Miyakogusa Predicted Gene

Lj6g3v2006450.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2006450.3 Non Chatacterized Hit- tr|G7LCF2|G7LCF2_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,34.76,2e-16,seg,NULL; FAMILY NOT NAMED,NULL; DUF599,Protein
of unknown function DUF599,CUFF.60474.3
         (231 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G46060.1 | Symbols:  | Protein of unknown function, DUF599 | ...   211   3e-55
AT3G18215.1 | Symbols:  | Protein of unknown function, DUF599 | ...   144   7e-35
AT5G24600.1 | Symbols:  | Protein of unknown function, DUF599 | ...   138   3e-33
AT5G24600.2 | Symbols:  | Protein of unknown function, DUF599 | ...   138   4e-33
AT5G10580.1 | Symbols:  | Protein of unknown function, DUF599 | ...   100   6e-22
AT4G31330.1 | Symbols:  | Protein of unknown function, DUF599 | ...    97   1e-20
AT5G10580.2 | Symbols:  | Protein of unknown function, DUF599 | ...    96   3e-20
AT5G24790.1 | Symbols:  | Protein of unknown function, DUF599 | ...    81   7e-16
AT5G43180.1 | Symbols:  | Protein of unknown function, DUF599 | ...    50   2e-06

>AT5G46060.1 | Symbols:  | Protein of unknown function, DUF599 |
           chr5:18681533-18682459 FORWARD LENGTH=248
          Length = 248

 Score =  211 bits (538), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 109/222 (49%), Positives = 149/222 (67%), Gaps = 4/222 (1%)

Query: 1   MSMEFQREYLDLILVPSGLLIMFAYHLFLLYKYVNRPHTTVMGFENDDKRTWVAKIMQAE 60
           M +  ++EYLDL+LVP GL+I+ +YHLFLLY+ +  P+ T++GF N DK  WV +IMQA 
Sbjct: 1   MEIFVKKEYLDLVLVPFGLIIVLSYHLFLLYRILYFPYHTIIGFMNIDKSIWVDRIMQAR 60

Query: 61  NKDVKTALSVLQSHSSTATFLASVSLTLCALIGAWIANN--SSVFFQSQLIYGDTRPTTI 118
             ++  AL+VL S  S +TF+AS++LTL +LIGAWI ++  S   F    IYGDT   T+
Sbjct: 61  KDELGGALTVLSSSISASTFMASIALTLSSLIGAWIGSSPVSMTVFTGHFIYGDTSSITM 120

Query: 119 SIKYICLLICFLLAFSCFVQSARHFVHANYLISMPDSFVPVSSVQLAVVRGSDFWSXXXX 178
            IKY  LLICFL+AF CF+QS R F+HANYLI+ P   +P   V+  V+RG ++WS    
Sbjct: 121 VIKYTSLLICFLVAFCCFIQSTRCFLHANYLITTPGEDIPPDMVKRFVLRGGNYWSLGLR 180

Query: 179 XXXXXXXXXXWFFGPMPMFVCSVAMVLVLHYLDSNS--RPLH 218
                     W FGP+PMF+ SV MV+ L++LDSNS  +PL+
Sbjct: 181 ALYLALDLLLWLFGPVPMFINSVLMVICLYFLDSNSVAQPLY 222


>AT3G18215.1 | Symbols:  | Protein of unknown function, DUF599 |
           chr3:6240968-6242358 FORWARD LENGTH=244
          Length = 244

 Score =  144 bits (362), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 81/222 (36%), Positives = 129/222 (58%), Gaps = 7/222 (3%)

Query: 5   FQREYLDLILVPSGLLIMFAYHLFLLYKYVNRPHTTVMGFENDDKRTWVAKIMQAENKDV 64
           +  E LDL+LVP+GL++M AYH++L+Y  ++RP  TV+    + +R WV  +M    K+ 
Sbjct: 2   WTEESLDLVLVPTGLVVMVAYHVWLVYAILHRPKLTVIALNAESRRQWVFSMMTEPLKNG 61

Query: 65  KTALSVLQSHSSTATFLASVSLTLCALIGAWIANNSSVFFQ-SQLIYGDTRPTTISIKYI 123
             A+  ++++   +T LA+ ++TLC++IG +++N+SS     + LIYG   P   S K  
Sbjct: 62  TLAVQTIRNNIMASTLLATTAITLCSIIGVFVSNSSSSKSTATNLIYGSKSPRLASFKNF 121

Query: 124 CLLICFLLAFSCFVQSARHFVHANYLISMPDSFVP---VSSVQLAVVRGSDFWSXXXXXX 180
            +LICFL+AF C +QS R++ H ++L+++P S         V   + R S FWS      
Sbjct: 122 AILICFLMAFLCNIQSIRYYAHVSFLVTVPVSRGKREHCEYVSRNLNRASYFWSLGLRAF 181

Query: 181 XXXXXXXXWFFGPMPMFVCSVAMVLVLHYLDSN---SRPLHS 219
                   W FGP+PMFVC   M  +L++LD+    +R LHS
Sbjct: 182 YFSFPLFLWTFGPIPMFVCCCMMSSILYFLDTTTSFTRHLHS 223


>AT5G24600.1 | Symbols:  | Protein of unknown function, DUF599 |
           chr5:8421790-8423342 REVERSE LENGTH=248
          Length = 248

 Score =  138 bits (347), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 81/224 (36%), Positives = 123/224 (54%), Gaps = 22/224 (9%)

Query: 6   QREYLDLILVPSGLLIMFAYHLFLLYKYVNRPHTTVMGFENDDKRTWVAKIMQAENKDVK 65
           +REYLD  LVP GL +M  YHL+LLY+ ++RP +TV+G    ++R WV  +M+  +K+  
Sbjct: 2   KREYLDYTLVPLGLALMVFYHLWLLYRIIHRPSSTVVGLNAFNRRLWVQAMMEDSSKNGV 61

Query: 66  TALSVLQSHSSTATFLASVSLTLCALIGAWI---ANNSSVFFQSQLIYGDTRPTTISIKY 122
            A+  L+++   +T LAS ++ LC+LI   +       SV+F    ++GD      S+K+
Sbjct: 62  LAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSATGERSVWF----VFGDKSDRAFSLKF 117

Query: 123 ICLLICFLLAFSCFVQSARHFVHANYLISMP-DSFVPVSS--------------VQLAVV 167
             +L+CFL+AF   VQS R++ HA+ LI++P    + VSS              V   V 
Sbjct: 118 FAILVCFLVAFLLNVQSIRYYSHASILINVPFKQLMAVSSGGRGNGSLMINQDYVAATVN 177

Query: 168 RGSDFWSXXXXXXXXXXXXXXWFFGPMPMFVCSVAMVLVLHYLD 211
           RGS FWS              W FGP+PMF+    +V  L++LD
Sbjct: 178 RGSYFWSLGLRAFYFSSPLFLWIFGPIPMFITCCVLVCSLYFLD 221


>AT5G24600.2 | Symbols:  | Protein of unknown function, DUF599 |
           chr5:8421697-8423342 REVERSE LENGTH=243
          Length = 243

 Score =  138 bits (347), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 81/224 (36%), Positives = 123/224 (54%), Gaps = 22/224 (9%)

Query: 6   QREYLDLILVPSGLLIMFAYHLFLLYKYVNRPHTTVMGFENDDKRTWVAKIMQAENKDVK 65
           +REYLD  LVP GL +M  YHL+LLY+ ++RP +TV+G    ++R WV  +M+  +K+  
Sbjct: 2   KREYLDYTLVPLGLALMVFYHLWLLYRIIHRPSSTVVGLNAFNRRLWVQAMMEDSSKNGV 61

Query: 66  TALSVLQSHSSTATFLASVSLTLCALIGAWI---ANNSSVFFQSQLIYGDTRPTTISIKY 122
            A+  L+++   +T LAS ++ LC+LI   +       SV+F    ++GD      S+K+
Sbjct: 62  LAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSATGERSVWF----VFGDKSDRAFSLKF 117

Query: 123 ICLLICFLLAFSCFVQSARHFVHANYLISMP-DSFVPVSS--------------VQLAVV 167
             +L+CFL+AF   VQS R++ HA+ LI++P    + VSS              V   V 
Sbjct: 118 FAILVCFLVAFLLNVQSIRYYSHASILINVPFKQLMAVSSGGRGNGSLMINQDYVAATVN 177

Query: 168 RGSDFWSXXXXXXXXXXXXXXWFFGPMPMFVCSVAMVLVLHYLD 211
           RGS FWS              W FGP+PMF+    +V  L++LD
Sbjct: 178 RGSYFWSLGLRAFYFSSPLFLWIFGPIPMFITCCVLVCSLYFLD 221


>AT5G10580.1 | Symbols:  | Protein of unknown function, DUF599 |
           chr5:3347511-3348657 FORWARD LENGTH=246
          Length = 246

 Score =  100 bits (250), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 108/221 (48%), Gaps = 12/221 (5%)

Query: 3   MEFQREYLDLILVPSGLLIMFAYHLFLLYKYVNRPHTTVMGFENDDKRTWVAKIMQAENK 62
           ME+++ YLD +LVPS LL+MF YH++L YK    P  T++G  +  +R+WVA IM+   K
Sbjct: 1   MEWEKWYLDAVLVPSALLMMFGYHIYLWYKVRTDPFCTIVGTNSRARRSWVAAIMKDNEK 60

Query: 63  DVKTALSVLQSHSSTATFLASVSLTLCALIGAWIANNSSVFFQ-SQLIYGDTRPTTISIK 121
               A+  L++     T +A+  + LCA + A +++  S+    +  +YG     T+++K
Sbjct: 61  KNILAVQTLRNTIMGGTLMATTCILLCAGLAAVLSSTYSIKKPLNDAVYGAHGDFTVALK 120

Query: 122 YICLLICFLLAFSCFVQSARHFVHANYLISMPD-----------SFVPVSSVQLAVVRGS 170
           Y+ +L  FL AF     S R     N LI+ P            SFV    V   + +  
Sbjct: 121 YVTILTIFLFAFFSHSLSIRFINQVNILINAPQEPFSDDFGEIGSFVTPEYVSELLEKAF 180

Query: 171 DFWSXXXXXXXXXXXXXXWFFGPMPMFVCSVAMVLVLHYLD 211
              +              W FGP+ +F+ S  ++ VL+ LD
Sbjct: 181 LLNTVGNRLFYMGLPLMLWIFGPVLVFLSSALIIPVLYNLD 221


>AT4G31330.1 | Symbols:  | Protein of unknown function, DUF599 |
           chr4:15202354-15203151 FORWARD LENGTH=239
          Length = 239

 Score = 96.7 bits (239), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 113/219 (51%), Gaps = 10/219 (4%)

Query: 3   MEFQREYLDLILVPSGLLIMFAYHLFLLYKYVNRPHTTVMGFENDDKRTWVAKIMQAENK 62
           ME++  YLD+ILVP GL++  +YH++L +K   +P TT++G     +R WVA I++  +K
Sbjct: 1   MEWRECYLDVILVPLGLMVYASYHVYLWHKLRTQPLTTIIGTNARARRFWVASIIKDNDK 60

Query: 63  DVKTALSVLQSHSSTATFLASVSLTLCALIGAWIANNSSVFFQ-SQLIYGDTRPTTISIK 121
               A+  L++    +T +A+ S+ LCA + A +++  +V    +  ++G      +++K
Sbjct: 61  KNILAVQTLRNCIMGSTLMATTSILLCAGLAAVLSSTYAVKKPLNDAVFGARGEFMVALK 120

Query: 122 YICLLICFLLAFSCFVQSARHFVHANYLISMP-------DSFVPVSSVQLA--VVRGSDF 172
           Y+ +L  FL +F     S R     N LI+ P       D  +  +   +A  + RG   
Sbjct: 121 YVTILTIFLFSFFSHSLSIRFINQVNILINTPFPPEELEDEMMMTAEEYVAELLERGFIL 180

Query: 173 WSXXXXXXXXXXXXXXWFFGPMPMFVCSVAMVLVLHYLD 211
            +              W FGP+ +F+CSV MV +L+ LD
Sbjct: 181 NTVGNRLFYAALPLMLWIFGPVLVFLCSVVMVPLLYNLD 219


>AT5G10580.2 | Symbols:  | Protein of unknown function, DUF599 |
           chr5:3347511-3349045 FORWARD LENGTH=192
          Length = 192

 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 56/165 (33%), Positives = 89/165 (53%), Gaps = 6/165 (3%)

Query: 3   MEFQREYLDLILVPSGLLIMFAYHLFLLYKYVNRPHTTVMGFENDDKRTWVAKIMQAENK 62
           ME+++ YLD +LVPS LL+MF YH++L YK    P  T++G  +  +R+WVA IM+   K
Sbjct: 1   MEWEKWYLDAVLVPSALLMMFGYHIYLWYKVRTDPFCTIVGTNSRARRSWVAAIMKDNEK 60

Query: 63  DVKTALSVLQSHSSTATFLASVSLTLCALIGAWIANNSSVFFQ-SQLIYGDTRPTTISIK 121
               A+  L++     T +A+  + LCA + A +++  S+    +  +YG     T+++K
Sbjct: 61  KNILAVQTLRNTIMGGTLMATTCILLCAGLAAVLSSTYSIKKPLNDAVYGAHGDFTVALK 120

Query: 122 YICLLICFLLAFSCFVQSARHFVHANYLISMP-----DSFVPVSS 161
           Y+ +L  FL AF     S R     N LI+ P     D F  + S
Sbjct: 121 YVTILTIFLFAFFSHSLSIRFINQVNILINAPQEPFSDDFGEIGS 165


>AT5G24790.1 | Symbols:  | Protein of unknown function, DUF599 |
           chr5:8512076-8513064 FORWARD LENGTH=246
          Length = 246

 Score = 80.9 bits (198), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 107/222 (48%), Gaps = 9/222 (4%)

Query: 3   MEFQREYLDLILVPSGLLIMFAYHLFLLYKYVNRPHTTVMGFENDDKRTWVAKIMQAENK 62
           ME+++ YLD ILVP  L++M  YH++L +     P +T++G  +  +R W++ +++   K
Sbjct: 1   MEWKKWYLDAILVPLALMMMICYHIYLSFMVRTNPFSTLLGINSHGRRIWISAMIKDNQK 60

Query: 63  DVKTALSVLQSHSSTATFLASVSLTLCALIGAWIANNSSVFFQ-SQLIYGDTRPTTISIK 121
               A+  L++    AT +A+  + LCA + A +++  S+    +  ++G      ISIK
Sbjct: 61  TNILAVQTLRNIVMGATLMATTCVLLCAGLAAVLSSTYSIKKPLNDAVFGAHGDFAISIK 120

Query: 122 YICLLICFLLAFSCFVQSARHFVHANYLISMPD--------SFVPVSSVQLAVVRGSDFW 173
           Y+ +L  F+ +F     S R       L+++P+         F+    V     +G    
Sbjct: 121 YLTILTIFIFSFFFHSLSIRFLNQVAILVNIPNLDPNPSGCVFLTSEHVSEMFEKGIFLN 180

Query: 174 SXXXXXXXXXXXXXXWFFGPMPMFVCSVAMVLVLHYLDSNSR 215
           +              W FGP+ +F   + MVLVL +LD  SR
Sbjct: 181 TVGNRLFYAGFSLMLWIFGPILVFFSVLVMVLVLSHLDFVSR 222


>AT5G43180.1 | Symbols:  | Protein of unknown function, DUF599 |
           chr5:17336425-17337816 REVERSE LENGTH=239
          Length = 239

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/225 (22%), Positives = 88/225 (39%), Gaps = 29/225 (12%)

Query: 11  DLILVPSGLLIMFAYHLFLLYKYVNRPHTTVMGFENDDKRTWVAKIMQAENKDVKTALSV 70
           D I+VP  LLI   YH+FL   + + P  T +G ++  +++W   I + ++K    A+  
Sbjct: 8   DSIVVPLSLLIAVGYHVFLWNTFKHNPSRTSLGIDSSKRKSWFRDIKEGDDKTGMLAVQS 67

Query: 71  LQSHSSTATFLASVSLTLCALIGAWIANNSSVFFQSQLI-------YGDTRPTTISIKY- 122
           L++        A++++ L  L  A + NN+  F  S LI       +G        +KY 
Sbjct: 68  LRNKKMVTILTATIAI-LIFLSLAAVTNNA--FKASHLITAADDIFFGSQNAKIFVLKYA 124

Query: 123 ----------------ICLLICFLLAFSCFVQSARHFVHANYLISMPDSFVPVSSVQLAV 166
                           +  L+  +   +   +         Y I+   SF   +  +L +
Sbjct: 125 SASLLLAASFFFSSIALSYLMDAIFLINAIAKKHEGDCDCAYDITGTSSFREYT--RLVL 182

Query: 167 VRGSDFWSXXXXXXXXXXXXXXWFFGPMPMFVCSVAMVLVLHYLD 211
            RG                   W FGP+P+   S+ +V VL+  D
Sbjct: 183 ERGFFMAMVGNRVMCVSIPLLLWMFGPLPVLASSLGLVWVLYQFD 227