Miyakogusa Predicted Gene

Lj6g3v2006360.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2006360.1 Non Chatacterized Hit- tr|Q68Y36|Q68Y36_ORYSJ
Putative uncharacterized protein P0022D06.18 OS=Oryza
,55,2e-19,PP28,Casein kinase substrate, phosphoprotein PP28; 28 KDA
HEAT- AND ACID-STABLE PHOSPHOPROTEIN (PDGF,CUFF.60467.1
         (163 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G46020.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Casein kin...   162   1e-40

>AT5G46020.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Casein kinase
           substrate, phosphoprotein PP28 (InterPro:IPR019380); Has
           30201 Blast hits to 17322 proteins in 780 species:
           Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
           3422; Plants - 5037; Viruses - 0; Other Eukaryotes -
           2996 (source: NCBI BLink). | chr5:18663075-18664629
           REVERSE LENGTH=164
          Length = 164

 Score =  162 bits (409), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 85/137 (62%), Positives = 100/137 (72%), Gaps = 1/137 (0%)

Query: 1   MGRGKFKAKPTGRRQFSTPEDMLAGTSN-RPKSFRQKEAXXXXXXXXXXXXXXXXXXXXX 59
           MGRGKFK KPTG+R+FS+  D+LAGTS  RP+SF+QKEA                     
Sbjct: 1   MGRGKFKGKPTGQRRFSSAADILAGTSAARPRSFKQKEAEYEEDVEEESEEESEEESEDE 60

Query: 60  XTKKNKGTQGIIEIENPNLVKPKNVKARDVDIEKTTELSRREREEIEKQRAHERYMRLQE 119
              K KG + +IE++NPN V+ K +KA+D+D  KTTELSRREREE+EKQRAHERYMRLQE
Sbjct: 61  ADVKKKGAEAVIEVDNPNRVRQKTLKAKDLDASKTTELSRREREELEKQRAHERYMRLQE 120

Query: 120 QGKTEQARKDLDRLALI 136
           QGKTEQARKDLDRLALI
Sbjct: 121 QGKTEQARKDLDRLALI 137