Miyakogusa Predicted Gene

Lj6g3v2006180.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2006180.1 tr|I1MEP2|I1MEP2_SOYBN D-tyrosyl-tRNA(Tyr)
deacylase OS=Glycine max PE=3 SV=1,91.25,0,DTD-like,D-Tyr tRNAtyr
deacylase-like domain; no description,D-Tyr tRNAtyr deacylase-like
domain; se,CUFF.60442.1
         (205 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G18460.1 | Symbols:  | D-Tyr-tRNA(Tyr) deacylase family prote...   238   2e-63

>AT4G18460.1 | Symbols:  | D-Tyr-tRNA(Tyr) deacylase family protein
           | chr4:10195763-10196679 REVERSE LENGTH=153
          Length = 153

 Score =  238 bits (606), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 110/133 (82%), Positives = 120/133 (90%)

Query: 61  DGRVVSEIGPGLLVLVGIHDSDGTIDADYICRKVLNMRLFPNETTGKAWDMSVMQKNYQV 120
           DGR+VSEIGPGLLVL+GIH+SD   DADYICRKVLNMRLF NETTGK WD +VMQ+NY V
Sbjct: 16  DGRIVSEIGPGLLVLIGIHESDTESDADYICRKVLNMRLFSNETTGKGWDQNVMQRNYGV 75

Query: 121 LLVSQFTLYGILKGNKPDFHVAMAPQRAKPFYASLVDMFRNAYNPDAIKDGVFGAKMKVN 180
           LLVSQFTLYG LKGNKPDFHVAM P +AKPFYASLV+ F+ AYNPDA+KDGVFGA M+VN
Sbjct: 76  LLVSQFTLYGFLKGNKPDFHVAMPPDKAKPFYASLVEKFQKAYNPDAVKDGVFGAMMQVN 135

Query: 181 LVNDGPVTMQLDS 193
           LVNDGPVTMQLDS
Sbjct: 136 LVNDGPVTMQLDS 148