAIR+ +EM G EPN +T
Sbjct: 202 V-YLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYT 260
Query: 264 YSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMR 323
YS L+ G+C+ G Q + + M K PN Y LI L E + EAVE++ M
Sbjct: 261 YSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDML 320
Query: 324 LQGLKPNAGLYGKIISGFCAASSYQDAANFIDE 356
L P+ Y +++ C +A ++E
Sbjct: 321 ANSLSPDMLTYNTVLTELCRGGRGSEALEMVEE 353
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 78/153 (50%), Gaps = 1/153 (0%)
Query: 68 SAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVI 127
+ L ++MK + +L I + Y + +AIRVF +M + + +Y ++
Sbjct: 206 AVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLV 265
Query: 128 DILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGC 187
+ E+ V + + FY+EM+ G+ P+ +LI +L + +D A+++ ++M
Sbjct: 266 KGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERR-LDEAVEVVYDMLANSL 324
Query: 188 QPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
PD TY T++ LCR G SEA E+ E +++
Sbjct: 325 SPDMLTYNTVLTELCRGGRGSEALEMVEEWKKR 357
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 186 GCQPDSYTYGTLINGLC-RMGSVSEAKELFNEMEEKGFS-PSVVTYTSLIHGMCQSDN-- 241
C+ Y +I C R + A +++N+M S P + TYT L+ + + N
Sbjct: 138 ACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKL 197
Query: 242 -----LGEAIR-LLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPN 295
A+R L ++MK NG+ P+ F + ++ K +A+ + + M + PN
Sbjct: 198 NVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPN 257
Query: 296 MVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFID 355
TY L+ G+C++G+ + + M+++G+ PN Y +I +A +
Sbjct: 258 AYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVY 317
Query: 356 EMVLGGISPSRATWSLHVRMHNTVVQGLC 384
+M+ +SP T+ NTV+ LC
Sbjct: 318 DMLANSLSPDMLTY-------NTVLTELC 339
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 130/275 (47%), Gaps = 8/275 (2%)
Query: 106 RVFHKMEDFQ-LKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMG------IPPSVVSL 158
RVF K++ + KF SY I + A++ ++EM++ P + +
Sbjct: 233 RVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTY 292
Query: 159 NILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEME 218
N LI LC + D AL ++ E+ G +PD+ TY LI G C+ + +A ++ EM+
Sbjct: 293 NSLIHVLCLFGKAKD-ALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQ 351
Query: 219 EKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSL 278
GF P + Y L+ G ++ + EA +L E+M + G+ + +TY+ L+DGL + G +
Sbjct: 352 YNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAE 411
Query: 279 QAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKII 338
L + K + +T+ + LC+EGK AV++++ M +G + ++
Sbjct: 412 AGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLL 471
Query: 339 SGFCAASSYQDAANFIDEMVLGGISPSRATWSLHV 373
GF + + + G + P+ W+ V
Sbjct: 472 IGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGV 506
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 100/469 (21%), Positives = 196/469 (41%), Gaps = 30/469 (6%)
Query: 2 GSRTLFKWPKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLV 61
G+R+L I+ +V Q+++ L F G++H T + + +
Sbjct: 44 GTRSLDANSIPISEPVVLQILRRNSIDPSKKLDFFRWCYSLRPGYKHSATAYSQIFRTVC 103
Query: 62 AANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQK 121
LL MK++ + + + + R + A+ V ME+
Sbjct: 104 RTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPS 163
Query: 122 SYLTVIDILVEENHVKRAIAFYREMRK---------------MGIPPSVVSLNILIKALC 166
Y +V+ LV+++ ++ A++ ++ + + P V++N L+ L
Sbjct: 164 VYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGL- 222
Query: 167 KNKETIDSALQIFHEMPN-RGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKG---- 221
+ + ++F ++ + + D+++Y I+G G + A LF EM+E+
Sbjct: 223 RRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYG 282
Query: 222 --FSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQ 279
F P + TY SLIH +C +A+ + +E+K +G EP+ TY L+ G CK
Sbjct: 283 SSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDD 342
Query: 280 AMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIIS 339
AM + M P+ + Y L++G K K +EA ++ ++M +G++ + Y +I
Sbjct: 343 AMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILID 402
Query: 340 GFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSM 399
G + ++ G T+S+ V LC A +L M
Sbjct: 403 GLFRNGRAEAGFTLFCDLKKKGQFVDAITFSI-------VGLQLCREGKLEGAVKLVEEM 455
Query: 400 RTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDV 448
TRG S+++ T L+ F K+G + ++++ + VP+ W+
Sbjct: 456 ETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNA 504
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/447 (20%), Positives = 183/447 (40%), Gaps = 54/447 (12%)
Query: 27 DINKAVLMFDSA---TAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVV 83
D++ A+ +F ++ Y + F D T+ +I L + + A + + +K
Sbjct: 263 DLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEP 322
Query: 84 TEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFY 143
+ +G + +R DA+R++ +M+ Y ++D ++ V A +
Sbjct: 323 DNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLF 382
Query: 144 REMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCR 203
+M + G+ S + NILI L +N ++ +F ++ +G D+ T+ + LCR
Sbjct: 383 EKMVQEGVRASCWTYNILIDGLFRNGRA-EAGFTLFCDLKKKGQFVDAITFSIVGLQLCR 441
Query: 204 MGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFT 263
G + A +L EME +GFS +VT +SL+ G + +L++ +++ + PNV
Sbjct: 442 EGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLR 501
Query: 264 YSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLIN-----GLCKEGKFSEAVE- 317
++ ++ K S K P + G+ ++ G +G +E V
Sbjct: 502 WNAGVEASLKRPQSKD----------KDYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSP 551
Query: 318 ----------ILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRA 367
+D++ Q +P K + G + +
Sbjct: 552 MEDDPWSSSPYMDQLAHQRNQP------KPLFGLARGQRVEAKPD--------------- 590
Query: 368 TWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGIS-IEIDTFDCLIKCFCKRGDLNK 426
S V M NT + S D A +L+ G++ + T++ ++ F K+G
Sbjct: 591 --SFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQT 648
Query: 427 AARILEEMISDGCVPDKGIWDVVMGGL 453
A +L++M + C D ++V++ GL
Sbjct: 649 ARGVLDQMFENFCAADIATYNVIIQGL 675
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 93/186 (50%), Gaps = 3/186 (1%)
Query: 125 TVIDILVEENHVKRAIAFYREMRKMGIPP-SVVSLNILIKALCKNKETIDSALQIFHEMP 183
T + I + + + A + MG+ + + N ++ + K K +A + +M
Sbjct: 599 TFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVK-KGYFQTARGVLDQMF 657
Query: 184 NRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLG 243
C D TY +I GL +MG A + + + ++G +V Y +LI+ + ++ L
Sbjct: 658 ENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLD 717
Query: 244 EAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLI 303
EA +L + MK NGI P+V +Y+T+++ K G +A + L+ M+ PN VT T++
Sbjct: 718 EATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT-DTIL 776
Query: 304 NGLCKE 309
+ L KE
Sbjct: 777 DYLGKE 782
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 4/186 (2%)
Query: 187 CQPDSYTY---GTLINGLCRMGSVSEAKELFNEMEEKGFSP-SVVTYTSLIHGMCQSDNL 242
+PDS+ T ++ G +S A +LF G + + TY S++ +
Sbjct: 587 AKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYF 646
Query: 243 GEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTL 302
A +L++M +N ++ TY+ ++ GL K G + A +L+ + + ++V Y TL
Sbjct: 647 QTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTL 706
Query: 303 INGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGI 362
IN L K + EA ++ D M+ G+ P+ Y +I A ++A ++ M+ G
Sbjct: 707 INALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGC 766
Query: 363 SPSRAT 368
P+ T
Sbjct: 767 LPNHVT 772
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 175/431 (40%), Gaps = 46/431 (10%)
Query: 44 NGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLD 103
NGF D + ++ + A + A L E+M QE + + G R R
Sbjct: 353 NGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEA 412
Query: 104 AIRVFHKMEDFQLKFTQKSYLTVIDI-LVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
+F ++ + +F +++ + L E ++ A+ EM G +V+++ L+
Sbjct: 413 GFTLFCDLKK-KGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLL 471
Query: 163 KALCKN-----KETIDSALQIFHEMPN-------------------RGCQPDSYTYGTLI 198
K KE + ++ + +PN + P + G+ +
Sbjct: 472 IGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFL 531
Query: 199 NGLCRMGSVSE--AKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNL-GEAIRLLEEMKKN 255
+ + +GS + + E + ME+ +S S L H Q L G A E K +
Sbjct: 532 DIMSMVGSEDDGASAEEVSPMEDDPWSSSPYM-DQLAHQRNQPKPLFGLARGQRVEAKPD 590
Query: 256 GIEPNVFTYSTLMDGLCKGGHSLQAMELLE----MMVTKHNRPNMVTYGTLINGLCKEGK 311
+ ++ + L L KG SL A +L E M VT TY ++++ K+G
Sbjct: 591 SFDVDMMN-TFLSIYLSKGDLSL-ACKLFEIFNGMGVTDLTS---YTYNSMMSSFVKKGY 645
Query: 312 FSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSL 371
F A +LD+M + Y II G A+ +D + G L
Sbjct: 646 FQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQG-------GYL 698
Query: 372 HVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARIL 431
+ M+NT++ L A QL+ M++ GI+ ++ +++ +I+ K G L +A + L
Sbjct: 699 DIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYL 758
Query: 432 EEMISDGCVPD 442
+ M+ GC+P+
Sbjct: 759 KAMLDAGCLPN 769
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 120/290 (41%), Gaps = 17/290 (5%)
Query: 186 GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEA 245
G + + Y + +CR G + E +L M+E G + L+ + +S A
Sbjct: 87 GYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESA 146
Query: 246 IRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNR------------ 293
+ +L+ M++ G N Y +++ L K A+ +L ++ +
Sbjct: 147 LGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIV 206
Query: 294 ---PNMVTYGTLINGLCKEGKFSEAVEILDRMR-LQGLKPNAGLYGKIISGFCAASSYQD 349
P V L+ GL + SE + ++++ ++ K + Y I GF
Sbjct: 207 SYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDA 266
Query: 350 AANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEID 409
A + EM S +++ + +N+++ LC + A ++ ++ G +
Sbjct: 267 ALSLFKEMKERS-SVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNS 325
Query: 410 TFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
T+ LI+ CK ++ A RI EM +G VPD +++ ++ G +KV
Sbjct: 326 TYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKV 375
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/329 (19%), Positives = 130/329 (39%), Gaps = 34/329 (10%)
Query: 150 GIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSE 209
G S + + + + +C+ + + M G D L++ L R G
Sbjct: 87 GYKHSATAYSQIFRTVCRTG-LLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFES 145
Query: 210 AKELFNEMEEKG--FSPSVVTYTSLIHGMCQSDNLGEAI----RLLEEMKKNGIE----- 258
A + + MEE G +PSV Y S++ + + L A+ +LLE + +
Sbjct: 146 ALGVLDYMEELGDCLNPSV--YDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRV 203
Query: 259 ------PNVFTYSTLMDGLCKGGHSLQAMELLEMMV-TKHNRPNMVTYGTLINGLCKEGK 311
P + L+ GL + + + E + K + + +Y I+G G
Sbjct: 204 IIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGD 263
Query: 312 FSEAVEILDRMRLQG------LKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPS 365
A+ + M+ + P+ Y +I C +DA DE+ + G P
Sbjct: 264 LDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPD 323
Query: 366 RATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLN 425
+T+ + ++QG C + A ++Y M+ G + ++CL+ K +
Sbjct: 324 NSTYRI-------LIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVT 376
Query: 426 KAARILEEMISDGCVPDKGIWDVVMGGLW 454
+A ++ E+M+ +G +++++ GL+
Sbjct: 377 EACQLFEKMVQEGVRASCWTYNILIDGLF 405
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 151/337 (44%), Gaps = 46/337 (13%)
Query: 9 WPKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRS 68
+P IT S + ++ +D +KA+ ++ S + ++ + + + RL + +F
Sbjct: 27 YPGAITMSKAKSKLRKVQDPDKALAIYKSVSNNSTSPLSSRYA-MELTVQRLAKSQRFSD 85
Query: 69 AEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVID 128
E L+E K + TE L T+ R YGR ++ D
Sbjct: 86 IEALIESHKNNPKIKTETFLSTLIRSYGRA--------------------------SMFD 119
Query: 129 ILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR--G 186
A+ + EM K+G P +VVS N L+ A C + + + Q+F E P R
Sbjct: 120 ---------HAMKMFEEMDKLGTPRTVVSFNALLAA-CLHSDLFERVPQLFDEFPQRYNN 169
Query: 187 CQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAI 246
PD +YG LI C G +A E+ +ME KG +++ +T+++ + ++ + EA
Sbjct: 170 ITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAE 229
Query: 247 RLLEEMKKNGIEPNVFTYST-LMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING 305
L EM G + + Y+ LM+ + ++ EL+E M + +P+ V+Y L+
Sbjct: 230 SLWIEMVNKGCDLDNTVYNVRLMNAAKESPERVK--ELMEEMSSVGLKPDTVSYNYLMTA 287
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFC 342
C +G SEA ++ + + +PNA + +I C
Sbjct: 288 YCVKGMMSEAKKVYEGLE----QPNAATFRTLIFHLC 320
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 127/291 (43%), Gaps = 17/291 (5%)
Query: 173 DSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYT-- 230
D AL I+ + N P S Y + + R+ ++ +E +P + T T
Sbjct: 47 DKALAIYKSVSNNSTSPLSSRYAMELT-VQRLAKSQRFSDIEALIESHKNNPKIKTETFL 105
Query: 231 -SLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVT 289
+LI ++ A+++ EEM K G V +++ L+ + +L +
Sbjct: 106 STLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQ 165
Query: 290 KHNR--PNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSY 347
++N P+ ++YG LI C GK +A+EI+ M ++G++ + I+
Sbjct: 166 RYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLV 225
Query: 348 QDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSP-RAFQLYLSMRTRGISI 406
+A + EMV G + +VR+ N + SP R +L M + G+
Sbjct: 226 DEAESLWIEMVNKGCDLDNTVY--NVRLMNAAKE-------SPERVKELMEEMSSVGLKP 276
Query: 407 EIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKG-IWDVVMGGLWDR 456
+ +++ L+ +C +G +++A ++ E + + I+ + + GL+D+
Sbjct: 277 DTVSYNYLMTAYCVKGMMSEAKKVYEGLEQPNAATFRTLIFHLCINGLYDQ 327
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 6/221 (2%)
Query: 142 FYREMRK-MGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLING 200
+REM + +G P+V S N+L++A C + + A +++ EM RG D Y T+I G
Sbjct: 267 IWREMEEEVGCSPNVYSYNVLMEAYCA-RGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGG 325
Query: 201 LCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPN 260
LC V +AKELF +M KG + +TY L++G C++ ++ + + EMK+ G E +
Sbjct: 326 LCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEAD 385
Query: 261 VFTYSTLMDGLCK---GGHSLQAMELLEMMVTKHN-RPNMVTYGTLINGLCKEGKFSEAV 316
T L++GLC G ++A ++++ V + P+ Y L+ LC++GK A+
Sbjct: 386 GLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRAL 445
Query: 317 EILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEM 357
I M +G KP+ Y I G+ + +A EM
Sbjct: 446 NIQAEMVGKGFKPSQETYRAFIDGYGIVGDEETSALLAIEM 486
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 145 EMRKM--GIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR-GCQPDSYTYGTLINGL 201
E +KM I P+ + N ++ + + ET + +I+ EM GC P+ Y+Y L+
Sbjct: 233 EAKKMIGKIKPNATTFNSMMVSFYREGET-EMVERIWREMEEEVGCSPNVYSYNVLMEAY 291
Query: 202 CRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNV 261
C G +SEA++++ EM+ +G +V Y ++I G+C + + +A L +M GIE
Sbjct: 292 CARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTC 351
Query: 262 FTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKE---GKFSEAVEI 318
TY L++G CK G + + M K + +T L+ GLC + + EA +I
Sbjct: 352 LTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADI 411
Query: 319 L-DRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATW 369
+ D +R P+ Y ++ C A N EMV G PS+ T+
Sbjct: 412 VKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETY 463
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 140/323 (43%), Gaps = 28/323 (8%)
Query: 148 KMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSV 207
+ G P V ++LIK+ C + + ID A+ + ++ +RG T LI + R
Sbjct: 157 RCGSAPFV--FDLLIKS-CLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGA 213
Query: 208 SEAKELFNEM---------EEKG----FSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKK 254
S +++ E+ E K P+ T+ S++ + R+ EM++
Sbjct: 214 SNGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEE 273
Query: 255 N-GIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFS 313
G PNV++Y+ LM+ C G +A ++ E M + ++V Y T+I GLC +
Sbjct: 274 EVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVV 333
Query: 314 EAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHV 373
+A E+ M L+G++ Y +++G+C A EM G T
Sbjct: 334 KAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTI---- 389
Query: 374 RMHNTVVQGLCSNVDSPRAFQ----LYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAAR 429
+V+GLC + D R + + ++R + ++ L+K C+ G +++A
Sbjct: 390 ---EALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALN 446
Query: 430 ILEEMISDGCVPDKGIWDVVMGG 452
I EM+ G P + + + G
Sbjct: 447 IQAEMVGKGFKPSQETYRAFIDG 469
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 131/309 (42%), Gaps = 47/309 (15%)
Query: 187 CQPDSYTYGTLINGLCRMGSVSEAKELF---------NEMEEK---------------GF 222
C D+++ TLI+ L R S A E+ +E E++ G
Sbjct: 101 CSHDTHSCSTLIHILSRSRLKSHASEIIRLALRLAATDEDEDRVLKVFRSLIKSYNRCGS 160
Query: 223 SPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCK-----GGHS 277
+P V + LI S + A+ ++ +++ GI + T + L+ + + G+
Sbjct: 161 APFV--FDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYK 218
Query: 278 L--QAMELLEMMVTKHNR------PNMVTYGTLINGLCKEGKFSEAVEILDRMRLQ-GLK 328
+ + L ++ V + + PN T+ +++ +EG+ I M + G
Sbjct: 219 MYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCS 278
Query: 329 PNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVD 388
PN Y ++ +CA +A +EM + G+ + +NT++ GLCSN +
Sbjct: 279 PNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVV-------YDIVAYNTMIGGLCSNFE 331
Query: 389 SPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDV 448
+A +L+ M +GI T++ L+ +CK GD++ + EM G D +
Sbjct: 332 VVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEA 391
Query: 449 VMGGLWDRK 457
++ GL D +
Sbjct: 392 LVEGLCDDR 400
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 79/193 (40%), Gaps = 15/193 (7%)
Query: 52 TFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKM 111
++ V++ A AE + E MK V T+ G + A +F M
Sbjct: 283 SYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDM 342
Query: 112 EDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKE- 170
++ T +Y +++ + V + YREM++ G +++ L++ LC +++
Sbjct: 343 GLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDG 402
Query: 171 --------TIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF 222
+ A++ P+R C Y L+ LC G + A + EM KGF
Sbjct: 403 QRVVEAADIVKDAVREAMFYPSRNC------YELLVKRLCEDGKMDRALNIQAEMVGKGF 456
Query: 223 SPSVVTYTSLIHG 235
PS TY + I G
Sbjct: 457 KPSQETYRAFIDG 469
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 78/140 (55%), Gaps = 1/140 (0%)
Query: 146 MRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMG 205
M + I P+ ++ N +I CK ++ +D A ++ M ++GC PD T+ TLING C+
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCK-QDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAK 59
Query: 206 SVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYS 265
V E+F EM +G + VTYT+LIHG CQ +L A LL EM G+ P+ T+
Sbjct: 60 RVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFH 119
Query: 266 TLMDGLCKGGHSLQAMELLE 285
++ GLC +A +LE
Sbjct: 120 CMLAGLCSKKELRKAFAILE 139
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 80/135 (59%)
Query: 189 PDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRL 248
P + TY ++I+G C+ V +AK + + M KG SP VVT+++LI+G C++ + + +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 249 LEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCK 308
EM + GI N TY+TL+ G C+ G A +LL M++ P+ +T+ ++ GLC
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 309 EGKFSEAVEILDRMR 323
+ + +A IL+ ++
Sbjct: 128 KKELRKAFAILEDLQ 142
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 78/137 (56%), Gaps = 1/137 (0%)
Query: 119 TQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQI 178
T +Y ++ID +++ V A M G P VV+ + LI CK K +D+ ++I
Sbjct: 9 TTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR-VDNGMEI 67
Query: 179 FHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQ 238
F EM RG ++ TY TLI+G C++G + A++L NEM G +P +T+ ++ G+C
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 239 SDNLGEAIRLLEEMKKN 255
L +A +LE+++K+
Sbjct: 128 KKELRKAFAILEDLQKS 144
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 74/134 (55%)
Query: 224 PSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMEL 283
P+ +TY S+I G C+ D + +A R+L+ M G P+V T+STL++G CK ME+
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 284 LEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCA 343
M + N VTY TLI+G C+ G A ++L+ M G+ P+ + +++G C+
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 344 ASSYQDAANFIDEM 357
+ A ++++
Sbjct: 128 KKELRKAFAILEDL 141
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 7/144 (4%)
Query: 252 MKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGK 311
M + I P TY++++DG CK A +L+ M +K P++VT+ TLING CK +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 312 FSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSL 371
+EI M +G+ N Y +I GFC A + ++EM+ G++P T+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITF-- 118
Query: 372 HVRMHNTVVQGLCSNVDSPRAFQL 395
+ ++ GLCS + +AF +
Sbjct: 119 -----HCMLAGLCSKKELRKAFAI 137
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 329 PNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVD 388
P Y +I GFC DA +D M G SP T+S T++ G C
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFS-------TLINGYCKAKR 60
Query: 389 SPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDV 448
+++ M RGI T+ LI FC+ GDL+ A +L EMIS G PD +
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 449 VMGGLWDRKKVR 460
++ GL +K++R
Sbjct: 121 MLAGLCSKKELR 132
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 7/141 (4%)
Query: 294 PNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANF 353
P +TY ++I+G CK+ + +A +LD M +G P+ + +I+G+C A +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 354 IDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDC 413
EM GI + T++ T++ G C D A L M + G++ + TF C
Sbjct: 68 FCEMHRRGIVANTVTYT-------TLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 414 LIKCFCKRGDLNKAARILEEM 434
++ C + +L KA ILE++
Sbjct: 121 MLAGLCSKKELRKAFAILEDL 141
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 110/449 (24%), Positives = 190/449 (42%), Gaps = 29/449 (6%)
Query: 21 LIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQEN 80
L K EK KA D + +G + +M+ LV + L MKQ
Sbjct: 96 LRKLEKYPEKAYYFLDWVLRD--SGLSPSTPLYSIMLRILVQQRSMKRFWMTLREMKQGG 153
Query: 81 CVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVK--R 138
+ ED TI + DA+ V H F + +++ ++V+ V K
Sbjct: 154 FYLDEDTYKTIYGELSKEKSKADAVAVAH----FYERMLKENAMSVVAGEVSAVVTKGDW 209
Query: 139 AIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGC----QPDSYTY 194
+ RE+++M + V+S N +I+ L + +E AL FH + G Q + TY
Sbjct: 210 SCEVERELQEMKL---VLSDNFVIRVLKELREHPLKALAFFHWVGGGGSSSGYQHSTVTY 266
Query: 195 GTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKK 254
+ L R SV+E + +EM+ G+ + TY + +S + E ++L E M
Sbjct: 267 NAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMD 326
Query: 255 NGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRP----NMVTYGTLINGLCKEG 310
+P++ S L+ L G ++L+ + K+ + Y + L G
Sbjct: 327 GPFKPSIQDCSLLLRYL--SGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVG 384
Query: 311 KFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWS 370
+F EA EI MR G +P+ Y +++ G C A ++A +D+M G P TW+
Sbjct: 385 RFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWT 444
Query: 371 LHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARI 430
+ ++QG C N + +A + +M +G I+ + D LI F A+
Sbjct: 445 I-------LIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIF 497
Query: 431 LEEMISDGCV-PDKGIWDVVMGGLWDRKK 458
L EM+ + V P + + +++ L KK
Sbjct: 498 LMEMVKNANVKPWQSTYKLLIDKLLKIKK 526
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 154/375 (41%), Gaps = 27/375 (7%)
Query: 73 LERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFH----KMEDFQLKFTQKSYLTVID 128
+ER QE +V D + R H PL A+ FH + + +Y +
Sbjct: 213 VERELQEMKLVLSDNFVIRVLKELREH-PLKALAFFHWVGGGGSSSGYQHSTVTYNAALR 271
Query: 129 ILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKET--IDSALQIFHEMPNRG 186
+L N V + EM+ G + L+ IK + +++ + ++++ M +
Sbjct: 272 VLARPNSVAEFWSVVDEMKTAGYD---MDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGP 328
Query: 187 CQPDSYTYGTLINGLCRMGSVSEAKELF----NEMEEKGFSPSVVTYTSLIHGMCQSDNL 242
+P L+ L GS + +L + E G S S Y + +
Sbjct: 329 FKPSIQDCSLLLRYLS--GSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRF 386
Query: 243 GEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTL 302
EA + + M+ G EP+ TYS L+ GLCK +A +L+ M + P++ T+ L
Sbjct: 387 DEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTIL 446
Query: 303 INGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVL-GG 361
I G CK + +A+ M +G ++ L +I GF + ++ A+ F+ EMV
Sbjct: 447 IQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNAN 506
Query: 362 ISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKR 421
+ P ++T+ L ++ L S A L M+ + + FD + F
Sbjct: 507 VKPWQSTYKL-------LIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFDGYLAKF--- 556
Query: 422 GDLNKAARILEEMIS 436
G L A + L+ + S
Sbjct: 557 GTLEDAKKFLDVLSS 571
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 144/318 (45%), Gaps = 15/318 (4%)
Query: 68 SAEGLLERMK----QENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQ---LKFTQ 120
+AE + RM+ + + + + IL T G + +A VF + D + LK Q
Sbjct: 199 NAEAIFRRMQSSGPEPSAITYQIILKTFVEG----DKFKEAEEVFETLLDEKKSPLKPDQ 254
Query: 121 KSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFH 180
K Y +I + + + ++A + M G+P S V+ N L+ KE +I+
Sbjct: 255 KMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS----KIYD 310
Query: 181 EMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSD 240
+M QPD +Y LI R EA +F EM + G P+ Y L+ S
Sbjct: 311 QMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISG 370
Query: 241 NLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYG 300
+ +A + + M+++ I P++++Y+T++ A + + + PN+VTYG
Sbjct: 371 MVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYG 430
Query: 301 TLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLG 360
TLI G K + +E+ ++MRL G+K N + I+ ++ A + EM
Sbjct: 431 TLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESC 490
Query: 361 GISPSRATWSLHVRMHNT 378
G+ P + ++ + + +T
Sbjct: 491 GVPPDQKAKNVLLSLAST 508
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 151/383 (39%), Gaps = 50/383 (13%)
Query: 72 LLERMKQENCVVTEDI-LLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDIL 130
+LE ++ +N +I L + YG++ A RV + SY +++
Sbjct: 132 ILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESY 191
Query: 131 VEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRG---C 187
A A +R M+ G PS ++ I++K + + A ++F + +
Sbjct: 192 GRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEG-DKFKEAEEVFETLLDEKKSPL 250
Query: 188 QPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIR 247
+PD Y +I + G+ +A+++F+ M KG S VTY SL M + E +
Sbjct: 251 KPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL---MSFETSYKEVSK 307
Query: 248 LLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLC 307
+ ++M+++ I+P+V +Y+ L+ + +A+ + E M+ RP Y L++
Sbjct: 308 IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFA 367
Query: 308 KEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRA 367
G +A + MR + P+ Y ++S + AS + A F
Sbjct: 368 ISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKF-------------- 413
Query: 368 TWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKA 427
+ ++ G I T+ LIK + K D+ K
Sbjct: 414 ----------------------------FKRIKVDGFEPNIVTYGTLIKGYAKANDVEKM 445
Query: 428 ARILEEMISDGCVPDKGIWDVVM 450
+ E+M G ++ I +M
Sbjct: 446 MEVYEKMRLSGIKANQTILTTIM 468
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 122/288 (42%), Gaps = 19/288 (6%)
Query: 170 ETIDSALQIFHEMPNRGCQ--PDSYTYGTLI--NGLCRMGSVSEAKELFNEMEEKGFSPS 225
E+ SA+ + + G Q P GTL+ L + VSE E FS
Sbjct: 88 ESTGSAVPVLRQYKTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSE- 146
Query: 226 VVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLE 285
+ + LI + N A R+L + K G PNV +Y+ LM+ +GG A +
Sbjct: 147 -IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFR 205
Query: 286 MMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRM---RLQGLKPNAGLYGKIISGFC 342
M + P+ +TY ++ + KF EA E+ + + + LKP+ +Y +I +
Sbjct: 206 RMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYK 265
Query: 343 AASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTR 402
A +Y+ A MV G+ S T++ + + + ++Y M+
Sbjct: 266 KAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKE----------VSKIYDQMQRS 315
Query: 403 GISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVM 450
I ++ ++ LIK + + +A + EEM+ G P +++++
Sbjct: 316 DIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILL 363
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 144/318 (45%), Gaps = 15/318 (4%)
Query: 68 SAEGLLERMK----QENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQ---LKFTQ 120
+AE + RM+ + + + + IL T G + +A VF + D + LK Q
Sbjct: 192 NAEAIFRRMQSSGPEPSAITYQIILKTFVEG----DKFKEAEEVFETLLDEKKSPLKPDQ 247
Query: 121 KSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFH 180
K Y +I + + + ++A + M G+P S V+ N L+ KE +I+
Sbjct: 248 KMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS----KIYD 303
Query: 181 EMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSD 240
+M QPD +Y LI R EA +F EM + G P+ Y L+ S
Sbjct: 304 QMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISG 363
Query: 241 NLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYG 300
+ +A + + M+++ I P++++Y+T++ A + + + PN+VTYG
Sbjct: 364 MVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYG 423
Query: 301 TLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLG 360
TLI G K + +E+ ++MRL G+K N + I+ ++ A + EM
Sbjct: 424 TLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESC 483
Query: 361 GISPSRATWSLHVRMHNT 378
G+ P + ++ + + +T
Sbjct: 484 GVPPDQKAKNVLLSLAST 501
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 151/383 (39%), Gaps = 50/383 (13%)
Query: 72 LLERMKQENCVVTEDI-LLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDIL 130
+LE ++ +N +I L + YG++ A RV + SY +++
Sbjct: 125 ILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESY 184
Query: 131 VEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRG---C 187
A A +R M+ G PS ++ I++K + + A ++F + +
Sbjct: 185 GRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEG-DKFKEAEEVFETLLDEKKSPL 243
Query: 188 QPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIR 247
+PD Y +I + G+ +A+++F+ M KG S VTY SL M + E +
Sbjct: 244 KPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL---MSFETSYKEVSK 300
Query: 248 LLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLC 307
+ ++M+++ I+P+V +Y+ L+ + +A+ + E M+ RP Y L++
Sbjct: 301 IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFA 360
Query: 308 KEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRA 367
G +A + MR + P+ Y ++S + AS + A F
Sbjct: 361 ISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKF-------------- 406
Query: 368 TWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKA 427
+ ++ G I T+ LIK + K D+ K
Sbjct: 407 ----------------------------FKRIKVDGFEPNIVTYGTLIKGYAKANDVEKM 438
Query: 428 ARILEEMISDGCVPDKGIWDVVM 450
+ E+M G ++ I +M
Sbjct: 439 MEVYEKMRLSGIKANQTILTTIM 461
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 122/288 (42%), Gaps = 19/288 (6%)
Query: 170 ETIDSALQIFHEMPNRGCQ--PDSYTYGTLI--NGLCRMGSVSEAKELFNEMEEKGFSPS 225
E+ SA+ + + G Q P GTL+ L + VSE E FS
Sbjct: 81 ESTGSAVPVLRQYKTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSE- 139
Query: 226 VVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLE 285
+ + LI + N A R+L + K G PNV +Y+ LM+ +GG A +
Sbjct: 140 -IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFR 198
Query: 286 MMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRM---RLQGLKPNAGLYGKIISGFC 342
M + P+ +TY ++ + KF EA E+ + + + LKP+ +Y +I +
Sbjct: 199 RMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYK 258
Query: 343 AASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTR 402
A +Y+ A MV G+ S T++ + + + ++Y M+
Sbjct: 259 KAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKE----------VSKIYDQMQRS 308
Query: 403 GISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVM 450
I ++ ++ LIK + + +A + EEM+ G P +++++
Sbjct: 309 DIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILL 356
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 165/394 (41%), Gaps = 15/394 (3%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
G D T ++ L E ++ M + + + E + I + Y + A
Sbjct: 405 GLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQA 464
Query: 105 IRVFHKMEDFQLK--FTQKSYLTVIDILVEEN-HVKRAIAFYREMRKMGIPPSVVSLNIL 161
+F E FQL + + VID+ E+ V+ FY + G V+ N++
Sbjct: 465 KALF---ERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVM 521
Query: 162 IKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKG 221
IKA K K + AL +F M N+G PD TY +L L + V EA+ + EM + G
Sbjct: 522 IKAYGKAK-LHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSG 580
Query: 222 FSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAM 281
P TY ++I + L +A+ L E M+K G++PN Y +L++G + G +A+
Sbjct: 581 CKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAI 640
Query: 282 ELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGF 341
+ MM + N + +LI K G EA + D+M+ P+ ++S
Sbjct: 641 QYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLC 700
Query: 342 CAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRT 401
+A + + + G S M+ G+ A ++ MR
Sbjct: 701 ADLGIVSEAESIFNALREKGTCD---VISFATMMYLYKGMGMLD-----EAIEVAEEMRE 752
Query: 402 RGISIEIDTFDCLIKCFCKRGDLNKAARILEEMI 435
G+ + +F+ ++ C+ G L++ + EM+
Sbjct: 753 SGLLSDCTSFNQVMACYAADGQLSECCELFHEML 786
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 179/410 (43%), Gaps = 16/410 (3%)
Query: 43 SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPL 102
+ G D T+ + L + A+ +L M C + Y R+
Sbjct: 543 NQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLS 602
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
DA+ ++ ME +K + Y ++I+ E V+ AI ++R M + G+ + + L LI
Sbjct: 603 DAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLI 662
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF 222
KA K ++ A +++ +M + PD ++++ +G VSEA+ +FN + EKG
Sbjct: 663 KAYSKVG-CLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG- 720
Query: 223 SPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAME 282
+ V+++ ++++ L EAI + EEM+++G+ + +++ +M G + E
Sbjct: 721 TCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCE 780
Query: 283 LL-EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISG- 340
L EM+V + + T+ TL L K G SEAV L + KP L I+
Sbjct: 781 LFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEA-KP---LATPAITAT 836
Query: 341 -FCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSM 399
F A Y A E+ G I + N V+ ++ D A + Y+ M
Sbjct: 837 LFSAMGLYAYALESCQELTSGEIPREHFAY-------NAVIYTYSASGDIDMALKAYMRM 889
Query: 400 RTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVV 449
+ +G+ +I T L+ + K G + R+ + P + ++ V
Sbjct: 890 QEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQSLFKAV 939
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 159/396 (40%), Gaps = 16/396 (4%)
Query: 51 TTFGVMISRLVAANQFRSAEGLLERMKQENC---VVTEDILLTICRGYGRVHRPLDAIRV 107
+TF +I A + A L M + VT + ++ C +G + +A +
Sbjct: 306 STFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLS---EAESL 362
Query: 108 FHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCK 167
KME+ + K+Y ++ + + ++ A+ +YR++RK+G+ P V+ ++ LC+
Sbjct: 363 LKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQ 422
Query: 168 NKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVV 227
K + + EM + D ++ ++ G V +AK LF + S
Sbjct: 423 RK-MVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSST- 480
Query: 228 TYTSLIHGMCQSDNLGEAIRLLEEMKK-NGIEPNVFTYSTLMDGLCKGGHSLQAMELLEM 286
T ++I + EA + + +G +V Y+ ++ K +A+ L +
Sbjct: 481 TLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKG 540
Query: 287 MVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASS 346
M + P+ TY +L L EA IL M G KP Y +I+ +
Sbjct: 541 MKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGL 600
Query: 347 YQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISI 406
DA + + M G+ P+ + +++ G + A Q + M G+
Sbjct: 601 LSDAVDLYEAMEKTGVKPNEVVY-------GSLINGFAESGMVEEAIQYFRMMEEHGVQS 653
Query: 407 EIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPD 442
LIK + K G L +A R+ ++M PD
Sbjct: 654 NHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPD 689
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 173/421 (41%), Gaps = 34/421 (8%)
Query: 44 NGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGY-------- 95
NG + T+G+++ A + A ++ M Q E + T+ R +
Sbjct: 174 NGVLPTNNTYGMLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDR 233
Query: 96 ----------GRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILV-EENHVKRAIAFYR 144
G+V LD+I F K Q K +L++ V N +++++ F
Sbjct: 234 ADRFFKGWCAGKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFAS 293
Query: 145 EMRKMGIPPSVVS-LNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCR 203
P + S N LI K D+A +F EM G D+ T+ T+I+
Sbjct: 294 GSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAA-NLFSEMLKSGVPIDTVTFNTMIHTCGT 352
Query: 204 MGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFT 263
G +SEA+ L +MEEKG SP TY L+ + ++ A+ +++K G+ P+ T
Sbjct: 353 HGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVT 412
Query: 264 YSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMR 323
+ ++ LC+ + ++ M R + + ++ EG +A + +R +
Sbjct: 413 HRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQ 472
Query: 324 LQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGG---ISPSRATWSLHVRMHNTVV 380
L + + L +I + + +A E V G +S R V +N ++
Sbjct: 473 LDCVLSSTTL-AAVIDVYAEKGLWVEA-----ETVFYGKRNMSGQRN----DVLEYNVMI 522
Query: 381 QGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCV 440
+ +A L+ M+ +G + T++ L + +++A RIL EM+ GC
Sbjct: 523 KAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCK 582
Query: 441 P 441
P
Sbjct: 583 P 583
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/347 (19%), Positives = 139/347 (40%), Gaps = 37/347 (10%)
Query: 129 ILVEENHVKRAIAFYREMRK-MGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGC 187
+L E+ +R + +R + P+V+ NI+++AL + + D + EM + G
Sbjct: 118 LLKEQTRWERVLRVFRFFQSHQSYVPNVIHYNIVLRALGRAGK-WDELRLCWIEMAHNGV 176
Query: 188 QPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIR 247
P + TYG L++ + G V EA M ++ P VT +++ S A R
Sbjct: 177 LPTNNTYGMLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADR 236
Query: 248 LLEEMKKNGIEPNVFTYSTLMDGLCKGGHS--------LQAMELLEMMV----------- 288
+ ++ ++ + +D K G + +MEL ++
Sbjct: 237 FFKGWCAGKVDLDLDS----IDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFA 292
Query: 289 ----TKHNRPNMV-TYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCA 343
+ +P + T+ TLI+ K G+ ++A + M G+ + + +I
Sbjct: 293 SGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGT 352
Query: 344 ASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRG 403
+A + + +M GISP T+++ + +H D A + Y +R G
Sbjct: 353 HGHLSEAESLLKKMEEKGISPDTKTYNILLSLH-------ADAGDIEAALEYYRKIRKVG 405
Query: 404 ISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVM 450
+ + T ++ C+R + + ++ EM + D+ V+M
Sbjct: 406 LFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIM 452
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/346 (20%), Positives = 137/346 (39%), Gaps = 39/346 (11%)
Query: 44 NGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLT-ICRGYGRVHRPL 102
G + + +G +I+ + A RM +E+ V + I+LT + + Y +V
Sbjct: 614 TGVKPNEVVYGSLINGFAESGMVEEAIQYF-RMMEEHGVQSNHIVLTSLIKAYSKVGCLE 672
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
+A RV+ KM+D + + +++ + + V A + + +R+ G V+S ++
Sbjct: 673 EARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGT-CDVISFATMM 731
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEM--EEK 220
L K +D A+++ EM G D ++ ++ G +SE ELF+EM E K
Sbjct: 732 Y-LYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERK 790
Query: 221 ---GFSPSVVTYTSLIHGMCQSDNLGE-----------------------------AIRL 248
+ +T L G S+ + + A+
Sbjct: 791 LLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALES 850
Query: 249 LEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCK 308
+E+ I F Y+ ++ G A++ M K P++VT L+ K
Sbjct: 851 CQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGK 910
Query: 309 EGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFI 354
G + R+ L+P+ L+ + + +A+ QD A+ +
Sbjct: 911 AGMVEGVKRVHSRLTFGELEPSQSLFKAVRDAYVSANR-QDLADVV 955
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 139/300 (46%), Gaps = 16/300 (5%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERM-KQENC--VVTEDILLTICRGYGRVHRP 101
GF H+ T M L N F+ L ++ ++EN VVT + + + G
Sbjct: 122 GFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFV 181
Query: 102 LDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGI--PPSVVSLN 159
+A+ F++M+++ K +Y T+I+ L + K+A +M+ G PP +
Sbjct: 182 KEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYT 241
Query: 160 ILIKALCKN----------KETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSE 209
ILI + C+ + + A ++F EM RG PD TY LI+G C+ +
Sbjct: 242 ILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGR 301
Query: 210 AKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIE-PNVFTYSTLM 268
A ELF +M+ KG P+ VTY S I ++ + AI ++ MKK G P TY+ L+
Sbjct: 302 ALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLI 361
Query: 269 DGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLK 328
L + + +A +L+ MV P TY + + L EG S E L + +G++
Sbjct: 362 HALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTLDEELHKRMREGIQ 421
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 14/188 (7%)
Query: 197 LINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNG 256
L+ L G V EA F M+E P V Y ++I+ +C+ N +A LL++M+ G
Sbjct: 171 LMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPG 230
Query: 257 IE--PNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNR-----------PNMVTYGTLI 303
P+ +TY+ L+ C+ G + + + + NR P++VTY LI
Sbjct: 231 FRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLI 290
Query: 304 NGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEM-VLGGI 362
+G CK + A+E+ + M+ +G PN Y I + + + A + M LG
Sbjct: 291 DGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHG 350
Query: 363 SPSRATWS 370
P +T++
Sbjct: 351 VPGSSTYT 358
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 9/201 (4%)
Query: 256 GIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGT---LINGLCKEGKF 312
G + N T + L KG + L + + N N+VT + L+ L +EG
Sbjct: 122 GFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFV 181
Query: 313 SEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLH 372
EA+ RM+ KP+ Y II+ C +++ A +D+M L G T++
Sbjct: 182 KEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYT 241
Query: 373 VRMHNTVVQGL---CSNVDSPR---AFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNK 426
+ + + G+ C R A +++ M RG ++ T++CLI CK + +
Sbjct: 242 ILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGR 301
Query: 427 AARILEEMISDGCVPDKGIWD 447
A + E+M + GCVP++ ++
Sbjct: 302 ALELFEDMKTKGCVPNQVTYN 322
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 115/271 (42%), Gaps = 25/271 (9%)
Query: 207 VSEAKELFNEMEEK-GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYS 265
+ +A E F +E GF + +T + + + ++ L ++ + NV T +
Sbjct: 107 LQKALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTA 166
Query: 266 T---LMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRM 322
+ LM L + G +A+ M H +P++ Y T+IN LC+ G F +A +LD+M
Sbjct: 167 SITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQM 226
Query: 323 RLQGLK--PNAGLYGKIISGFCAAS-----------SYQDAANFIDEMVLGGISPSRATW 369
+L G + P+ Y +IS +C +A EM+ G P T+
Sbjct: 227 QLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTY 286
Query: 370 SLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAAR 429
N ++ G C RA +L+ M+T+G T++ I+ + ++ A
Sbjct: 287 -------NCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIE 339
Query: 430 ILEEMISDG-CVPDKGIWDVVMGGLWDRKKV 459
++ M G VP + ++ L + ++
Sbjct: 340 MMRTMKKLGHGVPGSSTYTPLIHALVETRRA 370
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 182/398 (45%), Gaps = 29/398 (7%)
Query: 72 LLERMKQENC---VVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVID 128
L++ M++E +VT +IL+ GY ++ + A+ + KME F + ++ +I
Sbjct: 269 LVKEMEKEGISPGLVTWNILIG---GYNQLGKCDAAMDLMQKMETFGITADVFTWTAMIS 325
Query: 129 ILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQ 188
L+ +A+ +R+M G+ P+ V++ + A C + I+ ++ G
Sbjct: 326 GLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSA-CSCLKVINQGSEVHSIAVKMGFI 384
Query: 189 PDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRL 248
D +L++ + G + +A+++F+ ++ K V T+ S+I G CQ+ G+A L
Sbjct: 385 DDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYEL 440
Query: 249 LEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHN-RPNMVTYGTLINGLC 307
M+ + PN+ T++T++ G K G +AM+L + M + N T+ +I G
Sbjct: 441 FTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYI 500
Query: 308 KEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRA 367
+ GK EA+E+ +M+ PN+ I A + A + E + G R
Sbjct: 501 QNGKKDEALELFRKMQFSRFMPNS----VTILSLLPACANLLGAKMVRE--IHGCVLRRN 554
Query: 368 TWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKA 427
++H + N + + D + ++L M T+ +I T++ LI + G A
Sbjct: 555 LDAIHA-VKNALTDTYAKSGDIEYSRTIFLGMETK----DIITWNSLIGGYVLHGSYGPA 609
Query: 428 ARILEEMISDGCVPDKGIWDVV------MGGLWDRKKV 459
+ +M + G P++G + MG + + KKV
Sbjct: 610 LALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKV 647
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 137/306 (44%), Gaps = 17/306 (5%)
Query: 148 KMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSV 207
K+G+ + N ++ K E +D A + F M R D + +++ C+ G
Sbjct: 209 KLGMSSCLRVSNSILAVYAKCGE-LDFATKFFRRMRER----DVIAWNSVLLAYCQNGKH 263
Query: 208 SEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTL 267
EA EL EME++G SP +VT+ LI G Q A+ L+++M+ GI +VFT++ +
Sbjct: 264 EEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAM 323
Query: 268 MDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGL 327
+ GL G QA+++ M PN VT + ++ ++ E+ G
Sbjct: 324 ISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGF 383
Query: 328 KPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNV 387
+ + ++ + +DA D + + TW N+++ G C
Sbjct: 384 IDDVLVGNSLVDMYSKCGKLEDARKVFDSVK----NKDVYTW-------NSMITGYCQAG 432
Query: 388 DSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVP-DKGIW 446
+A++L+ M+ + I T++ +I + K GD +A + + M DG V + W
Sbjct: 433 YCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATW 492
Query: 447 DVVMGG 452
++++ G
Sbjct: 493 NLIIAG 498
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 123/267 (46%), Gaps = 17/267 (6%)
Query: 177 QIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGM 236
+I H +PD + L++ + G +++A+++F+ M E+ ++ T++++I
Sbjct: 101 RILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRER----NLFTWSAMIGAY 156
Query: 237 CQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPN- 295
+ + E +L M K+G+ P+ F + ++ G C ++A +++ +V K +
Sbjct: 157 SRENRWREVAKLFRLMMKDGVLPDDFLFPKILQG-CANCGDVEAGKVIHSVVIKLGMSSC 215
Query: 296 MVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFID 355
+ +++ K G+ A + RMR + + + ++ +C +++A +
Sbjct: 216 LRVSNSILAVYAKCGELDFATKFFRRMR----ERDVIAWNSVLLAYCQNGKHEEAVELVK 271
Query: 356 EMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLI 415
EM GISP TW++ + +N + G C A L M T GI+ ++ T+ +I
Sbjct: 272 EMEKEGISPGLVTWNILIGGYNQL--GKCD-----AAMDLMQKMETFGITADVFTWTAMI 324
Query: 416 KCFCKRGDLNKAARILEEMISDGCVPD 442
G +A + +M G VP+
Sbjct: 325 SGLIHNGMRYQALDMFRKMFLAGVVPN 351
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 117/278 (42%), Gaps = 31/278 (11%)
Query: 201 LCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPN 260
LCR GS+ EA++ + + ++G TY L+ S ++ R+L EP+
Sbjct: 56 LCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLG-RILHARFGLFTEPD 114
Query: 261 VFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILD 320
VF + L+ K G A ++ + M + N+ T+ +I +E ++ E ++
Sbjct: 115 VFVETKLLSMYAKCGCIADARKVFDSMRER----NLFTWSAMIGAYSRENRWREVAKLFR 170
Query: 321 RMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMV--LGGISPSRATWSL------- 371
M G+ P+ L+ KI+ G CA +A I +V LG S R + S+
Sbjct: 171 LMMKDGVLPDDFLFPKILQG-CANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKC 229
Query: 372 ----------------HVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLI 415
V N+V+ C N A +L M GIS + T++ LI
Sbjct: 230 GELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILI 289
Query: 416 KCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
+ + G + A ++++M + G D W ++ GL
Sbjct: 290 GGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGL 327
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 142/320 (44%), Gaps = 7/320 (2%)
Query: 123 YLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEM 182
Y + + + ++++ + EM + GI P + +I +N A++ F +M
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNG-VPKRAVEWFEKM 236
Query: 183 PNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNL 242
+ GC+PD+ T +I+ R G+V A L++ + + VT+++LI S N
Sbjct: 237 SSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNY 296
Query: 243 GEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTL 302
+ + EEMK G++PN+ Y+ L+D + + QA + + ++T PN TY L
Sbjct: 297 DGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAAL 356
Query: 303 INGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGI 362
+ + +A+ I M+ +GL LY ++S CA + Y D A I + +
Sbjct: 357 VRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLS-MCADNRYVDEAFEIFQDMKNCE 415
Query: 363 SPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRG 422
+ +W+ + G S ++ L MR G + +I+C+ K
Sbjct: 416 TCDPDSWTFSSLITVYACSGRVSEAEAA-----LLQMREAGFEPTLFVLTSVIQCYGKAK 470
Query: 423 DLNKAARILEEMISDGCVPD 442
++ R ++++ G PD
Sbjct: 471 QVDDVVRTFDQVLELGITPD 490
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 144/323 (44%), Gaps = 9/323 (2%)
Query: 20 QLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQE 79
++ + KD+ K+ +FD G + D+ TF +IS + A E+M
Sbjct: 183 KVFRKSKDLEKSEKLFDEM---LERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSF 239
Query: 80 NCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRA 139
C + + YGR A+ ++ + + + ++ T+I I +
Sbjct: 240 GCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGC 299
Query: 140 IAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLIN 199
+ Y EM+ +G+ P++V N LI ++ + K + + I+ ++ G P+ TY L+
Sbjct: 300 LNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKI-IYKDLITNGFTPNWSTYAALVR 358
Query: 200 GLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDN--LGEAIRLLEEMKK-NG 256
R +A ++ EM+EKG S +V+ Y +L+ MC +DN + EA + ++MK
Sbjct: 359 AYGRARYGDDALAIYREMKEKGLSLTVILYNTLL-SMC-ADNRYVDEAFEIFQDMKNCET 416
Query: 257 IEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAV 316
+P+ +T+S+L+ G +A L M P + ++I K + + V
Sbjct: 417 CDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVV 476
Query: 317 EILDRMRLQGLKPNAGLYGKIIS 339
D++ G+ P+ G +++
Sbjct: 477 RTFDQVLELGITPDDRFCGCLLN 499
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 129/288 (44%), Gaps = 9/288 (3%)
Query: 155 VVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELF 214
V+ N+ +K K+K+ ++ + ++F EM RG +PD+ T+ T+I+ + G A E F
Sbjct: 175 VILYNVTMKVFRKSKD-LEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWF 233
Query: 215 NEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKG 274
+M G P VT ++I ++ N+ A+ L + + + T+STL+
Sbjct: 234 EKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVS 293
Query: 275 GHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLY 334
G+ + + E M +PN+V Y LI+ + + + +A I + G PN Y
Sbjct: 294 GNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTY 353
Query: 335 GKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQ 394
++ + A DA EM G+ SL V ++NT++ N AF+
Sbjct: 354 AALVRAYGRARYGDDALAIYREMKEKGL-------SLTVILYNTLLSMCADNRYVDEAFE 406
Query: 395 LYLSMRT-RGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVP 441
++ M+ + TF LI + G +++A L +M G P
Sbjct: 407 IFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEP 454
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 111/259 (42%), Gaps = 29/259 (11%)
Query: 213 LFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLC 272
L N +E S V+ Y + +S +L ++ +L +EM + GI+P+ T++T++
Sbjct: 162 LNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCAR 221
Query: 273 KGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAG 332
+ G +A+E E M + P+ VT +I+ + G A+ + DR R + + +A
Sbjct: 222 QNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAV 281
Query: 333 LYGKIISGFCAASSYQDAANFIDEMVLGGISP--------------SRATWSLHVRMHNT 378
+ +I + + +Y N +EM G+ P ++ W + +
Sbjct: 282 TFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDL 341
Query: 379 VVQGLCSNVDS--------------PRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDL 424
+ G N + A +Y M+ +G+S+ + ++ L+ +
Sbjct: 342 ITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYV 401
Query: 425 NKAARILEEMIS-DGCVPD 442
++A I ++M + + C PD
Sbjct: 402 DEAFEIFQDMKNCETCDPD 420
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/467 (21%), Positives = 189/467 (40%), Gaps = 46/467 (9%)
Query: 10 PKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRH---DHTTFGVMISRLVAANQF 66
P ++T+ +V Q+ K ++ KA F + + + H T+ MI + Q
Sbjct: 255 PDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQI 314
Query: 67 RSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTV 126
+ A +RM +E V T T+ YG + L + K ++Y +
Sbjct: 315 KEASETFKRMLEEGIVPTTVTFNTMIHIYGN-NGQLGEVTSLMKTMKLHCAPDTRTYNIL 373
Query: 127 IDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRG 186
I + + N ++RA A+++EM+ G+ P VS L+ A + ++ A + EM +
Sbjct: 374 ISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAF-SIRHMVEEAEGLIAEMDDDN 432
Query: 187 CQPDSYT----------------------------------YGTLINGLCRMGSVSEAKE 212
+ D YT Y I+ G +SEA+
Sbjct: 433 VEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAER 492
Query: 213 LFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLC 272
+F +E +V+ Y +I S + +A L E M G+ P+ TY+TL+ L
Sbjct: 493 VFICCQEVN-KRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILA 551
Query: 273 KGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAG 332
+ LE M + + Y +I+ K G+ + A E+ M ++P+
Sbjct: 552 SADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVV 611
Query: 333 LYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRA 392
+YG +I+ F + Q A ++++ M GI + ++ ++++ V +D A
Sbjct: 612 VYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKV-----GYLDEAEA 666
Query: 393 -FQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDG 438
++ L + ++ T +C+I + +R + KA I + M G
Sbjct: 667 IYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG 713
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/467 (23%), Positives = 187/467 (40%), Gaps = 39/467 (8%)
Query: 10 PKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSA 69
P T +++ L DI +A F +G + D ++ ++ + A
Sbjct: 365 PDTRTYNILISLHTKNNDIERAGAYFKEMK---DDGLKPDPVSYRTLLYAFSIRHMVEEA 421
Query: 70 EGLLERMKQENCVVTEDILLTICRGYGR---VHRPLDAIRVFHKMEDFQLKFTQKSYLTV 126
EGL+ M +N + E + R Y + + + FH + + + Y
Sbjct: 422 EGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNM----SSEGYSAN 477
Query: 127 IDILVEENHVKRAIAFY---REMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMP 183
ID E ++ A + +E+ K +V+ N++IKA +K + + A ++F M
Sbjct: 478 IDAYGERGYLSEAERVFICCQEVNKR----TVIEYNVMIKAYGISK-SCEKACELFESMM 532
Query: 184 NRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLG 243
+ G PD TY TL+ L + + +M E G+ + Y ++I + L
Sbjct: 533 SYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLN 592
Query: 244 EAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLI 303
A + +EM + IEP+V Y L++ G+ QAM +E M N V Y +LI
Sbjct: 593 MAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLI 652
Query: 304 NGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQD------AANFIDEM 357
K G EA E + R LQ N Y + + C + Y + A D M
Sbjct: 653 KLYTKVGYLDEA-EAIYRKLLQSC--NKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSM 709
Query: 358 VLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKC 417
G + T+++ + M+ N A Q+ MR I + +++ ++
Sbjct: 710 KQRG-EANEFTFAMMLCMYK-------KNGRFEEATQIAKQMREMKILTDPLSYNSVLGL 761
Query: 418 FCKRGDLNKAARILEEMISDGCVPD----KGIWDVVMGGLWDRKKVR 460
F G +A +EM+S G PD K + ++M +K VR
Sbjct: 762 FALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVR 808
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 167/420 (39%), Gaps = 85/420 (20%)
Query: 116 LKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSA 175
+K +Y T+ID+ + A+ + +M K+G+ P V+ I+++ K +E A
Sbjct: 218 IKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKARE-FQKA 276
Query: 176 LQIFHEMPNRGCQPDS------YTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTY 229
+ F + + DS YTY T+I+ + G + EA E F M E+G P+ VT+
Sbjct: 277 EEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTF 336
Query: 230 TSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVT 289
++IH + LGE L++ MK + P+ TY+ L+ K +A + M
Sbjct: 337 NTMIHIYGNNGQLGEVTSLMKTMKLH-CAPDTRTYNILISLHTKNNDIERAGAYFKEMKD 395
Query: 290 KHNRPNMVTYGTLINGLC-------KEGKFSE---------------------AVEILDR 321
+P+ V+Y TL+ EG +E E+L++
Sbjct: 396 DGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEK 455
Query: 322 -------------MRLQGLKPNAGLYGK---------------------------IISGF 341
M +G N YG+ +I +
Sbjct: 456 SWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAY 515
Query: 342 CAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLS-MR 400
+ S + A + M+ G++P + T+ NT+VQ L S D P + YL MR
Sbjct: 516 GISKSCEKACELFESMMSYGVTPDKCTY-------NTLVQILAS-ADMPHKGRCYLEKMR 567
Query: 401 TRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKVR 460
G + + +I F K G LN A + +EM+ PD ++ V++ D V+
Sbjct: 568 ETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQ 627
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 153/397 (38%), Gaps = 84/397 (21%)
Query: 129 ILVEENHVKRAIAFYREMRKMG-IPPSVVSLNILIKAL---CKNKETIDSALQIFHEMPN 184
IL E+ H +RA+ + + G +V+ NI+++ L CK + ++ EM
Sbjct: 160 ILKEQIHWERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWR----YVQSLWDEMIR 215
Query: 185 RGCQPDSYTYGTLIN----------GLCRMGSVS-------------------------E 209
+G +P + TYGTLI+ LC +G +S +
Sbjct: 216 KGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQK 275
Query: 210 AKELFNEM---EEKGFSP---SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFT 263
A+E F + E K S S TY ++I +S + EA + M + GI P T
Sbjct: 276 AEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVT 335
Query: 264 YSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMR 323
++T++ G + L++ M H P+ TY LI+ K A M+
Sbjct: 336 FNTMIHIYGNNGQLGEVTSLMKTMKL-HCAPDTRTYNILISLHTKNNDIERAGAYFKEMK 394
Query: 324 LQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRAT--------------- 368
GLKP+ Y ++ F ++A I EM + T
Sbjct: 395 DDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLE 454
Query: 369 --WSLHVRMH---NTVVQGLCSNVD----------SPRAFQLYLSMRTRGISIEIDTFDC 413
WS R H N +G +N+D + R F + R + IE ++
Sbjct: 455 KSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTV-IE---YNV 510
Query: 414 LIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVM 450
+IK + KA + E M+S G PDK ++ ++
Sbjct: 511 MIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLV 547
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 130/305 (42%), Gaps = 44/305 (14%)
Query: 21 LIKA---EKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMK 77
+IKA K KA +F+S S G D T+ ++ L +A+ LE+M+
Sbjct: 511 MIKAYGISKSCEKACELFESMM---SYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMR 567
Query: 78 QENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVK 137
+ V + + ++ + A V+ +M ++ ++ Y +I+ + +V+
Sbjct: 568 ETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQ 627
Query: 138 RAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMP---NRGCQPDSYTY 194
+A+++ M++ GIP + V N LIK K +D A I+ ++ N+ PD YT
Sbjct: 628 QAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVG-YLDEAEAIYRKLLQSCNKTQYPDVYTS 686
Query: 195 GTLINGLCRMGSVSEAKELFNEMEEKG-------------------FSPSV--------- 226
+IN V +A+ +F+ M+++G F +
Sbjct: 687 NCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREM 746
Query: 227 ------VTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQA 280
++Y S++ EA+ +EM +GI+P+ T+ +L L K G S +A
Sbjct: 747 KILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKA 806
Query: 281 MELLE 285
+ +E
Sbjct: 807 VRKIE 811
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 146/343 (42%), Gaps = 48/343 (13%)
Query: 12 QITSSLVEQLIKAEKDINKAVLMF----DSATAEYSNGFRHDHTTFGVMISRLVAANQFR 67
+I+ S + ++ E D +KA+ ++ D + + S+ + + T + RL +F
Sbjct: 30 KISVSKAKSTLRKEHDPDKALKIYANVSDHSASPVSSRYAQELT-----VRRLAKCRRFS 84
Query: 68 SAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVI 127
E L+E K + + E T+ R YG+ A+R F +M+ +
Sbjct: 85 DIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQY------------- 131
Query: 128 DILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGC 187
G P S VS N L+ A C + + D Q+F E+P R
Sbjct: 132 ----------------------GTPRSAVSFNALLNA-CLHSKNFDKVPQLFDEIPQRYN 168
Query: 188 Q--PDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEA 245
+ PD +YG LI C G+ +A E+ +M+ KG + + +T+++ + + L A
Sbjct: 169 KIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVA 228
Query: 246 IRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING 305
L EM K G E + Y+ + K + EL+E M + +P+ ++Y L+
Sbjct: 229 DNLWNEMVKKGCELDNAAYNVRIMSAQKESPE-RVKELIEEMSSMGLKPDTISYNYLMTA 287
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQ 348
C+ G EA ++ + + PNA + +I C + Y+
Sbjct: 288 YCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYE 330
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 135/294 (45%), Gaps = 16/294 (5%)
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF 222
K+ + + D AL+I+ + + P S Y + + R+ ++ +E
Sbjct: 37 KSTLRKEHDPDKALKIYANVSDHSASPVSSRYAQELT-VRRLAKCRRFSDIETLIESHKN 95
Query: 223 SPSVVT---YTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQ 279
P + Y++LI Q+ A+R E+M + G + +++ L++ + +
Sbjct: 96 DPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDK 155
Query: 280 AMELLEMMVTKHNR--PNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKI 337
+L + + ++N+ P+ ++YG LI C G +A+EI+ +M+ +G++ + I
Sbjct: 156 VPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTI 215
Query: 338 ISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSP-RAFQLY 396
+S + A N +EMV G A +++ + + + +SP R +L
Sbjct: 216 LSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRI---------MSAQKESPERVKELI 266
Query: 397 LSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVM 450
M + G+ + +++ L+ +C+RG L++A ++ E + + C P+ + ++
Sbjct: 267 EEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLI 320
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 158/377 (41%), Gaps = 40/377 (10%)
Query: 53 FGVMISRLVAANQFRSAEGLLERMKQENCVVTEDIL-LTICRGYGRVHRPLDAIRVFHKM 111
FGV I +++ L++ +K+ N + I+ L I + R +DA + ++
Sbjct: 190 FGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEEL 249
Query: 112 EDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI------KAL 165
+ K +Y + + V ++ ++ RK+G+ P I K L
Sbjct: 250 RNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRL 309
Query: 166 CKNKETI---------------------------DSALQIFHEMPNRGCQPDSYTYGTLI 198
+ KE DSA++ M + G P T L
Sbjct: 310 TEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLS 369
Query: 199 NGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIE 258
LCR + + + KG+ + +Y+ +I +C++ + E+ L+EMKK G+
Sbjct: 370 KNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLA 429
Query: 259 PNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEI 318
P+V Y+ L++ CK A +L + M + + N+ TY LI L +EG+ E++ +
Sbjct: 430 PDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRL 489
Query: 319 LDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNT 378
D+M +G++P+ +Y +I G C + + A + + R ++ R+ +
Sbjct: 490 FDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCM------ERDHKTVTRRVLSE 543
Query: 379 VVQGLCSNVDSPRAFQL 395
V LCSN S A QL
Sbjct: 544 FVLNLCSNGHSGEASQL 560
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/427 (21%), Positives = 165/427 (38%), Gaps = 45/427 (10%)
Query: 43 SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPL 102
SN D + + +I LV + +SA +LE + D+ + G
Sbjct: 110 SNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYD 169
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRK--MGIPPSVVSLNI 160
A ++F KM + + I + + + E++K + I S+++L I
Sbjct: 170 YAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLI 229
Query: 161 LIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
L +LCK +D A I E+ N C+PD Y + G++ E + + + +
Sbjct: 230 L-HSLCKCSREMD-AFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKL 287
Query: 221 GFSPSVVTYTSLIHGMCQSDNLGEA----------------------------------I 246
G +P Y + I + + L EA +
Sbjct: 288 GVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAV 347
Query: 247 RLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGL 306
L M G P + T S L LC+ S ++ E++ +K + +Y +I+ L
Sbjct: 348 EFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFL 407
Query: 307 CKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSR 366
CK G+ E+ L M+ +GL P+ LY +I C A + A DEM + G +
Sbjct: 408 CKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNL 467
Query: 367 ATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNK 426
T+ N +++ L ++ + +L+ M RGI + + LI+ CK +
Sbjct: 468 TTY-------NVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEA 520
Query: 427 AARILEE 433
A + +
Sbjct: 521 AMEVFRK 527
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 2/165 (1%)
Query: 121 KSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFH 180
+SY +I L + V+ + +EM+K G+ P V N LI+A CK E I A +++
Sbjct: 398 QSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCK-AEMIRPAKKLWD 456
Query: 181 EMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSD 240
EM GC+ + TY LI L G E+ LF++M E+G P Y SLI G+C+
Sbjct: 457 EMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKET 516
Query: 241 NLGEAIRLLEE-MKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
+ A+ + + M+++ S + LC GHS +A +LL
Sbjct: 517 KIEAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEASQLL 561
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/358 (19%), Positives = 141/358 (39%), Gaps = 46/358 (12%)
Query: 139 AIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDS------------------ALQIFH 180
+I+++ + + + +++ L K + NK +DS A +
Sbjct: 82 SISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLE 141
Query: 181 EMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSD 240
E + G + L+ GL G A++LF +M KG S + + + I C+S
Sbjct: 142 EAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSS 201
Query: 241 NLGEAIRLLEEMKKNGIEPNVFTYSTL-MDGLCKGGHSLQAMELLEMMVTKHNRPNMVTY 299
+ +RL++E+KK + N + L + LCK + A +LE + +P+ + Y
Sbjct: 202 ETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAY 261
Query: 300 GTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVL 359
+ G E +L + R G+ P + Y I +A +A + +V
Sbjct: 262 RVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVS 321
Query: 360 G-----------------GISPSRATWSL----------HVRMHNTVVQGLCSNVDSPRA 392
G + P A L +R + + + LC + S
Sbjct: 322 GKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHL 381
Query: 393 FQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVM 450
+ Y + ++G E+ ++ +I CK G + ++ L+EM +G PD +++ ++
Sbjct: 382 IKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALI 439
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 37/210 (17%)
Query: 43 SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPL 102
S G+ + ++ +MIS L A + R + L+ MK+E + D+ L
Sbjct: 390 SKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEG--LAPDVSL------------- 434
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
Y +I+ + ++ A + EM G ++ + N+LI
Sbjct: 435 --------------------YNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLI 474
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNE-MEEKG 221
+ L + E + +L++F +M RG +PD Y +LI GLC+ + A E+F + ME
Sbjct: 475 RKLSEEGEA-EESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDH 533
Query: 222 FSPSVVTYTSLIHGMCQSDNLGEAIRLLEE 251
+ + + + +C + + GEA +LL E
Sbjct: 534 KTVTRRVLSEFVLNLCSNGHSGEASQLLRE 563
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 92/224 (41%), Gaps = 6/224 (2%)
Query: 218 EEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHS 277
++ G+S ++Y S+ + S L +++K N I + Y +L+D L G +
Sbjct: 74 QQPGYSHDSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKA 133
Query: 278 LQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKI 337
A +LE + + L+ GL +G + A ++ +MR +G+ N +G
Sbjct: 134 QSAFWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVY 193
Query: 338 ISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYL 397
I FC +S +DE+ ++ + + +L ++ LC AF +
Sbjct: 194 IGWFCRSSETNQLLRLVDEVKKANLNINGSIIAL------LILHSLCKCSREMDAFYILE 247
Query: 398 SMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVP 441
+R + + + + F G+L + +L++ G P
Sbjct: 248 ELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAP 291
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 143/321 (44%), Gaps = 16/321 (4%)
Query: 87 ILLTICRGYGRVHRPLDAIRVFHKMED--FQLKFTQKSYLTVIDILVEENHVKRAIAFYR 144
ILL +G L+A F KME F+ KF + ++ E +K A + +
Sbjct: 144 ILLCKIAKFGSYEETLEA---FVKMEKEIFRKKFGVDEFNILLRAFCTEREMKEARSIFE 200
Query: 145 EMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRM 204
++ P V ++NIL+ + + + L +HEM RG +P+S TYG I+G C+
Sbjct: 201 KLHSR-FNPDVKTMNILLLGFKEAGDVTATEL-FYHEMVKRGFKPNSVTYGIRIDGFCKK 258
Query: 205 GSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTY 264
+ EA LF +M+ F +V T+LIHG + N +A +L +E+ K G+ P+ Y
Sbjct: 259 RNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAY 318
Query: 265 STLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGL--CKEGKFSEAVEILDRM 322
+ LM L K G A+++++ M K P+ VT+ ++ G+ KE F+ E +M
Sbjct: 319 NALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKM 378
Query: 323 RLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQG 382
+ + L P ++ FC + M+ G P H +
Sbjct: 379 KERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCP-------HGHALELLTTA 431
Query: 383 LCSNVDSPRAFQLYLSMRTRG 403
LC+ + AF+ RG
Sbjct: 432 LCARRRANDAFECSWQTVERG 452
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 118/265 (44%), Gaps = 19/265 (7%)
Query: 201 LCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPN 260
L RM +A L E+ + P+++++ S+ +C+ G LE K +E
Sbjct: 113 LARMRYFDQAWALMAEVRKD--YPNLLSFKSMSILLCKIAKFGSYEETLEAFVK--MEKE 168
Query: 261 VF-------TYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFS 313
+F ++ L+ C +A + E + ++ N P++ T L+ G + G +
Sbjct: 169 IFRKKFGVDEFNILLRAFCTEREMKEARSIFEKLHSRFN-PDVKTMNILLLGFKEAGDVT 227
Query: 314 EAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHV 373
M +G KPN+ YG I GFC ++ +A ++M R + + V
Sbjct: 228 ATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDM-------DRLDFDITV 280
Query: 374 RMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEE 433
++ T++ G + +A QL+ + RG++ + ++ L+ K GD++ A ++++E
Sbjct: 281 QILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKE 340
Query: 434 MISDGCVPDKGIWDVVMGGLWDRKK 458
M G PD + + G+ K+
Sbjct: 341 MEEKGIEPDSVTFHSMFIGMMKSKE 365
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 1/203 (0%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
GF+ + T+G+ I F A L E M + + +T IL T+ G G + A
Sbjct: 240 GFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKA 299
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
++F ++ L +Y ++ L++ V AI +EM + GI P V+ + +
Sbjct: 300 RQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIG 359
Query: 165 LCKNKE-TIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFS 223
+ K+KE + + + +M R P + T L+ C G V+ +L+ M EKG+
Sbjct: 360 MMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYC 419
Query: 224 PSVVTYTSLIHGMCQSDNLGEAI 246
P L +C +A
Sbjct: 420 PHGHALELLTTALCARRRANDAF 442
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 178/391 (45%), Gaps = 18/391 (4%)
Query: 52 TFGVMISRLVAANQFRSAEGLLERMK-QENCVVTEDILLTICRGYGRVHRPLDAIRVFHK 110
+ +I L ++Q + +L ++ E E I + YG R +AI VF K
Sbjct: 74 AYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAIEVFFK 133
Query: 111 MEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMR----KMGIPPSVVSLNILIKALC 166
+ +F+ + + ++ +LV + ++++ E+ +MG+ + ILI ALC
Sbjct: 134 IPNFRCVPSAYTLNALLLVLVRK---RQSLELVPEILVKACRMGVRLEESTFGILIDALC 190
Query: 167 KNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVS--EAKELFNEMEEKGFSP 224
+ E +D A ++ M D Y L++ +C+ S + ++ + FSP
Sbjct: 191 RIGE-VDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSP 249
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
+ YT ++ + + E + +L +MK + +EP++ Y+ ++ G+ +A +L
Sbjct: 250 GLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLF 309
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAA 344
+ ++ P++ TY INGLCK+ A++++ M G +PN Y +I A
Sbjct: 310 DELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKA 369
Query: 345 SSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGI 404
A EM G++ + T+ + + + V + +C++ AF + + +++ I
Sbjct: 370 GDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRI 429
Query: 405 SIEIDTFDCLIKCFCKRGDLNKAARILEEMI 435
+ +I C++G +++A +L ++
Sbjct: 430 -------EEVISRLCEKGLMDQAVELLAHLV 453
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 135/282 (47%), Gaps = 13/282 (4%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVT----EDILLTICRGYGRVHR 100
G R + +TFG++I L + A L+ M Q++ +V +L ++C+ H+
Sbjct: 174 GVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCK-----HK 228
Query: 101 PLDAIRVFHKMEDF-QLKFTQ--KSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVS 157
V +ED + +F+ + Y V+ LVE K ++ +M+ + P +V
Sbjct: 229 DSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVC 288
Query: 158 LNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEM 217
I+++ + + E A ++F E+ G PD YTY INGLC+ + A ++ + M
Sbjct: 289 YTIVLQGVIAD-EDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSM 347
Query: 218 EEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHS 277
+ G P+VVTY LI + ++ +L A L +EM+ NG+ N T+ ++ +
Sbjct: 348 NKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEV 407
Query: 278 LQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEIL 319
+ A LLE + +I+ LC++G +AVE+L
Sbjct: 408 VCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELL 449
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 141/319 (44%), Gaps = 44/319 (13%)
Query: 136 VKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYG 195
++ AI + ++ PS +LN L+ L + +++++ +I + G + + T+G
Sbjct: 124 IEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFG 183
Query: 196 TLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLG--EAIRLLEEMK 253
LI+ LCR+G V A EL M + Y+ L+ +C+ + + I LE+++
Sbjct: 184 ILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLR 243
Query: 254 KNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFS 313
K P + Y+ +M L +GG GK
Sbjct: 244 KTRFSPGLRDYTVVMRFLVEGGR---------------------------------GK-- 268
Query: 314 EAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHV 373
E V +L++M+ ++P+ Y ++ G A Y A DE++L G++P T+
Sbjct: 269 EVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTY---- 324
Query: 374 RMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEE 433
N + GLC D A ++ SM G + T++ LIK K GDL++A + +E
Sbjct: 325 ---NVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKE 381
Query: 434 MISDGCVPDKGIWDVVMGG 452
M ++G + +D+++
Sbjct: 382 METNGVNRNSHTFDIMISA 400
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/285 (20%), Positives = 118/285 (41%), Gaps = 45/285 (15%)
Query: 172 IDSALQIFHEMPNRGCQPDSYTYGTLINGLCR-MGSVSEAKELFNEMEEKGFSPSVVTYT 230
I+ A+++F ++PN C P +YT L+ L R S+ E+ + G T+
Sbjct: 124 IEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFG 183
Query: 231 SLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLC--KGGHSLQAMELLEMMV 288
LI +C+ + A L+ M ++ + + YS L+ +C K + LE +
Sbjct: 184 ILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLR 243
Query: 289 TKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQ 348
P + Y ++ L + G+ E V +L++M+ ++P+ Y
Sbjct: 244 KTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCY-------------- 289
Query: 349 DAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEI 408
V+QG+ ++ D P+A +L+ + G++ ++
Sbjct: 290 ----------------------------TIVLQGVIADEDYPKADKLFDELLLLGLAPDV 321
Query: 409 DTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
T++ I CK+ D+ A +++ M G P+ +++++ L
Sbjct: 322 YTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKAL 366
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 136/271 (50%), Gaps = 4/271 (1%)
Query: 56 MISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQ 115
++ + A LL+ ++++N + + + G ++ + RVF ++
Sbjct: 76 LVEKFTRDGNLSGAYDLLQSLQEKNICLPISVFKNLLAAAGELNDMKLSCRVFREVLILP 135
Query: 116 LK--FTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETID 173
K + YL + + + + +E+ + +P ++ +N +I A + ++ ID
Sbjct: 136 GKEPLSSDCYLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFAETRQ-ID 194
Query: 174 SALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK-GFSPSVVTYTSL 232
L I EM C+PD TY ++++ L R G V+E + + M+E S +++TY ++
Sbjct: 195 KVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTV 254
Query: 233 IHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHN 292
++GM ++ + + EM + GIEP++ +Y+ ++D L + G+ +++ L + M +
Sbjct: 255 LNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQI 314
Query: 293 RPNMVTYGTLINGLCKEGKFSEAVEILDRMR 323
RP++ Y LI+ L K G F A+++ D ++
Sbjct: 315 RPSVYVYRALIDCLKKSGDFQSALQLSDELK 345
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 88/184 (47%), Gaps = 8/184 (4%)
Query: 213 LFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLC 272
L E+ E ++ +I ++ + + + +L+EMK+ +P+V TY++++D L
Sbjct: 164 LLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILG 223
Query: 273 KGGHSLQAMELLEMMVTKHN-RPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNA 331
+ G + + +L M + N++TY T++NG+ K +F + I + M G++P+
Sbjct: 224 RAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDL 283
Query: 332 GLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPR 391
Y +I + + +++ DEM I PS V ++ ++ L + D
Sbjct: 284 LSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPS-------VYVYRALIDCLKKSGDFQS 336
Query: 392 AFQL 395
A QL
Sbjct: 337 ALQL 340
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 144/323 (44%), Gaps = 15/323 (4%)
Query: 121 KSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFH 180
K + V+ +L E+ ++RK + +I+ + L K + D A+ IF
Sbjct: 104 KEFNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEED-AIGIFK 162
Query: 181 EMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSD 240
+ C D +T +I+ LC G V A + + ++ + Y SL+ G
Sbjct: 163 ILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQR 222
Query: 241 NLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCK-------GGHSLQAMELLEMMVTKHNR 293
N+ EA R++++MK GI P++F +++L+ LC+ G +A+ ++ M + +
Sbjct: 223 NVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQ 282
Query: 294 PNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANF 353
P ++Y L++ L + + E+ +IL++M+ G P+ G Y ++ +
Sbjct: 283 PTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQI 342
Query: 354 IDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDC 413
+DEM+ G P R + + ++ LC A QL+ M+ + +D
Sbjct: 343 VDEMIERGFRPER-------KFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDL 395
Query: 414 LIKCFCKRGDLNKAARILEEMIS 436
LI CK G+ K + EE +S
Sbjct: 396 LIPKLCKGGNFEKGRELWEEALS 418
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 160/354 (45%), Gaps = 15/354 (4%)
Query: 14 TSSLVEQLIKAEKDIN--KAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEG 71
+S+LV Q+I++ K+ + +L F S + + HD F ++ L + +
Sbjct: 66 SSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKE-FNYVLRVLAEKKDHTAMQI 124
Query: 72 LLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILV 131
LL +++EN + + + +V + DAI +F ++ F + +I L
Sbjct: 125 LLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALC 184
Query: 132 EENHVKRAIAFYREMRKM--GIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQP 189
HVKRA+ + + G SV + ++ +N + A ++ +M + G P
Sbjct: 185 SRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRN---VKEARRVIQDMKSAGITP 241
Query: 190 DSYTYGTLINGLCRM-------GSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNL 242
D + + +L+ LC G V EA + EM P+ ++Y L+ + ++ +
Sbjct: 242 DLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRV 301
Query: 243 GEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTL 302
E+ ++LE+MK++G +P+ +Y ++ L G + ++++ M+ + RP Y L
Sbjct: 302 RESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDL 361
Query: 303 INGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDE 356
I LC + + A+++ ++M+ + +Y +I C +++ +E
Sbjct: 362 IGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEE 415
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 125/284 (44%), Gaps = 16/284 (5%)
Query: 11 KQITSSLVEQLIKA--EKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRS 68
KQ S + E L+K E+D + D + +GF T +IS L + +
Sbjct: 138 KQTFSIVAETLVKVGKEEDAIGIFKILDKFSCP-QDGF-----TVTAIISALCSRGHVKR 191
Query: 69 AEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVID 128
A G++ K + ++ G+ +A RV M+ + + +++
Sbjct: 192 ALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLT 251
Query: 129 ILVEEN-------HVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHE 181
L E N V A+ EMR I P+ +S NIL+ L + + +S QI +
Sbjct: 252 CLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESC-QILEQ 310
Query: 182 MPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDN 241
M GC PD+ +Y ++ L G + ++ +EM E+GF P Y LI +C +
Sbjct: 311 MKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVER 370
Query: 242 LGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLE 285
+ A++L E+MK++ + Y L+ LCKGG+ + EL E
Sbjct: 371 VNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWE 414
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 95/214 (44%), Gaps = 14/214 (6%)
Query: 248 LLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLC 307
LL +++K + T+S + + L K G A+ + +++ + T +I+ LC
Sbjct: 125 LLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALC 184
Query: 308 KEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRA 367
G A+ ++ + +Y ++ G+ + ++A I +M GI+P
Sbjct: 185 SRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLF 244
Query: 368 TWSLHVRMHNTVVQGLCS-NVDS------PRAFQLYLSMRTRGISIEIDTFDCLIKCFCK 420
+ N+++ LC NV+ P A + L MR+ I +++ L+ C +
Sbjct: 245 CF-------NSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGR 297
Query: 421 RGDLNKAARILEEMISDGCVPDKGIWDVVMGGLW 454
+ ++ +ILE+M GC PD G + V+ L+
Sbjct: 298 TRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLY 331
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/343 (17%), Positives = 135/343 (39%), Gaps = 53/343 (15%)
Query: 126 VIDILVEENHVKRAIAFYR-EMRKMGIPPSVVSLNILIKALCKNKETIDSALQIF-HEMP 183
VI+ E +R + F+ + +G N +++ L + K+ +A+QI ++
Sbjct: 73 VIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKD--HTAMQILLSDLR 130
Query: 184 NRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLG 243
D T+ + L ++G +A +F +++ T T++I +C ++
Sbjct: 131 KENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVK 190
Query: 244 EAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLI 303
A+ ++ K + Y +L+ G + +A +++ M + P++ + +L+
Sbjct: 191 RALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLL 250
Query: 304 NGLCKE-------GKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDE 356
LC+ G EA+ I+ MR ++P + Y ++S +++ +++
Sbjct: 251 TCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQ 310
Query: 357 MVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIK 416
M G P ++ VR+ LYL+
Sbjct: 311 MKRSGCDPDTGSYYFVVRV-------------------LYLT------------------ 333
Query: 417 CFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
G K +I++EMI G P++ + ++G L ++V
Sbjct: 334 -----GRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERV 371
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 102/209 (48%), Gaps = 14/209 (6%)
Query: 143 YREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLC 202
++ MR+ + NI+I LCK + D A IF + G QPD TY +I
Sbjct: 2 FKVMRESNMDMDTAGYNIIIHGLCKAGK-FDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 203 RMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVF 262
R S+ A++L+ EM +G P +TY S+IHG+C+ + L +A + + +
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARK---------VSKSCS 107
Query: 263 TYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRM 322
T++TL++G CK M L M + N++TY TLI+G + G F+ A++I M
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 323 RLQGLKPNAGLYGKIISGFCAASSYQDAA 351
G+ ++ + I+ C+ + A
Sbjct: 168 VSNGVYSSSITFRDILPQLCSRKELRKAV 196
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 99/220 (45%), Gaps = 20/220 (9%)
Query: 178 IFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMC 237
+F M D+ Y +I+GLC+ G EA +F + G P V TY +I
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 238 QSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMV 297
+ +LG A +L EM + G+ P+ TY++++ GLCK QA ++ +
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCS 107
Query: 298 TYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEM 357
T+ TLING CK + + + + M +G+ N Y +I GF + A + EM
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 358 VLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYL 397
V G+ S T+ ++ LCS + +A + L
Sbjct: 168 VSNGVYSSSITF-------RDILPQLCSRKELRKAVAMLL 200
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 128 DILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGC 187
++++ + + RA Y EM + G+ P ++ N +I LCK + + R
Sbjct: 53 NMMIRFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA----------RKV 102
Query: 188 QPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIR 247
T+ TLING C+ V + LF EM +G +V+TYT+LIHG Q + A+
Sbjct: 103 SKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALD 162
Query: 248 LLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
+ +EM NG+ + T+ ++ LC +A+ +L
Sbjct: 163 IFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 77/181 (42%), Gaps = 23/181 (12%)
Query: 299 YGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMV 358
Y +I+GLCK GKF EA I + + GL+P+ Y +I SS A EM+
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR----FSSLGRAEKLYAEMI 72
Query: 359 LGGISPSRATWSLHVR-------------------MHNTVVQGLCSNVDSPRAFQLYLSM 399
G+ P T++ + NT++ G C L+ M
Sbjct: 73 RRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGYCKATRVKDGMNLFCEM 132
Query: 400 RTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
RGI + T+ LI F + GD N A I +EM+S+G + ++ L RK++
Sbjct: 133 YRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKEL 192
Query: 460 R 460
R
Sbjct: 193 R 193
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 145/357 (40%), Gaps = 11/357 (3%)
Query: 22 IKAEKDINKAVLMFDSATAE---YSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQ 78
+K+E+D K +F + N F + T +SRL A + E LLE K
Sbjct: 45 LKSERDPEKLYNLFKANATNRLVIENRFAFEDT-----VSRLAGAGRLDFIEDLLEHQKT 99
Query: 79 ENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKR 138
E ++ I YG+ A+ F M+ + K + KS+ + +L +
Sbjct: 100 LPQGRREGFIVRIIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHT 159
Query: 139 AIAFYREM-RKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTL 197
F + K GI VS NI IK+ C+ +D A EM G PD TY TL
Sbjct: 160 IWEFLHDAPSKYGIDIDAVSFNIAIKSFCE-LGILDGAYMAMREMEKSGLTPDVVTYTTL 218
Query: 198 INGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGI 257
I+ L + L+N M KG P++ T+ I + +A LL M K +
Sbjct: 219 ISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQV 278
Query: 258 EPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVE 317
EP+ TY+ ++ G A + M K +PN+ Y T+I+ LCK G F A
Sbjct: 279 EPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYT 338
Query: 318 ILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVR 374
+ + PN ++ G D A I E+V + P R+ L ++
Sbjct: 339 MCKDCMRKKWYPNLDTVEMLLKGLVKKGQL-DQAKSIMELVHRRVPPFRSKQLLSLK 394
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 112/259 (43%), Gaps = 8/259 (3%)
Query: 175 ALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK-GFSPSVVTYTSLI 233
AL F M GC+ ++ + L + E ++ K G V++ I
Sbjct: 125 ALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAI 184
Query: 234 HGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNR 293
C+ L A + EM+K+G+ P+V TY+TL+ L K + L +MV K +
Sbjct: 185 KSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCK 244
Query: 294 PNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANF 353
PN+ T+ I L + +A ++L M ++P++ Y +I GF A A
Sbjct: 245 PNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERV 304
Query: 354 IDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDC 413
M G P+ ++++ T++ LC + A+ + + +DT +
Sbjct: 305 YTAMHGKGYKPN-------LKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEM 357
Query: 414 LIKCFCKRGDLNKAARILE 432
L+K K+G L++A I+E
Sbjct: 358 LLKGLVKKGQLDQAKSIME 376
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 158/349 (45%), Gaps = 14/349 (4%)
Query: 96 GRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSV 155
G++ R + +VF +M +K+Y +++ + V A+ + ++ GI +
Sbjct: 154 GKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDL 213
Query: 156 VSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFN 215
V+ + L+ LC+ K + GC D ++NG C +G+V EAK +
Sbjct: 214 VAFHGLLMWLCRYKHVEFAETLFCSRRREFGC--DIKAMNMILNGWCVLGNVHEAKRFWK 271
Query: 216 EMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGG 275
++ P VV+Y ++I+ + + LG+A+ L M P+V + ++D LC
Sbjct: 272 DIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKK 331
Query: 276 HSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQG--LKPNAGL 333
+A+E+ + K PN+VTY +L+ LCK + + E+++ M L+G PN
Sbjct: 332 RIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVT 391
Query: 334 YGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAF 393
+ ++ Y + +D +VL ++ ++ + ++N + + +
Sbjct: 392 FSYLL-------KYSQRSKDVD-IVLERMAKNKC--EMTSDLYNLMFRLYVQWDKEEKVR 441
Query: 394 QLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPD 442
+++ M G+ + T+ I +G + +A +EM+S G VP+
Sbjct: 442 EIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPE 490
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/330 (20%), Positives = 133/330 (40%), Gaps = 61/330 (18%)
Query: 191 SYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLE 250
S Y +++ L +M E ++F+EM ++ + TY L++ + + EA+ + E
Sbjct: 143 SMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFE 202
Query: 251 EMKKNGIEPNVFTYSTLMDGLCKGGH-----------------SLQAMELL--------- 284
K+ GI+ ++ + L+ LC+ H ++AM ++
Sbjct: 203 RRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGN 262
Query: 285 --------EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGK 336
+ ++ RP++V+YGT+IN L K+GK +A+E+ M P+ +
Sbjct: 263 VHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNN 322
Query: 337 IISGFCAASSYQDAANFIDEMVLGGISPSRATWS------LHVRMHNTVVQ--------- 381
+I C +A E+ G P+ T++ +R V +
Sbjct: 323 VIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKG 382
Query: 382 GLCSNVDSPRAFQLYLSMRTRGISIEI------------DTFDCLIKCFCKRGDLNKAAR 429
G CS D ++ L S R++ + I + D ++ + + + + K
Sbjct: 383 GSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVRE 442
Query: 430 ILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
I EM G PD+ + + + GL + K+
Sbjct: 443 IWSEMERSGLGPDQRTYTIRIHGLHTKGKI 472
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 91/173 (52%), Gaps = 9/173 (5%)
Query: 212 ELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGL 271
ELF EM ++G + VTYT+LI G+ Q+ + A + +EM +G+ P++ TY+ L+DGL
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 272 CKGGHSLQAM---------ELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRM 322
CK G +A+ +L + K +PN+VTY T+I+G CK+G EA + +M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 323 RLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRM 375
+ G P++G Y +I +A I EM + +T+ L M
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDM 174
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 9/171 (5%)
Query: 176 LQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHG 235
+++F EM RG ++ TY TLI GL + G A+E+F EM G P ++TY L+ G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 236 MCQSDNLGEAI---------RLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEM 286
+C++ L +A+ L + G++PNV TY+T++ G CK G +A L
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 287 MVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKI 337
M P+ TY TLI ++G + + E++ MR +A YG +
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 171
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 11/185 (5%)
Query: 140 IAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLIN 199
+ +REM + G+ + V+ LI+ L + + D A +IF EM + G PD TY L++
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGD-CDMAQEIFKEMVSDGVPPDIMTYNILLD 59
Query: 200 GLCR---------MGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLE 250
GLC+ G V + +LF + KG P+VVTYT++I G C+ EA L
Sbjct: 60 GLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFR 119
Query: 251 EMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEG 310
+MK++G P+ TY+TL+ + G + EL++ M + + TYG L+ + +G
Sbjct: 120 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG-LVTDMLHDG 178
Query: 311 KFSEA 315
+ +
Sbjct: 179 RLDKG 183
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 8/188 (4%)
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
+ +F +M L +Y T+I L + A ++EM G+PP +++ NIL+
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 165 LCKNKE--------TIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNE 216
LCKN + ++ +F + +G +P+ TY T+I+G C+ G EA LF +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 217 MEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGH 276
M+E G P TY +LI + + + L++EM+ + TY + D L G
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRL 180
Query: 277 SLQAMELL 284
+E+L
Sbjct: 181 DKGFLEML 188
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 9/140 (6%)
Query: 246 IRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING 305
+ L EM + G+ N TY+TL+ GL + G A E+ + MV+ P+++TY L++G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 306 LCKEGKFSEAV---------EILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDE 356
LCK GK +A+ ++ + L+G+KPN Y +ISGFC ++A +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 357 MVLGGISPSRATWSLHVRMH 376
M G P T++ +R H
Sbjct: 121 MKEDGPLPDSGTYNTLIRAH 140
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 16/144 (11%)
Query: 316 VEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRM 375
+E+ M +GL N Y +I G A A EMV G+ P T+
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTY------ 54
Query: 376 HNTVVQGLCSNVDSPRA---------FQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNK 426
N ++ GLC N +A + L+ S+ +G+ + T+ +I FCK+G +
Sbjct: 55 -NILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEE 113
Query: 427 AARILEEMISDGCVPDKGIWDVVM 450
A + +M DG +PD G ++ ++
Sbjct: 114 AYTLFRKMKEDGPLPDSGTYNTLI 137
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 153/333 (45%), Gaps = 8/333 (2%)
Query: 51 TTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHK 110
+ + ++ S L + + A +LE MK + + ++ + R + + ++F +
Sbjct: 249 SIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKE 308
Query: 111 MEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKE 170
+L + L V+ + V E +++ + MRK + + L ++ K +
Sbjct: 309 AGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQR- 367
Query: 171 TIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYT 230
A++++ C+ TY IN CR+ ++A+ LF+EM +KGF VV Y+
Sbjct: 368 GFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYS 427
Query: 231 SLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTK 290
+++ ++ L +A+RL+ +MK+ G +PN++ Y++L+D + +A ++ + M
Sbjct: 428 NIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRA 487
Query: 291 HNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDA 350
P+ V+Y ++I+ + + VE+ R+ K + + G ++ F S +
Sbjct: 488 KVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDEL 547
Query: 351 ANFIDEMVLGGISPSRATWSLHVRMHNTVVQGL 383
+ +M + G L R++++ + L
Sbjct: 548 MRLLQDMKVEGT-------RLDARLYSSALNAL 573
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 148/355 (41%), Gaps = 12/355 (3%)
Query: 105 IRVFHKMEDFQLKFTQKS----YLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNI 160
+ +F + + +L F K Y V L + A+ EM+ GIP S ++
Sbjct: 229 VELFQEFKSQRLSFLAKESGSIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSM 288
Query: 161 LIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
LI+A + +E + + ++F E + D ++ R G++ E+ M +
Sbjct: 289 LIRAFAEAREVVITE-KLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKA 347
Query: 221 GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQA 280
+ ++++G + EA+++ E K E TY+ ++ C+ +A
Sbjct: 348 ELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKA 407
Query: 281 MELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISG 340
L + MV K +V Y +++ K + S+AV ++ +M+ +G KPN +Y +I
Sbjct: 408 EMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDM 467
Query: 341 FCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMR 400
A + A EM + P + +++ + +N + + R +LY R
Sbjct: 468 HGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYN-------RSKELERCVELYQEFR 520
Query: 401 TRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWD 455
I+ ++ F K +++ R+L++M +G D ++ + L D
Sbjct: 521 MNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSSALNALRD 575
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/297 (18%), Positives = 123/297 (41%), Gaps = 1/297 (0%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
G + ++I A + E L + + + ++ L + Y R
Sbjct: 278 GIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETT 337
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
+ V M +LK T +++ ++ A+ Y K V+ I I A
Sbjct: 338 LEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINA 397
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
C+ E + A +F EM +G Y +++ + +S+A L +M+++G P
Sbjct: 398 YCR-LEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKP 456
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
++ Y SLI ++ +L A ++ +EMK+ + P+ +Y++++ + + +EL
Sbjct: 457 NIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELY 516
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGF 341
+ + + G ++ K + E + +L M+++G + +A LY ++
Sbjct: 517 QEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSSALNAL 573
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 102/245 (41%), Gaps = 36/245 (14%)
Query: 76 MKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENH 135
M++ VT+ IL I G+ + +A++V+ + + Q +Y I+
Sbjct: 344 MRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEK 403
Query: 136 VKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYG 195
+A + EM K G VV+ + ++ K + D A+++ +M RGC+P+ + Y
Sbjct: 404 YNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSD-AVRLMAKMKQRGCKPNIWIYN 462
Query: 196 TLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNL------------- 242
+LI+ R + A++++ EM+ P V+YTS+I +S L
Sbjct: 463 SLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMN 522
Query: 243 ----------------------GEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQA 280
E +RLL++MK G + YS+ ++ L G + Q
Sbjct: 523 RGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSSALNALRDAGLNSQI 582
Query: 281 MELLE 285
L E
Sbjct: 583 RWLQE 587
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/394 (20%), Positives = 168/394 (42%), Gaps = 12/394 (3%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
GF + FG ++ A ++ M V+ ++ + G+ R P A
Sbjct: 207 GFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKA 266
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
+ +F+KM +Y ++I V+ V A +++ G+ P +V N++I
Sbjct: 267 VDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHT 326
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
+ + A ++F + R PD YT+ ++++ LC G + + + G
Sbjct: 327 YTRLGR-FEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI---GTDF 382
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
+VT L + + A+++L M + +TY+ + LC+GG A+++
Sbjct: 383 DLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMY 442
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAA 344
++++ + + + +I+ L + GK++ AV + R L+ + Y I G A
Sbjct: 443 KIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRA 502
Query: 345 SSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGI 404
++A + +M GGI P+R R + T++ GLC ++ + ++ G+
Sbjct: 503 KRIEEAYSLCCDMKEGGIYPNR-------RTYRTIISGLCKEKETEKVRKILRECIQEGV 555
Query: 405 SIEIDT-FDCLIKCFCKRGDLNKAARILEEMISD 437
++ +T F RGD ++ + E+ S+
Sbjct: 556 ELDPNTKFQVYSLLSRYRGDFSEFRSVFEKWKSE 589
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 137/307 (44%), Gaps = 7/307 (2%)
Query: 44 NGFRHDHTTFGVMISRLVA-ANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPL 102
N + HD F M+ + ++ S + ++ER+K C + + L + + R H
Sbjct: 66 NNYFHDDRAFDHMVGVVEKLTREYYSIDRIIERLKISGCEIKPRVFLLLLEIFWRGHIYD 125
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
AI V+ M F ++ ++D+ + N V A+ + +R + S +I +
Sbjct: 126 KAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFR----NFFSFDIAL 181
Query: 163 KALCK--NKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
C + + + M G P+ +G ++ CR G VSEA ++ M
Sbjct: 182 SHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICS 241
Query: 221 GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQA 280
G S SV ++ L+ G +S +A+ L +M + G PN+ TY++L+ G G +A
Sbjct: 242 GISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEA 301
Query: 281 MELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISG 340
+L + ++ P++V +I+ + G+F EA ++ + + L P+ + I+S
Sbjct: 302 FTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSS 361
Query: 341 FCAASSY 347
C + +
Sbjct: 362 LCLSGKF 368
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 134/321 (41%), Gaps = 40/321 (12%)
Query: 150 GIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSE 209
GI SV ++L+ ++ E A+ +F++M GC P+ TY +LI G +G V E
Sbjct: 242 GISVSVNVWSMLVSGFFRSGEP-QKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDE 300
Query: 210 AKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMD 269
A + ++++ +G +P +V +IH + EA ++ ++K + P+ +T+++++
Sbjct: 301 AFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILS 360
Query: 270 GLC--------------------------------KGGHSLQAMELLEMMVTKHNRPNMV 297
LC K G++ A+++L +M K +
Sbjct: 361 SLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCY 420
Query: 298 TYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEM 357
TY ++ LC+ G A+++ + + +A + II Y A +
Sbjct: 421 TYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRC 480
Query: 358 VLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKC 417
+L + L V + ++GL A+ L M+ GI T+ +I
Sbjct: 481 IL-------EKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISG 533
Query: 418 FCKRGDLNKAARILEEMISDG 438
CK + K +IL E I +G
Sbjct: 534 LCKEKETEKVRKILRECIQEG 554
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 157/353 (44%), Gaps = 22/353 (6%)
Query: 106 RVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKAL 165
R+ +++ + + +L +++I + +AI Y M G P+ ++N+++
Sbjct: 94 RIIERLKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVN 153
Query: 166 CKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSE---AKELFNEMEEKGF 222
K ++ AL+IF + R + +++ ++ C G + K + M +GF
Sbjct: 154 FK-LNVVNGALEIFEGIRFR----NFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGF 208
Query: 223 SPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAME 282
P+ + ++ C++ + EA +++ M +GI +V +S L+ G + G +A++
Sbjct: 209 YPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVD 268
Query: 283 LLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFC 342
L M+ PN+VTY +LI G G EA +L +++ +GL P+ L +I +
Sbjct: 269 LFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYT 328
Query: 343 AASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTR 402
+++A + + P + T++ +++ LC + F L + T
Sbjct: 329 RLGRFEEARKVFTSLEKRKLVPDQYTFA-------SILSSLCLS----GKFDLVPRI-TH 376
Query: 403 GISIEID--TFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
GI + D T + L CF K G + A ++L M D + V + L
Sbjct: 377 GIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSAL 429
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 106/210 (50%), Gaps = 7/210 (3%)
Query: 154 SVVSLNILIKALCKNKETIDSALQIFHEM-----PNRGCQPDSYTYGTLINGLCRMGSVS 208
S ++ N +++AL +N + D AL++F + P R + T+ ++NG C G
Sbjct: 309 SAMAYNYVLEALSENGK-FDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFE 367
Query: 209 EAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLM 268
EA E+F +M + SP +++ +L++ +C ++ L EA +L EM++ ++P+ +TY LM
Sbjct: 368 EAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLM 427
Query: 269 DGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLK 328
D K G + + MV + RPN+ Y L + L K GK +A D M + LK
Sbjct: 428 DTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFD-MMVSKLK 486
Query: 329 PNAGLYGKIISGFCAASSYQDAANFIDEMV 358
+ Y I+ A + +DEM+
Sbjct: 487 MDDEAYKFIMRALSEAGRLDEMLKIVDEML 516
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 166/362 (45%), Gaps = 23/362 (6%)
Query: 91 ICRGYGRVHRP---LDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMR 147
I + Y V +P L+ ++F +++ L + ++ ++ LV +++++A+ +M
Sbjct: 171 IFQAYLDVRKPEIALEHYKLF--IDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMA 228
Query: 148 KMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR--GCQPDSYTYGTLINGLCRMG 205
G V + L+ KN + D L+++ E+ + G D YG L+ G
Sbjct: 229 VKGFVVDPVVYSYLMMGCVKNSDA-DGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKE 287
Query: 206 SVSEAKELFNEM--EEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEP---- 259
EA E + E E S + Y ++ + ++ EA++L + +KK P
Sbjct: 288 MEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLA 347
Query: 260 -NVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEI 318
N+ T++ +++G C GG +AME+ M P+ +++ L+N LC +EA ++
Sbjct: 348 VNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKL 407
Query: 319 LDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNT 378
M + +KP+ YG ++ + A + MV + P+ A ++ R+ +
Sbjct: 408 YGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYN---RLQDQ 464
Query: 379 VVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDG 438
+++ +D ++F M + ++ + + +++ + G L++ +I++EM+ D
Sbjct: 465 LIK--AGKLDDAKSF---FDMMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDD 519
Query: 439 CV 440
V
Sbjct: 520 TV 521
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 144/313 (46%), Gaps = 20/313 (6%)
Query: 146 MRKMGIPPSVVSLNILIKAL--CKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCR 203
+ + GI P++++ N++ +A + E ++F + N P T+ L+ GL
Sbjct: 156 INQAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLF--IDNAPLNPSIATFRILVKGLVS 213
Query: 204 MGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKN--GIEPNV 261
++ +A E+ +M KGF V Y+ L+ G ++ + ++L +E+K+ G +
Sbjct: 214 NDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDG 273
Query: 262 FTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNM--VTYGTLINGLCKEGKFSEAVEIL 319
Y LM G +AME E V ++++ M + Y ++ L + GKF EA+++
Sbjct: 274 VVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLF 333
Query: 320 DRMRLQGLKP-----NAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVR 374
D ++ + P N G + +++G+CA +++A +M G S T S
Sbjct: 334 DAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQM--GDFKCSPDTLSF--- 388
Query: 375 MHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEM 434
N ++ LC N A +LY M + + + T+ L+ K G +++ A + M
Sbjct: 389 --NNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTM 446
Query: 435 ISDGCVPDKGIWD 447
+ P+ +++
Sbjct: 447 VESNLRPNLAVYN 459
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 140/323 (43%), Gaps = 23/323 (7%)
Query: 151 IPPSVVSL--------NILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLC 202
+P SV +L N ++K L + + ++AL H + + C+P +T T++
Sbjct: 84 LPESVSALVGKRLDLHNHILK-LIRENDLEEAALYTRHSVYS-NCRPTIFTVNTVLAAQL 141
Query: 203 RMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNG-IEPNV 261
R +L + + G +P+++TY + A+ + N + P++
Sbjct: 142 RQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSI 201
Query: 262 FTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDR 321
T+ L+ GL + +AME+ E M K + V Y L+ G K +++
Sbjct: 202 ATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQE 261
Query: 322 MR--LQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTV 379
++ L G + +YG+++ G+ ++A +E V G S R + +N V
Sbjct: 262 LKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAV-GENSKVR----MSAMAYNYV 316
Query: 380 VQGLCSNVDSPRAFQLYLSMR-----TRGISIEIDTFDCLIKCFCKRGDLNKAARILEEM 434
++ L N A +L+ +++ R +++ + TF+ ++ +C G +A + +M
Sbjct: 317 LEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQM 376
Query: 435 ISDGCVPDKGIWDVVMGGLWDRK 457
C PD ++ +M L D +
Sbjct: 377 GDFKCSPDTLSFNNLMNQLCDNE 399
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 81/148 (54%)
Query: 185 RGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGE 244
+G + D +TY T+++ G + +F+ M+EKG VTYTSLIH + S ++
Sbjct: 116 KGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDG 175
Query: 245 AIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLIN 304
A+RL EEM+ NG EP V +Y+ M L G +A E+ + M+ PN TY L+
Sbjct: 176 AMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLME 235
Query: 305 GLCKEGKFSEAVEILDRMRLQGLKPNAG 332
L GK EA++I +M+ G++P+
Sbjct: 236 YLVATGKCEEALDIFFKMQEIGVQPDKA 263
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 105/469 (22%), Positives = 182/469 (38%), Gaps = 56/469 (11%)
Query: 15 SSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLE 74
S ++ +++KA + KA L F+ A GF+HDH T+ M+ A + +S +
Sbjct: 89 SHIINRVLKAHPPMQKAWLFFNWAAQ--IKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFH 146
Query: 75 RMKQENCV---VTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILV 131
MK++ + VT L+ G V A+R++ +M D + T SY + +L
Sbjct: 147 LMKEKGVLIDTVTYTSLIHWVSSSGDVD---GAMRLWEEMRDNGCEPTVVSYTAYMKMLF 203
Query: 132 EENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDS 191
+ V+ A Y+EM + + P+ + +L++ L + + AL IF +M G QPD
Sbjct: 204 ADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKC-EEALDIFFKMQEIGVQPDK 262
Query: 192 YTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEE 251
LI + G S + M+E G V+ Y + + GE+ LL E
Sbjct: 263 AACNILIAKALKFGETSFMTRVLVYMKENGV---VLRYPIFVEALETLKAAGESDDLLRE 319
Query: 252 MK------------------------KNGIEPNVFTYSTLMDGLCKGGHSLQAME-LLEM 286
+ KN + V + LM +L A++ LL
Sbjct: 320 VNSHISVESLCSSDIDETPTAEVNDTKNSDDSRVISSVLLM------KQNLVAVDILLNQ 373
Query: 287 MVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASS 346
M ++ + + +I C + A D G+ Y +I F ++
Sbjct: 374 MRDRNIKLDSFVVSAIIETNCDRCRTEGASLAFDYSLEMGIHLKKSAYLALIGNFLRSNE 433
Query: 347 YQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLY--LSMRTRGI 404
+ EMV +A SL ++ L A ++ L +G+
Sbjct: 434 LPKVIEVVKEMV-------KAQHSLGCYQGAMLIHRLGFGRRPRLAADVFDLLPDDQKGV 486
Query: 405 SIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
+ + L+ + G KA +IL EM +P G +DV++ GL
Sbjct: 487 A----AYTALMDVYISAGSPEKAMKILREMREREIMPSLGTYDVLLSGL 531
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 85/196 (43%), Gaps = 2/196 (1%)
Query: 178 IFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMC 237
+ ++M +R + DS+ +I C A F+ E G Y +LI
Sbjct: 370 LLNQMRDRNIKLDSFVVSAIIETNCDRCRTEGASLAFDYSLEMGIHLKKSAYLALIGNFL 429
Query: 238 QSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMV 297
+S+ L + I +++EM K + + L+ L G A ++ +++ ++ +
Sbjct: 430 RSNELPKVIEVVKEMVKAQHSLGCYQGAMLIHRLGFGRRPRLAADVFDLL--PDDQKGVA 487
Query: 298 TYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEM 357
Y L++ G +A++IL MR + + P+ G Y ++SG S +Q + +
Sbjct: 488 AYTALMDVYISAGSPEKAMKILREMREREIMPSLGTYDVLLSGLEKTSDFQKEVALLRKE 547
Query: 358 VLGGISPSRATWSLHV 373
++ +R ++HV
Sbjct: 548 KKSLVASARFRENVHV 563
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 145/308 (47%), Gaps = 43/308 (13%)
Query: 153 PSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKE 212
P V LI LCK + I A ++F +P R D T+ +I G ++G + EA+E
Sbjct: 44 PRVPQPEWLIGELCKVGK-IAEARKLFDGLPER----DVVTWTHVITGYIKLGDMREARE 98
Query: 213 LFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLC 272
LF+ ++ + +VVT+T+++ G +S L A L +EM E NV +++T++DG
Sbjct: 99 LFDRVDSR---KNVVTWTAMVSGYLRSKQLSIAEMLFQEMP----ERNVVSWNTMIDGYA 151
Query: 273 KGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAG 332
+ G +A+EL + M + N+V++ +++ L + G+ EA+ + +RM + +
Sbjct: 152 QSGRIDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVS--- 204
Query: 333 LYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRA 392
+ ++ G +A D M P R S N ++ G N A
Sbjct: 205 -WTAMVDGLAKNGKVDEARRLFDCM------PERNIISW-----NAMITGYAQNNRIDEA 252
Query: 393 FQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGI--WDVVM 450
QL+ M R + +++ +I F + ++NKA + + M P+K + W ++
Sbjct: 253 DQLFQVMPERDFA----SWNTMITGFIRNREMNKACGLFDRM------PEKNVISWTTMI 302
Query: 451 GGLWDRKK 458
G + K+
Sbjct: 303 TGYVENKE 310
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/419 (20%), Positives = 169/419 (40%), Gaps = 91/419 (21%)
Query: 27 DINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTED 86
D+ +A +FD + R + T+ M+S + + Q AE L + M + N V
Sbjct: 92 DMREARELFDRVDS------RKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWN- 144
Query: 87 ILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREM 146
T+ GY + R A+ +F +M + + S+ +++ LV+ + A+ + M
Sbjct: 145 ---TMIDGYAQSGRIDKALELFDEMPERNIV----SWNSMVKALVQRGRIDEAMNLFERM 197
Query: 147 RKMGIPP---------------------------SVVSLNILIKALCKNKETIDSALQIF 179
+ + +++S N +I +N ID A Q+F
Sbjct: 198 PRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNR-IDEADQLF 256
Query: 180 HEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQS 239
MP R D ++ T+I G R +++A LF+ M EK +V+++T++I G ++
Sbjct: 257 QVMPER----DFASWNTMITGFIRNREMNKACGLFDRMPEK----NVISWTTMITGYVEN 308
Query: 240 DNLGEAIRLLEEMKKNG-IEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVT 298
EA+ + +M ++G ++PNV TY +++ ++ ++ +++ ++ N +
Sbjct: 309 KENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIV 368
Query: 299 YGTLINGLCKEGKF---------------------------------SEAVEILDRMRLQ 325
L+N K G+ EA+E+ ++MR
Sbjct: 369 TSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKH 428
Query: 326 GLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLC 384
G KP+A Y ++ A + F ++V P R H T + LC
Sbjct: 429 GFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREE-------HYTCLVDLC 480
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 115/250 (46%), Gaps = 32/250 (12%)
Query: 154 SVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKEL 213
+VV+ ++ ++K+ + A +F EMP R ++ T+I+G + G + +A EL
Sbjct: 108 NVVTWTAMVSGYLRSKQ-LSIAEMLFQEMPERNV----VSWNTMIDGYAQSGRIDKALEL 162
Query: 214 FNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCK 273
F+EM E+ ++V++ S++ + Q + EA+ L E M + +V +++ ++DGL K
Sbjct: 163 FDEMPER----NIVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAK 214
Query: 274 GGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGL 333
G +A L + M + N++++ +I G + + EA ++ M +
Sbjct: 215 NGKVDEARRLFDCMPER----NIISWNAMITGYAQNNRIDEADQLFQVMPERDFAS---- 266
Query: 334 YGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAF 393
+ +I+GF A D M + +W+ T++ G N ++ A
Sbjct: 267 WNTMITGFIRNREMNKACGLFDRMPEKNV----ISWT-------TMITGYVENKENEEAL 315
Query: 394 QLYLSMRTRG 403
++ M G
Sbjct: 316 NVFSKMLRDG 325
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 136/312 (43%), Gaps = 27/312 (8%)
Query: 49 DHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVF 108
D ++ MI+ + + A GL +RM ++N + T+ GY +A+ VF
Sbjct: 263 DFASWNTMITGFIRNREMNKACGLFDRMPEKNVIS----WTTMITGYVENKENEEALNVF 318
Query: 109 HKM-EDFQLKFTQKSYLTVIDI------LVEENHVKRAIAFYREMRKMGIPPSVVSLNIL 161
KM D +K +Y++++ LVE + + I+ SV N +
Sbjct: 319 SKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLIS-----------KSVHQKNEI 367
Query: 162 IKALCKNKETIDSALQIFHEMPNRG--CQPDSYTYGTLINGLCRMGSVSEAKELFNEMEE 219
+ + N + L +M + G CQ D ++ ++I G EA E++N+M +
Sbjct: 368 VTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRK 427
Query: 220 KGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQ 279
GF PS VTY +L+ + + + + +++ ++ P + T + LC G + +
Sbjct: 428 HGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLC--GRAGR 485
Query: 280 AMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIIS 339
++ + R + YG +++ + S A E++ ++ L+ +AG Y + +
Sbjct: 486 LKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKV-LETGSDDAGTYVLMSN 544
Query: 340 GFCAASSYQDAA 351
+ A ++AA
Sbjct: 545 IYAANGKREEAA 556
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 177/402 (44%), Gaps = 29/402 (7%)
Query: 52 TFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKM 111
++ M+S V + A + + M + + V +++ GY + +A+ + +
Sbjct: 115 SWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVI----GYAQDGNLHEALWFYKEF 170
Query: 112 EDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKET 171
+KF + S+ ++ V+ ++ + ++ G +VV +I A K +
Sbjct: 171 RRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQ- 229
Query: 172 IDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTS 231
++SA + F EM + D + + TLI+G ++G + A++LF EM EK + V++T+
Sbjct: 230 MESAKRCFDEMTVK----DIHIWTTLISGYAKLGDMEAAEKLFCEMPEK----NPVSWTA 281
Query: 232 LIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKH 291
LI G + + A+ L +M G++P FT+S+ + E+ M+ +
Sbjct: 282 LIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTN 341
Query: 292 NRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAA 351
RPN + +LI+ K G + + R+ K + + +IS A
Sbjct: 342 VRPNAIVISSLIDMYSKSGSLEASERVF---RICDDKHDCVFWNTMISALAQHGLGHKAL 398
Query: 352 NFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVD-SPRAFQLYLSMRTR-GISIEID 409
+D+M+ + P+R T V+ CS+ + + SM + GI + +
Sbjct: 399 RMLDDMIKFRVQPNRTTL--------VVILNACSHSGLVEEGLRWFESMTVQHGIVPDQE 450
Query: 410 TFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMG 451
+ CLI + G + R +EEM + PDK IW+ ++G
Sbjct: 451 HYACLIDLLGRAGCFKELMRKIEEMPFE---PDKHIWNAILG 489
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 124/290 (42%), Gaps = 28/290 (9%)
Query: 136 VKRAIAFYREMRKMGIP-PSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTY 194
+K+ +R ++ G P+ + N LI K + ID A ++F +M R + Y++
Sbjct: 62 LKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPID-ACKVFDQMHLR----NLYSW 116
Query: 195 GTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKK 254
+++G + G + A+ +F+ M E+ VV++ +++ G Q NL EA+ +E ++
Sbjct: 117 NNMVSGYVKSGMLVRARVVFDSMPER----DVVSWNTMVIGYAQDGNLHEALWFYKEFRR 172
Query: 255 NGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSE 314
+GI+ N F+++ L+ K + ++ N+V ++I+ K G+
Sbjct: 173 SGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMES 232
Query: 315 AVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVR 374
A D M ++ + ++ +ISG+ + A EM P + S
Sbjct: 233 AKRCFDEMTVKDIH----IWTTLISGYAKLGDMEAAEKLFCEM------PEKNPVSWTAL 282
Query: 375 MHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDL 424
+ V QG RA L+ M G+ E TF C C +
Sbjct: 283 IAGYVRQG-----SGNRALDLFRKMIALGVKPEQFTFS---SCLCASASI 324
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 152/332 (45%), Gaps = 20/332 (6%)
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
+++ + M+ ++ +++ + +I E H Y+ +R+ S+ N LI
Sbjct: 331 LKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEISLSVCNHLIWL 390
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTY-------GTLINGLCRMGSVSEAKELFNEM 217
+ K K+ +AL+I+ ++ + G +P++ +Y L++ + G L N+M
Sbjct: 391 MGKAKKWW-AALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKM 449
Query: 218 EEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHS 277
E+KG P + +++ ++ AI++ + M NG +P V +Y L+ L KG
Sbjct: 450 EDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLY 509
Query: 278 LQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKI 337
+A + M+ PN+ Y T+ + L + KF+ +L M +G++P+ + +
Sbjct: 510 DEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAV 569
Query: 338 ISGFCAASSYQDAA-NFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLY 396
ISG CA + A + M + P+ T+ + +++ L ++ A++L+
Sbjct: 570 ISG-CARNGLSGVAYEWFHRMKSENVEPNEITYEM-------LIEALANDAKPRLAYELH 621
Query: 397 LSMRTRGISIEIDTFDCLIKCFCKRG---DLN 425
+ + G+ + +D ++K G DLN
Sbjct: 622 VKAQNEGLKLSSKPYDAVVKSAETYGATIDLN 653
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 102/488 (20%), Positives = 185/488 (37%), Gaps = 54/488 (11%)
Query: 10 PKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSA 69
P Q+ ++++ K +K + AV + D + S + S L A F A
Sbjct: 145 PLQVFCAMIKGFGK-DKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLLGAMRGFGEA 203
Query: 70 EGLLERMKQENCV---VTEDILLTICRGYGRVHRPL-------------------DAIRV 107
E +L+ M++E V VT + L+ I G + L A+ V
Sbjct: 204 EKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYSTALLV 263
Query: 108 FHKMEDFQLKFTQKSYLTVIDILVE--ENHVKRAIA------FYREMRKMGIPPSVVSLN 159
+ +MED + ++ VE E + KR I + E K+ +
Sbjct: 264 YRRMEDG---------MGALEFFVELREKYAKREIGNDVGYDWEFEFVKLENFIGRICYQ 314
Query: 160 ILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEE 219
++ + L K+ L++ + M + G +P + LI R KEL+ + E
Sbjct: 315 VMRRWLVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRE 374
Query: 220 KGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTY-------STLMDGLC 272
+ S+ LI M ++ A+ + E++ G EPN +Y + L+
Sbjct: 375 RFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAAS 434
Query: 273 KGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAG 332
K G + LL M K +P + ++ K + + A++I M G KP
Sbjct: 435 KRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVI 494
Query: 333 LYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRA 392
YG ++S Y +A + M+ GI P ++ + T+ L
Sbjct: 495 SYGALLSALEKGKLYDEAFRVWNHMIKVGIEP-------NLYAYTTMASVLTGQQKFNLL 547
Query: 393 FQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGG 452
L M ++GI + TF+ +I + G A M S+ P++ +++++
Sbjct: 548 DTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEA 607
Query: 453 LWDRKKVR 460
L + K R
Sbjct: 608 LANDAKPR 615
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 69/124 (55%), Gaps = 10/124 (8%)
Query: 217 MEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIE------PNVFTYSTLMDG 270
+++KG P V + ++I G + L A+ +++ +K+ E PN+F Y++L+
Sbjct: 138 LKDKGELPLQV-FCAMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLLGA 196
Query: 271 LCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPN 330
+ G +A ++L+ M + PN+VTY TL+ +EG+F +A+ ILD + +G +PN
Sbjct: 197 MRGFG---EAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPN 253
Query: 331 AGLY 334
Y
Sbjct: 254 PITY 257
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 99/230 (43%), Gaps = 25/230 (10%)
Query: 4 RTLFKWPKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAA 63
R +++W ++ + + ++ +K ++ AVL+ S +E TT + I + +
Sbjct: 436 RGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASE---------TTAAIQIFKAMVD 486
Query: 64 NQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSY 123
N ++ V++ LL+ G+++ +A RV++ M ++ +Y
Sbjct: 487 NG------------EKPTVISYGALLSALEK-GKLYD--EAFRVWNHMIKVGIEPNLYAY 531
Query: 124 LTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMP 183
T+ +L + +EM GI PSVV+ N +I +N + A + FH M
Sbjct: 532 TTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLS-GVAYEWFHRMK 590
Query: 184 NRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLI 233
+ +P+ TY LI L A EL + + +G S Y +++
Sbjct: 591 SENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVV 640
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 129/268 (48%), Gaps = 20/268 (7%)
Query: 90 TICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKM 149
+I Y ++ DAI + +ME LK ++ +++ + K AIA + M+
Sbjct: 160 SILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIA 219
Query: 150 GIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSE 209
G+ PS S++ L++A+ + + I + D Y TLI+ + G +
Sbjct: 220 GLKPSTSSISSLLQAVAEPGH-LKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPY 278
Query: 210 AKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMD 269
A+ +F+ M+ K ++V + SL+ G+ + L +A L+ M+K GI+P+ T+++L
Sbjct: 279 ARMVFDMMDAK----NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLAS 334
Query: 270 GLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKP 329
G G +A++++ M K PN+V++ + +G K G F A+++ +M+ +G+ P
Sbjct: 335 GYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGP 394
Query: 330 NAGLY---------------GKIISGFC 342
NA GK + GFC
Sbjct: 395 NAATMSTLLKILGCLSLLHSGKEVHGFC 422
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/383 (20%), Positives = 167/383 (43%), Gaps = 55/383 (14%)
Query: 69 AEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVID 128
A L + M + + + +I++ R G + A+ +F +M+ K + + ++
Sbjct: 42 ANKLFDEMPKRDDLAWNEIVMVNLRS-GNWEK---AVELFREMQFSGAKAYDSTMVKLLQ 97
Query: 129 ILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQ 188
+ + + + ++G+ +V N LI +N + ++ + ++F+ M +R
Sbjct: 98 VCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGK-LELSRKVFNSMKDRNLS 156
Query: 189 PDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRL 248
++ ++++ ++G V +A L +EME G P +VT+ SL+ G +AI +
Sbjct: 157 ----SWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAV 212
Query: 249 LEEMKKNGIEP-----------------------------------NVFTYSTLMDGLCK 273
L+ M+ G++P +V+ +TL+D K
Sbjct: 213 LKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIK 272
Query: 274 GGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGL 333
G+ A + +MM K N+V + +L++GL +A ++ RM +G+KP+A
Sbjct: 273 TGYLPYARMVFDMMDAK----NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAIT 328
Query: 334 YGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAF 393
+ + SG+ + A + I +M G++P+ +W+ + G N + A
Sbjct: 329 WNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWT-------AIFSGCSKNGNFRNAL 381
Query: 394 QLYLSMRTRGISIEIDTFDCLIK 416
++++ M+ G+ T L+K
Sbjct: 382 KVFIKMQEEGVGPNAATMSTLLK 404
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 185/441 (41%), Gaps = 73/441 (16%)
Query: 51 TTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILL--TICRGYGRVHRPLDAIRVF 108
+++ ++S A GLL+ M E C + DI+ ++ GY DAI V
Sbjct: 156 SSWNSILSSYTKLGYVDDAIGLLDEM--EICGLKPDIVTWNSLLSGYASKGLSKDAIAVL 213
Query: 109 HKMEDFQLKFTQKSYLTVIDILVEENHVK--RAIAFY----------------------- 143
+M+ LK + S +++ + E H+K +AI Y
Sbjct: 214 KRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKT 273
Query: 144 ------REMRKMGIPPSVVSLNILIKAL---CKNKETIDSALQIFHEMPNRGCQPDSYTY 194
R + M ++V+ N L+ L C K+ AL I M G +PD+ T+
Sbjct: 274 GYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDA--EALMI--RMEKEGIKPDAITW 329
Query: 195 GTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKK 254
+L +G +G +A ++ +M+EKG +P+VV++T++ G ++ N A+++ +M++
Sbjct: 330 NSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQE 389
Query: 255 NGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHN---RPNMV----TYGTLINGLC 307
G+ PN T STL+ L + LL H R N++ L++
Sbjct: 390 EGVGPNAATMSTLL-------KILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYG 442
Query: 308 KEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRA 367
K G A+EI ++ + L + ++ G+ ++ M+ G+ P
Sbjct: 443 KSGDLQSAIEIFWGIKNKSLAS----WNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAI 498
Query: 368 TWSLHVRMHNTVVQGLCSNVD-SPRAFQLYLSMRTR-GISIEIDTFDCLIKCFCKRGDLN 425
T+ T V +C N ++ + MR+R GI I+ C++ + G L+
Sbjct: 499 TF--------TSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLD 550
Query: 426 KAARILEEMISDGCVPDKGIW 446
+A ++ M PD IW
Sbjct: 551 EAWDFIQTM---SLKPDATIW 568
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 161/373 (43%), Gaps = 53/373 (14%)
Query: 13 ITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGL 72
+ ++L++ IK + A ++FD A+ + + ++S L A + AE L
Sbjct: 262 VETTLIDMYIKTGY-LPYARMVFDMMDAK-------NIVAWNSLVSGLSYACLLKDAEAL 313
Query: 73 LERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVE 132
+ RM++E ++ GY + +P A+ V KM++ + S+ + +
Sbjct: 314 MIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSK 373
Query: 133 ENHVKRAIAFYREMRKMGIPPSVVSLNILIKAL---------------CKNKETI----- 172
+ + A+ + +M++ G+ P+ +++ L+K L C K I
Sbjct: 374 NGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYV 433
Query: 173 --------------DSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEME 218
SA++IF + N+ ++ ++ G G E F+ M
Sbjct: 434 ATALVDMYGKSGDLQSAIEIFWGIKNKSLA----SWNCMLMGYAMFGRGEEGIAAFSVML 489
Query: 219 EKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMK-KNGIEPNVFTYSTLMDGLCKGGHS 277
E G P +T+TS++ S + E + + M+ + GI P + S ++D L + G+
Sbjct: 490 EAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYL 549
Query: 278 LQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKP-NAGLYGK 336
+A + ++ M K P+ +G ++ CK + E EI + RLQ L+P N+ Y
Sbjct: 550 DEAWDFIQTMSLK---PDATIWGAFLSS-CKIHRDLELAEIAWK-RLQVLEPHNSANYMM 604
Query: 337 IISGFCAASSYQD 349
+I+ + + ++D
Sbjct: 605 MINLYSNLNRWED 617
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 120/285 (42%), Gaps = 31/285 (10%)
Query: 175 ALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIH 234
A ++F EMP R D + ++ R G+ +A ELF EM+ G T L+
Sbjct: 42 ANKLFDEMPKR----DDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQ 97
Query: 235 GMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRP 294
+ E ++ + + G+E NV ++L+ + G +EL +
Sbjct: 98 VCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGK----LELSRKVFNSMKDR 153
Query: 295 NMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFI 354
N+ ++ ++++ K G +A+ +LD M + GLKP+ + ++SG+ + +DA +
Sbjct: 154 NLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVL 213
Query: 355 DEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSP------RAFQLYLSMRTRGISIEI 408
M + G+ PS ++ + L V P +A Y+ + +
Sbjct: 214 KRMQIAGLKPSTSS-----------ISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYV 262
Query: 409 DTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
+T LI + K G L A + + M + V W+ ++ GL
Sbjct: 263 ET--TLIDMYIKTGYLPYARMVFDMMDAKNIVA----WNSLVSGL 301
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 142/343 (41%), Gaps = 10/343 (2%)
Query: 96 GRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMG-IPPS 154
G +P A +F M LK T Y ++I + + + +A + M+ + P
Sbjct: 155 GNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPD 214
Query: 155 VVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELF 214
V + +LI CK D I EM G + TY T+I+G + G E + +
Sbjct: 215 VFTFTVLISCCCKLGR-FDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVL 273
Query: 215 NEMEEKGFS-PSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCK 273
+M E G S P V T S+I N+ + + G++P++ T++ L+ K
Sbjct: 274 ADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGK 333
Query: 274 GGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGL 333
G + +++ M + VTY +I K G+ + ++ +M+ QG+KPN+
Sbjct: 334 AGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSIT 393
Query: 334 YGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAF 393
Y +++ + A + + ++V + L N ++ D
Sbjct: 394 YCSLVNAYSKAGLVVKIDSVLRQIVNSDVV-------LDTPFFNCIINAYGQAGDLATMK 446
Query: 394 QLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMIS 436
+LY+ M R + TF +IK + G + + ++MIS
Sbjct: 447 ELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMIS 489
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 142/329 (43%), Gaps = 18/329 (5%)
Query: 121 KSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFH 180
K+Y + +L +A + M G+ P++ LI K+ E +D A
Sbjct: 145 KTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKS-ELLDKAFSTLE 203
Query: 181 EMPN-RGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQS 239
M + C+PD +T+ LI+ C++G K + EM G S VTY ++I G ++
Sbjct: 204 YMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKA 263
Query: 240 DNLGEAIRLLEEMKKNGIE-PNVFTYSTLMDGLCKGGHSLQAME----LLEMMVTKHNRP 294
E +L +M ++G P+V T ++++ G G +++ ME ++M +P
Sbjct: 264 GMFEEMESVLADMIEDGDSLPDVCTLNSII-GSYGNGRNMRKMESWYSRFQLMGV---QP 319
Query: 295 NMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFI 354
++ T+ LI K G + + ++D M + Y +I F A + +
Sbjct: 320 DITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVF 379
Query: 355 DEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCL 414
+M G+ P+ T+ V ++ GL +DS + + + ++ F+C+
Sbjct: 380 RKMKYQGVKPNSITYCSLVNAYSKA--GLVVKIDS-----VLRQIVNSDVVLDTPFFNCI 432
Query: 415 IKCFCKRGDLNKAARILEEMISDGCVPDK 443
I + + GDL + +M C PDK
Sbjct: 433 INAYGQAGDLATMKELYIQMEERKCKPDK 461
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 149/351 (42%), Gaps = 18/351 (5%)
Query: 26 KDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQ-ENC--- 81
K ++A L+F+ +E G + + +IS + A LE MK +C
Sbjct: 158 KQPDQASLLFEVMLSE---GLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPD 214
Query: 82 VVTEDILLTICRGYGRVHRPLDAIR-VFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAI 140
V T +L++ C GR D ++ + +M + + +Y T+ID + +
Sbjct: 215 VFTFTVLISCCCKLGR----FDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEME 270
Query: 141 AFYREMRKMGIP-PSVVSLNILIKALC--KNKETIDSALQIFHEMPNRGCQPDSYTYGTL 197
+ +M + G P V +LN +I + +N ++S F M G QPD T+ L
Sbjct: 271 SVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLM---GVQPDITTFNIL 327
Query: 198 INGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGI 257
I + G + + + ME++ FS + VTY +I ++ + + + +MK G+
Sbjct: 328 ILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGV 387
Query: 258 EPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVE 317
+PN TY +L++ K G ++ +L +V + + +IN + G + E
Sbjct: 388 KPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKE 447
Query: 318 ILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRAT 368
+ +M + KP+ + +I + A + +M+ I R T
Sbjct: 448 LYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMISSDIGKKRLT 498
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 163/354 (46%), Gaps = 33/354 (9%)
Query: 104 AIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIK 163
A R+F ED + ++ +ID V A+ ++ EM+K G+ + +++ ++K
Sbjct: 157 ASRLFDGAEDKDVV----TWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLK 212
Query: 164 ALCKNKETI--DSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKG 221
A K ++ S ++ E C D + +L++ + +A+++F+EM +
Sbjct: 213 AAGKVEDVRFGRSVHGLYLETGRVKC--DVFIGSSLVDMYGKCSCYDDAQKVFDEMPSR- 269
Query: 222 FSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAM 281
+VVT+T+LI G QS + + + EEM K+ + PN T S+++ G +
Sbjct: 270 ---NVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGR 326
Query: 282 ELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGF 341
+ M+ N TLI+ K G EA+ + +R+ + N + +I+GF
Sbjct: 327 RVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLH----EKNVYTWTAMINGF 382
Query: 342 CAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSN---VDSPRAFQLYLS 398
A +DA + M+ +SP+ T+ V C++ V+ R +L+LS
Sbjct: 383 AAHGYARDAFDLFYTMLSSHVSPNEVTF--------MAVLSACAHGGLVEEGR--RLFLS 432
Query: 399 MRTR-GISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMG 451
M+ R + + D + C++ F ++G L +A ++E M + P +W + G
Sbjct: 433 MKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPME---PTNVVWGALFG 483
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 135/307 (43%), Gaps = 30/307 (9%)
Query: 136 VKRAIAF--YREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYT 193
+ R ++F YR MR+ G+ PS + L+KA+ K +++ + Q + G D +
Sbjct: 83 LNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDS--NPFQFHAHIVKFGLDSDPFV 140
Query: 194 YGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMK 253
+LI+G G A LF+ E+K VVT+T++I G ++ + EA+ EMK
Sbjct: 141 RNSLISGYSSSGLFDFASRLFDGAEDK----DVVTWTAMIDGFVRNGSASEAMVYFVEMK 196
Query: 254 KNGIEPNVFTYSTLMDGLCK-----GGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCK 308
K G+ N T +++ K G S+ + L T + ++ +L++ K
Sbjct: 197 KTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYL----ETGRVKCDVFIGSSLVDMYGK 252
Query: 309 EGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRAT 368
+ +A ++ D M + N + +I+G+ + + +EM+ ++P+ T
Sbjct: 253 CSCYDDAQKVFDEMPSR----NVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKT 308
Query: 369 WSLHVRMHNTVVQGLCSNVDS-PRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKA 427
S V C++V + R +++ M I I LI + K G L +A
Sbjct: 309 LS--------SVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEA 360
Query: 428 ARILEEM 434
+ E +
Sbjct: 361 ILVFERL 367
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 141/341 (41%), Gaps = 20/341 (5%)
Query: 34 MFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICR 93
+FD A+ + D T+ MI V A MK+ E ++++ +
Sbjct: 153 LFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLK 212
Query: 94 GYGRVHRPLDAIRVFH--KMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGI 151
G+V + R H +E ++K +++D+ + + A + EM
Sbjct: 213 AAGKV-EDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEM----- 266
Query: 152 PPS--VVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSE 209
PS VV+ LI +++ D + +F EM P+ T ++++ +G++
Sbjct: 267 -PSRNVVTWTALIAGYVQSR-CFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHR 324
Query: 210 AKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMD 269
+ + M + + T+LI + L EAI + E + E NV+T++ +++
Sbjct: 325 GRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLH----EKNVYTWTAMIN 380
Query: 270 GLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQ-GLK 328
G G++ A +L M++ H PN VT+ +++ G E + M+ + ++
Sbjct: 381 GFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNME 440
Query: 329 PNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATW 369
P A Y ++ F ++A I+ M + P+ W
Sbjct: 441 PKADHYACMVDLFGRKGLLEEAKALIERMPM---EPTNVVW 478
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 81/151 (53%), Gaps = 3/151 (1%)
Query: 177 QIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGM 236
+IF +M G P++ +++GLC+ G V EA +LF M +KG P VV YT+++
Sbjct: 120 EIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAF 176
Query: 237 CQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNM 296
C++ + +A R+ +M+ NGI PN F+Y L+ GL A+ M+ + PN+
Sbjct: 177 CKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNV 236
Query: 297 VTYGTLINGLCKEGKFSEAVEILDRMRLQGL 327
T+ L++ LC+ +A +D + +G
Sbjct: 237 PTFVELVDALCRVKGVEQAQSAIDTLNQKGF 267
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 87/169 (51%), Gaps = 4/169 (2%)
Query: 101 PLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNI 160
P D+ +F KM++ L + + ++D L ++ V+ A+ + MR G P VV
Sbjct: 115 PEDSDEIFKKMKEGGLI---PNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTA 171
Query: 161 LIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
+++A CK I+ A +IF +M N G P++++YG L+ GL + +A +EM E
Sbjct: 172 VVEAFCK-AHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLES 230
Query: 221 GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMD 269
G SP+V T+ L+ +C+ + +A ++ + + G NV MD
Sbjct: 231 GHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMD 279
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Query: 143 YREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLC 202
+++M++ G+ P+ V++ + LCK+ + A+++F M ++G P+ Y ++ C
Sbjct: 122 FKKMKEGGLIPNAVAM---LDGLCKDG-LVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 203 RMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVF 262
+ + +AK +F +M+ G +P+ +Y L+ G+ + L +A+ EM ++G PNV
Sbjct: 178 KAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVP 237
Query: 263 TYSTLMDGLCKGGHSLQAMELLEMMVTK 290
T+ L+D LC+ QA ++ + K
Sbjct: 238 TFVELVDALCRVKGVEQAQSAIDTLNQK 265
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 64/122 (52%), Gaps = 3/122 (2%)
Query: 248 LLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLC 307
+ ++MK+ G+ PN ++DGLCK G +AM+L +M K P +V Y ++ C
Sbjct: 121 IFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 308 KEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRA 367
K K +A I +M+ G+ PNA YG ++ G + DA F EM+ G SP+
Sbjct: 178 KAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVP 237
Query: 368 TW 369
T+
Sbjct: 238 TF 239
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 3/155 (1%)
Query: 209 EAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLM 268
++ E+F +M+E G P+ V +++ G+C+ + EA++L M+ G P V Y+ ++
Sbjct: 117 DSDEIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVV 173
Query: 269 DGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLK 328
+ CK A + M PN +YG L+ GL +AV M G
Sbjct: 174 EAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHS 233
Query: 329 PNAGLYGKIISGFCAASSYQDAANFIDEMVLGGIS 363
PN + +++ C + A + ID + G +
Sbjct: 234 PNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFA 268
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
Query: 294 PNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANF 353
PN V +++GLCK+G EA+++ MR +G P +Y ++ FC A +DA
Sbjct: 132 PNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRI 188
Query: 354 IDEMVLGGISPSRATWSLHVRMHNTVVQGL--CSNVDSPRAFQLYLSMRTRGISIEIDTF 411
+M GI+P+ ++ + +VQGL C+ +D AF M G S + TF
Sbjct: 189 FRKMQNNGIAPNAFSYGV-------LVQGLYNCNMLDDAVAF--CSEMLESGHSPNVPTF 239
Query: 412 DCLIKCFCKRGDLNKAARILEEMISDG 438
L+ C+ + +A ++ + G
Sbjct: 240 VELVDALCRVKGVEQAQSAIDTLNQKG 266
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 81/151 (53%), Gaps = 3/151 (1%)
Query: 177 QIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGM 236
+IF +M G P++ +++GLC+ G V EA +LF M +KG P VV YT+++
Sbjct: 120 EIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAF 176
Query: 237 CQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNM 296
C++ + +A R+ +M+ NGI PN F+Y L+ GL A+ M+ + PN+
Sbjct: 177 CKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNV 236
Query: 297 VTYGTLINGLCKEGKFSEAVEILDRMRLQGL 327
T+ L++ LC+ +A +D + +G
Sbjct: 237 PTFVELVDALCRVKGVEQAQSAIDTLNQKGF 267
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 87/169 (51%), Gaps = 4/169 (2%)
Query: 101 PLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNI 160
P D+ +F KM++ L + + ++D L ++ V+ A+ + MR G P VV
Sbjct: 115 PEDSDEIFKKMKEGGLI---PNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTA 171
Query: 161 LIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
+++A CK I+ A +IF +M N G P++++YG L+ GL + +A +EM E
Sbjct: 172 VVEAFCK-AHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLES 230
Query: 221 GFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMD 269
G SP+V T+ L+ +C+ + +A ++ + + G NV MD
Sbjct: 231 GHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMD 279
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Query: 143 YREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLC 202
+++M++ G+ P+ V++ + LCK+ + A+++F M ++G P+ Y ++ C
Sbjct: 122 FKKMKEGGLIPNAVAM---LDGLCKDG-LVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 203 RMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVF 262
+ + +AK +F +M+ G +P+ +Y L+ G+ + L +A+ EM ++G PNV
Sbjct: 178 KAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVP 237
Query: 263 TYSTLMDGLCKGGHSLQAMELLEMMVTK 290
T+ L+D LC+ QA ++ + K
Sbjct: 238 TFVELVDALCRVKGVEQAQSAIDTLNQK 265
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 64/122 (52%), Gaps = 3/122 (2%)
Query: 248 LLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLC 307
+ ++MK+ G+ PN ++DGLCK G +AM+L +M K P +V Y ++ C
Sbjct: 121 IFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 308 KEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRA 367
K K +A I +M+ G+ PNA YG ++ G + DA F EM+ G SP+
Sbjct: 178 KAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVP 237
Query: 368 TW 369
T+
Sbjct: 238 TF 239
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 3/155 (1%)
Query: 209 EAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLM 268
++ E+F +M+E G P+ V +++ G+C+ + EA++L M+ G P V Y+ ++
Sbjct: 117 DSDEIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVV 173
Query: 269 DGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLK 328
+ CK A + M PN +YG L+ GL +AV M G
Sbjct: 174 EAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHS 233
Query: 329 PNAGLYGKIISGFCAASSYQDAANFIDEMVLGGIS 363
PN + +++ C + A + ID + G +
Sbjct: 234 PNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFA 268
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
Query: 294 PNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANF 353
PN V +++GLCK+G EA+++ MR +G P +Y ++ FC A +DA
Sbjct: 132 PNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRI 188
Query: 354 IDEMVLGGISPSRATWSLHVRMHNTVVQGL--CSNVDSPRAFQLYLSMRTRGISIEIDTF 411
+M GI+P+ ++ + +VQGL C+ +D AF M G S + TF
Sbjct: 189 FRKMQNNGIAPNAFSYGV-------LVQGLYNCNMLDDAVAF--CSEMLESGHSPNVPTF 239
Query: 412 DCLIKCFCKRGDLNKAARILEEMISDG 438
L+ C+ + +A ++ + G
Sbjct: 240 VELVDALCRVKGVEQAQSAIDTLNQKG 266
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 142/341 (41%), Gaps = 37/341 (10%)
Query: 46 FRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAI 105
F + + V + L QF+ E + M ++ + TI R + AI
Sbjct: 182 FPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAI 241
Query: 106 RVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKAL 165
F +M L + +Y ++D+ + V+ ++ Y G P ++ ++L K
Sbjct: 242 EWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMF 301
Query: 166 CKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPS 225
+ + D + EM + +P+ Y TL+ + R G A+ LFNEM E G +P+
Sbjct: 302 GEAGD-YDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPN 360
Query: 226 VVTYTSLIHGMCQSDNLGEAIRLLEEMKKN-------------------GIE-------- 258
T T+L+ ++ +A++L EEMK G+E
Sbjct: 361 EKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFN 420
Query: 259 ---------PNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKE 309
P+ F+Y+ +++ GG + +AMEL E M+ + N++ L+ L K
Sbjct: 421 DMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKA 480
Query: 310 GKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDA 350
+ + V + D +G+KP+ L G ++S S +DA
Sbjct: 481 KRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDA 521
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 118/299 (39%), Gaps = 45/299 (15%)
Query: 181 EMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSD 240
EM G + D+ TY T+I R ++A E F M + G P VTY++++ +S
Sbjct: 211 EMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSG 270
Query: 241 NLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYG 300
+ E + L E G +P+ +S L + G +L+ M + +PN+V Y
Sbjct: 271 KVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYN 330
Query: 301 TLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLG 360
TL+ + + GK A + + M GL PN ++ + A +DA +EM
Sbjct: 331 TLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEM--- 387
Query: 361 GISPSRATWSLHVRMHNTVVQGLCSNV--------------------------------- 387
W + ++NT++ +C+++
Sbjct: 388 ----KAKKWPMDFILYNTLL-NMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIY 442
Query: 388 ----DSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPD 442
+ +A +L+ M G+ + + CL++C K ++ + + I G PD
Sbjct: 443 GSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPD 501
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 118/276 (42%), Gaps = 9/276 (3%)
Query: 95 YGRVHRPLDAIRVFHKMEDFQLKFTQK-------SYLTVIDILVEENHVKRAIAFYREMR 147
Y + L R F +E+ L+ + +Y T+I N +AI ++ M
Sbjct: 189 YNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMY 248
Query: 148 KMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSV 207
K G+ P V+ + ++ K+ + ++ L ++ G +PD+ + L G
Sbjct: 249 KTGLMPDEVTYSAILDVYSKSGK-VEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDY 307
Query: 208 SEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTL 267
+ + EM+ P+VV Y +L+ M ++ G A L EM + G+ PN T + L
Sbjct: 308 DGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTAL 367
Query: 268 MDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQ-G 326
+ K + A++L E M K + + Y TL+N G EA + + M+
Sbjct: 368 VKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQ 427
Query: 327 LKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGI 362
+P+ Y +++ + + + A +EM+ G+
Sbjct: 428 CRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGV 463
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 102/233 (43%), Gaps = 8/233 (3%)
Query: 211 KELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDG 270
+E+ EM + G +TY+++I + + +AI E M K G+ P+ TYS ++D
Sbjct: 206 EEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDV 265
Query: 271 LCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPN 330
K G + + L E V +P+ + + L + G + +L M+ +KPN
Sbjct: 266 YSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPN 325
Query: 331 AGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSP 390
+Y ++ A A + +EM+ G++P+ T + V+++
Sbjct: 326 VVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWAR------- 378
Query: 391 RAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMI-SDGCVPD 442
A QL+ M+ + ++ ++ L+ G +A R+ +M S C PD
Sbjct: 379 DALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPD 431
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 10/193 (5%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENC---VVTEDILLTICRGYGRVHRP 101
G + T ++ A R A L E MK + + + LL +C G
Sbjct: 356 GLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEE-- 413
Query: 102 LDAIRVFHKM-EDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNI 160
+A R+F+ M E Q + SY +++I ++A+ + EM K G+ +V+
Sbjct: 414 -EAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTC 472
Query: 161 LIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEK 220
L++ L K K ID + +F RG +PD G L++ + S +A+++ +E
Sbjct: 473 LVQCLGKAKR-IDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERA 531
Query: 221 GFSPSVVTYTSLI 233
+ +VT+ +LI
Sbjct: 532 --NKKLVTFVNLI 542
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 168/412 (40%), Gaps = 33/412 (8%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
GF D MI+ + SA + + M + + V ++ GY + D
Sbjct: 162 GFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMI----SGYSQSGSFEDC 217
Query: 105 IRVFHKM---EDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNIL 161
+++ M DF K + ++V + + + + +++M + I + N +
Sbjct: 218 KKMYKAMLACSDF--KPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAV 275
Query: 162 IKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKG 221
I K ++D A +F EM + DS TYG +I+G G V EA LF+EME G
Sbjct: 276 IGFYAKCG-SLDYARALFDEMSEK----DSVTYGAIISGYMAHGLVKEAMALFSEMESIG 330
Query: 222 FSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAM 281
S T+ ++I G+ Q+++ E I EM + G PN T S+L+ L +
Sbjct: 331 LS----TWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGK 386
Query: 282 ELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGF 341
E+ + N+ ++I+ K G A + D + + L + II+ +
Sbjct: 387 EIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIA----WTAIITAY 442
Query: 342 CAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRT 401
A + D+M G P T + V+ + DS A ++ SM T
Sbjct: 443 AVHGDSDSACSLFDQMQCLGTKPDDVTLT-------AVLSAFAHSGDSDMAQHIFDSMLT 495
Query: 402 R-GISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGG 452
+ I ++ + C++ + G L+ A + +M D P +W ++ G
Sbjct: 496 KYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPID---PIAKVWGALLNG 544
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 155/358 (43%), Gaps = 11/358 (3%)
Query: 14 TSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLL 73
T SL+ + + K A+ MF E D + IS N E +
Sbjct: 178 TYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIW 237
Query: 74 ERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEE 133
MK + + TE + + R R A+ V+ +M + ++ + + +I +E
Sbjct: 238 RVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKE 297
Query: 134 NHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYT 193
A+ ++ M K G+ P++V+ N LI +L K + + +++ + + G +PD YT
Sbjct: 298 EKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGK-VGLVFKVYSVLKSLGHKPDEYT 356
Query: 194 YGTLINGLCRMGSVSEAKELFNEMEEKGFS--PSVVTYTSLIHGMCQSDNLGE-AIRLLE 250
+ L+ L + + +LF+ + + + T+++ CQ E A++LL
Sbjct: 357 WNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVS--CQKLGYWEKAVKLLY 414
Query: 251 EMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEG 310
EM+ +G+ + +Y+ ++ K S A+ + E M + +PN TY +L+ C G
Sbjct: 415 EMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRS-CIWG 473
Query: 311 KFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRAT 368
+ VE + L+ ++P+ LY I G C ++ A +M G+ P T
Sbjct: 474 SLWDEVEDI----LKKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKT 527
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 173/385 (44%), Gaps = 27/385 (7%)
Query: 27 DINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQE----NC- 81
DI KA +F+ + N H T+ +M+ + SA + +++E +C
Sbjct: 157 DIQKAFTVFEFMRKK-ENVTGH---TYSLMLKAVAEVKGCESALRMFRELEREPKRRSCF 212
Query: 82 -VVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAI 140
VV + +++C GR++ + R++ M+ T+ +Y ++ I V + A+
Sbjct: 213 DVVLYNTAISLC---GRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELAL 269
Query: 141 AFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLING 200
Y EM I ++ +I A C +E D AL+IF M +G +P+ TLIN
Sbjct: 270 DVYDEMVNNKISLREDAMYAMISA-CTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINS 328
Query: 201 LCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMK-KNGIEP 259
L + G V ++++ ++ G P T+ +L+ + +++ + ++L + ++ +N
Sbjct: 329 LGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCL 388
Query: 260 NVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEIL 319
N + Y+T M K G+ +A++LL M + +Y +I+ K K A+ +
Sbjct: 389 NEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVY 448
Query: 320 DRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTV 379
+ M + KPN Y ++ C S D E +L + P V ++N
Sbjct: 449 EHMAQRDCKPNTFTYLSLVRS-CIWGSLWDEV----EDILKKVEPD-------VSLYNAA 496
Query: 380 VQGLCSNVDSPRAFQLYLSMRTRGI 404
+ G+C + A +LY+ MR G+
Sbjct: 497 IHGMCLRREFKFAKELYVKMREMGL 521
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/421 (20%), Positives = 175/421 (41%), Gaps = 28/421 (6%)
Query: 49 DHTTFGVMISRLVAANQFRSAEGLLERMK----QENCVVTEDILLTICRGYGRVHRPLDA 104
+ T + +L ++ RSA L + M+ Q N L + R G + +
Sbjct: 106 NEETLSKRLRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRN-GDIQKAFTV 164
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPS---VVSLNIL 161
K E+ T +Y ++ + E + A+ +RE+ + S VV N
Sbjct: 165 FEFMRKKENV----TGHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTA 220
Query: 162 IKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKG 221
I +LC + +I+ M G TY L++ R G A ++++EM
Sbjct: 221 I-SLCGRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNK 279
Query: 222 FSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAM 281
S ++I + + A+++ + M K G++PN+ +TL++ L K G
Sbjct: 280 ISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVF 339
Query: 282 ELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKP-NAGLYGKIISG 340
++ ++ + ++P+ T+ L+ L K ++ + +++ D +R + L N LY +
Sbjct: 340 KVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVS 399
Query: 341 FCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMR 400
++ A + EM G++ S ++ +N V+ + S A +Y M
Sbjct: 400 CQKLGYWEKAVKLLYEMEGSGLTVSTSS-------YNLVISACEKSRKSKVALLVYEHMA 452
Query: 401 TRGISIEIDTFDCLIKCFCKRGDL-NKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
R T+ L++ C G L ++ IL+++ PD +++ + G+ R++
Sbjct: 453 QRDCKPNTFTYLSLVRS-CIWGSLWDEVEDILKKV-----EPDVSLYNAAIHGMCLRREF 506
Query: 460 R 460
+
Sbjct: 507 K 507
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 108/256 (42%), Gaps = 46/256 (17%)
Query: 21 LIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQEN 80
LI + K L+F + S G + D T+ +++ L AN++ L + ++ EN
Sbjct: 325 LINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSEN 384
Query: 81 -CVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRA 139
C + E + Y T + + + ++A
Sbjct: 385 LCCLNEYL-----------------------------------YNTAMVSCQKLGYWEKA 409
Query: 140 IAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLIN 199
+ EM G+ S S N++I A C+ AL ++ M R C+P+++TY +L+
Sbjct: 410 VKLLYEMEGSGLTVSTSSYNLVISA-CEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVR 468
Query: 200 GLCRMGSVSEAKELFNEMEE--KGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGI 257
C GS L++E+E+ K P V Y + IHGMC A L +M++ G+
Sbjct: 469 S-CIWGS------LWDEVEDILKKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGL 521
Query: 258 EPNVFTYSTLMDGLCK 273
EP+ T + ++ L K
Sbjct: 522 EPDGKTRAMMLQNLKK 537
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/443 (22%), Positives = 174/443 (39%), Gaps = 46/443 (10%)
Query: 53 FGVMISRLVAANQFRSAEGLLERMKQENCVVTE---DILLTICRGYGRVHRPLDAIRVFH 109
G+++ L + +F+ A LL+ +K V + +I + G ++ P D ++
Sbjct: 289 LGILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKIS 348
Query: 110 KMEDFQLKFTQKSYLT-----------VIDILVE----------------------ENHV 136
+E +L+ + + + V DIL E V
Sbjct: 349 PLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFV 408
Query: 137 KRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGT 196
A+ YR ++G P+ +S N LI LC N E+++ A + +RG T+ T
Sbjct: 409 DEALELYRSRSEIGFAPTAMSYNYLIHTLCAN-ESVEQAYDVLKGAIDRGHFLGGKTFST 467
Query: 197 LINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNG 256
L N LC G A+EL E+ P + +I +C + +A+ + E K+G
Sbjct: 468 LTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSG 527
Query: 257 IEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCK-EGKFSEA 315
++ + +++L+ G A +L+ M K P Y +I +C+ E
Sbjct: 528 VDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNF 587
Query: 316 VEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRM 375
L + +L + Y I G A + A D M GI+P+ A+ L
Sbjct: 588 FTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNIL---- 643
Query: 376 HNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMI 435
++Q N A + +R +G + + +I CK L+ A LEEM
Sbjct: 644 ---MLQSYLKNEKIADALHFFHDLREQG-KTKKRLYQVMIVGLCKANKLDDAMHFLEEMK 699
Query: 436 SDGCVPDKGIWDVVMGGLWDRKK 458
+G P ++V + L + +K
Sbjct: 700 GEGLQPSIECYEVNIQKLCNEEK 722
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 162/391 (41%), Gaps = 16/391 (4%)
Query: 36 DSATAEYSN----GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQEN--CVVTEDILL 89
D A + N G D + V+++ LV F S + + +++ C VT IL+
Sbjct: 199 DIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVRGFVCAVTHSILV 258
Query: 90 TICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKM 149
G++ D +R + ++D L + + A E++ +
Sbjct: 259 KKFCKQGKLDEAEDYLRALLPNDPAG---CGSGLGILVDALCSKRKFQEATKLLDEIKLV 315
Query: 150 GIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSE 209
G + NI I+AL K + A + P GC+ + + Y +++ L + ++
Sbjct: 316 GTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDG 375
Query: 210 AKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMD 269
++ EM +G SP+ T + + C++ + EA+ L + G P +Y+ L+
Sbjct: 376 VYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIH 435
Query: 270 GLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKP 329
LC QA ++L+ + + + T+ TL N LC +GK A E++ + L P
Sbjct: 436 TLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLP 495
Query: 330 NAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDS 389
KIIS C +DA + G+ S +M +++ G + +
Sbjct: 496 KRIAGCKIISALCDVGKVEDALMINELFNKSGVDTS-------FKMFTSLIYGSITLMRG 548
Query: 390 PRAFQLYLSMRTRGISIEIDTFDCLIKCFCK 420
A +L + M+ +G + + +I+C C+
Sbjct: 549 DIAAKLIIRMQEKGYTPTRSLYRNVIQCVCE 579
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 128/324 (39%), Gaps = 14/324 (4%)
Query: 139 AIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRG--CQPDSYTYGT 196
A+ + MR G+ ++L+ AL + K DS IF ++ RG C + T+
Sbjct: 201 ALQHFGNMRFRGLDLDSFGYHVLLNALVEEK-CFDSFDVIFDQISVRGFVC---AVTHSI 256
Query: 197 LINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNG 256
L+ C+ G + EA++ + + L+ +C EA +LL+E+K G
Sbjct: 257 LVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVG 316
Query: 257 IEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHN-RPNMVTYGTLINGLCKEGKFSEA 315
Y+ + L K G + L+ + + Y +++ L KE
Sbjct: 317 TVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGV 376
Query: 316 VEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRM 375
+IL M ++G+ PN + FC A F+DE + S S ++
Sbjct: 377 YDILTEMMVRGVSPNKKTMNAALCFFCKAG-------FVDEALELYRSRSEIGFAPTAMS 429
Query: 376 HNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMI 435
+N ++ LC+N +A+ + RG + TF L C +G + A ++
Sbjct: 430 YNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAA 489
Query: 436 SDGCVPDKGIWDVVMGGLWDRKKV 459
+P + ++ L D KV
Sbjct: 490 ERDLLPKRIAGCKIISALCDVGKV 513
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 4/167 (2%)
Query: 137 KRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGT 196
K A Y M + GI P+V S +++++ KN E I AL FH++ +G + Y
Sbjct: 620 KLARLVYDMMDRDGITPTVASNILMLQSYLKN-EKIADALHFFHDLREQG-KTKKRLYQV 677
Query: 197 LINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNG 256
+I GLC+ + +A EM+ +G PS+ Y I +C + EA+ L+ E +K+G
Sbjct: 678 MIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSG 737
Query: 257 IEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLI 303
F + L+ K +A M + P M + G LI
Sbjct: 738 RRITAFIGNVLLHNAMKSKGVYEAWT--RMRNIEDKIPEMKSLGELI 782
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 106/267 (39%), Gaps = 9/267 (3%)
Query: 173 DSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSL 232
D ALQ F M RG DS+ Y L+N L +F+++ +GF VT++ L
Sbjct: 199 DIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVRGFV-CAVTHSIL 257
Query: 233 IHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHN 292
+ C+ L EA L + N L+D LC +A +LL+ +
Sbjct: 258 VKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGT 317
Query: 293 RPNMVTYGTLINGLCKEGKFSEAVEILDRMR-LQGLKPNAGLYGKIISGFCAASSYQDAA 351
Y I L K G + + L ++ L+G + Y ++ ++
Sbjct: 318 VNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVY 377
Query: 352 NFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTF 411
+ + EM++ G+SP++ T N + C A +LY S G + ++
Sbjct: 378 DILTEMMVRGVSPNKKTM-------NAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSY 430
Query: 412 DCLIKCFCKRGDLNKAARILEEMISDG 438
+ LI C + +A +L+ I G
Sbjct: 431 NYLIHTLCANESVEQAYDVLKGAIDRG 457
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 112/250 (44%), Gaps = 5/250 (2%)
Query: 46 FRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAI 105
+ H + + I A + + A + + M ++ T + + + Y + + DA+
Sbjct: 599 WEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADAL 658
Query: 106 RVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKAL 165
FH + + Q K ++ Y +I L + N + A+ F EM+ G+ PS+ + I+ L
Sbjct: 659 HFFHDLRE-QGKTKKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKL 717
Query: 166 CKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPS 225
C N+E D A+ + +E G + ++ L++ + V EA +E+K P
Sbjct: 718 C-NEEKYDEAVGLVNEFRKSGRRITAFIGNVLLHNAMKSKGVYEAWTRMRNIEDK--IPE 774
Query: 226 VVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLE 285
+ + LI ++ ++ L+E+ + +++TY+ L+ + + A E++E
Sbjct: 775 MKSLGELIGLFSGRIDMEVELKRLDEVIEKCYPLDMYTYNMLLRMIVM-NQAEDAYEMVE 833
Query: 286 MMVTKHNRPN 295
+ + PN
Sbjct: 834 RIARRGYVPN 843
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 177/429 (41%), Gaps = 43/429 (10%)
Query: 5 TLFKWPKQITSSLVE-QLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAA 63
T F +QI SS V LIK K + + SNG + + VM
Sbjct: 792 TAFNLAEQIDSSYVHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKG 851
Query: 64 NQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIR---------------VF 108
N + E +L M ++N + + R + L AI +
Sbjct: 852 NNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVII 911
Query: 109 HKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKN 168
+ M F + F K++L V +L+E M+ G+ P + N L+ +
Sbjct: 912 YNMLIFYM-FRAKNHLEVNKVLLE-------------MQGRGVLPDETTFNFLVHGY-SS 956
Query: 169 KETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFS-PSVV 227
S+L+ M ++G +P++ + + + LC G V +A +L+ ME KG++ S V
Sbjct: 957 SADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSV 1016
Query: 228 TYTSLIHGMCQSDNLGEAIRLLEEMKKNGI-EPNVFTYSTLMDGLCKGGHSLQAMELLEM 286
T ++ + + +A L + +NG+ PN Y ++ L G+ A+ LL
Sbjct: 1017 VQTKIVETLISKGEIPKAEDFLTRVTRNGMMAPN---YDNIIKKLSDRGNLDIAVHLLNT 1073
Query: 287 MVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASS 346
M+ + P +Y ++INGL + + +A++ M GL P+ + ++ FC A
Sbjct: 1074 MLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQ 1133
Query: 347 YQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISI 406
++ I MV G SPS+ M TV+ ++ +A ++ M+ G +
Sbjct: 1134 VLESERLIKSMVGLGESPSQ-------EMFKTVIDRFRVEKNTVKASEMMEMMQKCGYEV 1186
Query: 407 EIDTFDCLI 415
+ +T LI
Sbjct: 1187 DFETHWSLI 1195
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 98/478 (20%), Positives = 190/478 (39%), Gaps = 55/478 (11%)
Query: 6 LFKWPKQ-----ITSS---LVEQLIKAEKDINKAVLMFDSATAEYSNGFRH-DHTTFGVM 56
LF W ++ +TS L++QL++ + + + D E H + + G +
Sbjct: 205 LFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLD--WVETRAELNHMNIDSIGKV 262
Query: 57 ISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQL 116
I L + + A L ++ C++ I I GY D + ++
Sbjct: 263 IELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIG-----EV 317
Query: 117 KFTQKSYL--TVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDS 174
K+ ++ ++ L +RA + E+ +G V+ ILI C + I
Sbjct: 318 KYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGD-IKR 376
Query: 175 ALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIH 234
A+ E+ ++G +PD Y+Y +++GL R G + +EM+E G S+ T+ ++
Sbjct: 377 AVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVT 436
Query: 235 GMCQSDNLGEAIRLLEEMKKNGI-------------------EP----------NVFTYS 265
G C++ EA R++ +M G+ +P + F+ +
Sbjct: 437 GYCKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDNDSTFSKA 496
Query: 266 TLMDGLCKGGHSLQAMELLEMMVTK-HNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRL 324
D L G + ++ E V +R + + +LI ++G A+ +LD M
Sbjct: 497 EFFDDLGNGLYLHTDLDAYEQRVNMVLDRSVLPEFNSLIVRASEDGDLQTALRLLDEMAR 556
Query: 325 QGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLC 384
G K + + ++ CA+ ++ + + E + + L N +VQ C
Sbjct: 557 WGQKLSRRSFAVLMRSLCASRAHLRVSISLLE------KWPKLAYQLDGETLNFLVQEYC 610
Query: 385 SNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPD 442
S + ++ M I+ T+ LI+CFCK+ LN + +D +PD
Sbjct: 611 KKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQNDNWLPD 668
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 152/336 (45%), Gaps = 15/336 (4%)
Query: 34 MFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQE-NCVVTEDILLTIC 92
+F A+ +Y GF+H +M S L+ + E LL M++ + +V E I +
Sbjct: 132 IFRWASVQY-QGFKHLPQACEIMASMLIREGMVKEVELLLMEMERHGDTMVNEGIFCDLI 190
Query: 93 RGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYR------EM 146
Y A+ +F M L Y +ID LV V R + YR E
Sbjct: 191 GKYVDDFDSRKAVMLFDWMRRKGLVPLTSCYQILIDQLV---RVHRTESAYRICLDWVET 247
Query: 147 RKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGS 206
R ++ S+ +I+ LC +++ + A + ++ GC +S Y + G
Sbjct: 248 RAELNHMNIDSIGKVIELLCLDQK-VQEARVLARKLVALGCILNSSIYSKITIG---YNE 303
Query: 207 VSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYST 266
+ ++L + + E + P V ++H +C+ A +EE++ G + + T+
Sbjct: 304 KQDFEDLLSFIGEVKYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGI 363
Query: 267 LMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQG 326
L+ C G +A+ L +++K +P++ +Y +++GL ++G + ILD M+ G
Sbjct: 364 LIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENG 423
Query: 327 LKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGI 362
+ + + +++G+C A +++A +++M G+
Sbjct: 424 MMLSLSTFKIMVTGYCKARQFEEAKRIVNKMFGYGL 459
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 147/333 (44%), Gaps = 32/333 (9%)
Query: 130 LVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQP 189
L E+ ++ ++ F E+++ GI NI ++AL + Q F +P + C+
Sbjct: 100 LKPEDVLELSLGFESELQRGGIG------NIKVQALWEIFRWASVQYQGFKHLP-QACE- 151
Query: 190 DSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVT---YTSLIHGMCQSDNLGEAI 246
+ + L R G V E + L EME G ++V + LI + +A+
Sbjct: 152 ------IMASMLIREGMVKEVELLLMEMERHG--DTMVNEGIFCDLIGKYVDDFDSRKAV 203
Query: 247 RLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMEL-LEMMVTKH--NRPNMVTYGTLI 303
L + M++ G+ P Y L+D L + + A + L+ + T+ N N+ + G +I
Sbjct: 204 MLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIGKVI 263
Query: 304 NGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGIS 363
LC + K EA + ++ G N+ +Y KI G+ ++D +FI E+
Sbjct: 264 ELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGEV------ 317
Query: 364 PSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGD 423
+ V + N ++ LC S RA+ + G + TF LI C GD
Sbjct: 318 ----KYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGD 373
Query: 424 LNKAARILEEMISDGCVPDKGIWDVVMGGLWDR 456
+ +A L E++S G PD ++ ++ GL+ +
Sbjct: 374 IKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRK 406
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 151/369 (40%), Gaps = 49/369 (13%)
Query: 120 QKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIF 179
Q+ Y +I L E A A EM PS+ S +LI LC+ + +A +
Sbjct: 739 QEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKA-GTAFNLA 797
Query: 180 HEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQS 239
++ + SY + LI GL G + +A+ M G S Y + G C+
Sbjct: 798 EQIDS------SYVHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKG 851
Query: 240 DNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPN-MVT 298
+N + +L M + I +V +Y + +C SL A+ L E ++ + P ++
Sbjct: 852 NNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVII 911
Query: 299 YGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMV 358
Y LI + + E ++L M+ +G+ P+ + ++ G+ +++ Y + ++ M+
Sbjct: 912 YNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMI 971
Query: 359 LGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISI------------ 406
G+ P+ R V LC N D +A L+ M ++G ++
Sbjct: 972 SKGMKPNN-------RSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVET 1024
Query: 407 -----EID-----------------TFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKG 444
EI +D +IK RG+L+ A +L M+ + +P
Sbjct: 1025 LISKGEIPKAEDFLTRVTRNGMMAPNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSS 1084
Query: 445 IWDVVMGGL 453
+D V+ GL
Sbjct: 1085 SYDSVINGL 1093
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 173/408 (42%), Gaps = 24/408 (5%)
Query: 55 VMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDF 114
++I RL AN+ +A L E++ + + + +G + LDA M
Sbjct: 779 MLIPRLCRANKAGTAFNLAEQID------SSYVHYALIKGLSLAGKMLDAENQLRIMLSN 832
Query: 115 QLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDS 174
L K Y + + N+ + M + I SV S ++ +C +++ S
Sbjct: 833 GLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSL-S 891
Query: 175 ALQIFHEMPNRGCQPDSYT-YGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLI 233
A+ + + P Y LI + R + E ++ EM+ +G P T+ L+
Sbjct: 892 AISLKEFLLLGESNPGGVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLV 951
Query: 234 HGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTK-HN 292
HG S + ++R L M G++PN + + LC G +A++L ++M +K N
Sbjct: 952 HGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWN 1011
Query: 293 RPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGL-KPNAGLYGKIISGFCAASSYQDAA 351
+ V ++ L +G+ +A + L R+ G+ PN Y II + A
Sbjct: 1012 LGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAPN---YDNIIKKLSDRGNLDIAV 1068
Query: 352 NFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTF 411
+ ++ M+ P ++ +++V+ GL +A + M G+S I T+
Sbjct: 1069 HLLNTMLKNQSIPGSSS-------YDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTW 1121
Query: 412 DCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKV 459
L+ FC+ + ++ R+++ M+ G P + ++ V+ DR +V
Sbjct: 1122 SGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVI----DRFRV 1165
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 102/194 (52%), Gaps = 5/194 (2%)
Query: 126 VIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR 185
+++ L+ + + +A F + + G+ + + +IK L ++ +D A+ + + M
Sbjct: 1021 IVETLISKGEIPKAEDFLTRVTRNGMMAP--NYDNIIKKL-SDRGNLDIAVHLLNTMLKN 1077
Query: 186 GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEA 245
P S +Y ++INGL R + +A + EM E G SPS+ T++ L+H C++ + E+
Sbjct: 1078 QSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLES 1137
Query: 246 IRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING 305
RL++ M G P+ + T++D ++++A E++EMM + T+ +LI+
Sbjct: 1138 ERLIKSMVGLGESPSQEMFKTVIDRFRVEKNTVKASEMMEMMQKCGYEVDFETHWSLISN 1197
Query: 306 L--CKEGKFSEAVE 317
+ KE K + A E
Sbjct: 1198 MSSSKEKKTTTAGE 1211
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 88/439 (20%), Positives = 167/439 (38%), Gaps = 43/439 (9%)
Query: 44 NGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLD 103
NG +TF +M++ A QF A+ ++ +M + + + + V
Sbjct: 422 NGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPL 481
Query: 104 AIRV-------FHKMEDFQ-----------LKFTQKSYLTVIDILV------------EE 133
A+R+ F K E F L ++ V+D V E+
Sbjct: 482 AVRLKRDNDSTFSKAEFFDDLGNGLYLHTDLDAYEQRVNMVLDRSVLPEFNSLIVRASED 541
Query: 134 NHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYT 193
++ A+ EM + G S S +L+++LC ++ + ++ + + P Q D T
Sbjct: 542 GDLQTALRLLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGET 601
Query: 194 YGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMK 253
L+ C+ G +K +F++M + VTYTSLI C+ + L + + + +
Sbjct: 602 LNFLVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQ 661
Query: 254 KNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFS 313
+ P++ L + L + G + ++L E + + + L G
Sbjct: 662 NDNWLPDLNDCGDLWNCLVRKGLVEEVVQLFERVFISYPLSQSEACRIFVEKLTVLGFSC 721
Query: 314 EAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHV 373
A ++ R+ +G +Y +I G C A +DEM+ PS + +
Sbjct: 722 IAHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLM-- 779
Query: 374 RMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEE 433
++ LC + AF L + + + LIK G + A L
Sbjct: 780 -----LIPRLCRANKAGTAFNLAEQIDSSYVHY------ALIKGLSLAGKMLDAENQLRI 828
Query: 434 MISDGCVPDKGIWDVVMGG 452
M+S+G I++V+ G
Sbjct: 829 MLSNGLSSYNKIYNVMFQG 847
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 118/286 (41%), Gaps = 12/286 (4%)
Query: 175 ALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIH 234
A + + GC + Y LI GLC S A + +EM +K PS+ + LI
Sbjct: 723 AHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIP 782
Query: 235 GMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRP 294
+C+++ G A L E++ + + + L+ GL G L A L +M++
Sbjct: 783 RLCRANKAGTAFNLAEQIDSS------YVHYALIKGLSLAGKMLDAENQLRIMLSNGLSS 836
Query: 295 NMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFI 354
Y + G CK + + E+L M + + + Y + + C A +
Sbjct: 837 YNKIYNVMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLK 896
Query: 355 DEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCL 414
+ ++LG +P V ++N ++ + + ++ L M+ RG+ + TF+ L
Sbjct: 897 EFLLLGESNPG------GVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFL 950
Query: 415 IKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKVR 460
+ + D + + R L MIS G P+ V L D V+
Sbjct: 951 VHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVK 996
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 127/298 (42%), Gaps = 11/298 (3%)
Query: 54 GVMISRLVAANQFRSAEGL-----LERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVF 108
GV+I ++ FR+ L L M+ + E + GY ++R
Sbjct: 908 GVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYL 967
Query: 109 HKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMG--IPPSVVSLNILIKALC 166
M +K +S V L + VK+A+ ++ M G + SVV I+ +
Sbjct: 968 SAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLIS 1027
Query: 167 KNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSV 226
K + I A + G +Y +I L G++ A L N M + P
Sbjct: 1028 KGE--IPKAEDFLTRVTRNGMMAPNYD--NIIKKLSDRGNLDIAVHLLNTMLKNQSIPGS 1083
Query: 227 VTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEM 286
+Y S+I+G+ + + L +A+ EM + G+ P++ T+S L+ C+ L++ L++
Sbjct: 1084 SSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKS 1143
Query: 287 MVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAA 344
MV P+ + T+I+ E +A E+++ M+ G + + + +IS ++
Sbjct: 1144 MVGLGESPSQEMFKTVIDRFRVEKNTVKASEMMEMMQKCGYEVDFETHWSLISNMSSS 1201
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 158/408 (38%), Gaps = 60/408 (14%)
Query: 46 FRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAI 105
FRHD +++ A + E+M Q + V T+ GY + RP DA+
Sbjct: 91 FRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVT----WTTLISGYSQHDRPCDAL 146
Query: 106 RVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKAL 165
F++M F + + +VI E + K G +V + L+ L
Sbjct: 147 LFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLD-L 205
Query: 166 CKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPS 225
+D A +F + +R + ++ LI G R +A ELF M GF PS
Sbjct: 206 YTRYGLMDDAQLVFDALESR----NDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPS 261
Query: 226 VVTYTSLIHGMCQSDNLGEAIRLLEE-MKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
+Y SL G C S E + + M K+G + F +TL+D K G A ++
Sbjct: 262 HFSYASLF-GACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIF 320
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAA 344
+ + + ++V++ +L+ + G EAV + MR G++PN + +++ C+
Sbjct: 321 DRLAKR----DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTA-CSH 375
Query: 345 SSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGI 404
S +DE + Y M+ GI
Sbjct: 376 S------GLLDE-----------------------------------GWHYYELMKKDGI 394
Query: 405 SIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGG 452
E + ++ + GDLN+A R +EEM + P IW ++
Sbjct: 395 VPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIE---PTAAIWKALLNA 439
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 124/303 (40%), Gaps = 21/303 (6%)
Query: 94 GYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPP 153
G+ R A+ +F M + + SY ++ +++ + M K G
Sbjct: 236 GHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKL 295
Query: 154 SVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKEL 213
+ N L+ K+ +I A +IF + R D ++ +L+ + G EA
Sbjct: 296 VAFAGNTLLDMYAKSG-SIHDARKIFDRLAKR----DVVSWNSLLTAYAQHGFGKEAVWW 350
Query: 214 FNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCK 273
F EM G P+ +++ S++ S L E E MKK+GI P + Y T++D L +
Sbjct: 351 FEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGR 410
Query: 274 GGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSE----AVEILDRMRLQGLKP 329
G +A+ +E M + P + L+N C+ K +E A E + + P
Sbjct: 411 AGDLNRALRFIEEMPIE---PTAAIWKALLNA-CRMHKNTELGAYAAEHVFELDPDDPGP 466
Query: 330 NAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRA-TWSLHVRMHNTVVQGLCSNVD 388
+ LY SG + DAA +M G+ A +W V + N + + ++
Sbjct: 467 HVILYNIYASG----GRWNDAARVRKKMKESGVKKEPACSW---VEIENAIHMFVANDER 519
Query: 389 SPR 391
P+
Sbjct: 520 HPQ 522
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 160/352 (45%), Gaps = 47/352 (13%)
Query: 95 YGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPS 154
Y + LDA +VF +M K + +I + + ++ F+REM K G+
Sbjct: 61 YVECGKVLDARKVFDEMP----KRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLD 116
Query: 155 VVSLNILIKALCKNKETIDSAL-QIFHEMPNR-GCQPDSYTYGTLINGLCRMGSVSEAKE 212
+ L+KA ++ +D ++ H + + + D++ +LI+ + G V A++
Sbjct: 117 AFIVPSLLKA---SRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARK 173
Query: 213 LFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLC 272
+F+++ E+ +V + ++I G + EA+ L+++MK GI+P+V T++ L+ G
Sbjct: 174 VFSDLGEQ----DLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFS 229
Query: 273 KGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAG 332
+ + E+LE+M +P++V++ ++I+GL + +A + +M GL PN+
Sbjct: 230 HMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSA 289
Query: 333 L---------------YGKIISGFCAASSYQDAA-------------NFIDE-MVLGGIS 363
+GK I G+ + +D FI E M+L +
Sbjct: 290 TIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKT 349
Query: 364 PSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLI 415
P + T + + + GL + +A +L+ M G ++ TF ++
Sbjct: 350 PKKTTVTFNSMIFCYANHGL-----ADKAVELFDQMEATGEKLDHLTFTAIL 396
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 130/303 (42%), Gaps = 15/303 (4%)
Query: 42 YSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENC---VVTEDILLTICRGYGRV 98
+S+ D F MIS +Q A L++ MK V+T + L++ G+ +
Sbjct: 175 FSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALIS---GFSHM 231
Query: 99 HRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSL 158
+ M K S+ ++I LV ++A +++M G+ P+ ++
Sbjct: 232 RNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATI 291
Query: 159 NILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEME 218
L+ A C + +I G + + L++ + G +SEA LF +
Sbjct: 292 ITLLPA-CTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTP 350
Query: 219 EKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSL 278
+K + VT+ S+I +A+ L ++M+ G + + T++ ++ G +
Sbjct: 351 KK----TTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTD 406
Query: 279 QAMELLEMMVTKHN-RPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKI 337
L +M K+ P + Y +++ L + GK EA E++ MR++ P+ ++G +
Sbjct: 407 LGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRME---PDLFVWGAL 463
Query: 338 ISG 340
++
Sbjct: 464 LAA 466
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 24/177 (13%)
Query: 301 TLINGLCKEGKFSEAVEILDRMRLQGLKPNAGL---------------YGKIISGFCAAS 345
+I + G + E+++ M GLK +A + +GK+I
Sbjct: 87 VMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKF 146
Query: 346 SYQDAANFIDEMV-----LGGISPSRATWS----LHVRMHNTVVQGLCSNVDSPRAFQLY 396
SY+ A + ++ G + +R +S + + N ++ G +N + A L
Sbjct: 147 SYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLV 206
Query: 397 LSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
M+ GI ++ T++ LI F + K + ILE M DG PD W ++ GL
Sbjct: 207 KDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGL 263
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 65/113 (57%)
Query: 214 FNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCK 273
N M+E G PSV+ YT+LI G S L +A + EM G PNVFTY++++ GLC
Sbjct: 712 LNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCM 771
Query: 274 GGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQG 326
G +A LL+ M ++ PN V Y TL+ L K GK SEA +++ M +G
Sbjct: 772 AGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 70/125 (56%)
Query: 174 SALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLI 233
+AL + M G P Y TLI+G G + +AKE+F EM KG P+V TY S+I
Sbjct: 707 AALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMI 766
Query: 234 HGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNR 293
G+C + EA LL+EM+ G PN YSTL+ L K G +A ++++ MV K +
Sbjct: 767 RGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKGHY 826
Query: 294 PNMVT 298
++V+
Sbjct: 827 VHLVS 831
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 61/117 (52%)
Query: 245 AIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLIN 304
A+ L MK+ GI+P+V Y+TL+DG G +A E+ M K PN+ TY ++I
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 305 GLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGG 361
GLC G+F EA +L M +G PN +Y ++ A +A I EMV G
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 71/133 (53%), Gaps = 1/133 (0%)
Query: 96 GRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSV 155
G+ ++PL A+ + M++ + + Y T+ID V + +A +REM G P+V
Sbjct: 700 GKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNV 759
Query: 156 VSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFN 215
+ N +I+ LC E A + EM +RGC P+ Y TL+ L + G +SEA+++
Sbjct: 760 FTYNSMIRGLCMAGE-FREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIK 818
Query: 216 EMEEKGFSPSVVT 228
EM +KG +V+
Sbjct: 819 EMVKKGHYVHLVS 831
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%)
Query: 273 KGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAG 332
KG L A+ L M P+++ Y TLI+G G+ +A E+ M ++G PN
Sbjct: 701 KGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVF 760
Query: 333 LYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWS 370
Y +I G C A +++A + EM G +P+ +S
Sbjct: 761 TYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYS 798
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 308 KEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRA 367
K K A+ L+ M+ G+ P+ Y +I G+ + A EM + G P+
Sbjct: 701 KGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVF 760
Query: 368 TWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKA 427
T+ N++++GLC + A L M +RG + + L+ K G L++A
Sbjct: 761 TY-------NSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEA 813
Query: 428 ARILEEMISDG 438
++++EM+ G
Sbjct: 814 RKVIKEMVKKG 824
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 180/407 (44%), Gaps = 50/407 (12%)
Query: 49 DHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVF 108
D ++ VMI V A L E M + + V + + +L+ GY + DA VF
Sbjct: 125 DLVSWNVMIKGYVRNRNLGKARELFEIMPERD-VCSWNTMLS---GYAQNGCVDDARSVF 180
Query: 109 HKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKN 168
+M + S+ ++ V+ + ++ A ++ + VS N L+ K
Sbjct: 181 DRMPEK----NDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCLLGGFVKK 232
Query: 169 KETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP--SV 226
K+ ++ A Q F M R D ++ T+I G + G + EA++LF+E SP V
Sbjct: 233 KKIVE-ARQFFDSMNVR----DVVSWNTIITGYAQSGKIDEARQLFDE------SPVQDV 281
Query: 227 VTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEM 286
T+T+++ G Q+ + EA L ++M E N +++ ++ G +G A EL ++
Sbjct: 282 FTWTAMVSGYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDV 337
Query: 287 MVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASS 346
M + N+ T+ T+I G + GK SEA + D+M K + + +I+G+ +
Sbjct: 338 MPCR----NVSTWNTMITGYAQCGKISEAKNLFDKMP----KRDPVSWAAMIAGYSQSGH 389
Query: 347 YQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPR-AFQLYLSMRTRGIS 405
+A +M G +R+++S + C++V + QL+ + G
Sbjct: 390 SFEALRLFVQMEREGGRLNRSSFSSAL--------STCADVVALELGKQLHGRLVKGGYE 441
Query: 406 IEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGG 452
+ L+ +CK G + +A + +EM V W+ ++ G
Sbjct: 442 TGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVS----WNTMIAG 484
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 156/367 (42%), Gaps = 38/367 (10%)
Query: 90 TICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKM 149
TI GY + + +D R Q FT + ++ ++ V+ A + +M +
Sbjct: 255 TIITGYAQSGK-IDEARQLFDESPVQDVFT---WTAMVSGYIQNRMVEEARELFDKMPER 310
Query: 150 GIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSE 209
+ VS N ++ + E ++ A ++F MP R T+ T+I G + G +SE
Sbjct: 311 ----NEVSWNAMLAGYVQG-ERMEMAKELFDVMPCRNVS----TWNTMITGYAQCGKISE 361
Query: 210 AKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMD 269
AK LF++M ++ V++ ++I G QS + EA+RL +M++ G N ++S+ +
Sbjct: 362 AKNLFDKMPKR----DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALS 417
Query: 270 GLCKGGHSLQAMELLEMMVTKHNRPNMVTYG-TLINGLCKEGKFSEAVEILDRMRLQGLK 328
C +L+ + L + K G L+ CK G EA ++ M + +
Sbjct: 418 -TCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIV 476
Query: 329 PNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSN-- 386
+ +I+G+ + A F + M G+ P AT V CS+
Sbjct: 477 S----WNTMIAGYSRHGFGEVALRFFESMKREGLKPDDAT--------MVAVLSACSHTG 524
Query: 387 -VDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGI 445
VD R + Y + G+ + C++ + G L A +++ M + PD I
Sbjct: 525 LVDKGRQY-FYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFE---PDAAI 580
Query: 446 WDVVMGG 452
W ++G
Sbjct: 581 WGTLLGA 587
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 131/316 (41%), Gaps = 81/316 (25%)
Query: 173 DSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSL 232
+ AL++F MP + S +Y +I+G R G A++LF+EM E+ +V++ +
Sbjct: 81 NEALRVFKRMP----RWSSVSYNGMISGYLRNGEFELARKLFDEMPER----DLVSWNVM 132
Query: 233 IHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHN 292
I G ++ NLG+A L E M E +V +++T++ G + G A + + M K++
Sbjct: 133 IKGYVRNRNLGKARELFEIMP----ERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKND 188
Query: 293 -------------------------RPN--MVTYGTLINGLCKEGKFSEAVEILDRMRLQ 325
R N +V++ L+ G K+ K EA + D M ++
Sbjct: 189 VSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVR 248
Query: 326 GLKPNAGLYGKIISGFCAASSYQDAANFIDE-----------MVLGGIS----------- 363
+ + II+G+ + +A DE MV G I
Sbjct: 249 DVVS----WNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELF 304
Query: 364 ---PSR--ATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCF 418
P R +W N ++ G A +L+ M R +S T++ +I +
Sbjct: 305 DKMPERNEVSW-------NAMLAGYVQGERMEMAKELFDVMPCRNVS----TWNTMITGY 353
Query: 419 CKRGDLNKAARILEEM 434
+ G +++A + ++M
Sbjct: 354 AQCGKISEAKNLFDKM 369
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 144/310 (46%), Gaps = 28/310 (9%)
Query: 148 KMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSV 207
+ G+ + +LN LI+ IDSALQ+F E P R D TY LI+GL + +
Sbjct: 145 RFGLLSDLFTLNTLIRVYSL-IAPIDSALQLFDENPQR----DVVTYNVLIDGLVKAREI 199
Query: 208 SEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTL 267
A+ELF+ M + +V++ SLI G Q ++ EAI+L +EM G++P+ +
Sbjct: 200 VRARELFDSMPLR----DLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVST 255
Query: 268 MDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGL 327
+ + G + + + K + L++ K G A+EI + + L
Sbjct: 256 LSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTL 315
Query: 328 KPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSN- 386
+ +I+G + + ++ +MV GI P T+ +V+ G CS+
Sbjct: 316 FT----WNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFI-------SVLVG-CSHS 363
Query: 387 --VDSPRAFQLYLSMRT-RGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDK 443
VD R L+ MR+ ++ E+ + C+ + G + +AA ++E+M DG +K
Sbjct: 364 GLVDEAR--NLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREK 421
Query: 444 GI-WDVVMGG 452
+ W ++GG
Sbjct: 422 LLAWSGLLGG 431
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 115/249 (46%), Gaps = 2/249 (0%)
Query: 129 ILVEENHVKRAIAFYREMR-KMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGC 187
+L E+ ++ F+ M+ ++ PSVV I+++ L I A + F EM GC
Sbjct: 161 VLKEQRGWRQVRDFFSWMKLQLSYRPSVVVYTIVLR-LYGQVGKIKMAEETFLEMLEVGC 219
Query: 188 QPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIR 247
+PD+ GT++ R G S + ++E+ S Y ++ + + G+ I
Sbjct: 220 EPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVID 279
Query: 248 LLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLC 307
L EM + G+ PN FTY+ ++ K G +A++ M + P VTY ++I+
Sbjct: 280 LWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSV 339
Query: 308 KEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRA 367
K G + +A+ + + MR QG+ P+ ++S + +Y A + +M I
Sbjct: 340 KAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEV 399
Query: 368 TWSLHVRMH 376
L +R++
Sbjct: 400 IRGLIIRIY 408
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 142/328 (43%), Gaps = 9/328 (2%)
Query: 56 MISRLVAANQFRSAEGLLERMKQENC---VVTEDILLTICRGYGRVHRPLDAIRVFHKME 112
MI V A GL ++ C VT IL+ G+ HR +A +
Sbjct: 710 MIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGK-HR--EAEHISRTCL 766
Query: 113 DFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETI 172
+ ++ Y T+I ++E ++ A Y M G+P S+ + N +I + + +
Sbjct: 767 EKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQ-L 825
Query: 173 DSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSL 232
D A++IF G D Y +I + G +SEA LF+EM++KG P +Y +
Sbjct: 826 DKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMM 885
Query: 233 IHGMCQSDNL-GEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKH 291
+ +C + L E LL+ M++NG ++ TY TL+ + +A + + ++ K
Sbjct: 886 VK-ICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKG 944
Query: 292 NRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAA 351
+ + +L++ L K G EA +M G+ P++ I+ G+ +
Sbjct: 945 IPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGI 1004
Query: 352 NFIDEMVLGGISPSRATWSLHVRMHNTV 379
F ++M+ + R S+ ++ V
Sbjct: 1005 LFYEKMIRSSVEDDRFVSSVVEDLYKAV 1032
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 166/396 (41%), Gaps = 13/396 (3%)
Query: 56 MISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQ 115
+IS V AE + + + + + E+ + T+ YGR H+ +A R++ + +
Sbjct: 641 VISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLY--LAAGE 698
Query: 116 LKFTQKSYL-TVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDS 174
K KS + ++ID V ++ A + E + G P V+++IL+ AL N+
Sbjct: 699 SKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALT-NRGKHRE 757
Query: 175 ALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIH 234
A I + + D+ Y TLI + G + A E++ M G S+ TY ++I
Sbjct: 758 AEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMIS 817
Query: 235 GMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRP 294
+ L +AI + +++G+ + Y+ ++ KGG +A+ L M K +P
Sbjct: 818 VYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKP 877
Query: 295 NMVTYGTLINGLCKEGKFSEAV-EILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANF 353
+Y ++ +C + V E+L M G + Y +I + +S + +A
Sbjct: 878 GTPSYNMMVK-ICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKT 936
Query: 354 IDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDC 413
I + GI S + + V G+ + + Y M GIS +
Sbjct: 937 ITLVKEKGIPLSHSH--FSSLLSALVKAGMMEEAE-----RTYCKMSEAGISPDSACKRT 989
Query: 414 LIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVV 449
++K + GD K E+MI D+ + VV
Sbjct: 990 ILKGYMTCGDAEKGILFYEKMIRSSVEDDRFVSSVV 1025
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 142/331 (42%), Gaps = 30/331 (9%)
Query: 140 IAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLIN 199
+ FY+ +++ I S N ++ +L K K + ++ EM G P+ +TY +++
Sbjct: 243 LTFYKAVQERRILLSTSVYNFMLSSLQK-KSFHGKVIDLWLEMVEEGVPPNEFTYTLVVS 301
Query: 200 GLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEP 259
+ G EA + F EM+ GF P VTY+S+I ++ + +AI L E+M+ GI P
Sbjct: 302 SYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVP 361
Query: 260 NVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEIL 319
+ +T +T++ K + +A+ L M + V G +I K G F +A +
Sbjct: 362 SNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMF 421
Query: 320 DRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTV 379
+ L + Y + + + A + I+ M I SR + + ++ + +
Sbjct: 422 EETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKI 481
Query: 380 VQGLCSNVDSPRAF-------------------QLYLSMRTRG---------ISIEIDTF 411
C+ ++ RA +L L + +G + +I+ +
Sbjct: 482 QNVDCAE-EAFRALSKTGLPDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELY 540
Query: 412 DCLIKCFCKRGDLNKAARILEEMISDGCVPD 442
++ +CK G + +A ++ +M + V D
Sbjct: 541 KTAMRVYCKEGMVAEAQDLIVKMGREARVKD 571
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 98/455 (21%), Positives = 183/455 (40%), Gaps = 28/455 (6%)
Query: 10 PKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSA 69
P+++T S V L D KA+ +++ S G + T M+S + A
Sbjct: 326 PEEVTYSSVISLSVKAGDWEKAIGLYEDMR---SQGIVPSNYTCATMLSLYYKTENYPKA 382
Query: 70 EGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDI 129
L M++ E I I R YG++ DA +F + E L +K+YL + +
Sbjct: 383 LSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQV 442
Query: 130 LVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQP 189
+ +V +A+ M+ IP S + ++++ K + +D A + F + G P
Sbjct: 443 HLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAK-IQNVDCAEEAFRALSKTGL-P 500
Query: 190 DSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLL 249
D+ + ++N R+ +AK ++ + Y + + C+ + EA L+
Sbjct: 501 DASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLI 560
Query: 250 EEMKKNG-IEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCK 308
+M + ++ N F + L + H + + E V ++ +++ G ++N K
Sbjct: 561 VKMGREARVKDNRFVQT-----LAESMHIVNKHDKHE-AVLNVSQLDVMALGLMLNLRLK 614
Query: 309 EGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRAT 368
EG +E IL+ M L +A ++IS F A D ++ G+ T
Sbjct: 615 EGNLNETKAILNLMFKTDLGSSA--VNRVISSFVREGDVSKAEMIADIIIRLGLRMEEET 672
Query: 369 WSLHVRMHNTVVQGLCSNVDSPRAFQLYLSM---RTRGISIEIDTFDCLIKCFCKRGDLN 425
+ T++ A +LYL+ +T G S+ D ++C G L
Sbjct: 673 IA-------TLIAVYGRQHKLKEAKRLYLAAGESKTPGKSVIRSMIDAYVRC----GWLE 721
Query: 426 KAARILEEMISDGCVPDKGIWDVVMGGLWDRKKVR 460
A + E GC P +++ L +R K R
Sbjct: 722 DAYGLFMESAEKGCDPGAVTISILVNALTNRGKHR 756
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 103/240 (42%), Gaps = 1/240 (0%)
Query: 49 DHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVF 108
D + +I ++ A + + A + ERM + T+ YGR + AI +F
Sbjct: 773 DTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIF 832
Query: 109 HKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKN 168
L +K Y +I + + A++ + EM+K GI P S N+++K +C
Sbjct: 833 SNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK-ICAT 891
Query: 169 KETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVT 228
++ M G D TY TLI +EA++ ++EKG S
Sbjct: 892 SRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSH 951
Query: 229 YTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMV 288
++SL+ + ++ + EA R +M + GI P+ T++ G G + + + E M+
Sbjct: 952 FSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMI 1011
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/333 (18%), Positives = 138/333 (41%), Gaps = 3/333 (0%)
Query: 56 MISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMED-F 114
+I L Q A L + M E CVV ++ + Y R R A + +M+
Sbjct: 156 LIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSH 215
Query: 115 QLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDS 174
+ +Y +I ++ + +MR+ GI P+ ++ N LI A K K ++
Sbjct: 216 NCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEM 275
Query: 175 ALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIH 234
+ + C+PDS+T + + G + + + + + G P++ T+ L+
Sbjct: 276 ESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLD 335
Query: 235 GMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRP 294
+S N + ++E M+K + TY+ ++D + G Q L +M ++ P
Sbjct: 336 SYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFP 395
Query: 295 NMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFI 354
+ VT +L+ + K + +L + ++ + + ++ + + + +
Sbjct: 396 SCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVL 455
Query: 355 DEMVLGGISPSRATWSLHVRMHNTVVQGLCSNV 387
+ M G P + T+ V+ + + G+ ++V
Sbjct: 456 ELMEKKGFKPDKITYRTMVKAYR--ISGMTTHV 486
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 7/218 (3%)
Query: 218 EEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHS 277
E+ + P+V Y LI + + +A L +EM G N Y+ L+ + G
Sbjct: 142 EQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRF 201
Query: 278 LQAMELLEMMVTKHN-RPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGK 336
A LLE M + HN +P++ TY LI + F + ++L MR QG++PN Y
Sbjct: 202 DAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNT 261
Query: 337 IISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLY 396
+I + A + + + + +M LG +W++ N+ ++ N Y
Sbjct: 262 LIDAYGKAKMFVEMESTLIQM-LGEDDCKPDSWTM-----NSTLRAFGGNGQIEMMENCY 315
Query: 397 LSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEM 434
++ GI I TF+ L+ + K G+ K + ++E M
Sbjct: 316 EKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYM 353
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 139/319 (43%), Gaps = 17/319 (5%)
Query: 127 IDILVEENHVKRAIAFYREMRKMGIPPSVV-SLNILIKALCKNKETIDSALQIFHEMPNR 185
I I++ K I + +K+ +P +V+ SL+ I AL +SA+Q+F + +
Sbjct: 90 ISIILRREATKSIIEKKKGSKKL-LPRTVLESLHERITAL-----RWESAIQVFELLREQ 143
Query: 186 -GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGE 244
+P+ Y LI L + +A ELF EM +G + YT+L+ +S
Sbjct: 144 LWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDA 203
Query: 245 AIRLLEEMK-KNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLI 303
A LLE MK + +P+V TYS L+ + + +LL M + RPN +TY TLI
Sbjct: 204 AFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLI 263
Query: 304 NGLCKEGKFSEAVEILDRMRLQ-GLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGI 362
+ K F E L +M + KP++ + F + N ++ GI
Sbjct: 264 DAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGI 323
Query: 363 SPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRG 422
P+ T+++ + + G N A Y M+ S I T++ +I F + G
Sbjct: 324 EPNIRTFNILLDSY-----GKSGNYKKMSAVMEY--MQKYHYSWTIVTYNVVIDAFGRAG 376
Query: 423 DLNKAARILEEMISDGCVP 441
DL + + M S+ P
Sbjct: 377 DLKQMEYLFRLMQSERIFP 395
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 140/343 (40%), Gaps = 11/343 (3%)
Query: 104 AIRVFHKM-EDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
AI+VF + E K Y+ +I +L + ++A ++EM G + L+
Sbjct: 133 AIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALV 192
Query: 163 KALCKNKETIDSALQIFHEM-PNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKG 221
A ++ D+A + M + CQPD +TY LI ++ + + ++L ++M +G
Sbjct: 193 SAYSRSGR-FDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQG 251
Query: 222 FSPSVVTYTSLIHGMCQSDNLGE-AIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQA 280
P+ +TY +LI ++ E L++ + ++ +P+ +T ++ + G
Sbjct: 252 IRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMM 311
Query: 281 MELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISG 340
E + PN+ T+ L++ K G + + +++ M+ Y +I
Sbjct: 312 ENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDA 371
Query: 341 FCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMR 400
F A + M I PS T VR + G S D ++
Sbjct: 372 FGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAY-----GRASKADKIGGVLRFIE-- 424
Query: 401 TRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDK 443
I +++ F+CL+ + + + +LE M G PDK
Sbjct: 425 NSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDK 467
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 138/311 (44%), Gaps = 19/311 (6%)
Query: 33 LMFDSATAEY--SNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLT 90
+ ++ A E+ N R D +++ A A +M N V+ ++
Sbjct: 228 MRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMV-- 285
Query: 91 ICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMG 150
GY + R DA +F + E L + T+I VE ++ + A+ + EM G
Sbjct: 286 --SGYSKCGRLDDAQVIFDQTEKKDLV----CWTTMISAYVESDYPQEALRVFEEMCCSG 339
Query: 151 IPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEA 210
I P VVS+ +I A C N +D A + + G + + LIN + G +
Sbjct: 340 IKPDVVSMFSVISA-CANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDAT 398
Query: 211 KELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDG 270
+++F +M + +VV+++S+I+ + +A+ L MK+ +EPN T+ ++ G
Sbjct: 399 RDVFEKMPRR----NVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYG 454
Query: 271 LCKGGHSLQAMELLEMMVTKHN-RPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKP 329
G + ++ M ++N P + YG +++ + EA+E+++ M +
Sbjct: 455 CSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVAS--- 511
Query: 330 NAGLYGKIISG 340
N ++G ++S
Sbjct: 512 NVVIWGSLMSA 522
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 140/351 (39%), Gaps = 38/351 (10%)
Query: 93 RGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIP 152
R R P I + ++ + Q S+L ++ V + A + M G+
Sbjct: 84 RDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPIL------KAVSKVSALFEGMELHGVA 137
Query: 153 --------PSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRM 204
P V + + + A C I+ A +F EM +R D T+ T+I CR
Sbjct: 138 FKIATLCDPFVETGFMDMYASCGR---INYARNVFDEMSHR----DVVTWNTMIERYCRF 190
Query: 205 GSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTY 264
G V EA +LF EM++ P + +++ ++ N+ + E + +N + +
Sbjct: 191 GLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLL 250
Query: 265 STLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRL 324
+ L+ G A E M + N+ +++G K G+ +A I D
Sbjct: 251 TALVTMYAGAGCMDMAREFFRKMSVR----NLFVSTAMVSGYSKCGRLDDAQVIFD---- 302
Query: 325 QGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLC 384
Q K + + +IS + + Q+A +EM GI P V M + + C
Sbjct: 303 QTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDV------VSMFSVI--SAC 354
Query: 385 SNVDS-PRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEM 434
+N+ +A ++ + G+ E+ + LI + K G L+ + E+M
Sbjct: 355 ANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKM 405
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 6/156 (3%)
Query: 177 QIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGM 236
+IFH+M G ++ + + L + G EA ELF+++++K P VV +T+++
Sbjct: 186 EIFHKMRTEGFTNEAVK---MFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAY 242
Query: 237 CQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGG--HSLQAMELLEMMVTKHNRP 294
+ E +++ M +G+ PN +TYS L+ GL G H LLEMM + P
Sbjct: 243 ANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMS-P 301
Query: 295 NMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPN 330
N TY + +EGK A E+L M+ +G P+
Sbjct: 302 NAATYTAVFEAFVREGKEESARELLQEMKGKGFVPD 337
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 5/154 (3%)
Query: 143 YREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLC 202
+ +MR G V + AL K+ T + AL++F ++ ++ PD + ++
Sbjct: 188 FHKMRTEGFTNEAVKM---FDALSKDGRTHE-ALELFSQIKDKNRMPDVVAHTAIVEAYA 243
Query: 203 RMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNL-GEAIRLLEEMKKNGIEPNV 261
G E ++F M G SP+ TY+ LI G+ +A + L EM NG+ PN
Sbjct: 244 NAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNA 303
Query: 262 FTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPN 295
TY+ + + + G A ELL+ M K P+
Sbjct: 304 ATYTAVFEAFVREGKEESARELLQEMKGKGFVPD 337
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
Query: 96 GRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSV 155
GR H +A+ +F +++D ++ +++ K + + M G+ P+
Sbjct: 211 GRTH---EALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSPNA 267
Query: 156 VSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFN 215
+ ++LIK L + +T A + EM G P++ TY + R G A+EL
Sbjct: 268 YTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESARELLQ 327
Query: 216 EMEEKGFSP 224
EM+ KGF P
Sbjct: 328 EMKGKGFVP 336
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 70/143 (48%), Gaps = 8/143 (5%)
Query: 302 LINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGG 361
+ + L K+G+ EA+E+ +++ + P+ + I+ + A ++ M+ G
Sbjct: 203 MFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASG 262
Query: 362 ISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLY-LSMRTRGISIEIDTFDCLIKCFCK 420
+SP+ T+S+ +++GL ++ + + + Y L M G+S T+ + + F +
Sbjct: 263 VSPNAYTYSV-------LIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVR 315
Query: 421 RGDLNKAARILEEMISDGCVPDK 443
G A +L+EM G VPD+
Sbjct: 316 EGKEESARELLQEMKGKGFVPDE 338
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 139/292 (47%), Gaps = 32/292 (10%)
Query: 42 YSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRP 101
Y GF ++ +I R ++ A LL+++ Q + ++ Y +
Sbjct: 38 YRRGFSNEEA----LILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGY- 92
Query: 102 LDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNIL 161
LD RV ++ + T + LT V+ + A +REM P +VVS ++
Sbjct: 93 LDEARVLFEVMPERNIVTCNAMLTG---YVKCRRMNEAWTLFREM-----PKNVVSWTVM 144
Query: 162 IKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKG 221
+ ALC + + D A+++F EMP R + ++ TL+ GL R G + +AK++F+ M
Sbjct: 145 LTALCDDGRSED-AVELFDEMPER----NVVSWNTLVTGLIRNGDMEKAKQVFDAMP--- 196
Query: 222 FSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAM 281
S VV++ ++I G ++D + EA L +M E NV T+++++ G C+ G +A
Sbjct: 197 -SRDVVSWNAMIKGYIENDGMEEAKLLFGDMS----EKNVVTWTSMVYGYCRYGDVREAY 251
Query: 282 ELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMR--LQGLKPNA 331
L M + N+V++ +I+G + EA+ + M+ + + PN
Sbjct: 252 RLFCEMPER----NIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNG 299
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 108/231 (46%), Gaps = 30/231 (12%)
Query: 175 ALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIH 234
A + ++P RG + +L++ + G + EA+ LF M E+ ++VT +++
Sbjct: 61 ARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPER----NIVTCNAMLT 116
Query: 235 GMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRP 294
G + + EA L EM K NV +++ ++ LC G S A+EL + M +
Sbjct: 117 GYVKCRRMNEAWTLFREMPK-----NVVSWTVMLTALCDDGRSEDAVELFDEMPER---- 167
Query: 295 NMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFI 354
N+V++ TL+ GL + G +A ++ D M + + + +I G+ ++A
Sbjct: 168 NVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVS----WNAMIKGYIENDGMEEA---- 219
Query: 355 DEMVLGGISPSR-ATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGI 404
+++ G +S TW+ ++V G C D A++L+ M R I
Sbjct: 220 -KLLFGDMSEKNVVTWT-------SMVYGYCRYGDVREAYRLFCEMPERNI 262
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 41/256 (16%)
Query: 205 GSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTY 264
G + A+ L +++ ++G VV +TSL+ ++ L EA L E M E N+ T
Sbjct: 56 GGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMP----ERNIVTC 111
Query: 265 STLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRL 324
+ ++ G K +A L M N+V++ ++ LC +G+ +AVE+ D M
Sbjct: 112 NAMLTGYVKCRRMNEAWTLFREM-----PKNVVSWTVMLTALCDDGRSEDAVELFDEMP- 165
Query: 325 QGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSR--ATWSLHVRMHNTVVQG 382
+ N + +++G + A D M PSR +W N +++G
Sbjct: 166 ---ERNVVSWNTLVTGLIRNGDMEKAKQVFDAM------PSRDVVSW-------NAMIKG 209
Query: 383 LCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPD 442
N A L+ M + + T+ ++ +C+ GD+ +A R+ EM P+
Sbjct: 210 YIENDGMEEAKLLFGDMSEKNVV----TWTSMVYGYCRYGDVREAYRLFCEM------PE 259
Query: 443 KGI--WDVVMGGL-WD 455
+ I W ++ G W+
Sbjct: 260 RNIVSWTAMISGFAWN 275
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 145/328 (44%), Gaps = 54/328 (16%)
Query: 154 SVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKEL 213
++V+ N ++ K + ++ A +F EMP + ++ ++ LC G +A EL
Sbjct: 107 NIVTCNAMLTGYVKCRR-MNEAWTLFREMPK-----NVVSWTVMLTALCDDGRSEDAVEL 160
Query: 214 FNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCK 273
F+EM E+ +VV++ +L+ G+ ++ ++ +A ++ + M +V +++ ++ G +
Sbjct: 161 FDEMPER----NVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKGYIE 212
Query: 274 GGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGL 333
ME +++ + N+VT+ +++ G C+ G EA + M + N
Sbjct: 213 N----DGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMP----ERNIVS 264
Query: 334 YGKIISGFCAASSYQDAANFIDEMV--LGGISPSRATW---------------SLHVRMH 376
+ +ISGF Y++A EM + +SP+ T L ++H
Sbjct: 265 WTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLH 324
Query: 377 NTVVQGLCSNVD-----SPRAFQLYLS--MRTRGISIEIDTFD-----CLIKCFCKRGDL 424
V+ VD + +Y S + S+ ++FD +I + K GDL
Sbjct: 325 AQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDL 384
Query: 425 NKAARILEEMISDGCVPDKGIWDVVMGG 452
+A + E + S + DK W ++ G
Sbjct: 385 ERAETLFERVKS---LHDKVSWTSMIDG 409
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 125/289 (43%), Gaps = 21/289 (7%)
Query: 48 HDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPL--DAI 105
HD ++ MI + A A GL +++ ++ V T ++++ G V L +A
Sbjct: 398 HDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGV-TWTVMIS-----GLVQNELFAEAA 451
Query: 106 RVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMG--IPPSVVSLNILIK 163
+ M LK +Y ++ +++ + + + K P ++ N L+
Sbjct: 452 SLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVS 511
Query: 164 ALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFS 223
K I+ A +IF +M Q D+ ++ ++I GL G +A LF EM + G
Sbjct: 512 MYAKCG-AIEDAYEIFAKM----VQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKK 566
Query: 224 PSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKN-GIEPNVFTYSTLMDGLCKGGHSLQAME 282
P+ VT+ ++ S + + L + MK+ I+P + Y +++D L + G +A E
Sbjct: 567 PNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEE 626
Query: 283 LLEMMVTKHNRPNMVTYGTLIN--GLCKEGKFSEAVEILDRMRLQGLKP 329
+ + P+ YG L+ GL K +E + MRL L P
Sbjct: 627 FISALPFT---PDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDP 672
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 96/452 (21%), Positives = 195/452 (43%), Gaps = 57/452 (12%)
Query: 1 MGSRTLFKWPKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRL 60
M R + W ++LV LI+ D+ KA +FD+ + D ++ MI
Sbjct: 164 MPERNVVSW-----NTLVTGLIR-NGDMEKAKQVFDAMPS-------RDVVSWNAMIKGY 210
Query: 61 VAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQ 120
+ + A+ L M ++N V ++ CR YG V +A R+F +M + +
Sbjct: 211 IENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCR-YGDVR---EAYRLFCEMPERNIV--- 263
Query: 121 KSYLTVIDILVEENHVKRAIAFYREMRKM--GIPP---SVVSLNILIKALCKNKETIDSA 175
S+ +I + A+ + EM+K + P +++SL L +
Sbjct: 264 -SWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGE- 321
Query: 176 LQIFHEMPNRGCQP---DSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSL 232
Q+ ++ + G + D +L++ G ++ A+ L NE S + + +
Sbjct: 322 -QLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE------SFDLQSCNII 374
Query: 233 IHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHN 292
I+ ++ +L A L E +K + ++++++DG + G +A L + + H+
Sbjct: 375 INRYLKNGDLERAETLFERVKS---LHDKVSWTSMIDGYLEAGDVSRAFGLFQKL---HD 428
Query: 293 RPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAAN 352
+ VT+ +I+GL + F+EA +L M GLKP Y ++S A+S D
Sbjct: 429 KDG-VTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSS-AGATSNLDQGK 486
Query: 353 FIDEMVLGGISPSRATWSLHVRMHNTVVQ--GLCSNVDSPRAFQLYLSMRTRGISIEIDT 410
I + I+ + A + + + N++V C ++ A++++ M + + +
Sbjct: 487 HIHCV----IAKTTACYDPDLILQNSLVSMYAKCGAIED--AYEIFAKM----VQKDTVS 536
Query: 411 FDCLIKCFCKRGDLNKAARILEEMISDGCVPD 442
++ +I G +KA + +EM+ G P+
Sbjct: 537 WNSMIMGLSHHGLADKALNLFKEMLDSGKKPN 568
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 105/455 (23%), Positives = 185/455 (40%), Gaps = 61/455 (13%)
Query: 35 FDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRG 94
F A +S+ D ++ +MIS LV A ++R A M + E + +
Sbjct: 175 FKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGA 234
Query: 95 -------YGR-VHR-------PLDAI---------RVFHKMED----FQLKFTQKSYL-- 124
+G+ +H PL+ + F KMED Q +L
Sbjct: 235 SSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWT 294
Query: 125 TVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPN 184
+V+ V K A+ + EMR +G+ P+ + + ++ +LC ++D QI +
Sbjct: 295 SVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAIL-SLCSAVRSLDFGKQIHSQTIK 353
Query: 185 RGCQPDSYTYGTLINGLCRMGSVSE--AKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNL 242
G + DS G + + S SE A +F M SP+VV++T+LI G+ +
Sbjct: 354 VGFE-DSTDVGNALVDMYMKCSASEVEASRVFGAM----VSPNVVSWTTLILGLVDHGFV 408
Query: 243 GEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTL 302
+ LL EM K +EPNV T S ++ K H + +E+ ++ +H MV +L
Sbjct: 409 QDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSL 468
Query: 303 INGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGI 362
++ K A ++ M+ + + Y +++ F ++ A + I+ M GI
Sbjct: 469 VDAYASSRKVDYAWNVIRSMK----RRDNITYTSLVTRFNELGKHEMALSVINYMYGDGI 524
Query: 363 SPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQ----LYLSMRTRGISIEIDTFDCLIKCF 418
RM + G S + A + L+ G S + L+ +
Sbjct: 525 -----------RMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMY 573
Query: 419 CKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGL 453
K G L A ++ EE+ + PD W+ ++ GL
Sbjct: 574 SKCGSLEDAKKVFEEIAT----PDVVSWNGLVSGL 604
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 143/349 (40%), Gaps = 69/349 (19%)
Query: 154 SVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYT---------------YGTLI 198
+V + ++I A K++E SAL +F EM G P+ +T YG +
Sbjct: 88 TVFAWTVMISAFTKSQE-FASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRV 146
Query: 199 NG--------------------LCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQ 238
+G + G EA ELF+ ++ + +++T +I +
Sbjct: 147 HGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQ----NADTISWTMMISSLVG 202
Query: 239 SDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEM----MVTKHNRP 294
+ EA++ EM K G+ PN FT+ L+ G S +E + ++ +
Sbjct: 203 ARKWREALQFYSEMVKAGVPPNEFTFVKLL-----GASSFLGLEFGKTIHSNIIVRGIPL 257
Query: 295 NMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFI 354
N+V +L++ + K +AV +L+ Q + L+ ++SGF ++A
Sbjct: 258 NVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQ----DVFLWTSVVSGFVRNLRAKEAVGTF 313
Query: 355 DEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDS-PRAFQLYLSMRTRGISIEIDTFDC 413
EM G+ P+ T+S + LCS V S Q++ G D +
Sbjct: 314 LEMRSLGLQPNNFTYS--------AILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNA 365
Query: 414 LIKCF--CKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRKKVR 460
L+ + C ++ +A+R+ M+S P+ W ++ GL D V+
Sbjct: 366 LVDMYMKCSASEV-EASRVFGAMVS----PNVVSWTTLILGLVDHGFVQ 409
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 22/245 (8%)
Query: 210 AKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMD 269
A++LF+EM + +V +T +I +S A+ L EEM +G PN FT+S+++
Sbjct: 77 ARKLFDEMSHR----TVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVR 132
Query: 270 GLCKGGHSLQAMELLEMMVTKHN-RPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLK 328
C G + + V K N V +L + K G+F EA E+ ++
Sbjct: 133 S-CAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQ----N 187
Query: 329 PNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVD 388
+ + +IS A +++A F EMV G+ P+ T+ + G S +
Sbjct: 188 ADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTF--------VKLLGASSFLG 239
Query: 389 SPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDV 448
++ ++ RGI + + L+ + + + A R+L S G D +W
Sbjct: 240 LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLN---SSG-EQDVFLWTS 295
Query: 449 VMGGL 453
V+ G
Sbjct: 296 VVSGF 300
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 90/179 (50%), Gaps = 12/179 (6%)
Query: 196 TLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKN 255
+L++ + GS+ +AK++F E+ +P VV++ L+ G+ + + A+ EEM+
Sbjct: 568 SLVDMYSKCGSLEDAKKVFEEIA----TPDVVSWNGLVSGLASNGFISSALSAFEEMRMK 623
Query: 256 GIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHN-RPNMVTYGTLINGLCKEGKFSE 314
EP+ T+ L+ G + +E ++M +N P + Y L+ L + G+ E
Sbjct: 624 ETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEE 683
Query: 315 AVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHV 373
A +++ M LKPNA ++ ++ A Y+ + ++M G++ + + +L++
Sbjct: 684 ATGVVETMH---LKPNAMIFKTLLR----ACRYRGNLSLGEDMANKGLALAPSDPALYI 735
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 11/168 (6%)
Query: 148 KMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSV 207
K G + LN L+ K +++ A ++F E+ PD ++ L++GL G +
Sbjct: 556 KSGFSGAASVLNSLVDMYSKCG-SLEDAKKVFEEIAT----PDVVSWNGLVSGLASNGFI 610
Query: 208 SEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGE-AIRLLEEMKK-NGIEPNVFTYS 265
S A F EM K P VT+ L+ C + L + + + MKK IEP V Y
Sbjct: 611 SSALSAFEEMRMKETEPDSVTFLILLSA-CSNGRLTDLGLEYFQVMKKIYNIEPQVEHYV 669
Query: 266 TLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFS 313
L+ L + G +A ++E M H +PN + + TL+ G S
Sbjct: 670 HLVGILGRAGRLEEATGVVETM---HLKPNAMIFKTLLRACRYRGNLS 714
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 137/288 (47%), Gaps = 23/288 (7%)
Query: 56 MISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQ 115
+IS L Q A + ++++ N + ++ R + + +P A VF +M+ F
Sbjct: 57 LISALSLCRQTNLAVRVFNQVQEPNVHLCNSLI----RAHAQNSQPYQAFFVFSEMQRFG 112
Query: 116 LKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCK-NKETIDS 174
L +Y ++ ++ + + + K+G+ + N LI + +
Sbjct: 113 LFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRD 172
Query: 175 ALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIH 234
A+++F +M R D+ ++ +++ GL + G + +A+ LF+EM ++ ++++ +++
Sbjct: 173 AMKLFEKMSER----DTVSWNSMLGGLVKAGELRDARRLFDEMPQR----DLISWNTMLD 224
Query: 235 GMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRP 294
G + + +A L E+M E N ++ST++ G K G ME+ +M K P
Sbjct: 225 GYARCREMSKAFELFEKMP----ERNTVSWSTMVMGYSKAGD----MEMARVMFDKMPLP 276
Query: 295 --NMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISG 340
N+VT+ +I G ++G EA ++D+M GLK +A I++
Sbjct: 277 AKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAA 324
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 158/352 (44%), Gaps = 24/352 (6%)
Query: 51 TTFGVMISRLVAANQFRSAEGLLERMK-QENCVVTEDILLTICRGYGRVHRPLDAIRVFH 109
++ M+ A A + ++M VVT I++ GY +A R+
Sbjct: 248 VSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIA---GYAEKGLLKEADRLVD 304
Query: 110 KMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIK--ALCK 167
+M LKF + ++++ E + + + +++ + + LN L+ A C
Sbjct: 305 QMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCG 364
Query: 168 NKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVV 227
N + A +F+++P + D ++ T+++GL G EA ELF+ M +G P V
Sbjct: 365 N---LKKAFDVFNDIPKK----DLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKV 417
Query: 228 TYTSLIHGMCQSDNLGEAIRLLEEMKK-NGIEPNVFTYSTLMDGLCKGGHSLQAMELLEM 286
T+ +++ + + E I M+K + P V Y L+D L + G +A+++++
Sbjct: 418 TFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQT 477
Query: 287 MVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKP-NAGLYGKIISGFCAAS 345
M + PN+V +G L+ + A E+LD L L P + G Y + + + AA
Sbjct: 478 MPME---PNVVIWGALLGACRMHNEVDIAKEVLD--NLVKLDPCDPGNYSLLSNIYAAAE 532
Query: 346 SYQDAANFIDEMVLGGIS-PSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLY 396
++ A+ +M G+ PS A+ V + + + + + P++ Q+Y
Sbjct: 533 DWEGVADIRSKMKSMGVEKPSGAS---SVELEDGIHEFTVFDKSHPKSDQIY 581
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/385 (20%), Positives = 165/385 (42%), Gaps = 98/385 (25%)
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
DA+++F KM + S+ +++ LV+ ++ A + EM + + +S N ++
Sbjct: 172 DAMKLFEKMSERD----TVSWNSMLGGLVKAGELRDARRLFDEMPQRDL----ISWNTML 223
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF 222
+ +E + A ++F +MP R ++ ++ T++ G + G + A+ +F++M
Sbjct: 224 DGYARCRE-MSKAFELFEKMPER----NTVSWSTMVMGYSKAGDMEMARVMFDKMPLP-- 276
Query: 223 SPSVVTYTSLIHGMCQSDNLGEAIRLLEEM------------------------------ 252
+ +VVT+T +I G + L EA RL+++M
Sbjct: 277 AKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMR 336
Query: 253 -----KKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLC 307
K++ + N + + L+D K G+ +A ++ + K ++V++ T+++GL
Sbjct: 337 IHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK----DLVSWNTMLHGLG 392
Query: 308 KEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRA 367
G EA+E+ RMR +G++P+ + I+ C+ + A IDE GI
Sbjct: 393 VHGHGKEAIELFSRMRREGIRPDKVTF---IAVLCSCNH----AGLIDE----GID---- 437
Query: 368 TWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKA 427
Y + + +++ + CL+ + G L +A
Sbjct: 438 --------------------------YFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEA 471
Query: 428 ARILEEMISDGCVPDKGIWDVVMGG 452
++++ M + P+ IW ++G
Sbjct: 472 IKVVQTMPME---PNVVIWGALLGA 493
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/421 (19%), Positives = 175/421 (41%), Gaps = 36/421 (8%)
Query: 44 NGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLD 103
N R ++F +I + R E L + + + ++I + Y + LD
Sbjct: 289 NYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLD 348
Query: 104 AIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIK 163
A+R+F ++ S+ +I ++ + + A+ + EM++ G+ P+ + ++++
Sbjct: 349 ALRLF---KEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT 405
Query: 164 ALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFS 223
AL + S ++ ++ + S L++ ++G V EA ++F+ +++K
Sbjct: 406 AL-----PVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDK--- 457
Query: 224 PSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSL-QAME 282
+V +++++ G Q+ AI++ E+ K GI+PN FT+S++++ S+ Q +
Sbjct: 458 -DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQ 516
Query: 283 LLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFC 342
+ ++ L+ K+G A E+ R R + L + +ISG+
Sbjct: 517 FHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVS----WNSMISGYA 572
Query: 343 AASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGL---CSNVDSPRAFQLYLSM 399
A + EM V+M G+ C++ + Y +
Sbjct: 573 QHGQAMKALDVFKEMK-----------KRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDI 621
Query: 400 RTRG--ISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLWDRK 457
R I+ + C++ + + G L KA +++E M + IW ++ K
Sbjct: 622 MVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPA---GSTIWRTILAACRVHK 678
Query: 458 K 458
K
Sbjct: 679 K 679
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 105/233 (45%), Gaps = 14/233 (6%)
Query: 139 AIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLI 198
A+ + MR + S S +IK LC N + + Q+ + G D L+
Sbjct: 279 ALGMFYSMRLNYVRLSESSFASVIK-LCANLKELRFTEQLHCSVVKYGFLFDQNIRTALM 337
Query: 199 NGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIE 258
+ ++ +A LF E+ G +VV++T++I G Q+D EA+ L EMK+ G+
Sbjct: 338 VAYSKCTAMLDALRLFKEI---GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVR 394
Query: 259 PNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGT-LINGLCKEGKFSEAVE 317
PN FTYS ++ L + + + V K N T GT L++ K GK EA +
Sbjct: 395 PNEFTYSVILTAL-----PVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAK 449
Query: 318 ILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWS 370
+ + + + + +++G+ + A E+ GGI P+ T+S
Sbjct: 450 VFSGIDDKDIVA----WSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFS 498
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 120/266 (45%), Gaps = 21/266 (7%)
Query: 190 DSYTYGT-LINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRL 248
D + GT L++ + + + +++F+EM+E+ +VVT+T+LI G ++ E + L
Sbjct: 126 DDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER----NVVTWTTLISGYARNSMNDEVLTL 181
Query: 249 LEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCK 308
M+ G +PN FT++ + L + G + +++ ++V + +LIN K
Sbjct: 182 FMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLK 241
Query: 309 EGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRAT 368
G +A + D+ ++ + + +ISG+ AAN +D LG R
Sbjct: 242 CGNVRKARILFDKTEVKSVVT----WNSMISGY--------AANGLDLEALGMFYSMRLN 289
Query: 369 WSLHVRMHNTVVQGLCSNVDSPR-AFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKA 427
+ V LC+N+ R QL+ S+ G + + L+ + K + A
Sbjct: 290 YVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDA 349
Query: 428 ARILEEMISDGCVPDKGIWDVVMGGL 453
R+ +E+ GCV + W ++ G
Sbjct: 350 LRLFKEI---GCVGNVVSWTAMISGF 372
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 153/371 (41%), Gaps = 78/371 (21%)
Query: 125 TVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPN 184
+++D ++ ++ K + EM++ +VV+ LI +N D L +F M N
Sbjct: 133 SLVDTYMKGSNFKDGRKVFDEMKER----NVVTWTTLISGYARNSMN-DEVLTLFMRMQN 187
Query: 185 RGCQPDSYTYG-----------------------------------TLINGLCRMGSVSE 209
G QP+S+T+ +LIN + G+V +
Sbjct: 188 EGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRK 247
Query: 210 AKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMD 269
A+ LF++ E K SVVT+ S+I G + EA+ + M+ N + + ++++++
Sbjct: 248 ARILFDKTEVK----SVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIK 303
Query: 270 GLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEG---KFSEAVEILDRMRL-- 324
LC L E+ T+ ++V YG L + + +S+ +LD +RL
Sbjct: 304 -LCAN--------LKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFK 354
Query: 325 -QGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGL 383
G N + +ISGF ++A + EM G+ P+ T+S+ ++ L
Sbjct: 355 EIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSV-------ILTAL 407
Query: 384 CSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDK 443
V SP + S + T L+ + K G + +AA++ + DK
Sbjct: 408 --PVISPSEVHAQVVKTNYERSSTVGT--ALLDAYVKLGKVEEAAKVF------SGIDDK 457
Query: 444 GI--WDVVMGG 452
I W ++ G
Sbjct: 458 DIVAWSAMLAG 468
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/312 (20%), Positives = 121/312 (38%), Gaps = 54/312 (17%)
Query: 174 SALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELF-------NEME-------- 218
+A +F + P R D +Y +L+ G R G EAK LF EM+
Sbjct: 45 NAHNLFDKSPGR----DRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVL 100
Query: 219 --------------------EKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIE 258
+ GF V TSL+ + N + ++ +EMK E
Sbjct: 101 KVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK----E 156
Query: 259 PNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEI 318
NV T++TL+ G + + + + L M + +PN T+ + L +EG +++
Sbjct: 157 RNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQV 216
Query: 319 LDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNT 378
+ GL + +I+ + + + A D+ + + TW N+
Sbjct: 217 HTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSV----VTW-------NS 265
Query: 379 VVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDG 438
++ G +N A ++ SMR + + +F +IK +L ++ ++ G
Sbjct: 266 MISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYG 325
Query: 439 CVPDKGIWDVVM 450
+ D+ I +M
Sbjct: 326 FLFDQNIRTALM 337
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 152/388 (39%), Gaps = 30/388 (7%)
Query: 17 LVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERM 76
L+ Q + + +A L F+ SN F H T + F+ G+LE +
Sbjct: 111 LILQTLNLSPEAGRAALGFNEWLDSNSN-FSHTDETVSFFVDYFGRRKDFK---GMLEII 166
Query: 77 KQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKME-DFQLKFTQKSYLTVIDILVEENH 135
+ + L + R RP F KME D+ LK ++S V+ L E+ H
Sbjct: 167 SKYKGIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGH 226
Query: 136 VKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYG 195
A + P + ++LI C E +D A ++ EM G + + Y
Sbjct: 227 ASIAEKMVKNTANEIFPDENI-CDLLISGWCI-AEKLDEATRLAGEMSRGGFEIGTKAYN 284
Query: 196 TLINGLCRMGS-------VSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRL 248
+++ +C++ E +++ EME +G + T+ LI+ +C+ EA+ L
Sbjct: 285 MMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTL 344
Query: 249 LEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING--- 305
M + G +P+ TY L+ L + + E+++ M + YG L+N
Sbjct: 345 FGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKS-------AGYGELLNKKEY 397
Query: 306 ------LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVL 359
LC + A+ + M+ G KP Y ++ CA + A E
Sbjct: 398 YGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAK 457
Query: 360 GGISPSRATWSLHVRMHNTVVQGLCSNV 387
GI+ S + + R + + SNV
Sbjct: 458 KGIAVSPKEYRVDPRFMKKKTKEVDSNV 485
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 112/270 (41%), Gaps = 16/270 (5%)
Query: 178 IFHEMPNR-GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGM 236
F +M N G + D + ++ LC G S A+++ + F P LI G
Sbjct: 197 FFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKNTANEIF-PDENICDLLISGW 255
Query: 237 CQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMEL--------LEMMV 288
C ++ L EA RL EM + G E Y+ ++D +CK +L LEM
Sbjct: 256 CIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEF 315
Query: 289 TKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQ 348
R N T+ LIN LCK + EA+ + RM G +P+A Y +I A+
Sbjct: 316 RGVPR-NTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIG 374
Query: 349 DAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEI 408
+ ID+M G L+ + + ++ LC A ++ SM+ G I
Sbjct: 375 EGDEMIDKMKSAGYGEL-----LNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGI 429
Query: 409 DTFDCLIKCFCKRGDLNKAARILEEMISDG 438
T+D L+ C L +A + +E G
Sbjct: 430 KTYDLLMGKMCANNQLTRANGLYKEAAKKG 459
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 10/202 (4%)
Query: 263 TYSTLMDGLCKGGHSLQAMELLEMMVTKHN-RPNMVTYGTLINGLCKEGKFSEAVEILDR 321
T + +D L + G Q + E M + + + + ++ LC++G S A E + +
Sbjct: 177 TLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIA-EKMVK 235
Query: 322 MRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQ 381
+ P+ + +ISG+C A +A EM GG +++ + V
Sbjct: 236 NTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMML----DCVC 291
Query: 382 GLCSNVD----SPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISD 437
LC D P ++ L M RG+ +TF+ LI CK +A + M
Sbjct: 292 KLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEW 351
Query: 438 GCVPDKGIWDVVMGGLWDRKKV 459
GC PD + V++ L+ ++
Sbjct: 352 GCQPDAETYLVLIRSLYQAARI 373
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 160/364 (43%), Gaps = 29/364 (7%)
Query: 90 TICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIA-FYREMRK 148
T+ YG P+DA RVF +M + + + V+ + + + A+ FY R
Sbjct: 203 TLAYLYGVNREPVDARRVFDEMPEPDV----ICWTAVLSAFSKNDLYEEALGLFYAMHRG 258
Query: 149 MGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVS 208
G+ P + ++ A C N + +I ++ G + +L++ + GSV
Sbjct: 259 KGLVPDGSTFGTVLTA-CGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVR 317
Query: 209 EAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLM 268
EA+++FN M +K + V++++L+ G CQ+ +AI + EM+ E +++ + T++
Sbjct: 318 EARQVFNGMSKK----NSVSWSALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVL 369
Query: 269 DGLCKGGHSLQ-AMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGL 327
C G +++ E+ V + N++ LI+ K G A + +M ++
Sbjct: 370 KA-CAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIR-- 426
Query: 328 KPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNV 387
N + ++S ++A +F ++MV GI P ++ + G V
Sbjct: 427 --NMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISF-----IAILTACGHTGMV 479
Query: 388 DSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWD 447
D R + L ++ GI + + C+I + G +A +LE C D +W
Sbjct: 480 DEGRNY-FVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERA---ECRNDASLWG 535
Query: 448 VVMG 451
V++G
Sbjct: 536 VLLG 539
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 129/301 (42%), Gaps = 19/301 (6%)
Query: 67 RSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTV 126
R A + M ++N V +L GY + AI +F +ME+ L + TV
Sbjct: 317 REARQVFNGMSKKNSVSWSALL----GGYCQNGEHEKAIEIFREMEEKDLY----CFGTV 368
Query: 127 IDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRG 186
+ V+ + + + G +V+ + LI K+ IDSA +++ +M R
Sbjct: 369 LKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSG-CIDSASRVYSKMSIR- 426
Query: 187 CQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAI 246
+ T+ +++ L + G EA FN+M +KG P +++ +++ + + E
Sbjct: 427 ---NMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGR 483
Query: 247 RLLEEMKKN-GIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING 305
M K+ GI+P YS ++D L + G +A LLE R + +G L+
Sbjct: 484 NYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLE---RAECRNDASLWGVLLGP 540
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISG-FCAASSYQDAANFIDEMVLGGISP 364
S E + + R+ L+P + ++S + A + DA N MV G++
Sbjct: 541 CAANADASRVAERIAK-RMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAK 599
Query: 365 S 365
+
Sbjct: 600 T 600
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 182/443 (41%), Gaps = 78/443 (17%)
Query: 56 MISRL---VAANQFRSAEG-LLERMKQENCVVTEDILLTICRGYGRVHRPLD--AIRVFH 109
+IS+L + NQ + G +L + ++C IL + R ++ P+D A RV
Sbjct: 52 LISKLDDCINLNQIKQIHGHVLRKGLDQSCY----ILTKLIRTLTKLGVPMDPYARRVIE 107
Query: 110 KMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNK 169
++ F+ F + VI E AIA Y MRK I P + + L+KA K
Sbjct: 108 PVQ-FRNPFL---WTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMK 163
Query: 170 ----------------------------------ETIDSALQIFHEMPNRGCQPDSYTYG 195
E+ID A ++F EMP R D ++
Sbjct: 164 DLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPER----DVISWT 219
Query: 196 TLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKN 255
LI R+G++ A ELF + K +V +T+++ G Q+ EA+ + M+K+
Sbjct: 220 ELIAAYARVGNMECAAELFESLPTK----DMVAWTAMVTGFAQNAKPQEALEYFDRMEKS 275
Query: 256 GIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRP--NMVTYGTLINGLCKEGKFS 313
GI + T + + + G S A +++ P ++V LI+ K G
Sbjct: 276 GIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVE 335
Query: 314 EAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGG-ISPSRATW--S 370
EAV + M N Y +I G Q+A + MV I P+ T+ +
Sbjct: 336 EAVNVFMSMN----NKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGA 391
Query: 371 LHVRMHNTVVQGLCSNVDSPRAFQLYLSM-RTRGISIEIDTFDCLIKCFCKRGDLNKAAR 429
L H+ GL VD R Q++ SM +T G+ D + C++ + G L +A
Sbjct: 392 LMACSHS----GL---VDQGR--QVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALE 442
Query: 430 ILEEMISDGCVPDKGIWDVVMGG 452
+++ M + P G+W ++G
Sbjct: 443 LIKTMSVE---PHGGVWGALLGA 462
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 108/234 (46%), Gaps = 23/234 (9%)
Query: 94 GYGRVHRPLDAIRVFHKMEDFQLK---FTQKSYLTVIDILVEENHVKRAIAFYREMRKMG 150
G+ + +P +A+ F +ME ++ T Y++ L + RA+ +K G
Sbjct: 255 GFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQI---AQKSG 311
Query: 151 IPPS----VVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGS 206
PS + S I + + C N ++ A+ +F M N+ + +TY ++I GL G
Sbjct: 312 YSPSDHVVIGSALIDMYSKCGN---VEEAVNVFMSMNNK----NVFTYSSMILGLATHGR 364
Query: 207 VSEAKELFNEM-EEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKN-GIEPNVFTY 264
EA LF+ M + P+ VT+ + S + + ++ + M + G++P Y
Sbjct: 365 AQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHY 424
Query: 265 STLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEI 318
+ ++D L + G +A+EL++ M + P+ +G L+ G C+ E EI
Sbjct: 425 TCMVDLLGRTGRLQEALELIKTMSVE---PHGGVWGALL-GACRIHNNPEIAEI 474
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 127/281 (45%), Gaps = 10/281 (3%)
Query: 175 ALQIFHEMPNRG-CQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLI 233
AL++F + + QP TY L+ L + G + A++LF+EM E+G P+V YT+L+
Sbjct: 107 ALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALL 166
Query: 234 HGMCQSDNLGEAIRLLEEMKK-NGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHN 292
+S+ + +A +L++MK +P+VFTYSTL+ L + M +
Sbjct: 167 AAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLI 226
Query: 293 RPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQ-GLKPNAGLYGKIISGFCAASSYQDAA 351
PN VT +++G + G+F + ++L M + KP+ I+S F
Sbjct: 227 TPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMME 286
Query: 352 NFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTF 411
++ ++ GI P T+++ + + G D + Y MR T+
Sbjct: 287 SWYEKFRNFGIEPETRTFNILIGSY-----GKKRMYDKMSSVMEY--MRKLEFPWTTSTY 339
Query: 412 DCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGG 452
+ +I+ F GD ++M S+G D + ++ G
Sbjct: 340 NNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLING 380
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/428 (19%), Positives = 173/428 (40%), Gaps = 52/428 (12%)
Query: 9 WPKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRS 68
W +T +L + + A+K +A+ +FD + ++ T+ ++ L + Q
Sbjct: 87 WVNTVTETLSDLI--AKKQWLQALEVFDMLREQ--TFYQPKEGTYMKLLVLLGKSGQPNR 142
Query: 69 AEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDF-QLKFTQKSYLTVI 127
A+ L + M +E T ++ + Y R + DA + KM+ F Q + +Y T++
Sbjct: 143 AQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLL 202
Query: 128 DILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEM-PNRG 186
V+ + + Y+EM + I P+ V+ NI++ + D ++ +M +
Sbjct: 203 KACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGR-FDQMEKVLSDMLVSTA 261
Query: 187 CQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAI 246
C+PD +T +++ MG + + + + G P T+ LI + +
Sbjct: 262 CKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMS 321
Query: 247 RLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMEL-LEMMVTKHNRPNMVTYGTLING 305
++E M+K TY+ +++ G + + MEL + M ++ + + T+ LING
Sbjct: 322 SVMEYMRKLEFPWTTSTYNNIIEAFADVGDA-KNMELTFDQMRSEGMKADTKTFCCLING 380
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPS 365
NAGL+ K+IS A+ ++ N
Sbjct: 381 YA----------------------NAGLFHKVISSVQLAAKFEIPEN------------- 405
Query: 366 RATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLN 425
+N V+ D ++Y+ M+ R + TF+ +++ + K G +N
Sbjct: 406 -------TAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKEG-MN 457
Query: 426 KAARILEE 433
LE+
Sbjct: 458 DKIYYLEQ 465
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 93/202 (46%), Gaps = 13/202 (6%)
Query: 253 KKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTK-HNRPNMVTYGTLINGLCKEGK 311
K NG V T + + L LQA+E+ +M+ + +P TY L+ L K G+
Sbjct: 83 KANGW---VNTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQ 139
Query: 312 FSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEM-VLGGISPSRATWS 370
+ A ++ D M +GL+P LY +++ + ++ DA + +D+M P T+S
Sbjct: 140 PNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYS 199
Query: 371 LHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARI 430
++ Q VDS LY M R I+ T + ++ + + G ++ ++
Sbjct: 200 TLLKACVDASQ--FDLVDS-----LYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKV 252
Query: 431 LEEM-ISDGCVPDKGIWDVVMG 451
L +M +S C PD ++++
Sbjct: 253 LSDMLVSTACKPDVWTMNIILS 274
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 147/320 (45%), Gaps = 16/320 (5%)
Query: 65 QFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYL 124
+ R + + +RM + + I+ + Y +PL AI +F +M +++ + +
Sbjct: 297 RLRDCQKVFDRMYVRDLISWNSII----KAYELNEQPLRAISLFQEMRLSRIQPDCLTLI 352
Query: 125 TVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPN 184
++ IL + ++ + + G +++ + + +DSA +F+ +PN
Sbjct: 353 SLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPN 412
Query: 185 RGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKG-FSPSVVTYTSLIHGMCQSDNLG 243
D ++ T+I+G + G SEA E++N MEE+G + + T+ S++ Q+ L
Sbjct: 413 ----TDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALR 468
Query: 244 EAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLI 303
+ ++L + KNG+ +VF ++L D K G A+ L + R N V + TLI
Sbjct: 469 QGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQI----PRVNSVPWNTLI 524
Query: 304 NGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLG--G 361
G +AV + M +G+KP+ + ++S C+ S D + EM+ G
Sbjct: 525 ACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSA-CSHSGLVDEGQWCFEMMQTDYG 583
Query: 362 ISPSRATWSLHVRMHNTVVQ 381
I+PS + V M+ Q
Sbjct: 584 ITPSLKHYGCMVDMYGRAGQ 603
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/387 (18%), Positives = 154/387 (39%), Gaps = 65/387 (16%)
Query: 94 GYGRVHRPLDAIRVFHKM-------EDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREM 146
GYGR + IR F D++ T S L +++ N + + M
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYR---TFPSVLKACRTVIDGNKIHCLALKFGFM 182
Query: 147 RKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGS 206
+ + S++ L KA + +A +F EMP R D ++ +I+G C+ G+
Sbjct: 183 WDVYVAASLIHLYSRYKA-------VGNARILFDEMPVR----DMGSWNAMISGYCQSGN 231
Query: 207 VSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYST 266
EA L N + + VT SL+ ++ + + + K+G+E +F +
Sbjct: 232 AKEALTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNK 287
Query: 267 LMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQG 326
L+D + G ++ + M + +++++ ++I + A+ + MRL
Sbjct: 288 LIDLYAEFGRLRDCQKVFDRMYVR----DLISWNSIIKAYELNEQPLRAISLFQEMRLSR 343
Query: 327 LKPN-------AGLYGKI--------ISGFCAASSYQDAANFIDEMVLGG---------- 361
++P+ A + ++ + GF + F++++ +G
Sbjct: 344 IQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGW-----FLEDITIGNAVVVMYAKLG 398
Query: 362 -ISPSRATWSL----HVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRG-ISIEIDTFDCLI 415
+ +RA ++ V NT++ G N + A ++Y M G I+ T+ ++
Sbjct: 399 LVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVL 458
Query: 416 KCFCKRGDLNKAARILEEMISDGCVPD 442
+ G L + ++ ++ +G D
Sbjct: 459 PACSQAGALRQGMKLHGRLLKNGLYLD 485
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 145/357 (40%), Gaps = 30/357 (8%)
Query: 27 DINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTED 86
DIN F A S R+ T +I L +R ++E +++++ +
Sbjct: 448 DINMPEWQFSKAIR--SAKIRYTDYTVMRLIHFLGKLGNWRRVLQVIEWLQRQDRYKSNK 505
Query: 87 ILL---TICRGYGRVHRPLDAIRVFHKMEDFQLKFTQK----SYLTVIDILVEENHVKRA 139
I + T G+ RP++A+ VFH M L+ + +Y ++ L + H+K
Sbjct: 506 IRIIYTTALNVLGKSRRPVEALNVFHAM---LLQISSYPDMVAYRSIAVTLGQAGHIKEL 562
Query: 140 IAFYREMRKMG---------------IPPSVVSLNILIKALCKNKETIDSALQIFHEMPN 184
MR + P VV N ++ A C ++ + A + ++
Sbjct: 563 FYVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNA-CVQRKQWEGAFWVLQQLKQ 621
Query: 185 RGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGE 244
RG +P TYG ++ + + E F +M++ P+ + Y L++ + + E
Sbjct: 622 RGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKMQKSSI-PNALAYRVLVNTLWKEGKSDE 680
Query: 245 AIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLIN 304
A+ +E+M+ GI + Y L LC G + + +L+ + N+P +VTY LI
Sbjct: 681 AVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMLKKICRVANKPLVVTYTGLIQ 740
Query: 305 GLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGG 361
G A I D+M+ + PN ++ + +++A +M G
Sbjct: 741 ACVDSGNIKNAAYIFDQMK-KVCSPNLVTCNIMLKAYLQGGLFEEARELFQKMSEDG 796
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 129/293 (44%), Gaps = 26/293 (8%)
Query: 162 IKALCKNKETIDSALQIFHEMPNR-GCQPDSYTYGTLINGLCRMGSVSEAKELFNEME-- 218
+ L K++ ++ AL +FH M + PD Y ++ L + G + E + + M
Sbjct: 514 LNVLGKSRRPVE-ALNVFHAMLLQISSYPDMVAYRSIAVTLGQAGHIKELFYVIDTMRSP 572
Query: 219 -EKGFSPS------------VVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYS 265
+K F P+ VV Y ++++ Q A +L+++K+ G +P+ TY
Sbjct: 573 PKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYG 632
Query: 266 TLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQ 325
+M+ + E M K + PN + Y L+N L KEGK EAV ++ M +
Sbjct: 633 LIMEVMLACEKYNLVHEFFRKM-QKSSIPNALAYRVLVNTLWKEGKSDEAVHTVEDMESR 691
Query: 326 GLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCS 385
G+ +A LY + C+A + N + ++ P T++ ++Q
Sbjct: 692 GIVGSAALYYDLARCLCSAGRCNEGLNMLKKICRVANKPLVVTYT-------GLIQACVD 744
Query: 386 NVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDG 438
+ + A ++ M+ + S + T + ++K + + G +A + ++M DG
Sbjct: 745 SGNIKNAAYIFDQMK-KVCSPNLVTCNIMLKAYLQGGLFEEARELFQKMSEDG 796
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 167/405 (41%), Gaps = 39/405 (9%)
Query: 7 FKWPKQITSSLVEQLIKAEKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQF 66
F +P I + L++ K ++ VL + + + N ++S +F
Sbjct: 287 FTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNS----------LVSLYYKCGKF 336
Query: 67 RSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTV 126
A + E+M ++ +V+ + LL+ GY +A +F +M++ + S++ +
Sbjct: 337 DEARAIFEKMPAKD-LVSWNALLS---GYVSSGHIGEAKLIFKEMKEKNIL----SWMIM 388
Query: 127 IDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRG 186
I L E + + + M++ G P + + IK+ C + Q ++ G
Sbjct: 389 ISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKS-CAVLGAYCNGQQYHAQLLKIG 447
Query: 187 CQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSV--VTYTSLIHGMCQSDNLGE 244
LI + G V EA+++F M P + V++ +LI + Q + E
Sbjct: 448 FDSSLSAGNALITMYAKCGVVEEARQVFRTM------PCLDSVSWNALIAALGQHGHGAE 501
Query: 245 AIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHN-RPNMVTYGTLI 303
A+ + EEM K GI P+ T T++ G Q + + M T + P Y LI
Sbjct: 502 AVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLI 561
Query: 304 NGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGIS 363
+ LC+ GKFS+A +++ + KP A ++ ++SG C + + + G I
Sbjct: 562 DLLCRSGKFSDAESVIESLP---FKPTAEIWEALLSG-CRVHGNMELGIIAADKLFGLIP 617
Query: 364 PSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEI 408
T+ L MH G V R MR RG+ E+
Sbjct: 618 EHDGTYMLLSNMH--AATGQWEEVARVRKL-----MRDRGVKKEV 655
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 147/363 (40%), Gaps = 78/363 (21%)
Query: 136 VKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYG 195
++ A A + + G P LN LI CK+ E ++ A Q+F E+ +PD
Sbjct: 30 LQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSE-LNYARQLFDEIS----EPDKIART 84
Query: 196 TLINGLCRMGSVSEAKELFNEMEEKGFSP----SVVTYTSLIHGMCQSDNLGEAIRLLEE 251
T+++G C G ++ A+ +F + +P V Y ++I G +++ AI L +
Sbjct: 85 TMVSGYCASGDITLARGVFEK------APVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 252 MKKNGIEPNVFTYSTLMDGL--------------------------------------CK 273
MK G +P+ FT+++++ GL C
Sbjct: 139 MKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCA 198
Query: 274 GGHSL--QAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNA 331
SL A ++ + ++ K R ++ T++ G K G F E+ L+G+ N
Sbjct: 199 SSPSLLHSARKVFDEILEKDER----SWTTMMTGYVKNGYFDLGEEL-----LEGMDDNM 249
Query: 332 GL--YGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDS 389
L Y +ISG+ YQ+A + MV GI T+ +R T GL
Sbjct: 250 KLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATA--GLLQLGKQ 307
Query: 390 PRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVV 449
A+ L R S D + L+ + K G ++A I E+M + V W+ +
Sbjct: 308 VHAYVL----RREDFSFHFD--NSLVSLYYKCGKFDEARAIFEKMPAKDLVS----WNAL 357
Query: 450 MGG 452
+ G
Sbjct: 358 LSG 360
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 132/304 (43%), Gaps = 29/304 (9%)
Query: 155 VVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELF 214
V N +I N + SA+ +F +M + G +PD++T+ +++ GL + + F
Sbjct: 113 TVMYNAMITGFSHNNDGY-SAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQF 171
Query: 215 NEMEEK---GFSPSVVTYTSLIHGMCQSDN--LGEAIRLLEEMKKNGIEPNVFTYSTLMD 269
+ K G+ SV ++ C S L A ++ +E+ +E + +++T+M
Sbjct: 172 HAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEI----LEKDERSWTTMMT 227
Query: 270 GLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKP 329
G K G+ ELLE M + +V Y +I+G G + EA+E++ RM G++
Sbjct: 228 GYVKNGYFDLGEELLEGM---DDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIEL 284
Query: 330 NAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDS 389
+ Y +I CA + + VL R +S H + C D
Sbjct: 285 DEFTYPSVIRA-CATAGLLQLGKQVHAYVL-----RREDFSFHFDNSLVSLYYKCGKFDE 338
Query: 390 PRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVV 449
RA ++ M + ++ +++ L+ + G + +A I +EM + W ++
Sbjct: 339 ARA--IFEKMPAK----DLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILS----WMIM 388
Query: 450 MGGL 453
+ GL
Sbjct: 389 ISGL 392
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 129/294 (43%), Gaps = 31/294 (10%)
Query: 155 VVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLIN-----GLCRMGSVSE 209
+V+ N +I N+ AL++ M + G + D +TY ++I GL ++G
Sbjct: 251 LVAYNAMISGYV-NRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVH 309
Query: 210 AKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMD 269
A L E F S+V SL + + D EA + E+M ++ +++ L+
Sbjct: 310 AYVLRREDFSFHFDNSLV---SLYYKCGKFD---EARAIFEKMPAK----DLVSWNALLS 359
Query: 270 GLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKP 329
G GH +A + + M K N++++ +I+GL + G E +++ M+ +G +P
Sbjct: 360 GYVSSGHIGEAKLIFKEMKEK----NILSWMIMISGLAENGFGEEGLKLFSCMKREGFEP 415
Query: 330 NAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDS 389
+ I +Y + + +++ G S + + + M+ C V+
Sbjct: 416 CDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAK-----CGVVEE 470
Query: 390 PRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDK 443
R Q++ +M ++ +++ LI + G +A + EEM+ G PD+
Sbjct: 471 AR--QVFRTMPC----LDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDR 518
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 171/410 (41%), Gaps = 55/410 (13%)
Query: 46 FRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAI 105
F +H GV++ RL AN+F A +L + +L + GR +P
Sbjct: 37 FNPNHEDGGVVVERLCRANRFGEAIDVL---------CGQKLLREAVQLLGRAKKP---- 83
Query: 106 RVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKAL 165
+Y +I + + ++ + +R G P +V N L++
Sbjct: 84 -------------PASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMY 130
Query: 166 CKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPS 225
K +D A ++F EMPNR D ++ ++NG +G + EA++LF+EM EK
Sbjct: 131 AKCGSLVD-ARKVFDEMPNR----DLCSWNVMVNGYAEVGLLEEARKLFDEMTEK----D 181
Query: 226 VVTYTSLIHGMCQSDNLGEAIRLLEEMKK-NGIEPNVFTYSTLMDGLCKGGHSLQAMELL 284
++T+++ G + D EA+ L M++ PN+FT S + + E+
Sbjct: 182 SYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIH 241
Query: 285 EMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAA 344
+V + V + +L++ K G EA I D++ ++ + + +I + +
Sbjct: 242 GHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI----VEKDVVSWTSMIDRYFKS 297
Query: 345 SSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPR-AFQLYLSMRTRG 403
S +++ + E+V P+ T++ V C+++ + Q++ M G
Sbjct: 298 SRWREGFSLFSELVGSCERPNEYTFA--------GVLNACADLTTEELGKQVHGYMTRVG 349
Query: 404 ISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCV-PDKGIWDVVMGG 452
L+ + K G++ A ++ DGC PD W ++GG
Sbjct: 350 FDPYSFASSSLVDMYTKCGNIESAKHVV-----DGCPKPDLVSWTSLIGG 394
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 101/220 (45%), Gaps = 9/220 (4%)
Query: 122 SYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHE 181
S+ ++ID + + + + + E+ P+ + ++ A C + T + Q+
Sbjct: 286 SWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNA-CADLTTEELGKQVHGY 344
Query: 182 MPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDN 241
M G P S+ +L++ + G++ AK + + + P +V++TSLI G Q+
Sbjct: 345 MTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPK----PDLVSWTSLIGGCAQNGQ 400
Query: 242 LGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVT-YG 300
EA++ + + K+G +P+ T+ ++ G + +E + KH + Y
Sbjct: 401 PDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYT 460
Query: 301 TLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISG 340
L++ L + G+F + ++ M +KP+ L+ ++ G
Sbjct: 461 CLVDLLARSGRFEQLKSVISEM---PMKPSKFLWASVLGG 497
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 7/185 (3%)
Query: 150 GIP-PSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVS 208
G P P +VS LI +N + D AL+ F + G +PD T+ +++ G V
Sbjct: 379 GCPKPDLVSWTSLIGGCAQNGQP-DEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVE 437
Query: 209 EAKELFNEMEEKG-FSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTL 267
+ E F + EK S + YT L+ + +S + ++ EM ++P+ F ++++
Sbjct: 438 KGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMP---MKPSKFLWASV 494
Query: 268 MDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGL 327
+ G G+ A E + + K N VTY T+ N GK+ E ++ RM+ G+
Sbjct: 495 LGGCSTYGNIDLAEEAAQELF-KIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGV 553
Query: 328 KPNAG 332
G
Sbjct: 554 TKRPG 558
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 147/352 (41%), Gaps = 60/352 (17%)
Query: 136 VKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYG 195
+K A +RE RK P +V+ N +I N ET + +L +F E+ G + S T
Sbjct: 272 IKMGSALFREFRK----PDIVAYNAMIHGYTSNGET-ELSLSLFKELMLSGARLRSSTLV 326
Query: 196 TL------------INGLC--------------------RMGSVSEAKELFNEMEEKGFS 223
+L I+G C ++ + A++LF+E EK
Sbjct: 327 SLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEK--- 383
Query: 224 PSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMEL 283
S+ ++ ++I G Q+ +AI L EM+K+ PN T + ++ + G +
Sbjct: 384 -SLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWV 442
Query: 284 LEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCA 343
+++ + ++ LI K G +EA + D M K N + +ISG+
Sbjct: 443 HDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT----KKNEVTWNTMISGYGL 498
Query: 344 ASSYQDAANFIDEMVLGGISPSRATW--SLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRT 401
Q+A N EM+ GI+P+ T+ L+ H GL D +++ SM
Sbjct: 499 HGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSH----AGLVKEGD-----EIFNSMIH 549
Query: 402 R-GISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGG 452
R G + + C++ + G L +A + +E M P +W+ ++G
Sbjct: 550 RYGFEPSVKHYACMVDILGRAGHLQRALQFIEAM---SIEPGSSVWETLLGA 598
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 116/260 (44%), Gaps = 10/260 (3%)
Query: 98 VHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVS 157
V+ L+ I K+ D + + S+ +I + + AI+ +REM+K P+ V+
Sbjct: 363 VYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVT 422
Query: 158 LNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEM 217
+ ++ A C + + + + + Y LI + GS++EA+ LF+ M
Sbjct: 423 ITCILSA-CAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM 481
Query: 218 EEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHS 277
+K + VT+ ++I G EA+ + EM +GI P T+ ++ G
Sbjct: 482 TKK----NEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLV 537
Query: 278 LQAMELLEMMVTKHN-RPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGK 336
+ E+ M+ ++ P++ Y +++ L + G A++ ++ M ++ P + ++
Sbjct: 538 KEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIE---PGSSVWET 594
Query: 337 IISGFCAASSYQDAANFIDE 356
++ G C + A + E
Sbjct: 595 LL-GACRIHKDTNLARTVSE 613
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 141/348 (40%), Gaps = 20/348 (5%)
Query: 86 DILLTICRGYGRVHRPLDAIRVFHKMEDFQL-KFTQKSYLTVIDILVEENHVKRAIAFYR 144
+ILL C GRV D + +ME L K +Y T+I + + K A+
Sbjct: 339 NILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKD 398
Query: 145 EMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRM 204
+M+ +G+ P+ + + LI A C N ++ A +F EM GC+P+S + L++
Sbjct: 399 DMKSVGVTPNTHTWSSLISA-CANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEA 457
Query: 205 GSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNL------GEAIR------LLEEM 252
A LF + + S+ + G S N+ G + ++
Sbjct: 458 CQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQAS 517
Query: 253 KKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKF 312
K+ +P TY+ L+ G + EL++ M + PN +T+ TLI+ G
Sbjct: 518 KRFCFKPTTATYNILLKAC--GTDYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDV 575
Query: 313 SEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLH 372
AV IL M G +P+ Y I + A + +EM I P+ T++
Sbjct: 576 EGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTL 635
Query: 373 VRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCK 420
++ + S ++ + +Y MR G LI+ +C+
Sbjct: 636 LKARSK----YGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEEWCE 679
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 150/379 (39%), Gaps = 36/379 (9%)
Query: 84 TEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYL--TVIDILVEENHVKRAIA 141
TE +L I G+G+ + + + + Q+ T Y+ T+ID+ ++
Sbjct: 231 TELLLCRIIHGFGKKGDMVSVMTAYEACK--QILDTPNMYICRTMIDVCGLCGDYVKSRY 288
Query: 142 FYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGL 201
Y ++ K I P++ +N L+ N + L+++ M D +Y L+
Sbjct: 289 IYEDLLKENIKPNIYVINSLMNV---NSHDLGYTLKVYKNMQILDVTADMTSYNILLKTC 345
Query: 202 CRMGSVSEAKELFNE---MEEKGF-SPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGI 257
C G V A++++ E ME G TY ++I + A+++ ++MK G+
Sbjct: 346 CLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGV 405
Query: 258 EPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVE 317
PN T+S+L+ G QA L E M+ PN + L++ + ++ A
Sbjct: 406 TPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFR 465
Query: 318 ILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAAN--------------FIDEMVLGGIS 363
+ + G N LY I SS N +I
Sbjct: 466 LFQSWK--GSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCFK 523
Query: 364 PSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGD 423
P+ AT+++ ++ T D R +L M++ G+S T+ LI GD
Sbjct: 524 PTTATYNILLKACGT---------DYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGD 574
Query: 424 LNKAARILEEMISDGCVPD 442
+ A RIL M S G PD
Sbjct: 575 VEGAVRILRTMHSAGTRPD 593
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 85/191 (44%), Gaps = 15/191 (7%)
Query: 142 FYREMRKMGIPPSVVSLNILIKA----LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTL 197
+ + ++ P+ + NIL+KA + KE +D EM + G P+ T+ TL
Sbjct: 513 YIQASKRFCFKPTTATYNILLKACGTDYYRGKELMD-------EMKSLGLSPNQITWSTL 565
Query: 198 INGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGI 257
I+ G V A + M G P VV YT+ I ++ L A L EEM++ I
Sbjct: 566 IDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQI 625
Query: 258 EPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHN---RPNMVTYGTLINGLCKEGKFSE 314
+PN TY+TL+ K G L+ + L + N +PN LI C EG E
Sbjct: 626 KPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEEWC-EGVIQE 684
Query: 315 AVEILDRMRLQ 325
+ D++ Q
Sbjct: 685 NGQSQDKISDQ 695
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 152/357 (42%), Gaps = 43/357 (12%)
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDIL--VEENHVKRAIAFYREMRKMGIPPSVVSLNI 160
D ++ + ED LK K + VI+ L V + + + Y+ M+ + + + S NI
Sbjct: 282 DYVKSRYIYEDL-LKENIKPNIYVINSLMNVNSHDLGYTLKVYKNMQILDVTADMTSYNI 340
Query: 161 LIKALCKNKETIDSALQIFHE---MPNRGC-QPDSYTYGTLINGLCRMGSVSEAKELFNE 216
L+K C +D A I+ E M + G + D++TY T+I A ++ ++
Sbjct: 341 LLKTCCLAGR-VDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDD 399
Query: 217 MEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGH 276
M+ G +P+ T++SLI + + +A L EEM +G EPN ++ L+ +
Sbjct: 400 MKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQ 459
Query: 277 SLQAMELLEM--------------MVTK--HNRPNMVTY---GTLINGLCKEGKFSEAVE 317
+A L + +V+K + PN++ G+L+N + S +
Sbjct: 460 YDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVN------RNSNSPY 513
Query: 318 ILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHN 377
I R KP Y ++ + Y +DEM G+SP++ TWS
Sbjct: 514 IQASKRF-CFKPTTATYNILLKA--CGTDYYRGKELMDEMKSLGLSPNQITWS------- 563
Query: 378 TVVQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEM 434
T++ + D A ++ +M + G ++ + IK + L A + EEM
Sbjct: 564 TLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEM 620
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 147/361 (40%), Gaps = 65/361 (18%)
Query: 146 MRKMGIPPSVVSLNILIKALCKNKETIDSALQIF-HEMPNRGCQPDSYTYGTLINGLCRM 204
++ I P+VVS N +I A C ++ +D AL+++ H + N P S TY L GL +
Sbjct: 207 FKQSNIVPNVVSYNQIINAHC-DEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQA 265
Query: 205 GSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKK-----NGIEP 259
G + +A L EM KG + Y +LI G + +A+ +E+K +GI
Sbjct: 266 GRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVN 325
Query: 260 NVF---------------TYSTLMDG---------------LCKGGHSLQAMELLEMMVT 289
F +Y +L+D K G +A L M+
Sbjct: 326 ATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLD 385
Query: 290 KHNRPNMV-----TYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGL-------YGKI 337
H PN++ T G ++N K G+FSEA+ ++ G K + Y I
Sbjct: 386 NHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKV---GSKVTSKPFVMDYLGYCNI 442
Query: 338 ISGFCAASSYQDAANFIDEMV---LGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQ 394
++ FC +A F E V L +PS H M + ++ +D A +
Sbjct: 443 VTRFCEQGMLTEAERFFAEGVSRSLPADAPS------HRAMIDAYLK--AERIDD--AVK 492
Query: 395 LYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVVMGGLW 454
+ M + + D + K G L ++A +L +M PD I+DVV+ GL
Sbjct: 493 MLDRMVDVNLRVVADFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLC 552
Query: 455 D 455
D
Sbjct: 553 D 553
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 155/356 (43%), Gaps = 25/356 (7%)
Query: 20 QLIKA---EKDINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERM 76
Q+I A E ++++A+ ++ A F T+ + LV A + A LL M
Sbjct: 221 QIINAHCDEGNVDEALEVYRHILANAP--FAPSSVTYRHLTKGLVQAGRIGDAASLLREM 278
Query: 77 KQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHV 136
+ + + RGY + A+ F +++ + T ++ E+ +
Sbjct: 279 LSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGND 338
Query: 137 KRAIAFYREMR----KMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPD-- 190
K A+ YR + +M P V L + +K K D A +F+EM + P+
Sbjct: 339 KEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKK-----DEAWALFNEMLDNHAPPNIL 393
Query: 191 ---SYTYGTLINGLCRMGSVSEA----KELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLG 243
S T G ++N +MG SEA K++ +++ K F + Y +++ C+ L
Sbjct: 394 SVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLT 453
Query: 244 EAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLI 303
EA R E + + ++ ++D K A+++L+ MV + R + +G +
Sbjct: 454 EAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLR-VVADFGARV 512
Query: 304 NG-LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMV 358
G L K GK +E+ E+L +M + KP+ +Y ++ G C + A + + EM+
Sbjct: 513 FGELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVGEMI 568
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 153 PSVVSLNILIKALCKNK---ETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSE 209
P+V + N +I A+ + K E+I S Q F + N P+ +Y +IN C G+V E
Sbjct: 178 PTVFTCNAIIAAMYRAKRYSESI-SLFQYFFKQSN--IVPNVVSYNQIINAHCDEGNVDE 234
Query: 210 AKELFNE-MEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLM 268
A E++ + F+PS VTY L G+ Q+ +G+A LL EM G + Y+ L+
Sbjct: 235 ALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLI 294
Query: 269 DGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVE----ILDR 321
G G +A+E + + +K + + T + ++G EA+E +LD+
Sbjct: 295 RGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDK 351
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/410 (19%), Positives = 166/410 (40%), Gaps = 20/410 (4%)
Query: 40 AEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVH 99
AE + R + ++SR+ E L++ + + VV D + G+
Sbjct: 58 AERESAERENRVLVRSLMSRI------SDREPLVKTLDKYVKVVRCDHCFLLFEELGKSD 111
Query: 100 RPLDAIRVFHKMEDFQLKFTQKS-YLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSL 158
+ L + VF M+ + Y +I ++ ++ + A+ + EM+ G P
Sbjct: 112 KWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVY 171
Query: 159 NILIKALCKNKETIDSALQIFHEMPN----RGCQPDSYTYGTLINGLCRMGSVSEAKELF 214
N LI A ++ + ++ + CQP+ TY L+ + G V + LF
Sbjct: 172 NALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALF 231
Query: 215 NEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKG 274
+++ SP V T+ ++ ++ + E +L M+ N +P++ T++ L+D K
Sbjct: 232 KDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKK 291
Query: 275 GHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLY 334
+ + + ++ +P + T+ ++I K +A + +M P+ Y
Sbjct: 292 QEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITY 351
Query: 335 GKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQ 394
+I + S A +E+ + L N +++ C N A +
Sbjct: 352 ECMIMMYGYCGSVSRAREIFEEV-------GESDRVLKASTLNAMLEVYCRNGLYIEADK 404
Query: 395 LYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARIL-EEMISDGCVPDK 443
L+ + + + T+ L K + K D+ + +IL ++M DG VP+K
Sbjct: 405 LFHNASAFRVHPDASTYKFLYKAYTK-ADMKEQVQILMKKMEKDGIVPNK 453
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 137/310 (44%), Gaps = 18/310 (5%)
Query: 43 SNGFRHDHTTFGVMISRLV----AANQFRSAEGLLERMKQ-ENC---VVTEDILLTICRG 94
++G R D + + +I+ + A G L++MK E C VVT +ILL
Sbjct: 161 NSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQ 220
Query: 95 YGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPS 154
G+V + ++A+ F ++ + ++ V+D + +K A MR P
Sbjct: 221 SGKVDQ-VNAL--FKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPD 277
Query: 155 VVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELF 214
+++ N+LI + K +E + Q F + +P T+ ++I + + +A+ +F
Sbjct: 278 IITFNVLIDSYGKKQE-FEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVF 336
Query: 215 NEMEEKGFSPSVVTYTSLI--HGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLC 272
+M + + PS +TY +I +G C S + A + EE+ ++ T + +++ C
Sbjct: 337 KKMNDMNYIPSFITYECMIMMYGYCGS--VSRAREIFEEVGESDRVLKASTLNAMLEVYC 394
Query: 273 KGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEIL-DRMRLQGLKPNA 331
+ G ++A +L P+ TY L K E V+IL +M G+ PN
Sbjct: 395 RNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTK-ADMKEQVQILMKKMEKDGIVPNK 453
Query: 332 GLYGKIISGF 341
+ + + F
Sbjct: 454 RFFLEALEVF 463
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 131/286 (45%), Gaps = 14/286 (4%)
Query: 66 FRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLT 125
+A L + M + N V ++ Y + P +A+ +F KM D +K T S +
Sbjct: 287 LETARQLFDGMLERNVVSWNSMI----DAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMG 342
Query: 126 VIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR 185
+ + ++R ++ ++G+ +V +N LI CK KE +D+A +F ++ +R
Sbjct: 343 ALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKE-VDTAASMFGKLQSR 401
Query: 186 GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEA 245
++ +I G + G +A F++M + P TY S+I + + A
Sbjct: 402 TL----VSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHA 457
Query: 246 IRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING 305
+ + ++ ++ NVF + L+D K G + A + +MM +H + T+ +I+G
Sbjct: 458 KWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERH----VTTWNAMIDG 513
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAA 351
G A+E+ + M+ +KPN + +IS C+ S +A
Sbjct: 514 YGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISA-CSHSGLVEAG 558
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 132/307 (42%), Gaps = 23/307 (7%)
Query: 45 GFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDA 104
G + + +IS + +A + +++ V ++L G+ + RP+DA
Sbjct: 367 GLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMIL----GFAQNGRPIDA 422
Query: 105 IRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKA 164
+ F +M +K +Y++VI + E + A + + + + +V L+
Sbjct: 423 LNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDM 482
Query: 165 LCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSP 224
K + + L IF M R T+ +I+G G A ELF EM++ P
Sbjct: 483 YAKCGAIMIARL-IFDMMSERHVT----TWNAMIDGYGTHGFGKAALELFEEMQKGTIKP 537
Query: 225 SVVTYTSLIHGMCQSDNLGEAIRLLEEMKKN-GIEPNVFTYSTLMDGLCKGGHSLQAMEL 283
+ VT+ S+I S + ++ MK+N IE ++ Y ++D L + G +A +
Sbjct: 538 NGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDF 597
Query: 284 LEMMVTKHNRPNMVTYGTLINGLC---KEGKFSE-AVEILDRMRLQGLKPNAGLYGKIIS 339
+ M K P + YG ++ G C K F+E A E RL L P+ G Y +++
Sbjct: 598 IMQMPVK---PAVNVYGAML-GACQIHKNVNFAEKAAE-----RLFELNPDDGGYHVLLA 648
Query: 340 GFCAASS 346
A+S
Sbjct: 649 NIYRAAS 655
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 136/311 (43%), Gaps = 55/311 (17%)
Query: 177 QIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGM 236
QI + G + + L++ CR GSV EA +F ++ K V Y +++ G
Sbjct: 55 QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSK----LNVLYHTMLKGF 110
Query: 237 CQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDG----------------LCKGGHSLQ- 279
+ +L +A++ M+ + +EP V+ ++ L+ L K G SL
Sbjct: 111 AKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDL 170
Query: 280 -AMELLEMMVTKHNRPN-------------MVTYGTLINGLCKEGKFSEAVEILDRMRLQ 325
AM LE M K + N +V++ T++ G + G A+E++ M +
Sbjct: 171 FAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEE 230
Query: 326 GLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQ--GL 383
LKP+ + I+S A S+ + + + + + G R+ + V + +V
Sbjct: 231 NLKPS---FITIVSVLPAVSALRLIS--VGKEIHG--YAMRSGFDSLVNISTALVDMYAK 283
Query: 384 CSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDK 443
C ++++ R QL+ M R + +++ +I + + + +A I ++M+ +G P
Sbjct: 284 CGSLETAR--QLFDGMLERNVV----SWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPT- 336
Query: 444 GIWDV-VMGGL 453
DV VMG L
Sbjct: 337 ---DVSVMGAL 344
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/279 (18%), Positives = 109/279 (39%), Gaps = 20/279 (7%)
Query: 153 PSVVSLNILIKALCKNKETI---DSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSE 209
P LN+L + K + D ALQ F M +P Y + L+ +
Sbjct: 94 PIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRV 153
Query: 210 AKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMD 269
KE+ + + GFS + T L + + + EA ++ + M E ++ +++T++
Sbjct: 154 GKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP----ERDLVSWNTIVA 209
Query: 270 GLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKP 329
G + G + A+E+++ M ++ +P+ +T +++ + S EI G
Sbjct: 210 GYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDS 269
Query: 330 NAGLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDS 389
+ ++ + S + A D M+ + +W N+++ N +
Sbjct: 270 LVNISTALVDMYAKCGSLETARQLFDGMLERNV----VSW-------NSMIDAYVQNENP 318
Query: 390 PRAFQLYLSMRTRGIS-IEIDTFDCLIKCFCKRGDLNKA 427
A ++ M G+ ++ L C GDL +
Sbjct: 319 KEAMLIFQKMLDEGVKPTDVSVMGALHAC-ADLGDLERG 356
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 152/336 (45%), Gaps = 30/336 (8%)
Query: 104 AIRVFHKM-EDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
A++ ++ M DF T+ + +T++ + HV + ++ K+G ++ + L+
Sbjct: 122 AVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLL 181
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGF 222
+ N I A ++F+ + +R ++ Y +L+ GL G + +A +LF ME+
Sbjct: 182 Y-MYANVGCISDAKKVFYGLDDR----NTVMYNSLMGGLLACGMIEDALQLFRGMEKDS- 235
Query: 223 SPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAME 282
V++ ++I G+ Q+ EAI EMK G++ + + + +++ C G ++ +
Sbjct: 236 ----VSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPA-CGGLGAINEGK 290
Query: 283 LLEMMVTKHNRPNMVTYGT-LINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGF 341
+ + + N + + G+ LI+ CK A + DRM+ + N + ++ G+
Sbjct: 291 QIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK----QKNVVSWTAMVVGY 346
Query: 342 CAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGL--CSNVDS-PRAFQLYLS 398
++A +M GI P H T+ Q + C+NV S Q +
Sbjct: 347 GQTGRAEEAVKIFLDMQRSGIDPD----------HYTLGQAISACANVSSLEEGSQFHGK 396
Query: 399 MRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEM 434
T G+ + + L+ + K GD++ + R+ EM
Sbjct: 397 AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEM 432
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 154/373 (41%), Gaps = 71/373 (19%)
Query: 103 DAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILI 162
DA +VF+ ++D Y +++ L+ ++ A+ +R M K VS +I
Sbjct: 192 DAKKVFYGLDDRNTVM----YNSLMGGLLACGMIEDALQLFRGMEK-----DSVSWAAMI 242
Query: 163 KALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSE------------- 209
K L +N A++ F EM +G + D Y +G+++ +G+++E
Sbjct: 243 KGLAQNG-LAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNF 301
Query: 210 ----------------------AKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIR 247
AK +F+ M++K +VV++T+++ G Q+ EA++
Sbjct: 302 QDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK----NVVSWTAMVVGYGQTGRAEEAVK 357
Query: 248 LLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLC 307
+ +M+++GI+P+ +T + ++ ++E K ++ Y T+ N L
Sbjct: 358 IFLDMQRSGIDPDHYTLGQAISACA----NVSSLEEGSQFHGKAITSGLIHYVTVSNSLV 413
Query: 308 ----KEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAANFIDEMVLGGIS 363
K G ++ + + M ++ +A + ++S + + D+MV G+
Sbjct: 414 TLYGKCGDIDDSTRLFNEMNVR----DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLK 469
Query: 364 PSRATWSLHVRMHNTVVQGLCSNVDSPRAFQLYLSMRTR--GISIEIDTFDCLIKCFCKR 421
P T T V CS Q Y + T GI I + C+I F +
Sbjct: 470 PDGVTL--------TGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRS 521
Query: 422 GDLNKAARILEEM 434
G L +A R + M
Sbjct: 522 GRLEEAMRFINGM 534
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 118/267 (44%), Gaps = 14/267 (5%)
Query: 48 HDHTTFG-VMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIR 106
DH G +I A+ + +RMKQ+N V +++ GYG+ R +A++
Sbjct: 302 QDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVV----GYGQTGRAEEAVK 357
Query: 107 VFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALC 166
+F M+ + + I + ++ F+ + G+ V N L+
Sbjct: 358 IFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYG 417
Query: 167 KNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSV 226
K + ID + ++F+EM R D+ ++ +++ + G E +LF++M + G P
Sbjct: 418 KCGD-IDDSTRLFNEMNVR----DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDG 472
Query: 227 VTYTSLIHGMCQSDNLGEAIRLLEEM-KKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLE 285
VT T +I ++ + + R + M + GI P++ YS ++D + G +AM +
Sbjct: 473 VTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFIN 532
Query: 286 MMVTKHNRPNMVTYGTLINGLCKEGKF 312
M P+ + + TL++ +G
Sbjct: 533 GMPFP---PDAIGWTTLLSACRNKGNL 556
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/410 (19%), Positives = 166/410 (40%), Gaps = 20/410 (4%)
Query: 40 AEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTEDILLTICRGYGRVH 99
AE + R + ++SR+ E L++ + + VV D + G+
Sbjct: 58 AERESAERENRVLVRSLMSRIS------DREPLVKTLDKYVKVVRCDHCFLLFEELGKSD 111
Query: 100 RPLDAIRVFHKMEDFQLKFTQKS-YLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSL 158
+ L + VF M+ + Y +I ++ ++ + A+ + EM+ G P
Sbjct: 112 KWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVY 171
Query: 159 NILIKALCKNKETIDSALQIFHEMPN----RGCQPDSYTYGTLINGLCRMGSVSEAKELF 214
N LI A ++ + ++ + CQP+ TY L+ + G V + LF
Sbjct: 172 NALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALF 231
Query: 215 NEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKG 274
+++ SP V T+ ++ ++ + E +L M+ N +P++ T++ L+D K
Sbjct: 232 KDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKK 291
Query: 275 GHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLY 334
+ + + ++ +P + T+ ++I K +A + +M P+ Y
Sbjct: 292 QEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITY 351
Query: 335 GKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDSPRAFQ 394
+I + S A +E+ + L N +++ C N A +
Sbjct: 352 ECMIMMYGYCGSVSRAREIFEEV-------GESDRVLKASTLNAMLEVYCRNGLYIEADK 404
Query: 395 LYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARIL-EEMISDGCVPDK 443
L+ + + + T+ L K + K D+ + +IL ++M DG VP+K
Sbjct: 405 LFHNASAFRVHPDASTYKFLYKAYTK-ADMKEQVQILMKKMEKDGIVPNK 453
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 137/310 (44%), Gaps = 18/310 (5%)
Query: 43 SNGFRHDHTTFGVMISRLV----AANQFRSAEGLLERMKQ-ENC---VVTEDILLTICRG 94
++G R D + + +I+ + A G L++MK E C VVT +ILL
Sbjct: 161 NSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQ 220
Query: 95 YGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPS 154
G+V + ++A+ F ++ + ++ V+D + +K A MR P
Sbjct: 221 SGKVDQ-VNAL--FKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPD 277
Query: 155 VVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELF 214
+++ N+LI + K +E + Q F + +P T+ ++I + + +A+ +F
Sbjct: 278 IITFNVLIDSYGKKQE-FEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVF 336
Query: 215 NEMEEKGFSPSVVTYTSLI--HGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLC 272
+M + + PS +TY +I +G C S + A + EE+ ++ T + +++ C
Sbjct: 337 KKMNDMNYIPSFITYECMIMMYGYCGS--VSRAREIFEEVGESDRVLKASTLNAMLEVYC 394
Query: 273 KGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEIL-DRMRLQGLKPNA 331
+ G ++A +L P+ TY L K E V+IL +M G+ PN
Sbjct: 395 RNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTK-ADMKEQVQILMKKMEKDGIVPNK 453
Query: 332 GLYGKIISGF 341
+ + + F
Sbjct: 454 RFFLEALEVF 463
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 148/336 (44%), Gaps = 30/336 (8%)
Query: 126 VIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNR 185
+I V++ V+ AI + MR + V+L L+ A + E + ++
Sbjct: 346 IISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAART-ENLKLGKEVQCYCIRH 404
Query: 186 GCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEA 245
+ D T+++ + GS+ +AK++F+ EK ++ + +L+ +S GEA
Sbjct: 405 SFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEK----DLILWNTLLAAYAESGLSGEA 460
Query: 246 IRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLING 305
+RL M+ G+ PNV T++ ++ L + G +A ++ M + PN++++ T++NG
Sbjct: 461 LRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNG 520
Query: 306 LCKEGKFSEAVEILDRMRLQGLKPNA--------------------GLYGKIISGFCAAS 345
+ + G EA+ L +M+ GL+PNA ++G II +S
Sbjct: 521 MVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSS 580
Query: 346 SYQDAANFIDEMV-LGGISPSRATWSL----HVRMHNTVVQGLCSNVDSPRAFQLYLSMR 400
+ +D G I+ + + + + N ++ + A LY S+
Sbjct: 581 LVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLE 640
Query: 401 TRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMIS 436
G+ + T ++ GD+N+A I +++S
Sbjct: 641 GVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVS 676
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 147/314 (46%), Gaps = 46/314 (14%)
Query: 171 TIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYT 230
+D A ++F E+P+R ++ + L+ G + G EA LF++M ++G P+ VT +
Sbjct: 223 VLDDASKVFDEIPDR----NAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVS 278
Query: 231 SLIHGMCQSDNLGEAIRLLEEMKK-------NGIEPNVFTYSTLMDGLCKGGHSLQAMEL 283
+ + S N+G +EE K+ NG+E + ++L++ CK G +E
Sbjct: 279 TCLSA---SANMGG----VEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVG----LIEY 327
Query: 284 LEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPN----AGL------ 333
EM+ + ++VT+ +I+G ++G +A+ + MRL+ LK + A L
Sbjct: 328 AEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAAR 387
Query: 334 -----YGKIISGFCAASSYQD----AANFIDEMV-LGGISPSRATWSLHVR----MHNTV 379
GK + +C S++ A+ +D G I ++ + V + NT+
Sbjct: 388 TENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTL 447
Query: 380 VQGLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGC 439
+ + S A +L+ M+ G+ + T++ +I + G +++A + +M S G
Sbjct: 448 LAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGI 507
Query: 440 VPDKGIWDVVMGGL 453
+P+ W +M G+
Sbjct: 508 IPNLISWTTMMNGM 521
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 95/436 (21%), Positives = 173/436 (39%), Gaps = 94/436 (21%)
Query: 67 RSAEGLLERMKQENCVVTEDILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTV 126
R G + + E+CV L + YG+ DA +VF ++ D ++ +
Sbjct: 193 RGVHGYVVKSGLEDCVFVASSLADM---YGKCGVLDDASKVFDEIPDRN----AVAWNAL 245
Query: 127 IDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALCKNKETIDSALQIFHEMPNRG 186
+ V+ + AI + +MRK G+ P+ V+++ + A N ++ Q G
Sbjct: 246 MVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSA-SANMGGVEEGKQSHAIAIVNG 304
Query: 187 CQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAI 246
+ D+ +L+N C++G + A+ +F+ M EK VVT+ +I G Q + +AI
Sbjct: 305 MELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEK----DVVTWNLIISGYVQQGLVEDAI 360
Query: 247 RL-----LEEMK------------------------------KNGIEPNVFTYSTLMDGL 271
+ LE++K ++ E ++ ST+MD
Sbjct: 361 YMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMY 420
Query: 272 CKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNA 331
K G + A ++ + V K +++ + TL+ + G EA+ + M+L+G+ PN
Sbjct: 421 AKCGSIVDAKKVFDSTVEK----DLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNV 476
Query: 332 GLYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVD--- 388
+ II +A + +M GI P+ +W+ M N +VQ CS
Sbjct: 477 ITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWT---TMMNGMVQNGCSEEAILF 533
Query: 389 ---------SPRAFQLYLSM------------------------RTRGISIEIDTFDCLI 415
P AF + +++ + +SIE D
Sbjct: 534 LRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYA 593
Query: 416 KCFCKRGDLNKAARIL 431
KC GD+NKA ++
Sbjct: 594 KC----GDINKAEKVF 605
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 129/264 (48%), Gaps = 17/264 (6%)
Query: 175 ALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIH 234
AL++F+ M G P+ T+ +I L R G V EAK++F +M+ G P+++++T++++
Sbjct: 460 ALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMN 519
Query: 235 GMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKH-NR 293
GM Q+ EAI L +M+++G+ PN F+ + + C SL + + ++
Sbjct: 520 GMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSA-CAHLASLHIGRTIHGYIIRNLQH 578
Query: 294 PNMVTYGT-LINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAAN 352
++V+ T L++ K G ++A ++ +L P L +IS + + ++A
Sbjct: 579 SSLVSIETSLVDMYAKCGDINKAEKVFGS-KLYSELP---LSNAMISAYALYGNLKEAIA 634
Query: 353 FIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNV-DSPRAFQLYLSMRT-RGISIEIDT 410
+ G+ P T T V C++ D +A +++ + + R + ++
Sbjct: 635 LYRSLEGVGLKPDNITI--------TNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEH 686
Query: 411 FDCLIKCFCKRGDLNKAARILEEM 434
+ ++ G+ KA R++EEM
Sbjct: 687 YGLMVDLLASAGETEKALRLIEEM 710
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 79/170 (46%), Gaps = 5/170 (2%)
Query: 172 IDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEM-EEKGFSPSVVTYT 230
+ A+ ++ + G +PD+ T +++ G +++A E+F ++ ++ P + Y
Sbjct: 629 LKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYG 688
Query: 231 SLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTK 290
++ + + +A+RL+EEM +P+ +L+ C + ++ L + +
Sbjct: 689 LMVDLLASAGETEKALRLIEEMP---FKPDARMIQSLVAS-CNKQRKTELVDYLSRKLLE 744
Query: 291 HNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISG 340
N Y T+ N EG + E V++ + M+ +GLK G I+G
Sbjct: 745 SEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITG 794
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 165/363 (45%), Gaps = 30/363 (8%)
Query: 94 GYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPP 153
GY ++ AI V+ ME +K + + ++ + R FY +++ G+
Sbjct: 231 GYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRM 290
Query: 154 SVVSLNILIKALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKEL 213
++ +N L+ K + I A +IF + R ++ T+I+G R G + +++L
Sbjct: 291 TIPLVNALMDMFSKCGD-IHEARRIFDNLEKRTI----VSWTTMISGYARCGLLDVSRKL 345
Query: 214 FNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCK 273
F++MEEK VV + ++I G Q+ +A+ L +EM+ + +P+ T + +
Sbjct: 346 FDDMEEK----DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQ 401
Query: 274 GGHSLQAMELLEMMVTKHNRPNMVTYGT-LINGLCKEGKFSEAVEILDRMRLQGLKPNAG 332
G +L + + K++ V GT L++ K G SEA+ + ++ + N+
Sbjct: 402 LG-ALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR----NSL 456
Query: 333 LYGKIISGFCAASSYQDAANFIDEMVLGGISPSRATWS--LHVRMHNTVVQGLCSNVDSP 390
Y II G A ++ +EM+ GI+P T+ L H ++Q +
Sbjct: 457 TYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQ-------TG 509
Query: 391 RAFQLYLSMRTR-GISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIWDVV 449
R + + M++R ++ ++ + ++ + G L +A R++E M + D +W +
Sbjct: 510 RDY--FSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEA---DAAVWGAL 564
Query: 450 MGG 452
+ G
Sbjct: 565 LFG 567
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 120/302 (39%), Gaps = 48/302 (15%)
Query: 172 IDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTS 231
+++A ++F E P R D ++ LING ++G +A ++ ME +G P VT
Sbjct: 207 MENARKVFDESPVR----DLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIG 262
Query: 232 LIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKH 291
L+ +L E +K+NG+ + + LMD K G +A + + +
Sbjct: 263 LVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNL---- 318
Query: 292 NRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASSYQDAA 351
+ +V++ T+I+G + G + ++ D M + + L+ +I G A QDA
Sbjct: 319 EKRTIVSWTTMISGYARCGLLDVSRKLFDDME----EKDVVLWNAMIGGSVQAKRGQDAL 374
Query: 352 NFIDEMVLGGISPSRAT------------------W----------SLHVRMHNTVVQ-- 381
EM P T W SL+V + ++V
Sbjct: 375 ALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMY 434
Query: 382 GLCSNVDSPRAFQLYLSMRTRGISIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVP 441
C N+ A ++ ++TR T+ +I GD + A EMI G P
Sbjct: 435 AKCGNIS--EALSVFHGIQTRNSL----TYTAIIGGLALHGDASTAISYFNEMIDAGIAP 488
Query: 442 DK 443
D+
Sbjct: 489 DE 490
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 139/327 (42%), Gaps = 25/327 (7%)
Query: 27 DINKAVLMFDSATAEYSNGFRHDHTTFGVMISRLVAANQFRSAEGLLERMKQENCVVTED 86
DI++A +FD N + ++ MIS + L + M++++ V+
Sbjct: 307 DIHEARRIFD-------NLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNA 359
Query: 87 ILLTICRGYGRVHRPLDAIRVFHKMEDFQLKFTQKSYLTVIDILVEENHVKRAIAFYREM 146
++ G + R DA+ +F +M+ K + + + + + + I +R +
Sbjct: 360 MI----GGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYI 415
Query: 147 RKMGIPPSVVSLNILIK--ALCKNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRM 204
K + +V L+ A C N I AL +FH + R +S TY +I GL
Sbjct: 416 EKYSLSLNVALGTSLVDMYAKCGN---ISEALSVFHGIQTR----NSLTYTAIIGGLALH 468
Query: 205 GSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSDNLGEAIRLLEEMKKN-GIEPNVFT 263
G S A FNEM + G +P +T+ L+ C + +MK + P +
Sbjct: 469 GDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKH 528
Query: 264 YSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMR 323
YS ++D L + G +A L+E M + + +G L+ G C+ E E +
Sbjct: 529 YSIMVDLLGRAGLLEEADRLMESMPME---ADAAVWGALLFG-CRMHGNVELGEKAAKKL 584
Query: 324 LQGLKPNAGLYGKIISGFCAASSYQDA 350
L+ ++G+Y + + A+ ++DA
Sbjct: 585 LELDPSDSGIYVLLDGMYGEANMWEDA 611
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 169/402 (42%), Gaps = 39/402 (9%)
Query: 52 TFGVMISRLVAANQFRSAEGLLERMKQENCVV----TEDILLTICRGYGRVHRPLDAIRV 107
T+ MI A F GL RM+QE V T ++ CR + R +
Sbjct: 241 TWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGL 300
Query: 108 FHKME-DFQLKFTQKSYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVVSLNILIKALC 166
+M +F L F S +++ L ++ A A + M+ VS N LI L
Sbjct: 301 VSRMPLEFDL-FLGNSLMSMYSKL---GYMGEAKAVFGVMKN----KDSVSWNSLITGLV 352
Query: 167 KNKETIDSALQIFHEMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSV 226
+ K+ I A ++F +MP + D ++ +I G G +S+ ELF M EK
Sbjct: 353 QRKQ-ISEAYELFEKMPGK----DMVSWTDMIKGFSGKGEISKCVELFGMMPEK----DN 403
Query: 227 VTYTSLIHGMCQSDNLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEM 286
+T+T++I + EA+ +M + + PN +T+S+++ ++ +++
Sbjct: 404 ITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGR 463
Query: 287 MVTKHNRPNMVTYGTLINGLCKEGKFSEAVEILDRMRLQGLKPNAGLYGKIISGFCAASS 346
+V + ++ +L++ CK G ++A +I + +PN Y +ISG+
Sbjct: 464 VVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCIS----EPNIVSYNTMISGYSYNGF 519
Query: 347 YQDAANFIDEMVLGGISPSRATWSLHVRMHNTVVQGLCSNVDS-PRAFQLYLSMRTR-GI 404
+ A + G P+ T+ + C +V ++ + SM++ I
Sbjct: 520 GKKALKLFSMLESSGKEPNGVTF--------LALLSACVHVGYVDLGWKYFKSMKSSYNI 571
Query: 405 SIEIDTFDCLIKCFCKRGDLNKAARILEEMISDGCVPDKGIW 446
D + C++ + G L+ A+ ++ M C P G+W
Sbjct: 572 EPGPDHYACMVDLLGRSGLLDDASNLISTM---PCKPHSGVW 610
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 20/206 (9%)
Query: 122 SYLTVIDILVEENHVKRAIAFYREMRKMGIPPSVV-SLNILIKALCKNKETIDSALQIFH 180
S++ +I E + +A + EM P V S N +I A+ KNK + A ++F
Sbjct: 83 SWIAMISAYAENGKMSKAWQVFDEM-----PVRVTTSYNAMITAMIKNKCDLGKAYELFC 137
Query: 181 EMPNRGCQPDSYTYGTLINGLCRMGSVSEAKELFNEMEEKGFSPSVVTYTSLIHGMCQSD 240
++P + ++ +Y T+I G R G EA+ L+ E K F SV + L+ G ++
Sbjct: 138 DIPEK----NAVSYATMITGFVRAGRFDEAEFLYAETPVK-FRDSVAS-NVLLSGYLRAG 191
Query: 241 NLGEAIRLLEEMKKNGIEPNVFTYSTLMDGLCKGGHSLQAMELLEMMVTKHNRPNMVTYG 300
EA+R+ + M V + S+++ G CK G + A L + M + N++T+
Sbjct: 192 KWNEAVRVFQGMAVK----EVVSCSSMVHGYCKMGRIVDARSLFDRMTER----NVITWT 243
Query: 301 TLINGLCKEGKFSEAVEILDRMRLQG 326
+I+G K G F + + RMR +G
Sbjct: 244 AMIDGYFKAGFFEDGFGLFLRMRQEG 269