Miyakogusa Predicted Gene

Lj6g3v2006390.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2006390.2 Non Chatacterized Hit- tr|G7IFH4|G7IFH4_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,79.33,0,
,CUFF.60459.2
         (614 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G28530.2 | Symbols:  | unknown protein; INVOLVED IN: biologic...   610   e-174
AT1G28530.1 | Symbols:  | unknown protein; INVOLVED IN: biologic...   605   e-173

>AT1G28530.2 | Symbols:  | unknown protein; INVOLVED IN:
           biological_process unknown; LOCATED IN: chloroplast;
           EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10
           growth stages; Has 20 Blast hits to 20 proteins in 6
           species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
           0; Plants - 20; Viruses - 0; Other Eukaryotes - 0
           (source: NCBI BLink). | chr1:10032127-10035496 REVERSE
           LENGTH=613
          Length = 613

 Score =  610 bits (1573), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 324/596 (54%), Positives = 419/596 (70%), Gaps = 15/596 (2%)

Query: 28  FSSTLHLTNSKGSISVLFCSSPKAIPVTEQQVLEAIADSDDKSLPCVRTYENDLSCLTLV 87
           F S   L   + S+S + C S  +   TE+ +L  +A+SD K+LPCVRTYEN+ + L+LV
Sbjct: 20  FKSIPLLPQQRSSVSFVRCFSKNS--STEEDILRFVAESDGKALPCVRTYENNSARLSLV 77

Query: 88  GAVDSQQAVTAAAADGGEVASEHIDAGLDAMVVETVFPGPSDDHSTVSTRLFLPARKVKE 147
           G V   QA+TAAAADGGE A +H+   +  MVVETVFPG SD  +TVSTRLFLP +KVKE
Sbjct: 78  GTVAFDQALTAAAADGGEAADDHLRENVPVMVVETVFPGGSDPKATVSTRLFLPTKKVKE 137

Query: 148 KAAKLRKTLSQDIFSGTTSKNVLAMTFRQVVLEQIWNFDLIVFRPGEERRIEDLEKPREV 207
           +A +LR++LS+D+ SG  SKN+LAMTFRQVVL Q+WNF L++F PG ER + D E PREV
Sbjct: 138 RAKRLRRSLSEDLSSGDLSKNILAMTFRQVVLRQLWNFQLVLFAPGAEREMGDFENPREV 197

Query: 208 PASFTLSTSDEYLISMLAEAVCASALQTTQRQFLDDLHGGNRSGFFKWFRKPERIESKDS 267
             SFTLS+SDE +IS++AE +C SALQ+T++ FLDD  G  +  F KW  K  RI S+D 
Sbjct: 198 STSFTLSSSDERVISVIAEVICISALQSTEKHFLDDYLGKAKFPFMKWLSKRRRIASRDC 257

Query: 268 TVILYKLFEDEMVENARSLLDNYNLMKDGFKHVNIKSGHFWWKPSSYKKLEKIGGSDFSA 327
           +V+L+KLF+DE  +N + LL+ Y   K+ FK  + K    WW  S+  KLEKIGG  FS+
Sbjct: 258 SVVLHKLFDDE--QNTKLLLEYYQSRKENFKLADTKQRSRWWDLSANSKLEKIGGPGFSS 315

Query: 328 WASEYVPAYRLEIDTKIMGDAKIDGWKKSAENRWEVLLTHSQMVGLAEMLDMYYVDPYTL 387
           WASEY+PAYRLE+D+ I+ D K++GW+KS+EN+WEVLLTHSQMVGLAE LD+Y+ D Y+L
Sbjct: 316 WASEYLPAYRLEMDSTILADLKLEGWRKSSENKWEVLLTHSQMVGLAEALDIYFEDTYSL 375

Query: 388 PDKELSCGVASKFANVSNRKGSASISKLLSVTLASGIFLVAISALGLF--PRLSKERKHT 445
           P K+L C V   +AN+ N K   S+ K +SVT+ASGIFL+A+SA   F  P+ S ERK+ 
Sbjct: 376 PRKQLPCDVPGNYANLPNEKKGLSLLKFISVTMASGIFLLAVSAAAQFCLPQKS-ERKYP 434

Query: 446 VEHRSLPSSEVNIAMHDLLDTTKLEEFCVSAVAKVKNAFGWSDEIKVEDGIGACIGEVPA 505
            + + +  SE  +  H   D+++L+ FC   V K+K+A+ W  EI +E  IGA IGEVP 
Sbjct: 435 GKRQEILWSESELLSHQSSDSSELDSFCGLLVNKLKDAYSWVGEITLESSIGAWIGEVPD 494

Query: 506 YLRGEGAAP-----LSTSS---EDTDAVAKVSMQDIASYQVVFSGEGKIVGFQPLSLVAV 557
           YL+    A      + TSS   E  +  AK S QDIA+YQVV S EGKI+GFQP S VAV
Sbjct: 495 YLKETSRAKSVEDHIVTSSSLLEILNEDAKASAQDIATYQVVLSSEGKIIGFQPTSRVAV 554

Query: 558 NQWATNPLARELYGGKKLTPGMVEPGLKIPLPEKVIVVELLMSVNQDAYFAMARPF 613
           N WA NPLARELYGGKKL PG++EPGLK   P+KV+V+ELLMSVN D  FA+ RP 
Sbjct: 555 NHWAANPLARELYGGKKLKPGLIEPGLKSHPPKKVVVLELLMSVNSDRPFALVRPL 610


>AT1G28530.1 | Symbols:  | unknown protein; INVOLVED IN:
           biological_process unknown; LOCATED IN: chloroplast;
           EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10
           growth stages; Has 20 Blast hits to 20 proteins in 6
           species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
           0; Plants - 20; Viruses - 0; Other Eukaryotes - 0
           (source: NCBI BLink). | chr1:10032127-10035496 REVERSE
           LENGTH=614
          Length = 614

 Score =  605 bits (1561), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 324/597 (54%), Positives = 419/597 (70%), Gaps = 16/597 (2%)

Query: 28  FSSTLHLTNSKGSISVLFCSSPKAIPVTEQQVLEAIADSDDKSLPCVRTYENDLSCLTLV 87
           F S   L   + S+S + C S  +   TE+ +L  +A+SD K+LPCVRTYEN+ + L+LV
Sbjct: 20  FKSIPLLPQQRSSVSFVRCFSKNS--STEEDILRFVAESDGKALPCVRTYENNSARLSLV 77

Query: 88  GAVDSQQAVTAAAADGGEVASEHIDAGLDAMVVETVFPGPSDDHSTVSTRLFLPARKVKE 147
           G V   QA+TAAAADGGE A +H+   +  MVVETVFPG SD  +TVSTRLFLP +KVKE
Sbjct: 78  GTVAFDQALTAAAADGGEAADDHLRENVPVMVVETVFPGGSDPKATVSTRLFLPTKKVKE 137

Query: 148 KAAKLRKTLSQDIFSGTTSKNVLAMTFRQVVLEQIWNFDLIVFRPGEERRIEDLEKPRE- 206
           +A +LR++LS+D+ SG  SKN+LAMTFRQVVL Q+WNF L++F PG ER + D E PRE 
Sbjct: 138 RAKRLRRSLSEDLSSGDLSKNILAMTFRQVVLRQLWNFQLVLFAPGAEREMGDFENPREQ 197

Query: 207 VPASFTLSTSDEYLISMLAEAVCASALQTTQRQFLDDLHGGNRSGFFKWFRKPERIESKD 266
           V  SFTLS+SDE +IS++AE +C SALQ+T++ FLDD  G  +  F KW  K  RI S+D
Sbjct: 198 VSTSFTLSSSDERVISVIAEVICISALQSTEKHFLDDYLGKAKFPFMKWLSKRRRIASRD 257

Query: 267 STVILYKLFEDEMVENARSLLDNYNLMKDGFKHVNIKSGHFWWKPSSYKKLEKIGGSDFS 326
            +V+L+KLF+DE  +N + LL+ Y   K+ FK  + K    WW  S+  KLEKIGG  FS
Sbjct: 258 CSVVLHKLFDDE--QNTKLLLEYYQSRKENFKLADTKQRSRWWDLSANSKLEKIGGPGFS 315

Query: 327 AWASEYVPAYRLEIDTKIMGDAKIDGWKKSAENRWEVLLTHSQMVGLAEMLDMYYVDPYT 386
           +WASEY+PAYRLE+D+ I+ D K++GW+KS+EN+WEVLLTHSQMVGLAE LD+Y+ D Y+
Sbjct: 316 SWASEYLPAYRLEMDSTILADLKLEGWRKSSENKWEVLLTHSQMVGLAEALDIYFEDTYS 375

Query: 387 LPDKELSCGVASKFANVSNRKGSASISKLLSVTLASGIFLVAISALGLF--PRLSKERKH 444
           LP K+L C V   +AN+ N K   S+ K +SVT+ASGIFL+A+SA   F  P+ S ERK+
Sbjct: 376 LPRKQLPCDVPGNYANLPNEKKGLSLLKFISVTMASGIFLLAVSAAAQFCLPQKS-ERKY 434

Query: 445 TVEHRSLPSSEVNIAMHDLLDTTKLEEFCVSAVAKVKNAFGWSDEIKVEDGIGACIGEVP 504
             + + +  SE  +  H   D+++L+ FC   V K+K+A+ W  EI +E  IGA IGEVP
Sbjct: 435 PGKRQEILWSESELLSHQSSDSSELDSFCGLLVNKLKDAYSWVGEITLESSIGAWIGEVP 494

Query: 505 AYLRGEGAAP-----LSTSS---EDTDAVAKVSMQDIASYQVVFSGEGKIVGFQPLSLVA 556
            YL+    A      + TSS   E  +  AK S QDIA+YQVV S EGKI+GFQP S VA
Sbjct: 495 DYLKETSRAKSVEDHIVTSSSLLEILNEDAKASAQDIATYQVVLSSEGKIIGFQPTSRVA 554

Query: 557 VNQWATNPLARELYGGKKLTPGMVEPGLKIPLPEKVIVVELLMSVNQDAYFAMARPF 613
           VN WA NPLARELYGGKKL PG++EPGLK   P+KV+V+ELLMSVN D  FA+ RP 
Sbjct: 555 VNHWAANPLARELYGGKKLKPGLIEPGLKSHPPKKVVVLELLMSVNSDRPFALVRPL 611