Miyakogusa Predicted Gene
- Lj6g3v1995970.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1995970.1 tr|Q5W965|Q5W965_9BRYO PpPPR_91 protein
OS=Physcomitrella patens GN=PpPPR_91 PE=2 SV=1,29.88,2e-18,no
description,Tetratricopeptide-like helical; PENTATRICOPEPTIDE (PPR)
REPEAT-CONTAINING PROTEIN,NUL,CUFF.60521.1
(525 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 650 0.0
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 313 3e-85
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 305 4e-83
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 5e-80
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 292 4e-79
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 291 7e-79
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 289 3e-78
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 7e-78
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 1e-77
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 285 8e-77
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 1e-76
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 3e-76
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 282 5e-76
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 281 6e-76
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 280 2e-75
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 2e-75
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 2e-75
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 4e-75
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 4e-75
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 4e-75
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 278 5e-75
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 278 9e-75
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 4e-74
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 5e-74
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 275 6e-74
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 8e-74
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 274 1e-73
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 1e-73
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 273 1e-73
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 2e-73
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 2e-73
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 6e-73
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 271 9e-73
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 9e-73
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 270 1e-72
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 2e-72
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 270 2e-72
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 269 4e-72
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 268 6e-72
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 8e-72
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 1e-71
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 267 1e-71
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 2e-71
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 265 4e-71
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 1e-70
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 264 1e-70
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 2e-70
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 2e-70
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 262 5e-70
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 261 8e-70
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 8e-70
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 261 9e-70
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 4e-69
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 4e-69
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 6e-69
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 6e-69
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 7e-69
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 1e-68
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 255 4e-68
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 8e-68
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 2e-67
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 252 4e-67
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 6e-67
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 251 9e-67
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 250 1e-66
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 2e-66
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 2e-66
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 2e-66
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 249 3e-66
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 249 4e-66
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 5e-66
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 6e-66
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 248 6e-66
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 248 7e-66
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 8e-66
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 9e-66
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 3e-65
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 246 3e-65
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 4e-65
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 6e-65
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 8e-65
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 2e-64
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 2e-64
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 2e-64
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 3e-64
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 3e-64
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 4e-64
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 7e-64
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 9e-64
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 3e-63
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 1e-62
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 2e-62
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 2e-62
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 2e-62
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 2e-62
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 2e-62
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 3e-62
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 236 4e-62
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 235 5e-62
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 7e-62
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 233 2e-61
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 233 2e-61
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 2e-61
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 3e-61
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 4e-61
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 7e-61
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 8e-61
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 231 8e-61
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 231 8e-61
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 230 2e-60
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 230 2e-60
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 2e-60
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 4e-60
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 6e-60
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 7e-60
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 228 8e-60
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 228 1e-59
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 2e-59
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 4e-59
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 4e-59
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 225 5e-59
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 6e-59
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 8e-59
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 9e-59
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 224 1e-58
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 224 1e-58
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 1e-58
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 2e-58
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 223 2e-58
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 2e-58
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 223 2e-58
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 7e-58
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 8e-58
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 9e-58
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 2e-57
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 220 2e-57
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 2e-57
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 220 2e-57
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 2e-57
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 219 3e-57
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 4e-57
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 1e-56
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 2e-56
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 217 2e-56
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 1e-55
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 2e-55
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 4e-55
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 5e-55
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 6e-55
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 6e-55
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 209 5e-54
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 209 5e-54
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 6e-54
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 7e-54
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 1e-53
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 2e-53
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 3e-53
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 4e-53
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 205 5e-53
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 6e-53
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 7e-53
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 8e-53
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 203 2e-52
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 203 2e-52
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 4e-51
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 1e-50
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 2e-50
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 5e-50
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 6e-50
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 9e-49
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 1e-48
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 6e-48
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 6e-48
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 1e-47
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 3e-47
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 7e-47
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 185 8e-47
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 167 1e-41
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 6e-41
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 1e-40
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 3e-36
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 1e-35
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 146 3e-35
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 3e-35
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 2e-34
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 3e-34
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 2e-30
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 127 1e-29
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 1e-26
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 7e-23
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 101 1e-21
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 9e-20
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 2e-19
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 5e-19
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 9e-19
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 9e-18
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 1e-17
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 3e-17
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 3e-17
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 87 4e-17
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 4e-17
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 86 6e-17
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 7e-17
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 85 1e-16
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 1e-16
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 4e-16
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 9e-16
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 80 4e-15
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 80 5e-15
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 79 5e-15
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 8e-15
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 8e-15
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 1e-14
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 78 2e-14
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 77 3e-14
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 5e-14
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 74 2e-13
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 73 5e-13
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 72 1e-12
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 1e-12
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 5e-12
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 69 8e-12
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 69 1e-11
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 68 2e-11
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 67 2e-11
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 67 3e-11
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 4e-10
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 62 7e-10
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 62 9e-10
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 60 4e-09
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 5e-09
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 55 2e-07
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 55 2e-07
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 5e-07
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 52 8e-07
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 9e-07
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 50 5e-06
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 50 5e-06
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/516 (60%), Positives = 397/516 (76%), Gaps = 7/516 (1%)
Query: 10 FSSRALFSPHQ---PFLQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPN 66
S R L S H P QN + + ++ LQ +INS P +G+ IH+ I+KTGF P+
Sbjct: 9 ISPRILPSNHYSTFPLKQNVSSLSPAKYIAGALQEHINSPAPKAGKKIHADIIKTGFQPD 68
Query: 67 TNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLV 126
NISIKLL+L+LKC CL YARQVFD+L TLSAYNYMI YLK G V+E L LV+R+
Sbjct: 69 LNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSY 128
Query: 127 SGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSY 186
SGEK DG+T SM+LKAS S + P L R+VH +I+K DV++ DDVL TAL D+Y
Sbjct: 129 SGEKADGYTLSMVLKASNSRGSTMILPRS-LCRLVHARIIKCDVEL--DDVLITALVDTY 185
Query: 187 VKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIE 246
VK+G++ ARTVF+ M ++NV+ TS+ISGYMNQG +DAE IF T KDIVV+NAM+E
Sbjct: 186 VKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVE 245
Query: 247 GYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFF 306
G+S++ E A RS+++YI MQR F PNISTFAS+IGACS++ + EVGQQV +Q+MK+ +
Sbjct: 246 GFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVY 305
Query: 307 GHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKM 366
HIK+GS+L+DMY+KCG + D+RRVFD M +KNVFSWTSMIDGYGKNG P+EALELF +M
Sbjct: 306 THIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRM 365
Query: 367 QIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAG 426
+ E+ + PN+VTFL ALSAC+H+GLVDKG EIF+SM+ +Y +KP+MEHYAC+VDL+GRAG
Sbjct: 366 K-EFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAG 424
Query: 427 RLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALS 486
LN+A+EF MPERP+SD+WAALLSSC LHGN E+A +AASELFKLNA+ RPGAY+ALS
Sbjct: 425 DLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALS 484
Query: 487 NTLAAAEKWDSVSELREVMKERGISKDTACSWVGAD 522
N A+ +KWD+VS++REVMK R ISK SW D
Sbjct: 485 NVYASNDKWDNVSKIREVMKRRRISKTIGRSWTSED 520
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 313 bits (801), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 172/484 (35%), Positives = 279/484 (57%), Gaps = 19/484 (3%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G +HS I K+ F+ + I L+ +Y KC + A++VFD++ D+ + ++N +I + +
Sbjct: 171 GVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQ 230
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
G E+L + + +L S + D T + ++ A S S V G+ VH +++K D
Sbjct: 231 NGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKV------GQEVHGRVVKND- 283
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
+ D +L A D Y K RI AR +FD M +NVI+ TS+ISGY K A +F
Sbjct: 284 KLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMF 343
Query: 231 QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAF 290
K ++++V +NA+I GY++ E +L ++ ++R + P +FA+I+ AC+ +A
Sbjct: 344 TKMAERNVVSWNALIAGYTQNGE-NEEALSLFCLLKRESVCPTHYSFANILKACADLAEL 402
Query: 291 EVGQQVQSQLMKTPFF------GHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWT 344
+G Q ++K F I +G++LIDMY KCG V + VF M +++ SW
Sbjct: 403 HLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWN 462
Query: 345 SMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMEN 404
+MI G+ +NG+ +EALELF++M +E G P+ +T + LSAC HAG V++G F SM
Sbjct: 463 AMIIGFAQNGYGNEALELFREM-LESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTR 521
Query: 405 EYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAK 464
++ V P +HY C+VDLLGRAG L +A + MP +P+S +W +LL++C++H N + K
Sbjct: 522 DFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGK 581
Query: 465 LAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV---GA 521
A +L ++ + G YV LSN A KW+ V +R+ M++ G++K CSW+ G
Sbjct: 582 YVAEKLLEVEPSN-SGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGH 640
Query: 522 DSVY 525
D V+
Sbjct: 641 DHVF 644
Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 170/316 (53%), Gaps = 5/316 (1%)
Query: 159 RIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYM 218
R VH ++K+ E + L D+Y K G + R VFD M ++N+ + S+++G
Sbjct: 40 RYVHASVIKSGFSNEI--FIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLT 97
Query: 219 NQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFA 278
G +A+ +F+ ++D +N+M+ G+++ C +L + M + F N +FA
Sbjct: 98 KLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRC-EEALCYFAMMHKEGFVLNEYSFA 156
Query: 279 SIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQK 338
S++ ACS + G QV S + K+PF + +GSAL+DMYSKCG V D++RVFD M +
Sbjct: 157 SVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDR 216
Query: 339 NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEI 398
NV SW S+I + +NG EAL++FQ M +E V P+ VT S +SACA + G E+
Sbjct: 217 NVVSWNSLITCFEQNGPAVEALDVFQ-MMLESRVEPDEVTLASVISACASLSAIKVGQEV 275
Query: 399 FQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHG 458
+ K++ + VD+ + R+ +A MP R N +++S +
Sbjct: 276 HGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR-NVIAETSMISGYAMAA 334
Query: 459 NTEMAKLAASELFKLN 474
+T+ A+L +++ + N
Sbjct: 335 STKAARLMFTKMAERN 350
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 199/466 (42%), Gaps = 110/466 (23%)
Query: 54 IHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQ 113
+H+ ++K+GF I +L+ Y KC L RQVFD + + + +N ++ K G
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 114 VEESLGLVRRL----------LVSGEK---------------------LDGFTFSMILKA 142
++E+ L R + +VSG L+ ++F+ +L A
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 143 STSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVM 202
+ L D+ + V V L A D + +AL D Y K G + A+ VFD M
Sbjct: 162 CSG--------LNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEM 213
Query: 203 SEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVY 262
++NV+S SLI+ + G A +L+V+
Sbjct: 214 GDRNVVSWNSLITCFEQNGP--------------------------------AVEALDVF 241
Query: 263 IDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKT-PFFGHIKLGSALIDMYSK 321
M P+ T AS+I AC+ ++A +VGQ+V +++K I L +A +DMY+K
Sbjct: 242 QMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAK 301
Query: 322 CGRVVDSRRVFD-------------------------------HMHQKNVFSWTSMIDGY 350
C R+ ++R +FD M ++NV SW ++I GY
Sbjct: 302 CSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGY 361
Query: 351 GKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEI-FQSMENEYKVK 409
+NG +EAL LF ++ E V P +F + L ACA + G++ +++ +K +
Sbjct: 362 TQNGENEEALSLFCLLKRE-SVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQ 420
Query: 410 PRMEHYACV----VDLLGRAGRLNQAWEFVMRMPERPNSDVWAALL 451
E V +D+ + G + + + +M ER + W A++
Sbjct: 421 SGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER-DCVSWNAMI 465
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 35/216 (16%)
Query: 275 STFASIIGAC--SMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVF 332
S FA ++ +C S ++A V + V + ++K+ F I + + LID YSKCG + D R+VF
Sbjct: 20 SPFAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVF 78
Query: 333 DHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKM----QIEY------------------ 370
D M Q+N+++W S++ G K GF DEA LF+ M Q +
Sbjct: 79 DKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALC 138
Query: 371 --------GVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLL 422
G V N +F S LSAC+ ++KG+++ S+ + + + +VD+
Sbjct: 139 YFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQV-HSLIAKSPFLSDVYIGSALVDMY 197
Query: 423 GRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHG 458
+ G +N A M +R N W +L++ +G
Sbjct: 198 SKCGNVNDAQRVFDEMGDR-NVVSWNSLITCFEQNG 232
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 305 bits (782), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 176/535 (32%), Positives = 302/535 (56%), Gaps = 51/535 (9%)
Query: 23 LQNHDFVPHSTLLSNTLQ-YYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKC- 80
+++ F P + ++ L + +D H+ LK+G T++S L+ +Y KC
Sbjct: 139 MKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCA 198
Query: 81 ---NCLRYARQVFDDLRDK--------------------------------TLSAYNYMI 105
+ L AR+VFD++ +K L AYN MI
Sbjct: 199 SSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMI 258
Query: 106 GAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQI 165
Y+ +G +E+L +VRR++ SG +LD FT+ +++A + A L LG+ VH +
Sbjct: 259 SGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACAT------AGLLQLGKQVHAYV 312
Query: 166 LK-ADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFK 224
L+ D D+ +L Y K G+ AR +F+ M K+++S +L+SGY++ G
Sbjct: 313 LRREDFSFHFDN----SLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIG 368
Query: 225 DAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGAC 284
+A+ IF++ +K+I+ + MI G ++ L+++ M+R F P F+ I +C
Sbjct: 369 EAKLIFKEMKEKNILSWMIMISGLAENG-FGEEGLKLFSCMKREGFEPCDYAFSGAIKSC 427
Query: 285 SMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWT 344
+++ A+ GQQ +QL+K F + G+ALI MY+KCG V ++R+VF M + SW
Sbjct: 428 AVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWN 487
Query: 345 SMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMEN 404
++I G++G EA++++++M ++ G+ P+ +T L+ L+AC+HAGLVD+G + F SME
Sbjct: 488 ALIAALGQHGHGAEAVDVYEEM-LKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMET 546
Query: 405 EYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAK 464
Y++ P +HYA ++DLL R+G+ + A + +P +P +++W ALLS CR+HGN E+
Sbjct: 547 VYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGI 606
Query: 465 LAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
+AA +LF L G Y+ LSN AA +W+ V+ +R++M++RG+ K+ ACSW+
Sbjct: 607 IAADKLFGLIPE-HDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWI 660
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 179/389 (46%), Gaps = 44/389 (11%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
+ +H +I+ GF P +I +L+ +Y K + L YARQ+FD++ + A M+ Y
Sbjct: 33 ARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCA 92
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVH-------- 162
G + + G+ + V + +MI S + G + L ++ H
Sbjct: 93 SGDITLARGVFEKAPVCMRDTVMYN-AMITGFSHNNDGYSAINL--FCKMKHEGFKPDNF 149
Query: 163 --VQILKADVDVEKDDVLCTALTDSYVKNGR-----------------------IAYART 197
+L V D+ C + +K+G + AR
Sbjct: 150 TFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARK 209
Query: 198 VFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDK-DIVVFNAMIEGYSKTSECAT 256
VFD + EK+ S T++++GY+ G F E + + D +V +NAMI GY
Sbjct: 210 VFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRG-FYQ 268
Query: 257 RSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALI 316
+LE+ M + T+ S+I AC+ ++G+QV + +++ F ++L+
Sbjct: 269 EALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFS-FHFDNSLV 327
Query: 317 DMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNF 376
+Y KCG+ ++R +F+ M K++ SW +++ GY +G EA +F++M+ + N
Sbjct: 328 SLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEK-----NI 382
Query: 377 VTFLSALSACAHAGLVDKGLEIFQSMENE 405
++++ +S A G ++GL++F M+ E
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKRE 411
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 295 bits (755), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 172/476 (36%), Positives = 276/476 (57%), Gaps = 20/476 (4%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQ 111
+ +H+H L+TG ++ +LL++ L YAR++FD ++ YN +I AY
Sbjct: 5 KQLHAHCLRTGVDETKDLLQRLLLI----PNLVYARKLFDHHQNSCTFLYNKLIQAYYVH 60
Query: 112 GQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVD 171
Q ES+ L L G + TF+ I AS S S PL R++H Q ++
Sbjct: 61 HQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSAR--PL----RLLHSQFFRSGF- 113
Query: 172 VEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQ 231
E D CT L +Y K G + AR VFD MS+++V ++I+GY +G K A +F
Sbjct: 114 -ESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFD 172
Query: 232 KTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQR-LNFRPNISTFASIIGACSMVAAF 290
K++ + +I G+S+ + +L++++ M++ + +PN T S++ AC+ +
Sbjct: 173 SMPRKNVTSWTTVISGFSQNGN-YSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGEL 231
Query: 291 EVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHM-HQKNVFSWTSMIDG 349
E+G++++ + FF +I + +A I+MYSKCG + ++R+F+ + +Q+N+ SW SMI
Sbjct: 232 EIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGS 291
Query: 350 YGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVK 409
+G DEAL LF +M E G P+ VTF+ L AC H G+V KG E+F+SME +K+
Sbjct: 292 LATHGKHDEALTLFAQMLRE-GEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKIS 350
Query: 410 PRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASE 469
P++EHY C++DLLGR G+L +A++ + MP +P++ VW LL +C HGN E+A++A+
Sbjct: 351 PKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEA 410
Query: 470 LFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSW---VGAD 522
LFKL PG V +SN AA EKWD V +R++MK+ ++K S+ VG D
Sbjct: 411 LFKLEPTN-PGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVD 465
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDL-RDKTLSAYNYMIGAYL 109
G+ + + + GF N + + +Y KC + A+++F++L + L ++N MIG+
Sbjct: 234 GRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLA 293
Query: 110 KQGQVEESLGLVRRLLVSGEKLDGFTFSMILKA 142
G+ +E+L L ++L GEK D TF +L A
Sbjct: 294 THGKHDEALTLFAQMLREGEKPDAVTFVGLLLA 326
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 292 bits (748), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 166/519 (31%), Positives = 276/519 (53%), Gaps = 52/519 (10%)
Query: 2 NNGILRPFFSSRALFSPHQPFLQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKT 61
+NG L+ A+ P F +D + ++ L L+ GQ +H+H++KT
Sbjct: 32 SNGRLQEALLEMAMLGPEMGF-HGYDALLNACLDKRALR---------DGQRVHAHMIKT 81
Query: 62 GFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLV 121
++P T + +LL+ Y KC+CL AR+V D++ +K + ++ MI Y + G E+L +
Sbjct: 82 RYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVF 141
Query: 122 RRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTA 181
++ S K + FTF+ +L + SG LG LG+ +H I+K + D
Sbjct: 142 AEMMRSDGKPNEFTFATVLTSCIRASG-----LG-LGKQIHGLIVKWNYD---------- 185
Query: 182 LTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVF 241
++ +SL+ Y G K+A IF+ ++D+V
Sbjct: 186 -----------------------SHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSC 222
Query: 242 NAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLM 301
A+I GY++ +LE++ + PN T+AS++ A S +A + G+Q ++
Sbjct: 223 TAIIAGYAQLG-LDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVL 281
Query: 302 KTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALE 361
+ + L ++LIDMYSKCG + +RR+FD+M ++ SW +M+ GY K+G E LE
Sbjct: 282 RRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLE 341
Query: 362 LFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSM-ENEYKVKPRMEHYACVVD 420
LF+ M+ E V P+ VT L+ LS C+H + D GL IF M EY KP EHY C+VD
Sbjct: 342 LFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVD 401
Query: 421 LLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPG 480
+LGRAGR+++A+EF+ RMP +P + V +LL +CR+H + ++ + L ++ G
Sbjct: 402 MLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPEN-AG 460
Query: 481 AYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
YV LSN A+A +W V+ +R +M ++ ++K+ SW+
Sbjct: 461 NYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWI 499
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 291 bits (745), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 165/477 (34%), Positives = 271/477 (56%), Gaps = 12/477 (2%)
Query: 49 SSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAY 108
S GQ++H +K+ + ++ L+ Y C L A +VF +++K + ++N MI +
Sbjct: 148 SLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGF 207
Query: 109 LKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKA 168
+++G +++L L +++ K T +L A RN+ + GR V I +
Sbjct: 208 VQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKI--RNL----EFGRQVCSYIEEN 261
Query: 169 DVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAEC 228
V+V + L A+ D Y K G I A+ +FD M EK+ ++ T+++ GY ++ A
Sbjct: 262 RVNV--NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAARE 319
Query: 229 IFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQ-RLNFRPNISTFASIIGACSMV 287
+ KDIV +NA+I Y + + +L V+ ++Q + N + N T S + AC+ V
Sbjct: 320 VLNSMPQKDIVAWNALISAYEQNGK-PNEALIVFHELQLQKNMKLNQITLVSTLSACAQV 378
Query: 288 AAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMI 347
A E+G+ + S + K + + SALI MYSKCG + SR VF+ + +++VF W++MI
Sbjct: 379 GALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMI 438
Query: 348 DGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYK 407
G +G +EA+++F KMQ E V PN VTF + AC+H GLVD+ +F ME+ Y
Sbjct: 439 GGLAMHGCGNEAVDMFYKMQ-EANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYG 497
Query: 408 VKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAA 467
+ P +HYAC+VD+LGR+G L +A +F+ MP P++ VW ALL +C++H N +A++A
Sbjct: 498 IVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMAC 557
Query: 468 SELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWVGADSV 524
+ L +L GA+V LSN A KW++VSELR+ M+ G+ K+ CS + D +
Sbjct: 558 TRLLELEPRN-DGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGM 613
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/484 (24%), Positives = 218/484 (45%), Gaps = 81/484 (16%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLKCN--CLRYARQVFDDLRDKTLSAYNYMIGAYL 109
+ H H+++TG + + KL + + L YAR+VFD++ A+N +I AY
Sbjct: 47 KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYA 106
Query: 110 KQGQVEESLGLVRRLLVSGEKL-DGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKA 168
S+ ++ + + +TF ++KA+ S + LG+ +H +K+
Sbjct: 107 SGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLS------LGQSLHGMAVKS 160
Query: 169 DVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAEC 228
V D + +L Y G + A VF + EK+V+S S+I+G++ +G
Sbjct: 161 AVG--SDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKG------- 211
Query: 229 IFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVA 288
+ DK +LE++ M+ + + + T ++ AC+ +
Sbjct: 212 ----SPDK---------------------ALELFKKMESEDVKASHVTMVGVLSACAKIR 246
Query: 289 AFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMID 348
E G+QV S + + ++ L +A++DMY+KCG + D++R+FD M +K+ +WT+M+D
Sbjct: 247 NLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLD 306
Query: 349 GYG-------------------------------KNGFPDEALELFQKMQIEYGVVPNFV 377
GY +NG P+EAL +F ++Q++ + N +
Sbjct: 307 GYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQI 366
Query: 378 TFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMR 437
T +S LSACA G ++ G I S ++ ++ + ++ + + G L ++ E V
Sbjct: 367 TLVSTLSACAQVGALELGRWI-HSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSRE-VFN 424
Query: 438 MPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLN-ANGRPGAYVALSNTLAAAEKWD 496
E+ + VW+A++ +HG A +K+ AN +P V +N A
Sbjct: 425 SVEKRDVFVWSAMIGGLAMHG---CGNEAVDMFYKMQEANVKPNG-VTFTNVFCACSHTG 480
Query: 497 SVSE 500
V E
Sbjct: 481 LVDE 484
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 147/312 (47%), Gaps = 30/312 (9%)
Query: 226 AECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDM-QRLNFRPNISTFASIIGAC 284
A +F + + +N +I Y+ + S+ ++DM PN TF +I A
Sbjct: 83 ARKVFDEIPKPNSFAWNTLIRAYASGPD-PVLSIWAFLDMVSESQCYPNKYTFPFLIKAA 141
Query: 285 SMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWT 344
+ V++ +GQ + +K+ + + ++LI Y CG + + +VF + +K+V SW
Sbjct: 142 AEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWN 201
Query: 345 SMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMEN 404
SMI+G+ + G PD+ALELF+KM+ E V + VT + LSACA ++ G ++ +E
Sbjct: 202 SMINGFVQKGSPDKALELFKKMESE-DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIE- 259
Query: 405 EYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAK 464
E +V + ++D+ + G + A M E+ N W +L + + E A+
Sbjct: 260 ENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNV-TWTTMLDGYAISEDYEAAR 318
Query: 465 -----LAASELFKLNA-------NGRPGAYVALSNTLAAAEKWDSVSELREVMKERGI-- 510
+ ++ NA NG+P + + + L +L++ MK I
Sbjct: 319 EVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHEL----------QLQKNMKLNQITL 368
Query: 511 -SKDTACSWVGA 521
S +AC+ VGA
Sbjct: 369 VSTLSACAQVGA 380
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 289 bits (740), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 164/469 (34%), Positives = 263/469 (56%), Gaps = 14/469 (2%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLKCNC---LRYARQVFDDLRDKTLSAYNYMIGAY 108
+ IH+ +LKTG + ++ K L + L YA+ VFD +N MI +
Sbjct: 31 KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGF 90
Query: 109 LKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKA 168
+ E SL L +R+L S + +TF +LKA + N++ + +I H QI K
Sbjct: 91 SCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACS-----NLSAFEETTQI-HAQITK- 143
Query: 169 DVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAEC 228
+ E D +L +SY G A +FD + E + +S S+I GY+ G A
Sbjct: 144 -LGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALT 202
Query: 229 IFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVA 288
+F+K +K+ + + MI GY + ++ +L+++ +MQ + P+ + A+ + AC+ +
Sbjct: 203 LFRKMAEKNAISWTTMISGYVQ-ADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLG 261
Query: 289 AFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMID 348
A E G+ + S L KT LG LIDMY+KCG + ++ VF ++ +K+V +WT++I
Sbjct: 262 ALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALIS 321
Query: 349 GYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKV 408
GY +G EA+ F +MQ + G+ PN +TF + L+AC++ GLV++G IF SME +Y +
Sbjct: 322 GYAYHGHGREAISKFMEMQ-KMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNL 380
Query: 409 KPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAAS 468
KP +EHY C+VDLLGRAG L++A F+ MP +PN+ +W ALL +CR+H N E+ +
Sbjct: 381 KPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGE 440
Query: 469 ELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACS 517
L ++ G YV +N A +KWD +E R +MKE+G++K CS
Sbjct: 441 ILIAIDPY-HGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCS 488
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 2/146 (1%)
Query: 1 MNNGILRPFFSSRALFSPHQPFLQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILK 60
M +G ++ + AL H+ +QN D P + L+N L G+ IHS++ K
Sbjct: 218 MISGYVQADMNKEALQLFHE--MQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNK 275
Query: 61 TGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGL 120
T ++ + L+ +Y KC + A +VF +++ K++ A+ +I Y G E++
Sbjct: 276 TRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISK 335
Query: 121 VRRLLVSGEKLDGFTFSMILKASTST 146
+ G K + TF+ +L A + T
Sbjct: 336 FMEMQKMGIKPNVITFTAVLTACSYT 361
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 288 bits (736), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 172/477 (36%), Positives = 259/477 (54%), Gaps = 24/477 (5%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLKCNCLR--YARQVFDDLRDKTLSAYNYMIGAYL 109
+ IH H+L+ G + I KL+ K YAR+V + ++ + + +I Y
Sbjct: 66 KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYA 125
Query: 110 KQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKAD 169
+G+ +E++ + + FTFS +LKA + N LGR H Q +
Sbjct: 126 IEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLN------LGRQFHAQTFRLR 179
Query: 170 VDVEKDDVLC-----TALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFK 224
C + D YVK I AR VFD M E++VIS T LI+ Y G +
Sbjct: 180 G-------FCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNME 232
Query: 225 DAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGAC 284
A +F+ KD+V + AM+ G+++ ++ +LE + M++ R + T A I AC
Sbjct: 233 CAAELFESLPTKDMVAWTAMVTGFAQNAK-PQEALEYFDRMEKSGIRADEVTVAGYISAC 291
Query: 285 SMVAAFEVGQQVQSQLMKTPFF--GHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFS 342
+ + A + + K+ + H+ +GSALIDMYSKCG V ++ VF M+ KNVF+
Sbjct: 292 AQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFT 351
Query: 343 WTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSM 402
++SMI G +G EAL LF M + + PN VTF+ AL AC+H+GLVD+G ++F SM
Sbjct: 352 YSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSM 411
Query: 403 ENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEM 462
+ V+P +HY C+VDLLGR GRL +A E + M P+ VW ALL +CR+H N E+
Sbjct: 412 YQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEI 471
Query: 463 AKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
A++AA LF+L + G Y+ LSN A+A W V +R+++KE+G+ K A SWV
Sbjct: 472 AEIAAEHLFELEPD-IIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWV 527
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 181/554 (32%), Positives = 291/554 (52%), Gaps = 54/554 (9%)
Query: 10 FSSRALFSPHQPFLQNHDFVPHST--LLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNT 67
F SR + S P L+ P T LL L Y + T +T+HS I+ N+
Sbjct: 19 FQSRKV-SSSLPKLELDQKSPQETVFLLGQVLDTYPDIRTL---RTVHSRIILEDLRCNS 74
Query: 68 NISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVS 127
++ +KL+ Y + AR+VFD++ ++ + N MI +Y+ G E + + +
Sbjct: 75 SLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGC 134
Query: 128 GEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYV 187
+ D +TF +LKA S SG V +GR +H K V + + L Y
Sbjct: 135 NVRPDHYTFPCVLKA-CSCSGTIV-----IGRKIHGSATK--VGLSSTLFVGNGLVSMYG 186
Query: 188 KNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDA--------------------- 226
K G ++ AR V D MS ++V+S SL+ GY F DA
Sbjct: 187 KCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMAS 246
Query: 227 ----------------ECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNF 270
+ +F K K +V +N MI Y K + ++E+Y M+ F
Sbjct: 247 LLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNA-MPVEAVELYSRMEADGF 305
Query: 271 RPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRR 330
P+ + S++ AC +A +G+++ + + ++ L +ALIDMY+KCG + +R
Sbjct: 306 EPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARD 365
Query: 331 VFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAG 390
VF++M ++V SWT+MI YG +G +A+ LF K+Q + G+VP+ + F++ L+AC+HAG
Sbjct: 366 VFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQ-DSGLVPDSIAFVTTLAACSHAG 424
Query: 391 LVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAAL 450
L+++G F+ M + YK+ PR+EH AC+VDLLGRAG++ +A+ F+ M PN VW AL
Sbjct: 425 LLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGAL 484
Query: 451 LSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGI 510
L +CR+H +T++ LAA +LF+L A + G YV LSN A A +W+ V+ +R +MK +G+
Sbjct: 485 LGACRVHSDTDIGLLAADKLFQL-APEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGL 543
Query: 511 SKDTACSWVGADSV 524
K+ S V + +
Sbjct: 544 KKNPGASNVEVNRI 557
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 285 bits (728), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 164/473 (34%), Positives = 261/473 (55%), Gaps = 49/473 (10%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLR--DKTLSAYNYMIGAY 108
G+ +H+ + + GF + + L+ LY KC L AR VF+ L ++T+ ++ ++ AY
Sbjct: 138 GRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAY 197
Query: 109 LKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDL--GRIVHVQIL 166
+ G+ E+L + ++ K D +L A T L DL GR +H ++
Sbjct: 198 AQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTC--------LQDLKQGRSIHASVV 249
Query: 167 KADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDA 226
K +++E D L +L Y K G++A A+ +FD M N
Sbjct: 250 KMGLEIEPD--LLISLNTMYAKCGQVATAKILFDKMKSPN-------------------- 287
Query: 227 ECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSM 286
++++NAMI GY+K A +++++ +M + RP+ + S I AC+
Sbjct: 288 -----------LILWNAMISGYAKNGY-AREAIDMFHEMINKDVRPDTISITSAISACAQ 335
Query: 287 VAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSM 346
V + E + + + ++ + + + SALIDM++KCG V +R VFD ++V W++M
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 395
Query: 347 IDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEY 406
I GYG +G EA+ L++ M+ GV PN VTFL L AC H+G+V +G F M ++
Sbjct: 396 IVGYGLHGRAREAISLYRAME-RGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DH 453
Query: 407 KVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLA 466
K+ P+ +HYACV+DLLGRAG L+QA+E + MP +P VW ALLS+C+ H + E+ + A
Sbjct: 454 KINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYA 513
Query: 467 ASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
A +LF ++ + G YV LSN AAA WD V+E+R MKE+G++KD CSWV
Sbjct: 514 AQQLFSIDPSN-TGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWV 565
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 196/415 (47%), Gaps = 47/415 (11%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQ 111
+ IH+ +L G + + KL+ + +ARQVFDDL + +N +I Y +
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 112 GQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVD 171
+++L + + ++ D FTF +LKA + S +GR VH Q+ + D
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQ------MGRFVHAQVFRLGFD 151
Query: 172 VEKDDVLCTALTDSYVKNGRIAYARTVFD--VMSEKNVISSTSLISGYMNQGLFKDAECI 229
D + L Y K R+ ARTVF+ + E+ ++S T+++S Y G +A
Sbjct: 152 A--DVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEA--- 206
Query: 230 FQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAA 289
LE++ M++++ +P+ S++ A + +
Sbjct: 207 -----------------------------LEIFSQMRKMDVKPDWVALVSVLNAFTCLQD 237
Query: 290 FEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDG 349
+ G+ + + ++K L +L MY+KCG+V ++ +FD M N+ W +MI G
Sbjct: 238 LKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISG 297
Query: 350 YGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSM-ENEYKV 408
Y KNG+ EA+++F +M I V P+ ++ SA+SACA G +++ +++ + ++Y+
Sbjct: 298 YAKNGYAREAIDMFHEM-INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRD 356
Query: 409 KPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMA 463
+ + ++D+ + G + A R +R + VW+A++ LHG A
Sbjct: 357 DVFIS--SALIDMFAKCGSVEGARLVFDRTLDR-DVVVWSAMIVGYGLHGRAREA 408
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 154/314 (49%), Gaps = 31/314 (9%)
Query: 211 TSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNF 270
T LI + G A +F I +NA+I GYS+ + +L +Y +MQ
Sbjct: 57 TKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQD-ALLMYSNMQLARV 115
Query: 271 RPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRR 330
P+ TF ++ ACS ++ ++G+ V +Q+ + F + + + LI +Y+KC R+ +R
Sbjct: 116 SPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSART 175
Query: 331 VFD--HMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSA--- 385
VF+ + ++ + SWT+++ Y +NG P EALE+F +M+ + V P++V +S L+A
Sbjct: 176 VFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMR-KMDVKPDWVALVSVLNAFTC 234
Query: 386 --------CAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMR 437
HA +V GLEI E + + + C G++ A +
Sbjct: 235 LQDLKQGRSIHASVVKMGLEI----EPDLLISLNTMYAKC--------GQVATAKILFDK 282
Query: 438 MPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDS 497
M + PN +W A++S +G A E+ +N + RP +++++ ++A + S
Sbjct: 283 M-KSPNLILWNAMISGYAKNGYAREAIDMFHEM--INKDVRPDT-ISITSAISACAQVGS 338
Query: 498 VSELREVMKERGIS 511
+ + R + + G S
Sbjct: 339 LEQARSMYEYVGRS 352
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 168/429 (39%), Gaps = 86/429 (20%)
Query: 23 LQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNC 82
++ D P L + L + G++IH+ ++K G ++ I L +Y KC
Sbjct: 213 MRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQ 272
Query: 83 LRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKA 142
+ A+ +FD ++ L +N MI Y K G E++ + ++ + D + + + A
Sbjct: 273 VATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISA 332
Query: 143 STSTSGRNVAPLGDL--GRIVHVQILKADVDVEKDDV-LCTALTDSYVKNGRIAYARTVF 199
A +G L R ++ + ++D +DDV + +AL D + K G + AR VF
Sbjct: 333 --------CAQVGSLEQARSMYEYVGRSDY---RDDVFISSALIDMFAKCGSVEGARLVF 381
Query: 200 DVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSL 259
D +++V+ +++I GY G ++A +
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGRAREA--------------------------------I 409
Query: 260 EVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMY 319
+Y M+R PN TF ++ AC+ G FF
Sbjct: 410 SLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWW---------FFN------------ 448
Query: 320 SKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTF 379
R+ DH + +ID G+ G D+A E+ + M ++ P +
Sbjct: 449 ----------RMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQ----PGVTVW 494
Query: 380 LSALSACAHAGLVDKGLEIFQSMENEYKVKP-RMEHYACVVDLLGRAGRLNQAWEFVMRM 438
+ LSAC V+ G Q + + + P HY + +L A ++ E +RM
Sbjct: 495 GALLSACKKHRHVELGEYAAQQL---FSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRM 551
Query: 439 PERP-NSDV 446
E+ N DV
Sbjct: 552 KEKGLNKDV 560
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 168/488 (34%), Positives = 266/488 (54%), Gaps = 46/488 (9%)
Query: 36 SNTLQYYINSDTPSSGQTIHSHILKT-GFVPNTNISIKLLVLYLKCNCLRYARQVFDDLR 94
++ L I++ + G I S IL N + KL+ L+ C L AR++FDD+
Sbjct: 135 TDLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVT 194
Query: 95 DKTL---SAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNV 151
D +L + M Y + G ++L + +L S + F+ S+ LKA V
Sbjct: 195 DSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRV 254
Query: 152 APLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISST 211
GR +H QI+K V++ V++V
Sbjct: 255 ------GRGIHAQIVKRKEKVDQ----------------------VVYNV---------- 276
Query: 212 SLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFR 271
L+ YM GLF DA +F ++++V +N++I SK ++ MQ
Sbjct: 277 -LLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVR-VHEMFNLFRKMQEEMIG 334
Query: 272 PNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRV 331
+ +T +I+ ACS VAA G+++ +Q++K+ + L ++L+DMY KCG V SRRV
Sbjct: 335 FSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRV 394
Query: 332 FDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGL 391
FD M K++ SW M++ Y NG +E + LF+ M IE GV P+ +TF++ LS C+ GL
Sbjct: 395 FDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWM-IESGVAPDGITFVALLSGCSDTGL 453
Query: 392 VDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALL 451
+ GL +F+ M+ E++V P +EHYAC+VD+LGRAG++ +A + + MP +P++ +W +LL
Sbjct: 454 TEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLL 513
Query: 452 SSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGIS 511
+SCRLHGN + ++AA ELF L + PG YV +SN A A+ WD+V ++RE+MK+RG+
Sbjct: 514 NSCRLHGNVSVGEIAAKELFVLEPHN-PGNYVMVSNIYADAKMWDNVDKIREMMKQRGVK 572
Query: 512 KDTACSWV 519
K+ CSWV
Sbjct: 573 KEAGCSWV 580
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 283 bits (723), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 160/467 (34%), Positives = 259/467 (55%), Gaps = 41/467 (8%)
Query: 50 SGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYL 109
SG+ H G+ + +S L+V+Y C L AR+VFD++ + + ++ MI Y
Sbjct: 94 SGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYD 153
Query: 110 KQGQVEESLGLVRRLLVSGEKLDGFTF--SMILKASTSTSGRNVAPLGDLGRIVHVQILK 167
G +++ L + LLV D F SM L + S R P L +H ++K
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSR--VPAKGLTESIHSFVIK 211
Query: 168 ADVDVEKDDVLCTALTDSYVKNGR--IAYARTVFDVMSEKNVISSTSLISGYMNQGLFKD 225
D + + L D+Y K G +A AR +FD + +K+ +S S++S Y G+ +
Sbjct: 212 RGFD--RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNE 269
Query: 226 AECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACS 285
A +F++ V +V FNA+ T ++++ A S
Sbjct: 270 AFEVFRRLVKNKVVTFNAI-------------------------------TLSTVLLAVS 298
Query: 286 MVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTS 345
A +G+ + Q+++ + +G+++IDMY KCGRV +R+ FD M KNV SWT+
Sbjct: 299 HSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTA 358
Query: 346 MIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENE 405
MI GYG +G +ALELF M I+ GV PN++TF+S L+AC+HAGL +G F +M+
Sbjct: 359 MIAGYGMHGHAAKALELFPAM-IDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGR 417
Query: 406 YKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKL 465
+ V+P +EHY C+VDLLGRAG L +A++ + RM +P+S +W++LL++CR+H N E+A++
Sbjct: 418 FGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEI 477
Query: 466 AASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISK 512
+ + LF+L+++ G Y+ LS+ A A +W V +R +MK RG+ K
Sbjct: 478 SVARLFELDSSN-CGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVK 523
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 104/193 (53%), Gaps = 7/193 (3%)
Query: 201 VMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDK-DIVVFNAMIEGYSKTSECATRSL 259
V S+K + S S + ++ +F + VDK D+ +N++I +++ + A +L
Sbjct: 3 VRSKKALFCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSA-EAL 61
Query: 260 EVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMY 319
+ M++L+ P S+F I ACS + G+Q Q + I + SALI MY
Sbjct: 62 LAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMY 121
Query: 320 SKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEY-----GVVP 374
S CG++ D+R+VFD + ++N+ SWTSMI GY NG +A+ LF+ + ++ +
Sbjct: 122 STCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFL 181
Query: 375 NFVTFLSALSACA 387
+ + +S +SAC+
Sbjct: 182 DSMGLVSVISACS 194
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 67/140 (47%), Gaps = 1/140 (0%)
Query: 12 SRALFSPHQPFLQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISI 71
S F + ++N ++ LS L +S G+ IH +++ G + +
Sbjct: 267 SNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGT 326
Query: 72 KLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKL 131
++ +Y KC + AR+ FD +++K + ++ MI Y G ++L L ++ SG +
Sbjct: 327 SIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP 386
Query: 132 DGFTFSMILKASTSTSGRNV 151
+ TF +L A+ S +G +V
Sbjct: 387 NYITFVSVL-AACSHAGLHV 405
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 282 bits (721), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 162/540 (30%), Positives = 278/540 (51%), Gaps = 82/540 (15%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ +H ILK+GF ++ L+ YLK + AR+VFD++ ++ + ++N +I Y+
Sbjct: 214 GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 273
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
G E+ L + ++LVSG ++D T + + L LGR VH +KA
Sbjct: 274 NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSR------LISLGRAVHSIGVKACF 327
Query: 171 DVEKDDVLCTALTD-------------------------------SYVKNGRIAYARTVF 199
++D C L D Y + G A +F
Sbjct: 328 S--REDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLF 385
Query: 200 DVMSEK---------------------------------------NVISSTSLISGYMNQ 220
+ M E+ ++ S +L+ Y
Sbjct: 386 EEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKC 445
Query: 221 GLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVY-IDMQRLNFRPNISTFAS 279
G ++AE +F + KDI+ +N +I GYSK A +L ++ + ++ F P+ T A
Sbjct: 446 GSMQEAELVFSEMRVKDIISWNTIIGGYSKNCY-ANEALSLFNLLLEEKRFSPDERTVAC 504
Query: 280 IIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKN 339
++ AC+ ++AF+ G+++ +M+ +F + ++L+DMY+KCG ++ + +FD + K+
Sbjct: 505 VLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKD 564
Query: 340 VFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIF 399
+ SWT MI GYG +GF EA+ LF +M+ + G+ + ++F+S L AC+H+GLVD+G F
Sbjct: 565 LVSWTVMIAGYGMHGFGKEAIALFNQMR-QAGIEADEISFVSLLYACSHSGLVDEGWRFF 623
Query: 400 QSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGN 459
M +E K++P +EHYAC+VD+L R G L +A+ F+ MP P++ +W ALL CR+H +
Sbjct: 624 NIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHD 683
Query: 460 TEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
++A+ A ++F+L G YV ++N A AEKW+ V LR+ + +RG+ K+ CSW+
Sbjct: 684 VKLAEKVAEKVFELEPEN-TGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWI 742
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 208/406 (51%), Gaps = 46/406 (11%)
Query: 27 DFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYA 86
D P + L + LQ +S + G+ + + I GFV ++N+ KL ++Y C L+ A
Sbjct: 91 DIDPRT--LCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEA 148
Query: 87 RQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTST 146
+VFD+++ + +N ++ K G S+GL ++++ SG ++D +TFS + K+ +S
Sbjct: 149 SRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSL 208
Query: 147 SGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKN 206
R+V G +H ILK+ E++ V +L Y+KN R+ AR VFD M+E++
Sbjct: 209 --RSVHG----GEQLHGFILKSGFG-ERNSV-GNSLVAFYLKNQRVDSARKVFDEMTERD 260
Query: 207 VISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQ 266
VIS S+I+GY++ GL A + L V++ M
Sbjct: 261 VISWNSIINGYVSNGL--------------------------------AEKGLSVFVQML 288
Query: 267 RLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVV 326
+++T S+ C+ +G+ V S +K F + + L+DMYSKCG +
Sbjct: 289 VSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLD 348
Query: 327 DSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSAC 386
++ VF M ++V S+TSMI GY + G EA++LF++M+ E G+ P+ T + L+ C
Sbjct: 349 SAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME-EEGISPDVYTVTAVLNCC 407
Query: 387 AHAGLVDKGLEIFQSM-ENEYKVKPRMEHYACVVDLLGRAGRLNQA 431
A L+D+G + + + EN+ + + ++D+ + G + +A
Sbjct: 408 ARYRLLDEGKRVHEWIKENDLGFDIFVSN--ALMDMYAKCGSMQEA 451
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 61/125 (48%)
Query: 22 FLQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCN 81
L+ F P ++ L + G+ IH +I++ G+ + +++ L+ +Y KC
Sbjct: 489 LLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCG 548
Query: 82 CLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILK 141
L A +FDD+ K L ++ MI Y G +E++ L ++ +G + D +F +L
Sbjct: 549 ALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLY 608
Query: 142 ASTST 146
A + +
Sbjct: 609 ACSHS 613
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 281 bits (720), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 162/473 (34%), Positives = 263/473 (55%), Gaps = 46/473 (9%)
Query: 49 SSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAY 108
S G+ IH + +++GF NIS L+ +Y KC L ARQ+FD + ++ + ++N MI AY
Sbjct: 253 SVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAY 312
Query: 109 LKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDL--GRIVHVQIL 166
++ +E++ + +++L G K + L A A LGDL GR +H
Sbjct: 313 VQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHAC--------ADLGDLERGRFIH---- 360
Query: 167 KADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDA 226
K V++ D +NV SLIS Y A
Sbjct: 361 KLSVELGLD-----------------------------RNVSVVNSLISMYCKCKEVDTA 391
Query: 227 ECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSM 286
+F K + +V +NAMI G+++ +L + M+ +P+ T+ S+I A +
Sbjct: 392 ASMFGKLQSRTLVSWNAMILGFAQNGR-PIDALNYFSQMRSRTVKPDTFTYVSVITAIAE 450
Query: 287 VAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSM 346
++ + + +M++ ++ + +AL+DMY+KCG ++ +R +FD M +++V +W +M
Sbjct: 451 LSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAM 510
Query: 347 IDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEY 406
IDGYG +GF ALELF++MQ + + PN VTFLS +SAC+H+GLV+ GL+ F M+ Y
Sbjct: 511 IDGYGTHGFGKAALELFEEMQ-KGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENY 569
Query: 407 KVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLA 466
++ M+HY +VDLLGRAGRLN+AW+F+M+MP +P +V+ A+L +C++H N A+ A
Sbjct: 570 SIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKA 629
Query: 467 ASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
A LF+LN + G +V L+N AA W+ V ++R M +G+ K CS V
Sbjct: 630 AERLFELNPDD-GGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMV 681
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 175/379 (46%), Gaps = 41/379 (10%)
Query: 17 SPHQPFLQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVL 76
S H+ FL +++P + + + I + K G KL+ L
Sbjct: 19 SRHRHFLSERNYIPANVYEHPAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSL 78
Query: 77 YLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTF 136
+ + + A +VF+ + K Y+ M+ + K ++++L R+ + + F
Sbjct: 79 FCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNF 138
Query: 137 SMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYAR 196
+ +LK + V G+ +H ++K+ + D T L + Y K ++ AR
Sbjct: 139 TYLLKVCGDEAELRV------GKEIHGLLVKSGFSL--DLFAMTGLENMYAKCRQVNEAR 190
Query: 197 TVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECAT 256
VFD M E+ D+V +N ++ GYS+ A
Sbjct: 191 KVFDRMPER-------------------------------DLVSWNTIVAGYSQNG-MAR 218
Query: 257 RSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALI 316
+LE+ M N +P+ T S++ A S + VG+++ M++ F + + +AL+
Sbjct: 219 MALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALV 278
Query: 317 DMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNF 376
DMY+KCG + +R++FD M ++NV SW SMID Y +N P EA+ +FQKM ++ GV P
Sbjct: 279 DMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKM-LDEGVKPTD 337
Query: 377 VTFLSALSACAHAGLVDKG 395
V+ + AL ACA G +++G
Sbjct: 338 VSVMGALHACADLGDLERG 356
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 156/488 (31%), Positives = 259/488 (53%), Gaps = 48/488 (9%)
Query: 77 YLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRL----------LV 126
Y+K + AR+VFD + ++ + ++ ++ Y+ G+V+ + L ++ ++
Sbjct: 89 YMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVML 148
Query: 127 SGEKLDGFT------FSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCT 180
G DG + MI + L GR+ + + ++ E+ + T
Sbjct: 149 IGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMS-ERSVITWT 207
Query: 181 ALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVV 240
+ Y +N R+ AR +FDVM EK +S TS++ GY+ G +DAE +F+ K ++
Sbjct: 208 TMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIA 267
Query: 241 FNAMIEGYSKTSECAT------------------------------RSLEVYIDMQRLNF 270
NAMI G + E A +L+++I MQ+
Sbjct: 268 CNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGV 327
Query: 271 RPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRR 330
RP T SI+ C+ +A+ G+QV +QL++ F + + S L+ MY KCG +V S+
Sbjct: 328 RPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKL 387
Query: 331 VFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAG 390
+FD K++ W S+I GY +G +EAL++F +M + PN VTF++ LSAC++AG
Sbjct: 388 IFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAG 447
Query: 391 LVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAAL 450
+V++GL+I++SME+ + VKP HYAC+VD+LGRAGR N+A E + M P++ VW +L
Sbjct: 448 MVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSL 507
Query: 451 LSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGI 510
L +CR H ++A+ A +L ++ G Y+ LSN A+ +W V+ELR++MK R +
Sbjct: 508 LGACRTHSQLDVAEFCAKKLIEIEPEN-SGTYILLSNMYASQGRWADVAELRKLMKTRLV 566
Query: 511 SKDTACSW 518
K CSW
Sbjct: 567 RKSPGCSW 574
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 136/282 (48%), Gaps = 32/282 (11%)
Query: 181 ALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVV 240
L Y+KNG I AR VFD+M E+NV+S T+L+ GY++ G AE +F K +K+ V
Sbjct: 84 GLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVS 143
Query: 241 FNAMIEGYSKTSEC--ATRSLEVYIDMQRLNFRPNISTFASIIGACS---MVAAFEVGQQ 295
+ M+ G+ + A + E+ D + NI+ + I G C + A E+ +
Sbjct: 144 WTVMLIGFLQDGRIDDACKLYEMIPD------KDNIARTSMIHGLCKEGRVDEAREIFDE 197
Query: 296 VQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGF 355
+ + + T + ++ Y + RV D+R++FD M +K SWTSM+ GY +NG
Sbjct: 198 MSERSVIT--------WTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGR 249
Query: 356 PDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHY 415
++A ELF+ M ++ + N + +S G + K +F SM+ +
Sbjct: 250 IEDAEELFEVMPVKPVIACN-----AMISGLGQKGEIAKARRVFDSMKERNDAS-----W 299
Query: 416 ACVVDLLGRAGRLNQAWEFVMRMPE---RPNSDVWAALLSSC 454
V+ + R G +A + + M + RP ++LS C
Sbjct: 300 QTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVC 341
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 132/290 (45%), Gaps = 46/290 (15%)
Query: 195 ARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSEC 254
AR +FD M ++N+IS L+SGYM G +A +F ++++V + A+++GY +
Sbjct: 67 ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKV 126
Query: 255 ATRSLEVYIDMQRLNFRPNISTFASIIG---------ACSMVAAFEVGQQVQSQLMKTPF 305
+ ++ M N +S +IG AC + +
Sbjct: 127 DV-AESLFWKMPEKN---KVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIAR------- 175
Query: 306 FGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQK 365
+++I K GRV ++R +FD M +++V +WT+M+ GYG+N D+A ++F
Sbjct: 176 -------TSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDV 228
Query: 366 MQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYAC--VVDLLG 423
M + V++ S L G ++ E+F+ M VKP + AC ++ LG
Sbjct: 229 MPEK-----TEVSWTSMLMGYVQNGRIEDAEELFEVM----PVKPVI---ACNAMISGLG 276
Query: 424 RAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKL 473
+ G + +A M ER N W ++ +G +L A +LF L
Sbjct: 277 QKGEIAKARRVFDSMKER-NDASWQTVIKIHERNG----FELEALDLFIL 321
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 87/195 (44%), Gaps = 15/195 (7%)
Query: 316 IDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPN 375
I S+ G++ ++R++FD K++ SW SM+ GY N P +A +LF +M N
Sbjct: 24 ITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDR-----N 78
Query: 376 FVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFV 435
+++ +S G +D+ ++F M V + +V G+++ A
Sbjct: 79 IISWNGLVSGYMKNGEIDEARKVFDLMPERNVVS-----WTALVKGYVHNGKVDVAESLF 133
Query: 436 MRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKW 495
+MPE+ N W +L G + A +L+++ + A ++ + L +
Sbjct: 134 WKMPEK-NKVSWTVMLIGFLQDGRID----DACKLYEMIPDKDNIARTSMIHGLCKEGRV 188
Query: 496 DSVSELREVMKERGI 510
D E+ + M ER +
Sbjct: 189 DEAREIFDEMSERSV 203
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 159/469 (33%), Positives = 252/469 (53%), Gaps = 11/469 (2%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G +H K + + + + +Y C + YAR VFD++ + + +N MI Y +
Sbjct: 130 GMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCR 189
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
G V+E+ L + S D MIL S GR G++ + +
Sbjct: 190 FGLVDEAFKLFEEMKDSNVMPD----EMILCNIVSACGRT----GNMRYNRAIYEFLIEN 241
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
DV D L TAL Y G + AR F MS +N+ ST+++SGY G DA+ IF
Sbjct: 242 DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIF 301
Query: 231 QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAF 290
+T KD+V + MI Y + S+ +L V+ +M +P++ + S+I AC+ +
Sbjct: 302 DQTEKKDLVCWTTMISAYVE-SDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGIL 360
Query: 291 EVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGY 350
+ + V S + + + +ALI+MY+KCG + +R VF+ M ++NV SW+SMI+
Sbjct: 361 DKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINAL 420
Query: 351 GKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKP 410
+G +AL LF +M+ E V PN VTF+ L C+H+GLV++G +IF SM +EY + P
Sbjct: 421 SMHGEASDALSLFARMKQE-NVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITP 479
Query: 411 RMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASEL 470
++EHY C+VDL GRA L +A E + MP N +W +L+S+CR+HG E+ K AA +
Sbjct: 480 KLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRI 539
Query: 471 FKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
+L + GA V +SN A ++W+ V +R VM+E+ + K+ S +
Sbjct: 540 LELEPD-HDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRI 587
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 196/417 (47%), Gaps = 31/417 (7%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLS-AYNYMIGAYLK 110
+ +H+HIL+T N + L + L YA VF + S +N + +
Sbjct: 29 KQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPPESIVFNPFLRDLSR 88
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
+ ++ +R+ G +LD F+F ILKA + S L + + + +
Sbjct: 89 SSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSA--------LFEGMELHGVAFKI 140
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
D + T D Y GRI YAR VFD MS ++V++ ++I Y GL +A +F
Sbjct: 141 ATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLF 200
Query: 231 QKTVDKDI----VVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSM 286
++ D ++ ++ ++ +T + +Y + + R + +++ +
Sbjct: 201 EEMKDSNVMPDEMILCNIVSACGRTGN-MRYNRAIYEFLIENDVRMDTHLLTALVTMYAG 259
Query: 287 VAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSM 346
++ ++ ++ F + +A++ YSKCGR+ D++ +FD +K++ WT+M
Sbjct: 260 AGCMDMAREFFRKMSVRNLF----VSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTM 315
Query: 347 IDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEI-----FQS 401
I Y ++ +P EAL +F++M G+ P+ V+ S +SACA+ G++DK +
Sbjct: 316 ISAYVESDYPQEALRVFEEMCCS-GIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNG 374
Query: 402 MENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHG 458
+E+E + + +++ + G L+ + +MP R N W++++++ +HG
Sbjct: 375 LESELSINNAL------INMYAKCGGLDATRDVFEKMPRR-NVVSWSSMINALSMHG 424
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 163/528 (30%), Positives = 281/528 (53%), Gaps = 38/528 (7%)
Query: 25 NHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLR 84
+H +P S +L N + G+ IH +G + + + +Y++C +
Sbjct: 109 SHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMG 168
Query: 85 YARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEK---------LDGFT 135
AR+VFD + DK + + ++ AY ++G +EE + ++ + SG + L GF
Sbjct: 169 DARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFN 228
Query: 136 FSMILKAST--------------STSGRNVAP-LGD-----LGRIVHVQILKADVDVEKD 175
S K + + +V P +GD +GR++H ++K + KD
Sbjct: 229 RSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGL--LKD 286
Query: 176 DVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQ---- 231
+ +A+ D Y K+G + ++F+ + I+G GL A +F+
Sbjct: 287 KCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKE 346
Query: 232 KTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFE 291
+T++ ++V + ++I G ++ + +LE++ +MQ +PN T S++ AC +AA
Sbjct: 347 QTMELNVVSWTSIIAGCAQNGK-DIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALG 405
Query: 292 VGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYG 351
G+ ++ ++ +GSALIDMY+KCGR+ S+ VF+ M KN+ W S+++G+
Sbjct: 406 HGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFS 465
Query: 352 KNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPR 411
+G E + +F+ + + + P+F++F S LSAC GL D+G + F+ M EY +KPR
Sbjct: 466 MHGKAKEVMSIFESL-MRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPR 524
Query: 412 MEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELF 471
+EHY+C+V+LLGRAG+L +A++ + MP P+S VW ALL+SCRL N ++A++AA +LF
Sbjct: 525 LEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLF 584
Query: 472 KLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
L PG YV LSN AA W V +R M+ G+ K+ CSW+
Sbjct: 585 HLEPE-NPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWI 631
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 197/446 (44%), Gaps = 51/446 (11%)
Query: 55 HSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQV 114
H+ ILK+G + IS KL+ Y NC A V + D T+ +++ +I A K
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 115 EESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEK 174
+S+G+ R+ G D + K S V G+ +H + +D+
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKV------GKQIHCVSCVSGLDM-- 149
Query: 175 DDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKT- 233
D + ++ Y++ GR+ AR VFD MS+K+V++ ++L+ Y +G ++ I +
Sbjct: 150 DAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEME 209
Query: 234 ---VDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAF 290
++ +IV +N ++ G++++ ++ ++ + L F P+ T +S++ +
Sbjct: 210 SSGIEANIVSWNGILSGFNRSGY-HKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEML 268
Query: 291 EVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMH-------------- 336
+G+ + ++K + SA+IDMY K G V +F+
Sbjct: 269 NMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGL 328
Query: 337 ---------------------QKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPN 375
+ NV SWTS+I G +NG EALELF++MQ+ GV PN
Sbjct: 329 SRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVA-GVKPN 387
Query: 376 FVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFV 435
VT S L AC + + G + + + ++D+ + GR+N + + V
Sbjct: 388 HVTIPSMLPACGNIAALGHGRST-HGFAVRVHLLDNVHVGSALIDMYAKCGRINLS-QIV 445
Query: 436 MRMPERPNSDVWAALLSSCRLHGNTE 461
M N W +L++ +HG +
Sbjct: 446 FNMMPTKNLVCWNSLMNGFSMHGKAK 471
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 279 bits (713), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 157/469 (33%), Positives = 263/469 (56%), Gaps = 16/469 (3%)
Query: 54 IHSHILKTGFVPNTN---ISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
IH+ IL+ + + +++KL Y +R++ +F D L + I
Sbjct: 48 IHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASI 107
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
G +++ L +LL S + FTFS +LK+ ++ SG+ ++H +LK +
Sbjct: 108 NGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKSGK----------LIHTHVLKFGL 157
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
+ D + T L D Y K G + A+ VFD M E++++SST++I+ Y QG + A +F
Sbjct: 158 GI--DPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALF 215
Query: 231 QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAF 290
++DIV +N MI+GY++ + + +P+ T + + ACS + A
Sbjct: 216 DSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGAL 275
Query: 291 EVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGY 350
E G+ + + + ++K+ + LIDMYSKCG + ++ VF+ +K++ +W +MI GY
Sbjct: 276 ETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGY 335
Query: 351 GKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKP 410
+G+ +AL LF +MQ G+ P +TF+ L ACAHAGLV++G+ IF+SM EY +KP
Sbjct: 336 AMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKP 395
Query: 411 RMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASEL 470
++EHY C+V LLGRAG+L +A+E + M +S +W+++L SC+LHG+ + K A L
Sbjct: 396 KIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYL 455
Query: 471 FKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
LN G YV LSN A+ ++ V+++R +MKE+GI K+ S +
Sbjct: 456 IGLNIKNS-GIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTI 503
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 131/286 (45%), Gaps = 24/286 (8%)
Query: 23 LQNHDFVPHSTLLSN-------TLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLV 75
L++ F+ + LLS+ T + S + SG+ IH+H+LK G + ++ L+
Sbjct: 110 LKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVD 169
Query: 76 LYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFT 135
+Y K + A++VFD + +++L + MI Y KQG VE + R L S + D +
Sbjct: 170 VYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAA----RALFDSMCERDIVS 225
Query: 136 FSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYA 195
+++++ N A ++ Q L A+ + D++ A + + G +
Sbjct: 226 WNVMIDGYAQHGFPNDA-------LMLFQKLLAEGKPKPDEITVVAALSACSQIGALETG 278
Query: 196 RTVFDVMSEK----NVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKT 251
R + + NV T LI Y G ++A +F T KDIV +NAMI GY+
Sbjct: 279 RWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMH 338
Query: 252 SECATRSLEVYIDMQRLN-FRPNISTFASIIGACSMVAAFEVGQQV 296
+ +L ++ +MQ + +P TF + AC+ G ++
Sbjct: 339 GY-SQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRI 383
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 279 bits (713), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 154/447 (34%), Positives = 255/447 (57%), Gaps = 19/447 (4%)
Query: 73 LLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLD 132
LL ++K + ARQ FD + + + ++N +I Y + G+++E+ R+L D
Sbjct: 225 LLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEA----RQLFDESPVQD 280
Query: 133 GFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRI 192
FT++ ++ R+V D E+++V A+ YV+ R+
Sbjct: 281 VFTWTAMVSGYIQN------------RMVEEARELFDKMPERNEVSWNAMLAGYVQGERM 328
Query: 193 AYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTS 252
A+ +FDVM +NV + ++I+GY G +A+ +F K +D V + AMI GYS++
Sbjct: 329 EMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSG 388
Query: 253 ECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLG 312
+ +L +++ M+R R N S+F+S + C+ V A E+G+Q+ +L+K + +G
Sbjct: 389 H-SFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVG 447
Query: 313 SALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGV 372
+AL+ MY KCG + ++ +F M K++ SW +MI GY ++GF + AL F+ M+ E G+
Sbjct: 448 NALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKRE-GL 506
Query: 373 VPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAW 432
P+ T ++ LSAC+H GLVDKG + F +M +Y V P +HYAC+VDLLGRAG L A
Sbjct: 507 KPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAH 566
Query: 433 EFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAA 492
+ MP P++ +W LL + R+HGNTE+A+ AA ++F + G YV LSN A++
Sbjct: 567 NLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPEN-SGMYVLLSNLYASS 625
Query: 493 EKWDSVSELREVMKERGISKDTACSWV 519
+W V +LR M+++G+ K SW+
Sbjct: 626 GRWGDVGKLRVRMRDKGVKKVPGYSWI 652
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 178/406 (43%), Gaps = 74/406 (18%)
Query: 58 ILKTGF--VPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVE 115
+LK G + N++I + +CN A +VF + + +YN MI YL+ G+ E
Sbjct: 56 LLKCGDSDIKEWNVAISSYMRTGRCN---EALRVFKRMPRWSSVSYNGMISGYLRNGEFE 112
Query: 116 ESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKD 175
L R+L + D ++++++K RN+ +L I+ E+D
Sbjct: 113 ----LARKLFDEMPERDLVSWNVMIKGYVRN--RNLGKARELFEIM----------PERD 156
Query: 176 DVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVD 235
+ Y +NG + AR+VFD M EKN +S +L+S Y+ ++A +F+ +
Sbjct: 157 VCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSREN 216
Query: 236 KDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQ 295
+V +N ++ G+ K + +E +N R +S I G
Sbjct: 217 WALVSWNCLLGGFVKKKKI----VEARQFFDSMNVRDVVSWNTIITG------------- 259
Query: 296 VQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGF 355
Y++ G++ ++R++FD ++VF+WT+M+ GY +N
Sbjct: 260 -----------------------YAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRM 296
Query: 356 PDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHY 415
+EA ELF KM N V++ + L+ ++ E+F M + +
Sbjct: 297 VEEARELFDKMPER-----NEVSWNAMLAGYVQGERMEMAKELFDVMPCR-----NVSTW 346
Query: 416 ACVVDLLGRAGRLNQAWEFVMRMPER-PNSDVWAALLSSCRLHGNT 460
++ + G++++A +MP+R P S WAA+++ G++
Sbjct: 347 NTMITGYAQCGKISEAKNLFDKMPKRDPVS--WAAMIAGYSQSGHS 390
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 279 bits (713), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 157/501 (31%), Positives = 278/501 (55%), Gaps = 47/501 (9%)
Query: 22 FLQNHD-FVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKC 80
FL+N D F P +S+ L+ + S + I++++LK GFV + + L+ +Y KC
Sbjct: 296 FLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKC 355
Query: 81 NCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMIL 140
+ AR VF+ + K ++N +I Y++ G + E++ L + +++ E+ D T+ M++
Sbjct: 356 GDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLI 415
Query: 141 KASTSTSGRNVAPLGDL--GRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTV 198
ST L DL G+ +H +K+ + + D + AL D Y K G + + +
Sbjct: 416 SVSTR--------LADLKFGKGLHSNGIKSGICI--DLSVSNALIDMYAKCGEVGDSLKI 465
Query: 199 FDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRS 258
F M + ++ ++IS + G F
Sbjct: 466 FSSMGTGDTVTWNTVISACVRFGDF--------------------------------ATG 493
Query: 259 LEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDM 318
L+V M++ P+++TF + C+ +AA +G+++ L++ + +++G+ALI+M
Sbjct: 494 LQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEM 553
Query: 319 YSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVT 378
YSKCG + +S RVF+ M +++V +WT MI YG G ++ALE F M+ + G+VP+ V
Sbjct: 554 YSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADME-KSGIVPDSVV 612
Query: 379 FLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRM 438
F++ + AC+H+GLVD+GL F+ M+ YK+ P +EHYACVVDLL R+ ++++A EF+ M
Sbjct: 613 FIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAM 672
Query: 439 PERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSV 498
P +P++ +WA++L +CR G+ E A+ + + +LN + PG + SN AA KWD V
Sbjct: 673 PIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDD-PGYSILASNAYAALRKWDKV 731
Query: 499 SELREVMKERGISKDTACSWV 519
S +R+ +K++ I+K+ SW+
Sbjct: 732 SLIRKSLKDKHITKNPGYSWI 752
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 114/476 (23%), Positives = 199/476 (41%), Gaps = 80/476 (16%)
Query: 3 NGILRPFFSSRALFSPHQPF---LQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHIL 59
N I+R F S LF F L+ P + ++ G ++ IL
Sbjct: 75 NSIIRAF-SKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQIL 133
Query: 60 KTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLG 119
GF + + L+ +Y + L ARQVFD++ + L ++N +I Y G EE+L
Sbjct: 134 DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALE 193
Query: 120 LVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDL-----GRIVHVQILKADVDVEK 174
+ L S D FT S +L A G+L G+ +H LK+ V+
Sbjct: 194 IYHELKNSWIVPDSFTVSSVLPA-----------FGNLLVVKQGQGLHGFALKSGVNSVV 242
Query: 175 DDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTV 234
L Y+K R AR VFD M ++ +S
Sbjct: 243 VVN--NGLVAMYLKFRRPTDARRVFDEMDVRDSVS------------------------- 275
Query: 235 DKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQ 294
+N MI GY K E S+ ++++ F+P++ T +S++ AC + + +
Sbjct: 276 ------YNTMICGYLKL-EMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAK 327
Query: 295 QVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNG 354
+ + ++K F + + LID+Y+KCG ++ +R VF+ M K+ SW S+I GY ++G
Sbjct: 328 YIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSG 387
Query: 355 FPDEALELFQKMQIEYGVVPNFVTFLSALSACA-----------HAGLVDKGLEIFQSME 403
EA++LF+ M I + +T+L +S H+ + G+ I S+
Sbjct: 388 DLMEAMKLFKMMMI-MEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVS 446
Query: 404 NEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGN 459
N ++D+ + G + + + M ++ W ++S+C G+
Sbjct: 447 N------------ALIDMYAKCGEVGDSLKIFSSMGT-GDTVTWNTVISACVRFGD 489
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 139/293 (47%), Gaps = 42/293 (14%)
Query: 96 KTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLG 155
K + +N +I A+ K G E+L +L S D +TF ++KA +G A +G
Sbjct: 69 KNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKA---CAGLFDAEMG 125
Query: 156 DLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLIS 215
DL V+ QIL D+ E D + AL D Y + G + AR VFD M ++++S SLIS
Sbjct: 126 DL---VYEQIL--DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLIS 180
Query: 216 GYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNIS 275
GY + G +++A LE+Y +++ P+
Sbjct: 181 GYSSHGYYEEA--------------------------------LEIYHELKNSWIVPDSF 208
Query: 276 TFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHM 335
T +S++ A + + GQ + +K+ + + + L+ MY K R D+RRVFD M
Sbjct: 209 TVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEM 268
Query: 336 HQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAH 388
++ S+ +MI GY K +E++ +F + ++ P+ +T S L AC H
Sbjct: 269 DVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFK--PDLLTVSSVLRACGH 319
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 95/160 (59%), Gaps = 2/160 (1%)
Query: 236 KDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQ 295
K++ ++N++I +SK +LE Y ++ P+ TF S+I AC+ + E+G
Sbjct: 69 KNVYLWNSIIRAFSKNG-LFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 296 VQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGF 355
V Q++ F + +G+AL+DMYS+ G + +R+VFD M +++ SW S+I GY +G+
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 356 PDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKG 395
+EALE++ +++ + +VP+ T S L A + +V +G
Sbjct: 188 YEEALEIYHELKNSW-IVPDSFTVSSVLPAFGNLLVVKQG 226
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 278 bits (712), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 168/476 (35%), Positives = 259/476 (54%), Gaps = 49/476 (10%)
Query: 49 SSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNC---LRYARQVFDDLRDKTLSAYNYMI 105
S G+ +HS +++G V + S L+ +Y KC+ + R+VFD + D ++ ++ +I
Sbjct: 286 SLGKQLHSWAIRSGLVDDVECS--LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALI 343
Query: 106 GAYLKQGQV-EESLGLVRRLLVSGE-KLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHV 163
Y+K + E++ L ++ G + + FTFS KA + S V G+ V
Sbjct: 344 TGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRV------GKQVLG 397
Query: 164 QILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLF 223
Q K + + + ++ +VK+ R+ A+ F+ +SEKN++S + + G F
Sbjct: 398 QAFKRGL--ASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNF 455
Query: 224 KDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGA 283
+ A + SE R L V + TFAS++
Sbjct: 456 EQA---------------------FKLLSEITERELGV-----------SAFTFASLLSG 483
Query: 284 CSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSW 343
+ V + G+Q+ SQ++K + + +ALI MYSKCG + + RVF+ M +NV SW
Sbjct: 484 VANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISW 543
Query: 344 TSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSME 403
TSMI G+ K+GF LE F +M IE GV PN VT+++ LSAC+H GLV +G F SM
Sbjct: 544 TSMITGFAKHGFAIRVLETFNQM-IEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMY 602
Query: 404 NEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMA 463
++K+KP+MEHYAC+VDLL RAG L A+EF+ MP + + VW L +CR+H NTE+
Sbjct: 603 EDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELG 662
Query: 464 KLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
KLAA ++ +L+ N P AY+ LSN A A KW+ +E+R MKER + K+ CSW+
Sbjct: 663 KLAARKILELDPN-EPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWI 717
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 166/367 (45%), Gaps = 53/367 (14%)
Query: 32 STLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFD 91
S S+ L+ I + G+ +H+ +++ P++ + L+ LY K A VF+
Sbjct: 62 SVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFE 121
Query: 92 DLR---DKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTS- 147
+R + + +++ M+ Y G+ +++ + L G + + ++ +++A +++
Sbjct: 122 TMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDF 181
Query: 148 -GRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVK-NGRIAYARTVFDVMSEK 205
G LG L + H E D + +L D +VK A VFD MSE
Sbjct: 182 VGVGRVTLGFLMKTGH---------FESDVCVGCSLIDMFVKGENSFENAYKVFDKMSEL 232
Query: 206 NVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDM 265
NV++ T +I+ M G ++A + ++DM
Sbjct: 233 NVVTWTLMITRCMQMGFPREA--------------------------------IRFFLDM 260
Query: 266 QRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKC--- 322
F + T +S+ AC+ + +G+Q+ S +++ ++ +L+DMY+KC
Sbjct: 261 VLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVE--CSLVDMYAKCSAD 318
Query: 323 GRVVDSRRVFDHMHQKNVFSWTSMIDGYGKN-GFPDEALELFQKMQIEYGVVPNFVTFLS 381
G V D R+VFD M +V SWT++I GY KN EA+ LF +M + V PN TF S
Sbjct: 319 GSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSS 378
Query: 382 ALSACAH 388
A AC +
Sbjct: 379 AFKACGN 385
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 117/502 (23%), Positives = 219/502 (43%), Gaps = 60/502 (11%)
Query: 28 FVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTG-FVPNTNISIKLLVLYLKC-NCLRY 85
VP+ + ++ NSD G+ ++KTG F + + L+ +++K N
Sbjct: 162 LVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFEN 221
Query: 86 ARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTS 145
A +VFD + + + + MI ++ G E++ +++SG + D FT S + A
Sbjct: 222 AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAE 281
Query: 146 TSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVK---NGRIAYARTVFDVM 202
+ LG+ +H +++ + DDV C+ L D Y K +G + R VFD M
Sbjct: 282 LENLS------LGKQLHSWAIRSGL---VDDVECS-LVDMYAKCSADGSVDDCRKVFDRM 331
Query: 203 SEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVY 262
+ +V+S T A+I GY K AT ++ ++
Sbjct: 332 EDHSVMSWT-------------------------------ALITGYMKNCNLATEAINLF 360
Query: 263 IDM-QRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSK 321
+M + + PN TF+S AC ++ VG+QV Q K + + +++I M+ K
Sbjct: 361 SEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVK 420
Query: 322 CGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKM-QIEYGVVPNFVTFL 380
R+ D++R F+ + +KN+ S+ + +DG +N ++A +L ++ + E GV + TF
Sbjct: 421 SDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGV--SAFTFA 478
Query: 381 SALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYAC--VVDLLGRAGRLNQAWEFVMRM 438
S LS A+ G + KG +I + K+ C ++ + + G ++ A V
Sbjct: 479 SLLSGVANVGSIRKGEQIHSQV---VKLGLSCNQPVCNALISMYSKCGSIDTASR-VFNF 534
Query: 439 PERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVAL----SNTLAAAEK 494
E N W ++++ HG +++ + YVA+ S+ +E
Sbjct: 535 MENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEG 594
Query: 495 WDSVSELREVMKERGISKDTAC 516
W + + E K + + AC
Sbjct: 595 WRHFNSMYEDHKIKPKMEHYAC 616
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 122/262 (46%), Gaps = 46/262 (17%)
Query: 131 LDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNG 190
+D TFS +LK + R+ LG++VH +++ + D+E D VL +L Y K+G
Sbjct: 60 MDSVTFSSLLK--SCIRARDFR----LGKLVHARLI--EFDIEPDSVLYNSLISLYSKSG 111
Query: 191 RIAYARTVFDVM---SEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEG 247
A A VF+ M +++V+S +++++ Y N G DA
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDA--------------------- 150
Query: 248 YSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFF- 306
++V+++ L PN + ++I ACS VG+ LMKT F
Sbjct: 151 -----------IKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFE 199
Query: 307 GHIKLGSALIDMYSKC-GRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQK 365
+ +G +LIDM+ K ++ +VFD M + NV +WT MI + GFP EA+ F
Sbjct: 200 SDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLD 259
Query: 366 MQIEYGVVPNFVTFLSALSACA 387
M + G + T S SACA
Sbjct: 260 MVLS-GFESDKFTLSSVFSACA 280
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 133/322 (41%), Gaps = 46/322 (14%)
Query: 30 PHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQV 89
P+ S+ + N P G+ + K G N++++ ++ +++K + + A++
Sbjct: 371 PNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRA 430
Query: 90 FDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGR 149
F+ L +K L +YN + + E++ L+ + + FTF+ +L
Sbjct: 431 FESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSG------- 483
Query: 150 NVAPLGDL--GRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNV 207
VA +G + G +H Q++K + + +C AL Y K G I A VF+ M +NV
Sbjct: 484 -VANVGSIRKGEQIHSQVVKLGLSCNQP--VCNALISMYSKCGSIDTASRVFNFMENRNV 540
Query: 208 ISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQR 267
IS TS+I+G+ G A R LE + M
Sbjct: 541 ISWTSMITGFAKHGF--------------------------------AIRVLETFNQMIE 568
Query: 268 LNFRPNISTFASIIGACSMVAAFEVG-QQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVV 326
+PN T+ +I+ ACS V G + S ++ + ++D+ + G +
Sbjct: 569 EGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLT 628
Query: 327 DSRRVFDHM-HQKNVFSWTSMI 347
D+ + M Q +V W + +
Sbjct: 629 DAFEFINTMPFQADVLVWRTFL 650
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 278 bits (710), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 159/475 (33%), Positives = 265/475 (55%), Gaps = 23/475 (4%)
Query: 53 TIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQG 112
+IH+ I++T + + +L+ + + + YA VF + + + Y MI ++ G
Sbjct: 47 SIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSG 106
Query: 113 QVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDV 172
+ + + L R++ + D + + +LKA R + H Q+LK
Sbjct: 107 RSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREI----------HAQVLKLGFGS 156
Query: 173 EKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQK 232
+ L + + Y K+G + A+ +FD M +++ +++T +I+ Y G K+A +FQ
Sbjct: 157 SRSVGL--KMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQD 214
Query: 233 TVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEV 292
KD V + AMI+G + E ++LE++ +MQ N N T ++ ACS + A E+
Sbjct: 215 VKIKDTVCWTAMIDGLVRNKE-MNKALELFREMQMENVSANEFTAVCVLSACSDLGALEL 273
Query: 293 GQQVQS----QLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMID 348
G+ V S Q M+ F +G+ALI+MYS+CG + ++RRVF M K+V S+ +MI
Sbjct: 274 GRWVHSFVENQRMELSNF----VGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMIS 329
Query: 349 GYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKV 408
G +G EA+ F+ M + G PN VT ++ L+AC+H GL+D GLE+F SM+ + V
Sbjct: 330 GLAMHGASVEAINEFRDM-VNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNV 388
Query: 409 KPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAAS 468
+P++EHY C+VDLLGR GRL +A+ F+ +P P+ + LLS+C++HGN E+ + A
Sbjct: 389 EPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAK 448
Query: 469 ELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWVGADS 523
LF+ + N G YV LSN A++ KW +E+RE M++ GI K+ CS + D+
Sbjct: 449 RLFE-SENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDN 502
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 275 bits (704), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 149/478 (31%), Positives = 270/478 (56%), Gaps = 18/478 (3%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLK-------CNCLRYARQVFDDLRDKTLSAYNYM 104
+ IH +L+T + + ++ +LL L + N L YA +F +++ L +N +
Sbjct: 29 KIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLL 88
Query: 105 IGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQ 164
I + + ++ G ++L S D TF ++KAS+ V G H Q
Sbjct: 89 IRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV------GEQTHSQ 142
Query: 165 ILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFK 224
I++ + D + +L Y G IA A +F M ++V+S TS+++GY G+ +
Sbjct: 143 IVR--FGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVE 200
Query: 225 DAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGAC 284
+A +F + +++ ++ MI GY+K + C ++++++ M+R N + S+I +C
Sbjct: 201 NAREMFDEMPHRNLFTWSIMINGYAKNN-CFEKAIDLFEFMKREGVVANETVMVSVISSC 259
Query: 285 SMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWT 344
+ + A E G++ ++K+ ++ LG+AL+DM+ +CG + + VF+ + + + SW+
Sbjct: 260 AHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWS 319
Query: 345 SMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMEN 404
S+I G +G +A+ F +M I G +P VTF + LSAC+H GLV+KGLEI+++M+
Sbjct: 320 SIIKGLAVHGHAHKAMHYFSQM-ISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKK 378
Query: 405 EYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAK 464
++ ++PR+EHY C+VD+LGRAG+L +A F+++M +PN+ + ALL +C+++ NTE+A+
Sbjct: 379 DHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAE 438
Query: 465 LAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWVGAD 522
+ L K+ G YV LSN A A +WD + LR++MKE+ + K S + D
Sbjct: 439 RVGNMLIKVKPE-HSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEID 495
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 275 bits (704), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 157/496 (31%), Positives = 267/496 (53%), Gaps = 22/496 (4%)
Query: 30 PHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQV 89
P ++ N +Q + G+ +H HI +GFVP I +LL +Y KC L AR+V
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 142
Query: 90 FDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGR 149
FD++ ++ L ++N M+ Y + G +EE+ R+L + D ++++ ++
Sbjct: 143 FDEMPNRDLCSWNVMVNGYAEVGLLEEA----RKLFDEMTEKDSYSWTAMVTGYVKKDQP 198
Query: 150 NVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSY------VKNGRIAYARTVFDVMS 203
A + + L V + ++ ++ + ++ G+ + V +
Sbjct: 199 EEALV--------LYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLD 250
Query: 204 EKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYI 263
V+ S SL+ Y G +A IF K V+KD+V + +MI+ Y K+S ++
Sbjct: 251 SDEVLWS-SLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSR-WREGFSLFS 308
Query: 264 DMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCG 323
++ RPN TFA ++ AC+ + E+G+QV + + F + S+L+DMY+KCG
Sbjct: 309 ELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCG 368
Query: 324 RVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSAL 383
+ ++ V D + ++ SWTS+I G +NG PDEAL+ F + ++ G P+ VTF++ L
Sbjct: 369 NIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFD-LLLKSGTKPDHVTFVNVL 427
Query: 384 SACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPN 443
SAC HAGLV+KGLE F S+ ++++ +HY C+VDLL R+GR Q + MP +P+
Sbjct: 428 SACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPS 487
Query: 444 SDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELRE 503
+WA++L C +GN ++A+ AA ELFK+ P YV ++N AAA KW+ ++R+
Sbjct: 488 KFLWASVLGGCSTYGNIDLAEEAAQELFKIEPEN-PVTYVTMANIYAAAGKWEEEGKMRK 546
Query: 504 VMKERGISKDTACSWV 519
M+E G++K SW
Sbjct: 547 RMQEIGVTKRPGSSWT 562
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 65/113 (57%)
Query: 254 CATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGS 313
C + L + + +P ST+ ++I CS A E G++V + + F I + +
Sbjct: 65 CGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWN 124
Query: 314 ALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKM 366
L+ MY+KCG +VD+R+VFD M +++ SW M++GY + G +EA +LF +M
Sbjct: 125 RLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM 177
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 275 bits (703), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 174/520 (33%), Positives = 279/520 (53%), Gaps = 46/520 (8%)
Query: 34 LLSNTLQYYINSDTPSSGQTIHSHILKTGFV-PNTNISIKLLVLYLKCN-----C----- 82
LL++ LQ ++ + G+ IH H+ TGF PNT +S L+ +Y+KC C
Sbjct: 48 LLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQ 107
Query: 83 ---------------------LRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLV 121
L AR VFD + ++ + ++N M+ Y + G + E+L
Sbjct: 108 MHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFY 167
Query: 122 RRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTA 181
+ SG K + F+F+ +L A + R + L R H Q+L A + VL +
Sbjct: 168 KEFRRSGIKFNEFSFAGLLTACVKS--RQL----QLNRQAHGQVLVAGF--LSNVVLSCS 219
Query: 182 LTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVF 241
+ D+Y K G++ A+ FD M+ K++ T+LISGY G + AE +F + +K+ V +
Sbjct: 220 IIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSW 279
Query: 242 NAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLM 301
A+I GY + R+L+++ M L +P TF+S + A + +A+ G+++ ++
Sbjct: 280 TALIAGYVRQGS-GNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMI 338
Query: 302 KTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKN--VFSWTSMIDGYGKNGFPDEA 359
+T + + S+LIDMYSK G + S RVF K+ VF W +MI ++G +A
Sbjct: 339 RTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVF-WNTMISALAQHGLGHKA 397
Query: 360 LELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVV 419
L + M I++ V PN T + L+AC+H+GLV++GL F+SM ++ + P EHYAC++
Sbjct: 398 LRMLDDM-IKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLI 456
Query: 420 DLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRP 479
DLLGRAG + + MP P+ +W A+L CR+HGN E+ K AA EL KL+
Sbjct: 457 DLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPES-S 515
Query: 480 GAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
Y+ LS+ A KW+ V +LR VMK+R ++K+ A SW+
Sbjct: 516 APYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWI 555
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 275 bits (702), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 155/475 (32%), Positives = 263/475 (55%), Gaps = 19/475 (4%)
Query: 49 SSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAY 108
+ G+ +H H++K G N + L+ +Y C + AR VFD + + ++N MI Y
Sbjct: 152 ACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGY 211
Query: 109 LKQGQVEESLGLV---RRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQI 165
+ + EES+ L+ R LVS + T ++L A + + DL + VH +
Sbjct: 212 NRMKEYEESIELLVEMERNLVSPTSV---TLLLVLSACSKVKDK------DLCKRVHEYV 262
Query: 166 LKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKD 225
++ E L AL ++Y G + A +F M ++VIS TS++ GY+ +G K
Sbjct: 263 --SECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKL 320
Query: 226 AECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACS 285
A F + +D + + MI+GY + C SLE++ +MQ P+ T S++ AC+
Sbjct: 321 ARTYFDQMPVRDRISWTIMIDGYLRAG-CFNESLEIFREMQSAGMIPDEFTMVSVLTACA 379
Query: 286 MVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTS 345
+ + E+G+ +++ + K + +G+ALIDMY KCG +++VF M Q++ F+WT+
Sbjct: 380 HLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTA 439
Query: 346 MIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENE 405
M+ G NG EA+++F +MQ + + P+ +T+L LSAC H+G+VD+ + F M ++
Sbjct: 440 MVVGLANNGQGQEAIKVFFQMQ-DMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSD 498
Query: 406 YKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKL 465
++++P + HY C+VD+LGRAG + +A+E + +MP PNS VW ALL + RLH + MA+L
Sbjct: 499 HRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAEL 558
Query: 466 AASELFKLNA-NGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
AA ++ +L NG Y L N A ++W + E+R + + I K S +
Sbjct: 559 AAKKILELEPDNG--AVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLI 611
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 115/490 (23%), Positives = 204/490 (41%), Gaps = 93/490 (18%)
Query: 21 PFLQNHDFVPHSTLLSNTLQYYINSD------------TPSSGQTIHSHILKTGFVPNTN 68
PF N + LL +T+ I++D T + +HS + G PN
Sbjct: 10 PF--NSELSIFKALLMSTITESISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPNPT 67
Query: 69 ISIKLLVLYLKCNCL----RYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRL 124
KL V + C+ L YA ++F + + + +N MI + K E + L +
Sbjct: 68 FQKKLFVFW--CSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNM 125
Query: 125 LVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTD 184
L G D TF +L G G+ +H ++K + + + AL
Sbjct: 126 LKEGVTPDSHTFPFLLNGLKRDGGALAC-----GKKLHCHVVK--FGLGSNLYVQNALVK 178
Query: 185 SYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAM 244
Y G + AR VFD +++V S +N M
Sbjct: 179 MYSLCGLMDMARGVFDRRCKEDVFS-------------------------------WNLM 207
Query: 245 IEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTP 304
I GY++ E S+E+ ++M+R P T ++ ACS V ++ ++V + +
Sbjct: 208 ISGYNRMKE-YEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECK 266
Query: 305 FFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTS------------------- 345
++L +AL++ Y+ CG + + R+F M ++V SWTS
Sbjct: 267 TEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFD 326
Query: 346 ------------MIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVD 393
MIDGY + G +E+LE+F++MQ G++P+ T +S L+ACAH G ++
Sbjct: 327 QMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQ-SAGMIPDEFTMVSVLTACAHLGSLE 385
Query: 394 KGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSS 453
G E ++ ++ K+K + ++D+ + G +A + M +R + W A++
Sbjct: 386 IG-EWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR-DKFTWTAMVVG 443
Query: 454 CRLHGNTEMA 463
+G + A
Sbjct: 444 LANNGQGQEA 453
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 145/304 (47%), Gaps = 21/304 (6%)
Query: 229 IFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASII-GACSMV 287
+F K + D+VV+N MI+G+SK +C + +Y++M + P+ TF ++ G
Sbjct: 90 LFVKIPEPDVVVWNNMIKGWSKV-DCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDG 148
Query: 288 AAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMI 347
A G+++ ++K ++ + +AL+ MYS CG + +R VFD +++VFSW MI
Sbjct: 149 GALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMI 208
Query: 348 DGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYK 407
GY + +E++EL +M+ V P VT L LSAC+ D + + + +E K
Sbjct: 209 SGYNRMKEYEESIELLVEMERNL-VSPTSVTLLLVLSACSKVKDKDLCKRVHEYV-SECK 266
Query: 408 VKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDV--WAALLSSCRLHGNTEMAKL 465
+P + +V+ G ++ A M R DV W +++ GN KL
Sbjct: 267 TEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR---DVISWTSIVKGYVERGNL---KL 320
Query: 466 AASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKD--------TACS 517
A + ++ R + + L A +S+ RE M+ G+ D TAC+
Sbjct: 321 ARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFRE-MQSAGMIPDEFTMVSVLTACA 379
Query: 518 WVGA 521
+G+
Sbjct: 380 HLGS 383
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 156/474 (32%), Positives = 259/474 (54%), Gaps = 19/474 (4%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G IH + KTG + + L+ LYLKC CL +RQ+FD + + +YN MI Y+K
Sbjct: 140 GMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVK 199
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
G + + L + + + L + SMI + ++ G ++A L AD+
Sbjct: 200 CGLIVSARELFDLMPMEMKNLISWN-SMISGYAQTSDGVDIA-----------SKLFADM 247
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
EKD + ++ D YVK+GRI A+ +FDVM ++V++ ++I GY G A+ +F
Sbjct: 248 P-EKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLF 306
Query: 231 QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQR-LNFRPNISTFASIIGACSMVAA 289
+ +D+V +N+M+ GY + ++ +LE++ DM++ + P+ +T ++ A + +
Sbjct: 307 DQMPHRDVVAYNSMMAGYVQ-NKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGR 365
Query: 290 FEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDG 349
+ +++ F+ KLG ALIDMYSKCG + + VF+ + K++ W +MI G
Sbjct: 366 LSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGG 425
Query: 350 YGKNGFPDEALELFQKMQIE-YGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKV 408
+G + A ++ +QIE + P+ +TF+ L+AC+H+GLV +GL F+ M ++K+
Sbjct: 426 LAIHGLGESAFDML--LQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKI 483
Query: 409 KPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAAS 468
+PR++HY C+VD+L R+G + A + MP PN +W L++C H E +L A
Sbjct: 484 EPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAK 543
Query: 469 ELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWVGAD 522
L L A P +YV LSN A+ W V +R +MKER I K CSW+ D
Sbjct: 544 HLI-LQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELD 596
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 89/177 (50%), Gaps = 10/177 (5%)
Query: 276 TFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHM 335
+ + ++ ACS + + G Q+ L KT + + L + LI +Y KCG + SR++FD M
Sbjct: 123 SLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRM 182
Query: 336 HQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAH-AGLVDK 394
+++ S+ SMIDGY K G A ELF M +E + N +++ S +S A + VD
Sbjct: 183 PKRDSVSYNSMIDGYVKCGLIVSARELFDLMPME---MKNLISWNSMISGYAQTSDGVDI 239
Query: 395 GLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALL 451
++F M + + + ++D + GR+ A MP R + WA ++
Sbjct: 240 ASKLFADMPEKDLIS-----WNSMIDGYVKHGRIEDAKGLFDVMPRR-DVVTWATMI 290
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 151/489 (30%), Positives = 265/489 (54%), Gaps = 49/489 (10%)
Query: 77 YLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTF 136
Y+K + AR VF+ + ++ + ++ M+ Y+++G V E+ L R+ E F
Sbjct: 89 YIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMF 148
Query: 137 SMILKASTSTSGR---NVAPLGDL-------------GRIVHVQILKADVDVEKDDVLCT 180
++ R ++ P+ D+ GR+ +++ ++ E++ V T
Sbjct: 149 GGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMR-ERNVVTWT 207
Query: 181 ALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVV 240
+ Y +N R+ AR +F+VM EK +S TS++ GY G +DAE F+ K ++
Sbjct: 208 TMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIA 267
Query: 241 FNAMIEGYSKTSECAT------------------------------RSLEVYIDMQRLNF 270
NAMI G+ + E + +L+++ MQ+
Sbjct: 268 CNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGV 327
Query: 271 RPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRR 330
RP+ + SI+ C+ +A+ + G+QV + L++ F + + S L+ MY KCG +V ++
Sbjct: 328 RPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKL 387
Query: 331 VFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAG 390
VFD K++ W S+I GY +G +EAL++F +M G +PN VT ++ L+AC++AG
Sbjct: 388 VFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMP-SSGTMPNKVTLIAILTACSYAG 446
Query: 391 LVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAAL 450
+++GLEIF+SME+++ V P +EHY+C VD+LGRAG++++A E + M +P++ VW AL
Sbjct: 447 KLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGAL 506
Query: 451 LSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGI 510
L +C+ H ++A++AA +LF+ N G YV LS+ A+ KW V+ +R+ M+ +
Sbjct: 507 LGACKTHSRLDLAEVAAKKLFE-NEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNV 565
Query: 511 SKDTACSWV 519
SK CSW+
Sbjct: 566 SKFPGCSWI 574
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 159/395 (40%), Gaps = 102/395 (25%)
Query: 58 ILKTGFVPNTNISIKLLVLYL-KCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEE 116
IL+ ++ +T ++ + L + + AR+ FD L+ K + ++N ++ Y G +E
Sbjct: 7 ILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKE 66
Query: 117 SLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDD 176
+ L + S RNV
Sbjct: 67 ARQLFDEM----------------------SERNV------------------------- 79
Query: 177 VLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDK 236
V L Y+KN I AR VF++M E+NV+S T+++ GYM +G+ +AE +F + ++
Sbjct: 80 VSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER 139
Query: 237 DIVVFNAMIEGY----------------------SKTSECATRSLEVYIDMQRLNF---- 270
+ V + M G + T+ E +D RL F
Sbjct: 140 NEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMR 199
Query: 271 RPNISTFASIIGACSMVAAFEVGQQV------------QSQLMKTPFFGHIKLG------ 312
N+ T+ ++I +V +++ S L+ G I+
Sbjct: 200 ERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEV 259
Query: 313 ---------SALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELF 363
+A+I + + G + +RRVFD M ++ +W MI Y + GF EAL+LF
Sbjct: 260 MPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLF 319
Query: 364 QKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEI 398
+MQ + GV P+F + +S LS CA + G ++
Sbjct: 320 AQMQ-KQGVRPSFPSLISILSVCATLASLQYGRQV 353
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 152/338 (44%), Gaps = 38/338 (11%)
Query: 190 GRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYS 249
G+I AR FD + K + S S++SGY + GL K+A +F + ++++V +N ++ GY
Sbjct: 31 GKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYI 90
Query: 250 KTSEC--ATRSLEVYIDMQRLNFRPNISTF--ASIIG-ACSMVAAFEVGQQVQSQLMKTP 304
K A E+ + +++ + + ++G A S+ +V +M
Sbjct: 91 KNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGG 150
Query: 305 FF--GHIKLGSALIDMYS---------------KCGRVVDSRRVFDHMHQKNVFSWTSMI 347
G I L DM + GRV ++R +FD M ++NV +WT+MI
Sbjct: 151 LIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMI 210
Query: 348 DGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYK 407
GY +N D A +LF+ M + V++ S L +G ++ E F+ M
Sbjct: 211 TGYRQNNRVDVARKLFEVMPEK-----TEVSWTSMLLGYTLSGRIEDAEEFFEVM----P 261
Query: 408 VKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAA 467
+KP + A +V G G +++A M +R N+ W ++ + G +L A
Sbjct: 262 MKPVIACNAMIVG-FGEVGEISKARRVFDLMEDRDNA-TWRGMIKAYERKG----FELEA 315
Query: 468 SELF-KLNANGRPGAYVALSNTLAAAEKWDSVSELREV 504
+LF ++ G ++ +L + L+ S+ R+V
Sbjct: 316 LDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQV 353
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 11/149 (7%)
Query: 316 IDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPN 375
I S+ G++ ++R+ FD + K + SW S++ GY NG P EA +LF +M N
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSER-----N 78
Query: 376 FVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFV 435
V++ +S ++ + +F+ M V + +V + G + +A
Sbjct: 79 VVSWNGLVSGYIKNRMIVEARNVFELMPERNVVS-----WTAMVKGYMQEGMVGEAESLF 133
Query: 436 MRMPERPNSDVWAALLSSCRLHGNTEMAK 464
RMPER N W + G + A+
Sbjct: 134 WRMPER-NEVSWTVMFGGLIDDGRIDKAR 161
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ +H+H+++ F + ++ L+ +Y+KC L A+ VFD K + +N +I Y
Sbjct: 350 GRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYAS 409
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKAST 144
G EE+L + + SG + T IL A +
Sbjct: 410 HGLGEEALKIFHEMPSSGTMPNKVTLIAILTACS 443
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 273 bits (699), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 156/490 (31%), Positives = 254/490 (51%), Gaps = 41/490 (8%)
Query: 30 PHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQV 89
P S++ + L+ +N G+ IH+H+++ G NT+I ++ +Y+KC L A++V
Sbjct: 182 PPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRV 241
Query: 90 FDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGR 149
FD + K A ++ Y + G+ ++L L L+ G + D F FS++LKA S
Sbjct: 242 FDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEEL 301
Query: 150 NVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVIS 209
N LG+ +H + A + +E + + T L D Y+K A F + E N +S
Sbjct: 302 N------LGKQIHACV--AKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVS 353
Query: 210 STSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLN 269
+++ISGY F++A F+ K+ + N+
Sbjct: 354 WSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSF------------------------- 388
Query: 270 FRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSR 329
T+ SI ACS++A +G QV + +K G SALI MYSKCG + D+
Sbjct: 389 ------TYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAN 442
Query: 330 RVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHA 389
VF+ M ++ +WT+ I G+ G EAL LF+KM + G+ PN VTF++ L+AC+HA
Sbjct: 443 EVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKM-VSCGMKPNSVTFIAVLTACSHA 501
Query: 390 GLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAA 449
GLV++G +M +Y V P ++HY C++D+ R+G L++A +F+ MP P++ W
Sbjct: 502 GLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKC 561
Query: 450 LLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERG 509
LS C H N E+ ++A EL +L+ G YV N A KW+ +E+ ++M ER
Sbjct: 562 FLSGCWTHKNLELGEIAGEELRQLDPEDTAG-YVLPFNLYTWAGKWEEAAEMMKLMNERM 620
Query: 510 ISKDTACSWV 519
+ K+ +CSW+
Sbjct: 621 LKKELSCSWI 630
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 160/376 (42%), Gaps = 70/376 (18%)
Query: 110 KQGQVE--------------ESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLG 155
KQGQVE E+ ++ + +G + +++ + +A R + L
Sbjct: 46 KQGQVENLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEAC-----RELRSLS 100
Query: 156 DLGRIVHVQILKADVDVEKDDVLC-TALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLI 214
GR++H ++ + +E VL + Y + + A +FD MSE N +S T++I
Sbjct: 101 H-GRLLHDRM---RMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMI 156
Query: 215 SGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNI 274
S Y QG+ +DK + +F+ M+ K P
Sbjct: 157 SAYAEQGI-----------LDKAVGLFSGMLASGDK---------------------PPS 184
Query: 275 STFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDH 334
S + +++ + A + G+Q+ + +++ + + + +++MY KCG +V ++RVFD
Sbjct: 185 SMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQ 244
Query: 335 MHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDK 394
M K + T ++ GY + G +AL+LF + E GV + F L ACA ++
Sbjct: 245 MAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTE-GVEWDSFVFSVVLKACASLEELNL 303
Query: 395 GLEIFQ-----SMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAA 449
G +I +E+E V + VD + A + E PN W+A
Sbjct: 304 GKQIHACVAKLGLESEVSVGTPL------VDFYIKCSSFESACRAFQEIRE-PNDVSWSA 356
Query: 450 LLSS-CRLHGNTEMAK 464
++S C++ E K
Sbjct: 357 IISGYCQMSQFEEAVK 372
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 168/539 (31%), Positives = 269/539 (49%), Gaps = 93/539 (17%)
Query: 30 PHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQV 89
P + L N L + T S G+ +H + + + N + L+ +Y KC + A V
Sbjct: 227 PDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTV 286
Query: 90 FDDLRDKTLSAYNYMIGAYLKQGQVE---------------------------------- 115
F ++ K + ++N M+ Y + G+ E
Sbjct: 287 FSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLG 346
Query: 116 -ESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDL--GRIVHVQILKADVDV 172
E+LG+ R++L SG K + T +L S +G L G+ +H +K +D+
Sbjct: 347 YEALGVCRQMLSSGIKPNEVTLISVLSGCAS--------VGALMHGKEIHCYAIKYPIDL 398
Query: 173 EK-----DDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAE 227
K ++++ L D Y K ++ AR +FD +S K
Sbjct: 399 RKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPK---------------------- 436
Query: 228 CIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDM--QRLNFRPNISTFASIIGACS 285
++D+V + MI GYS+ + A ++LE+ +M + RPN T + + AC+
Sbjct: 437 -------ERDVVTWTVMIGGYSQHGD-ANKALELLSEMFEEDCQTRPNAFTISCALVACA 488
Query: 286 MVAAFEVGQQVQSQLMK-----TPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNV 340
+AA +G+Q+ + ++ P F + + LIDMY+KCG + D+R VFD+M KN
Sbjct: 489 SLAALRIGKQIHAYALRNQQNAVPLF----VSNCLIDMYAKCGSISDARLVFDNMMAKNE 544
Query: 341 FSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQ 400
+WTS++ GYG +G+ +EAL +F +M+ G + VT L L AC+H+G++D+G+E F
Sbjct: 545 VTWTSLMTGYGMHGYGEEALGIFDEMR-RIGFKLDGVTLLVVLYACSHSGMIDQGMEYFN 603
Query: 401 SMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNT 460
M+ + V P EHYAC+VDLLGRAGRLN A + MP P VW A LS CR+HG
Sbjct: 604 RMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKV 663
Query: 461 EMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
E+ + AA ++ +L +N G+Y LSN A A +W V+ +R +M+ +G+ K CSWV
Sbjct: 664 ELGEYAAEKITELASN-HDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWV 721
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 213/429 (49%), Gaps = 27/429 (6%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G++ H+ L TGF+ N + L+ +Y +C L AR+VFD++ + ++N +I +Y K
Sbjct: 146 GESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAK 205
Query: 111 QGQVEESLGLVRRLLVS-GEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKAD 169
G+ + +L + R+ G + D T +L S + LG+ +H + ++
Sbjct: 206 LGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHS------LGKQLHCFAVTSE 259
Query: 170 VDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECI 229
+ ++ + L D Y K G + A TVF MS K+V+S ++++GY G F+DA +
Sbjct: 260 MI--QNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRL 317
Query: 230 FQK----TVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACS 285
F+K + D+V ++A I GY++ +L V M +PN T S++ C+
Sbjct: 318 FEKMQEEKIKMDVVTWSAAISGYAQRG-LGYEALGVCRQMLSSGIKPNEVTLISVLSGCA 376
Query: 286 MVAAFEVGQQVQSQLMKTPF----FGHIK---LGSALIDMYSKCGRVVDSRRVFDHM--H 336
V A G+++ +K P GH + + LIDMY+KC +V +R +FD +
Sbjct: 377 SVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPK 436
Query: 337 QKNVFSWTSMIDGYGKNGFPDEALELFQKM-QIEYGVVPNFVTFLSALSACAHAGLVDKG 395
+++V +WT MI GY ++G ++ALEL +M + + PN T AL ACA + G
Sbjct: 437 ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIG 496
Query: 396 LEIFQ-SMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSC 454
+I ++ N+ P C++D+ + G ++ A V N W +L++
Sbjct: 497 KQIHAYALRNQQNAVPLFVS-NCLIDMYAKCGSISDA-RLVFDNMMAKNEVTWTSLMTGY 554
Query: 455 RLHGNTEMA 463
+HG E A
Sbjct: 555 GMHGYGEEA 563
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 118/224 (52%), Gaps = 4/224 (1%)
Query: 210 STSLISGYMNQGLFKDAECIFQKTVDKDIVVF--NAMIEGYSKTSECATRSLEVYIDMQR 267
++ LIS Y++ G A + ++ D V+ N++I Y CA + L ++ M
Sbjct: 62 TSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNG-CANKCLYLFGLMHS 120
Query: 268 LNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVD 327
L++ P+ TF + AC +++ G+ + + T F ++ +G+AL+ MYS+C + D
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSD 180
Query: 328 SRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACA 387
+R+VFD M +V SW S+I+ Y K G P ALE+F +M E+G P+ +T ++ L CA
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240
Query: 388 HAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQA 431
G G ++ ++ M C+VD+ + G +++A
Sbjct: 241 SLGTHSLGKQL-HCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEA 283
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 273 bits (697), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 167/520 (32%), Positives = 275/520 (52%), Gaps = 45/520 (8%)
Query: 3 NGILRPFFSSRALFSPHQPF--LQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILK 60
N ++ F+ S + F +++ F P+S L+ + G+ IH +K
Sbjct: 177 NTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVK 236
Query: 61 TGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGL 120
GF + ++ L+ +Y KC+CL AR+VF + K+L A+N MI Y+ +G + + +
Sbjct: 237 KGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEI 296
Query: 121 VRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCT 180
+ R+++ G + T + IL A + + RN+ G+ +H ++++ V+ D +
Sbjct: 297 LNRMIIEGTRPSQTTLTSILMACSRS--RNLLH----GKFIHGYVIRSVVNA--DIYVNC 348
Query: 181 ALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVV 240
+L D Y K G A TVF ++K+V S
Sbjct: 349 SLIDLYFKCGEANLAETVFS-KTQKDVAES------------------------------ 377
Query: 241 FNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQL 300
+N MI Y +++EVY M + +P++ TF S++ ACS +AA E G+Q+ +
Sbjct: 378 WNVMISSYISVGN-WFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSI 436
Query: 301 MKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEAL 360
++ L SAL+DMYSKCG ++ R+F+ + +K+V SWT MI YG +G P EAL
Sbjct: 437 SESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREAL 496
Query: 361 ELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVD 420
F +MQ ++G+ P+ VT L+ LSAC HAGL+D+GL+ F M ++Y ++P +EHY+C++D
Sbjct: 497 YQFDEMQ-KFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMID 555
Query: 421 LLGRAGRLNQAWEFVMRMPERP-NSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRP 479
+LGRAGRL +A+E + + PE N+++ + L S+C LH + A L + N
Sbjct: 556 ILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVE-NYPDDA 614
Query: 480 GAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
Y+ L N A+ E WD+ +R MKE G+ K CSW+
Sbjct: 615 STYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWI 654
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 185/404 (45%), Gaps = 45/404 (11%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKT-LSAYNYMIGAYLK 110
+ +H IL G + + L+ +Y C AR VF++ ++ + +N ++ Y K
Sbjct: 24 KLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSK 83
Query: 111 QGQVEESLGLVRRLL-VSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKAD 169
++L + +RLL S D FTF ++KA + GR LGR++H +
Sbjct: 84 NSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGAL-GREF-----LGRMIHTLV---- 133
Query: 170 VDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECI 229
VK+G + +V+ ++SL+ Y LF+++ +
Sbjct: 134 -----------------VKSGYVC------------DVVVASSLVGMYAKFNLFENSLQV 164
Query: 230 FQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAA 289
F + ++D+ +N +I + ++ E A ++LE++ M+ F PN + I ACS +
Sbjct: 165 FDEMPERDVASWNTVISCFYQSGE-AEKALELFGRMESSGFEPNSVSLTVAISACSRLLW 223
Query: 290 FEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDG 349
E G+++ + +K F + SAL+DMY KC + +R VF M +K++ +W SMI G
Sbjct: 224 LERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKG 283
Query: 350 YGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVK 409
Y G +E+ +M IE G P+ T S L AC+ + + G + V
Sbjct: 284 YVAKGDSKSCVEILNRMIIE-GTRPSQTTLTSILMACSRSRNLLHG-KFIHGYVIRSVVN 341
Query: 410 PRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSS 453
+ ++DL + G N A E V ++ ++ W ++SS
Sbjct: 342 ADIYVNCSLIDLYFKCGEANLA-ETVFSKTQKDVAESWNVMISS 384
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 271 bits (694), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 266/472 (56%), Gaps = 22/472 (4%)
Query: 57 HILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEE 116
H V + SI LV ++ + +R A +VFD++ + + + +IG ++K+ + E
Sbjct: 17 HSSANALVTKSPNSIPELVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVE 76
Query: 117 SLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDD 176
+ +RLL G + + FTF ++ +ST+ R+V LG+ +H LK + + +
Sbjct: 77 ASQAFKRLLCLGIRPNEFTFGTVI--GSSTTSRDV----KLGKQLHCYALK--MGLASNV 128
Query: 177 VLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDK 236
+ +A+ + YVK + AR FD + NV+S T+LISGY+ + F++A +F+ ++
Sbjct: 129 FVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPER 188
Query: 237 DIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFR-PNISTFASIIGACSMVAAFEVGQQ 295
+V +NA+I G+S+T ++ ++DM R PN STF I A S +A+ G+
Sbjct: 189 SVVTWNAVIGGFSQTGR-NEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKS 247
Query: 296 VQSQLMKTPFFG---HIKLGSALIDMYSKCGRVVDSRRVFDHMH--QKNVFSWTSMIDGY 350
+ + +K F G ++ + ++LI YSKCG + DS F+ + Q+N+ SW SMI GY
Sbjct: 248 IHACAIK--FLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGY 305
Query: 351 GKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKP 410
NG +EA+ +F+KM + + PN VT L L AC HAGL+ +G F N+Y P
Sbjct: 306 AHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD-DP 364
Query: 411 ---RMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAA 467
+EHYAC+VD+L R+GR +A E + MP P W ALL C++H N +AKLAA
Sbjct: 365 NLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAA 424
Query: 468 SELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
S++ +L+ +YV LSN +A E W +VS +R MKE G+ + T CSW+
Sbjct: 425 SKILELDPRD-VSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWI 475
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 145/329 (44%), Gaps = 30/329 (9%)
Query: 38 TLQYYINSDTPSS----GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDL 93
T I S T S G+ +H + LK G N + +L Y+K + L AR+ FDD
Sbjct: 95 TFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDT 154
Query: 94 RDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAP 153
RD + + +I YLK+ + EE+L L R + + T++ ++ S +GRN
Sbjct: 155 RDPNVVSITNLISGYLKKHEFEEALSLFRAM----PERSVVTWNAVI-GGFSQTGRNEEA 209
Query: 154 LGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKN------GRIAYARTVFDVMSEKNV 207
+ V +L+ V + + A+T + N G+ +A + + NV
Sbjct: 210 VNTF-----VDMLREGVVIPNESTFPCAIT--AISNIASHGAGKSIHACAIKFLGKRFNV 262
Query: 208 ISSTSLISGYMNQGLFKDAECIFQKTVD--KDIVVFNAMIEGYSKTSECATRSLEVYIDM 265
SLIS Y G +D+ F K + ++IV +N+MI GY+ ++ ++ M
Sbjct: 263 FVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGR-GEEAVAMFEKM 321
Query: 266 QR-LNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMK---TPFFGHIKLGSALIDMYSK 321
+ N RPN T ++ AC+ + G ++ + P ++ + ++DM S+
Sbjct: 322 VKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSR 381
Query: 322 CGRVVDSRRVFDHMH-QKNVFSWTSMIDG 349
GR ++ + M + W +++ G
Sbjct: 382 SGRFKEAEELIKSMPLDPGIGFWKALLGG 410
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 271 bits (693), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 160/482 (33%), Positives = 255/482 (52%), Gaps = 58/482 (12%)
Query: 49 SSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAY 108
S +H HIL G + ++ KL+ +Y + YAR+VFD R +T+ +N + A
Sbjct: 94 SDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRAL 153
Query: 109 LKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTS--------GRNV-APLGDLGR 159
G EE LGL ++ G + D FT++ +LKA ++ G+ + A L G
Sbjct: 154 TLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGY 213
Query: 160 IVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMN 219
HV I+ T L D Y + G + YA VF M +NV+S
Sbjct: 214 SSHVYIM-------------TTLVDMYARFGCVDYASYVFGGMPVRNVVS---------- 250
Query: 220 QGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQR--LNFRPNISTF 277
++AMI Y+K + A +L + +M R + PN T
Sbjct: 251 ---------------------WSAMIACYAKNGK-AFEALRTFREMMRETKDSSPNSVTM 288
Query: 278 ASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQ 337
S++ AC+ +AA E G+ + +++ + + SAL+ MY +CG++ +RVFD MH
Sbjct: 289 VSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHD 348
Query: 338 KNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLE 397
++V SW S+I YG +G+ +A+++F++M + G P VTF+S L AC+H GLV++G
Sbjct: 349 RDVVSWNSLISSYGVHGYGKKAIQIFEEM-LANGASPTPVTFVSVLGACSHEGLVEEGKR 407
Query: 398 IFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLH 457
+F++M ++ +KP++EHYAC+VDLLGRA RL++A + V M P VW +LL SCR+H
Sbjct: 408 LFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIH 467
Query: 458 GNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACS 517
GN E+A+ A+ LF L G YV L++ A A+ WD V ++++++ RG+ K
Sbjct: 468 GNVELAERASRRLFALEPKN-AGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRC 526
Query: 518 WV 519
W+
Sbjct: 527 WM 528
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 59/121 (48%)
Query: 24 QNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCL 83
+ D P+S + + LQ + G+ IH +IL+ G + L+ +Y +C L
Sbjct: 277 ETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKL 336
Query: 84 RYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKAS 143
++VFD + D+ + ++N +I +Y G ++++ + +L +G TF +L A
Sbjct: 337 EVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGAC 396
Query: 144 T 144
+
Sbjct: 397 S 397
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 271 bits (693), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 152/469 (32%), Positives = 259/469 (55%), Gaps = 43/469 (9%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ +H+HIL++ F + + LL +Y KC L AR+VF+ + + + +I Y +
Sbjct: 79 GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
+ ++L ++L G + FT S ++KA+ + G G +H +K
Sbjct: 139 HDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAER------RGCCGHQLHGFCVKCGF 192
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
D + + +AL D Y + G + A+ VFD + +N +S
Sbjct: 193 D--SNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS--------------------- 229
Query: 231 QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAF 290
+NA+I G+++ S ++LE++ M R FRP+ ++AS+ GACS
Sbjct: 230 ----------WNALIAGHARRS-GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFL 278
Query: 291 EVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGY 350
E G+ V + ++K+ G+ L+DMY+K G + D+R++FD + +++V SW S++ Y
Sbjct: 279 EQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAY 338
Query: 351 GKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKP 410
++GF EA+ F++M+ G+ PN ++FLS L+AC+H+GL+D+G ++ M+ + + P
Sbjct: 339 AQHGFGKEAVWWFEEMR-RVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVP 396
Query: 411 RMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASEL 470
HY VVDLLGRAG LN+A F+ MP P + +W ALL++CR+H NTE+ AA +
Sbjct: 397 EAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHV 456
Query: 471 FKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
F+L+ + PG +V L N A+ +W+ + +R+ MKE G+ K+ ACSWV
Sbjct: 457 FELDPDD-PGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWV 504
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 151/360 (41%), Gaps = 77/360 (21%)
Query: 28 FVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYAR 87
+ P+ LS+ ++ G +H +K GF N ++ LL LY + + A+
Sbjct: 157 YSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQ 216
Query: 88 QVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTS 147
VFD L + ++N +I + ++ E++L L + +L G + F+++ + A +ST
Sbjct: 217 LVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTG 276
Query: 148 GRNVAPLGDLGRIVHVQILKADVDVEKDDVLC-TALTDSYVKNGRIAYARTVFDVMSEKN 206
+ G+ VH ++K+ EK L D Y K+G I AR +FD +++++
Sbjct: 277 ------FLEQGKWVHAYMIKSG---EKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRD 327
Query: 207 VISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQ 266
V+S SL++ Y G K+A F+ +M+
Sbjct: 328 VVSWNSLLTAYAQHGFGKEAVWWFE--------------------------------EMR 355
Query: 267 RLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVV 326
R+ RPN +F S++ ACS + G +LMK K G V
Sbjct: 356 RVGIRPNEISFLSVLTACSHSGLLDEGWHYY-ELMK------------------KDGIVP 396
Query: 327 DSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSAC 386
++ + + +++D G+ G + AL ++M IE P + + L+AC
Sbjct: 397 EA------------WHYVTVVDLLGRAGDLNRALRFIEEMPIE----PTAAIWKALLNAC 440
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 104/213 (48%), Gaps = 19/213 (8%)
Query: 277 FASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMH 336
+ +++ C++ G+ V + ++++ F I +G+ L++MY+KCG + ++R+VF+ M
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 337 QKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAH-----AGL 391
Q++ +WT++I GY ++ P +AL F +M + +G PN T S + A A G
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQM-LRFGYSPNEFTLSSVIKAAAAERRGCCGH 181
Query: 392 VDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALL 451
G + ++ V + ++DL R G ++ A + V E N W AL+
Sbjct: 182 QLHGFCVKCGFDSNVHVG------SALLDLYTRYGLMDDA-QLVFDALESRNDVSWNALI 234
Query: 452 SSCRLHGNTEMAKLAASELFK--LNANGRPGAY 482
+ TE A ELF+ L RP +
Sbjct: 235 AGHARRSGTE----KALELFQGMLRDGFRPSHF 263
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 270 bits (691), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 160/498 (32%), Positives = 277/498 (55%), Gaps = 44/498 (8%)
Query: 30 PHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFV-PNTNISIKLLVLYLKCNCLRYARQ 88
P +S+ L + + +G+ +H++ LK G + N+ + L+ +Y C + R+
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 359
Query: 89 VFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSG 148
VFD + D+ + +N MI Y + +E+L L + E+ G +L ST+ +G
Sbjct: 360 VFDGMFDRKIGLWNAMIAGYSQNEHDKEAL----LLFIGMEESAG-----LLANSTTMAG 410
Query: 149 RNVAPL----GDLGR--IVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVM 202
V P G R +H ++K +D +D + L D Y + G+I A +F M
Sbjct: 411 --VVPACVRSGAFSRKEAIHGFVVKRGLD--RDRFVQNTLMDMYSRLGKIDIAMRIFGKM 466
Query: 203 SEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVY 262
++++++ ++I+GY +F + + +++ + M K S+ A+
Sbjct: 467 EDRDLVTWNTMITGY-----------VFSEHHEDALLLLHKMQNLERKVSKGAS------ 509
Query: 263 IDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKC 322
R++ +PN T +I+ +C+ ++A G+++ + +K + +GSAL+DMY+KC
Sbjct: 510 ----RVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKC 565
Query: 323 GRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSA 382
G + SR+VFD + QKNV +W +I YG +G EA++L + M ++ GV PN VTF+S
Sbjct: 566 GCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQ-GVKPNEVTFISV 624
Query: 383 LSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERP 442
+AC+H+G+VD+GL IF M+ +Y V+P +HYACVVDLLGRAGR+ +A++ + MP
Sbjct: 625 FAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDF 684
Query: 443 N-SDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSEL 501
N + W++LL + R+H N E+ ++AA L +L N YV L+N ++A WD +E+
Sbjct: 685 NKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPN-VASHYVLLANIYSSAGLWDKATEV 743
Query: 502 REVMKERGISKDTACSWV 519
R MKE+G+ K+ CSW+
Sbjct: 744 RRNMKEQGVRKEPGCSWI 761
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 175/399 (43%), Gaps = 53/399 (13%)
Query: 51 GQTIHSHILKTGF-VPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYL 109
G+ IH+H+ K G+ V + ++ L+ LY KC +VFD + ++ ++N +I +
Sbjct: 116 GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC 175
Query: 110 KQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLG-DLGRIVHVQILKA 168
+ E +L R +L + FT ++ A ++ P G +G+ VH L+
Sbjct: 176 SFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLP----MPEGLMMGKQVHAYGLRK 231
Query: 169 DVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAEC 228
E + + L Y K G++A ++ + G F
Sbjct: 232 G---ELNSFIINTLVAMYGKLGKLASSKVLL---------------------GSFGG--- 264
Query: 229 IFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVA 288
+D+V +N ++ + +E +LE +M P+ T +S++ ACS +
Sbjct: 265 -------RDLVTWNTVLSSLCQ-NEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLE 316
Query: 289 AFEVGQQVQSQLMKTPFFGHIK-LGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMI 347
G+++ + +K +GSAL+DMY C +V+ RRVFD M + + W +MI
Sbjct: 317 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMI 376
Query: 348 DGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDK-----GLEIFQSM 402
GY +N EAL LF M+ G++ N T + AC +G + G + + +
Sbjct: 377 AGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL 436
Query: 403 ENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPER 441
+ + V+ + +D+ R G+++ A +M +R
Sbjct: 437 DRDRFVQNTL------MDMYSRLGKIDIAMRIFGKMEDR 469
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 122/280 (43%), Gaps = 48/280 (17%)
Query: 124 LLVSGEKLDGFTFSMILKASTSTSGRNVAPLGD--LGRIVHVQILKADVDVEKDDVLCTA 181
++V G K D + F +LKA VA L D LG+ +H + K V+ V T
Sbjct: 88 MIVLGIKPDNYAFPALLKA--------VADLQDMELGKQIHAHVYKFGYGVDSVTVANT- 138
Query: 182 LTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVF 241
L + Y K G VFD +SE+N +S SLIS C F+K
Sbjct: 139 LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSL----------CSFEKW-------- 180
Query: 242 NAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACS---MVAAFEVGQQVQS 298
+LE + M N P+ T S++ ACS M +G+QV +
Sbjct: 181 --------------EMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHA 226
Query: 299 QLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDE 358
++ + + L+ MY K G++ S+ + +++ +W +++ +N E
Sbjct: 227 YGLRKGELNSFIINT-LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLE 285
Query: 359 ALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEI 398
ALE ++M +E GV P+ T S L AC+H ++ G E+
Sbjct: 286 ALEYLREMVLE-GVEPDEFTISSVLPACSHLEMLRTGKEL 324
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 72/131 (54%), Gaps = 8/131 (6%)
Query: 262 YIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGH----IKLGSALID 317
Y+DM L +P+ F +++ A + + E+G+Q+ + + K FG+ + + + L++
Sbjct: 85 YVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYK---FGYGVDSVTVANTLVN 141
Query: 318 MYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFV 377
+Y KCG +VFD + ++N SW S+I + ALE F+ M ++ V P+
Sbjct: 142 LYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCM-LDENVEPSSF 200
Query: 378 TFLSALSACAH 388
T +S ++AC++
Sbjct: 201 TLVSVVTACSN 211
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 169/501 (33%), Positives = 276/501 (55%), Gaps = 29/501 (5%)
Query: 28 FVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYAR 87
+PH + LQ + T ++ + +H+HI+K G V ++ L+ +Y KC +A
Sbjct: 2 LIPHYL---HQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHAL 58
Query: 88 QVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGE-KLDGFTFSMILKASTST 146
QVFD++ + A+ ++ A + ++L + + S + D F FS ++KA
Sbjct: 59 QVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKA---- 114
Query: 147 SGRNVAPLG--DLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSE 204
A LG D GR VH + ++ D+V+ ++L D Y K G + A+ VFD +
Sbjct: 115 ----CANLGSIDHGRQVHCHFIVSEY--ANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRV 168
Query: 205 KNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYID 264
KN IS T+++SGY G ++A +F+ K++ + A+I G+ ++ + + V+ +
Sbjct: 169 KNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGK-GLEAFSVFTE 227
Query: 265 MQRLNFRPNIS---TFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSK 321
M+R R +I +SI+GAC+ +AA G+QV ++ F + + +ALIDMY+K
Sbjct: 228 MRRE--RVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAK 285
Query: 322 CGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLS 381
C V+ ++ +F M ++V SWTS+I G ++G ++AL L+ M + +GV PN VTF+
Sbjct: 286 CSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDM-VSHGVKPNEVTFVG 344
Query: 382 ALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPER 441
+ AC+H G V+KG E+FQSM +Y ++P ++HY C++DLLGR+G L++A + MP
Sbjct: 345 LIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFP 404
Query: 442 PNSDVWAALLSSCRLHGNTEMAKLAASEL---FKLNANGRPGAYVALSNTLAAAEKWDSV 498
P+ WAALLS+C+ G +M A L FKL P Y+ LSN A+A W V
Sbjct: 405 PDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLK---DPSTYILLSNIYASASLWGKV 461
Query: 499 SELREVMKERGISKDTACSWV 519
SE R + E + KD S V
Sbjct: 462 SEARRKLGEMEVRKDPGHSSV 482
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 155/502 (30%), Positives = 254/502 (50%), Gaps = 74/502 (14%)
Query: 49 SSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAY 108
S G+ IH ++K GF + LL +Y C+ A++VF L D+ YN ++G
Sbjct: 156 SLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGL 215
Query: 109 LKQGQVEESLGLVR------------------------------RLLVSGEKLDGFTFSM 138
L G +E++L L R + V G K+D + F
Sbjct: 216 LACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGS 275
Query: 139 ILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDV-LCTALTDSYVKNGRIAYART 197
+L A N G+ +H I++ + +D + + +AL D Y K + YA+T
Sbjct: 276 VLPACGGLGAINE------GKQIHACIIRTNF---QDHIYVGSALIDMYCKCKCLHYAKT 326
Query: 198 VFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATR 257
VFD M +KN +V + AM+ GY +T A
Sbjct: 327 VFDRMKQKN-------------------------------VVSWTAMVVGYGQTGR-AEE 354
Query: 258 SLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALID 317
++++++DMQR P+ T I AC+ V++ E G Q + + + ++ + ++L+
Sbjct: 355 AVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVT 414
Query: 318 MYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFV 377
+Y KCG + DS R+F+ M+ ++ SWT+M+ Y + G E ++LF KM +++G+ P+ V
Sbjct: 415 LYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKM-VQHGLKPDGV 473
Query: 378 TFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMR 437
T +SAC+ AGLV+KG F+ M +EY + P + HY+C++DL R+GRL +A F+
Sbjct: 474 TLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFING 533
Query: 438 MPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDS 497
MP P++ W LLS+CR GN E+ K AA L +L+ + P Y LS+ A+ KWDS
Sbjct: 534 MPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPH-HPAGYTLLSSIYASKGKWDS 592
Query: 498 VSELREVMKERGISKDTACSWV 519
V++LR M+E+ + K+ SW+
Sbjct: 593 VAQLRRGMREKNVKKEPGQSWI 614
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/436 (28%), Positives = 218/436 (50%), Gaps = 49/436 (11%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQ 111
+ IH +I++ P T + ++ Y YAR+VFD + L ++N ++ AY K
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 112 GQVEE----------SLGLVRRLLVSGEKLDGFTFSMILKAST----------------- 144
G + E G+ +L+ G L G + + +T
Sbjct: 86 GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTM 145
Query: 145 ---STSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDV 201
S+S +V+ LG+ +H Q++K + E ++ + L Y G I+ A+ VF
Sbjct: 146 LKLSSSNGHVS----LGKQIHGQVIK--LGFESYLLVGSPLLYMYANVGCISDAKKVFYG 199
Query: 202 MSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEV 261
+ ++N + SL+ G + G+ +DA +F + ++KD V + AMI+G ++ A ++E
Sbjct: 200 LDDRNTVMYNSLMGGLLACGMIEDALQLF-RGMEKDSVSWAAMIKGLAQNG-LAKEAIEC 257
Query: 262 YIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSK 321
+ +M+ + + F S++ AC + A G+Q+ + +++T F HI +GSALIDMY K
Sbjct: 258 FREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCK 317
Query: 322 CGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLS 381
C + ++ VFD M QKNV SWT+M+ GYG+ G +EA+++F MQ G+ P+ T
Sbjct: 318 CKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQ-RSGIDPDHYTLGQ 376
Query: 382 ALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACV----VDLLGRAGRLNQAWEFVMR 437
A+SACA+ +++G S + + + HY V V L G+ G ++ +
Sbjct: 377 AISACANVSSLEEG-----SQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNE 431
Query: 438 MPERPNSDVWAALLSS 453
M R ++ W A++S+
Sbjct: 432 MNVR-DAVSWTAMVSA 446
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 90/200 (45%), Gaps = 8/200 (4%)
Query: 23 LQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNC 82
+Q P L + N + G H + +G + +S L+ LY KC
Sbjct: 362 MQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGD 421
Query: 83 LRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKA 142
+ + ++F+++ + ++ M+ AY + G+ E++ L +++ G K DG T + ++ A
Sbjct: 422 IDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISA 481
Query: 143 STSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVM 202
+ A L + G+ + +++ ++ + + + D + ++GR+ A + M
Sbjct: 482 CSR------AGLVEKGQ-RYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGM 534
Query: 203 S-EKNVISSTSLISGYMNQG 221
+ I T+L+S N+G
Sbjct: 535 PFPPDAIGWTTLLSACRNKG 554
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 269 bits (687), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 162/492 (32%), Positives = 269/492 (54%), Gaps = 12/492 (2%)
Query: 22 FLQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCN 81
+++ + P+S + + + +G+ +++ I +G N + L+ +Y+KCN
Sbjct: 226 MVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCN 285
Query: 82 CLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILK 141
+ A+++FD+ L N M Y++QG E+LG+ ++ SG + D SM+
Sbjct: 286 AIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPD--RISMLSA 343
Query: 142 ASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDV 201
S+ + RN+ G+ H +L+ E D +C AL D Y+K R A +FD
Sbjct: 344 ISSCSQLRNIL----WGKSCHGYVLRNGF--ESWDNICNALIDMYMKCHRQDTAFRIFDR 397
Query: 202 MSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEV 261
MS K V++ S+++GY+ G A F+ +K+IV +N +I G + S ++EV
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGS-LFEEAIEV 456
Query: 262 YIDMQ-RLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYS 320
+ MQ + + T SI AC + A ++ + + + K ++LG+ L+DM+S
Sbjct: 457 FCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFS 516
Query: 321 KCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFL 380
+CG + +F+ + ++V +WT+ I G + A+ELF M IE G+ P+ V F+
Sbjct: 517 RCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDM-IEQGLKPDGVAFV 575
Query: 381 SALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPE 440
AL+AC+H GLV +G EIF SM + V P HY C+VDLLGRAG L +A + + MP
Sbjct: 576 GALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPM 635
Query: 441 RPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSE 500
PN +W +LL++CR+ GN EMA AA E ++ A R G+YV LSN A+A +W+ +++
Sbjct: 636 EPNDVIWNSLLAACRVQGNVEMAAYAA-EKIQVLAPERTGSYVLLSNVYASAGRWNDMAK 694
Query: 501 LREVMKERGISK 512
+R MKE+G+ K
Sbjct: 695 VRLSMKEKGLRK 706
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 189/433 (43%), Gaps = 46/433 (10%)
Query: 1 MNNGILRPFFSSRALFSPHQPFLQ--NHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHI 58
M N ++R + SS FL+ N P L S +G IH I
Sbjct: 101 MYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 59 LKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESL 118
+K G+ + + L+ Y +C L AR+VFD++ ++ + ++ MI Y ++ ++++
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 119 GLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVL 178
L R +V E++ + +M+ S A L DL V + +E +D++
Sbjct: 221 DLFFR-MVRDEEVTPNSVTMVCVISA------CAKLEDLETGEKVYAFIRNSGIEVNDLM 273
Query: 179 CTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDI 238
+AL D Y+K I A+ +FD N+ ++ S Y+ QGL ++A +
Sbjct: 274 VSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREA-----------L 322
Query: 239 VVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQS 298
VFN M++ RP+ + S I +CS + G+
Sbjct: 323 GVFNLMMDS---------------------GVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 299 QLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDE 358
+++ F + +ALIDMY KC R + R+FD M K V +W S++ GY +NG D
Sbjct: 362 YVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDA 421
Query: 359 ALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACV 418
A E F+ M + N V++ + +S L ++ +E+F SM+++ V +
Sbjct: 422 AWETFETMPEK-----NIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSI 476
Query: 419 VDLLGRAGRLNQA 431
G G L+ A
Sbjct: 477 ASACGHLGALDLA 489
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 186/443 (41%), Gaps = 75/443 (16%)
Query: 44 NSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNC---LRYARQVFDDLRD-KTLS 99
N T + H + K G + + KL+ + L +A++VF++ T
Sbjct: 41 NCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCF 100
Query: 100 AYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGR 159
YN +I Y G E++ L R++ SG D +TF L A + + G
Sbjct: 101 MYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAK--------GN 152
Query: 160 IVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMN 219
+ + L + KD + +L Y + G + AR VFD MSE+NV+S TS+I GY
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 220 QGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFAS 279
+ KDA +F + V + V PN T
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVT-------------------------------PNSVTMVC 241
Query: 280 IIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKN 339
+I AC+ + E G++V + + + + + SAL+DMY KC + ++R+FD N
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 340 VFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACA-----------H 388
+ +M Y + G EAL +F M ++ GV P+ ++ LSA+S+C+ H
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLM-MDSGVRPDRISMLSAISSCSQLRNILWGKSCH 360
Query: 389 AGLVDKGLEIFQSMEN--------------EYKVKPRMEH-----YACVVDLLGRAGRLN 429
++ G E + ++ N +++ RM + + +V G ++
Sbjct: 361 GYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVD 420
Query: 430 QAWEFVMRMPERPNSDVWAALLS 452
AWE MPE+ N W ++S
Sbjct: 421 AAWETFETMPEK-NIVSWNTIIS 442
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 134/262 (51%), Gaps = 15/262 (5%)
Query: 157 LGRIVHVQ-ILKADVDVEKDDVL----CTALTDSYVKNGRI-----AYARTVFDVMSEKN 206
LG ++H+ ++ A K +L CT T S +KN + + R++ + +
Sbjct: 4 LGNVLHLSPMVLATTTTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDND 63
Query: 207 VISSTSLISGYMNQGLFKD---AECIFQKTVD-KDIVVFNAMIEGYSKTSECATRSLEVY 262
V + T L++ G + A+ +F+ + ++N++I GY+ + C ++ ++
Sbjct: 64 VSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLC-NEAILLF 122
Query: 263 IDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKC 322
+ M P+ TF + AC+ A G Q+ ++K + + + ++L+ Y++C
Sbjct: 123 LRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAEC 182
Query: 323 GRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSA 382
G + +R+VFD M ++NV SWTSMI GY + F +A++LF +M + V PN VT +
Sbjct: 183 GELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCV 242
Query: 383 LSACAHAGLVDKGLEIFQSMEN 404
+SACA ++ G +++ + N
Sbjct: 243 ISACAKLEDLETGEKVYAFIRN 264
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 268 bits (686), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 162/492 (32%), Positives = 269/492 (54%), Gaps = 12/492 (2%)
Query: 22 FLQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCN 81
+++ + P+S + + + +G+ +++ I +G N + L+ +Y+KCN
Sbjct: 226 MVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCN 285
Query: 82 CLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILK 141
+ A+++FD+ L N M Y++QG E+LG+ ++ SG + D SM+
Sbjct: 286 AIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPD--RISMLSA 343
Query: 142 ASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDV 201
S+ + RN+ G+ H +L+ E D +C AL D Y+K R A +FD
Sbjct: 344 ISSCSQLRNIL----WGKSCHGYVLRNGF--ESWDNICNALIDMYMKCHRQDTAFRIFDR 397
Query: 202 MSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEV 261
MS K V++ S+++GY+ G A F+ +K+IV +N +I G + S ++EV
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGS-LFEEAIEV 456
Query: 262 YIDMQ-RLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYS 320
+ MQ + + T SI AC + A ++ + + + K ++LG+ L+DM+S
Sbjct: 457 FCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFS 516
Query: 321 KCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFL 380
+CG + +F+ + ++V +WT+ I G + A+ELF M IE G+ P+ V F+
Sbjct: 517 RCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDM-IEQGLKPDGVAFV 575
Query: 381 SALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPE 440
AL+AC+H GLV +G EIF SM + V P HY C+VDLLGRAG L +A + + MP
Sbjct: 576 GALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPM 635
Query: 441 RPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSE 500
PN +W +LL++CR+ GN EMA AA E ++ A R G+YV LSN A+A +W+ +++
Sbjct: 636 EPNDVIWNSLLAACRVQGNVEMAAYAA-EKIQVLAPERTGSYVLLSNVYASAGRWNDMAK 694
Query: 501 LREVMKERGISK 512
+R MKE+G+ K
Sbjct: 695 VRLSMKEKGLRK 706
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 139/552 (25%), Positives = 228/552 (41%), Gaps = 85/552 (15%)
Query: 1 MNNGILRPFFSSRALFSPHQPFLQ--NHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHI 58
M N ++R + SS FL+ N P L S +G IH I
Sbjct: 101 MYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 59 LKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESL 118
+K G+ + + L+ Y +C L AR+VFD++ ++ + ++ MI Y ++ ++++
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 119 GLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVL 178
L R +V E++ + +M+ S A L DL V + +E +D++
Sbjct: 221 DLFFR-MVRDEEVTPNSVTMVCVISA------CAKLEDLETGEKVYAFIRNSGIEVNDLM 273
Query: 179 CTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDI 238
+AL D Y+K I A+ +FD N+ ++ S Y+ QGL ++A +
Sbjct: 274 VSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREA-----------L 322
Query: 239 VVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQS 298
VFN M++ RP+ + S I +CS + G+
Sbjct: 323 GVFNLMMDS---------------------GVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 299 QLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPD- 357
+++ F + +ALIDMY KC R + R+FD M K V +W S++ GY +NG D
Sbjct: 362 YVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDA 421
Query: 358 ------------------------------EALELFQKMQIEYGVVPNFVTFLSALSACA 387
EA+E+F MQ + GV + VT +S SAC
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACG 481
Query: 388 HAGLVDKGLEIFQSME-NEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDV 446
H G +D I+ +E N ++ R+ +VD+ R G A + R S
Sbjct: 482 HLGALDLAKWIYYYIEKNGIQLDVRLG--TTLVDMFSRCGDPESAMSIFNSLTNRDVS-A 538
Query: 447 WAALLSSCRLHGNTEMAKLAASELF-KLNANGRPGAYVALSNTLAAAEKWDSVSELREV- 504
W A + + + GN E A ELF + G VA L A V + +E+
Sbjct: 539 WTAAIGAMAMAGNAE----RAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIF 594
Query: 505 ---MKERGISKD 513
+K G+S +
Sbjct: 595 YSMLKLHGVSPE 606
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 186/443 (41%), Gaps = 75/443 (16%)
Query: 44 NSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNC---LRYARQVFDDLRD-KTLS 99
N T + H + K G + + KL+ + L +A++VF++ T
Sbjct: 41 NCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCF 100
Query: 100 AYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGR 159
YN +I Y G E++ L R++ SG D +TF L A + + G
Sbjct: 101 MYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAK--------GN 152
Query: 160 IVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMN 219
+ + L + KD + +L Y + G + AR VFD MSE+NV+S TS+I GY
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 220 QGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFAS 279
+ KDA +F + V + V PN T
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVT-------------------------------PNSVTMVC 241
Query: 280 IIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKN 339
+I AC+ + E G++V + + + + + SAL+DMY KC + ++R+FD N
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 340 VFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACA-----------H 388
+ +M Y + G EAL +F M ++ GV P+ ++ LSA+S+C+ H
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLM-MDSGVRPDRISMLSAISSCSQLRNILWGKSCH 360
Query: 389 AGLVDKGLEIFQSMEN--------------EYKVKPRMEH-----YACVVDLLGRAGRLN 429
++ G E + ++ N +++ RM + + +V G ++
Sbjct: 361 GYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVD 420
Query: 430 QAWEFVMRMPERPNSDVWAALLS 452
AWE MPE+ N W ++S
Sbjct: 421 AAWETFETMPEK-NIVSWNTIIS 442
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 134/262 (51%), Gaps = 15/262 (5%)
Query: 157 LGRIVHVQ-ILKADVDVEKDDVL----CTALTDSYVKNGRI-----AYARTVFDVMSEKN 206
LG ++H+ ++ A K +L CT T S +KN + + R++ + +
Sbjct: 4 LGNVLHLSPMVLATTTTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDND 63
Query: 207 VISSTSLISGYMNQGLFKD---AECIFQKTVDKDIV-VFNAMIEGYSKTSECATRSLEVY 262
V + T L++ G + A+ +F+ + ++N++I GY+ + C ++ ++
Sbjct: 64 VSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLC-NEAILLF 122
Query: 263 IDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKC 322
+ M P+ TF + AC+ A G Q+ ++K + + + ++L+ Y++C
Sbjct: 123 LRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAEC 182
Query: 323 GRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSA 382
G + +R+VFD M ++NV SWTSMI GY + F +A++LF +M + V PN VT +
Sbjct: 183 GELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCV 242
Query: 383 LSACAHAGLVDKGLEIFQSMEN 404
+SACA ++ G +++ + N
Sbjct: 243 ISACAKLEDLETGEKVYAFIRN 264
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 268 bits (684), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 160/472 (33%), Positives = 258/472 (54%), Gaps = 44/472 (9%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVF---DDLRDKTLSAYNYMIGAY 108
+ +H + GF ++++ + Y K LR A VF D+LRD+ ++N MI AY
Sbjct: 158 KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEV--SWNSMIVAY 215
Query: 109 LKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKA 168
+ + ++L L + ++ G K+D FT + +L A TS +G GR H +++KA
Sbjct: 216 GQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLD----HLIG--GRQFHGKLIKA 269
Query: 169 DVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAEC 228
++ + + L D Y K G G++ D+E
Sbjct: 270 GF--HQNSHVGSGLIDFYSKCGGC---------------------------DGMY-DSEK 299
Query: 229 IFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVA 288
+FQ+ + D+VV+N MI GYS E + +++ + MQR+ RP+ +F + ACS ++
Sbjct: 300 VFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLS 359
Query: 289 AFEVGQQVQSQLMKTPF-FGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMI 347
+ +Q+ +K+ I + +ALI +Y K G + D+R VFD M + N S+ MI
Sbjct: 360 SPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMI 419
Query: 348 DGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYK 407
GY ++G EAL L+Q+M ++ G+ PN +TF++ LSACAH G VD+G E F +M+ +K
Sbjct: 420 KGYAQHGHGTEALLLYQRM-LDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFK 478
Query: 408 VKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAA 467
++P EHY+C++DLLGRAG+L +A F+ MP +P S WAALL +CR H N +A+ AA
Sbjct: 479 IEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAA 538
Query: 468 SELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
+EL + YV L+N A A KW+ ++ +R+ M+ + I K CSW+
Sbjct: 539 NELMVMQPLA-ATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWI 589
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 116/465 (24%), Positives = 209/465 (44%), Gaps = 22/465 (4%)
Query: 50 SGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYL 109
+G+++H+ +K+ +T +S + LY KC L YAR F + + +YN ++ AY
Sbjct: 26 TGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYA 85
Query: 110 KQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKAD 169
K ++ + R+L + D +++ ++ + + + A + R+ + L +
Sbjct: 86 KDSKIH----IARQLFDEIPQPDTVSYNTLI-SGYADARETFAAMVLFKRM---RKLGFE 137
Query: 170 VDVEKDDVLCTALTD--SYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAE 227
VD L A D +K FD S N + ++ Y GL ++A
Sbjct: 138 VDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVN----NAFVTYYSKGGLLREAV 193
Query: 228 CIFQKTVD-KDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSM 286
+F + +D V +N+MI Y + E A ++L +Y +M F+ ++ T AS++ A +
Sbjct: 194 SVFYGMDELRDEVSWNSMIVAYGQHKEGA-KALALYKEMIFKGFKIDMFTLASVLNALTS 252
Query: 287 VAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCG---RVVDSRRVFDHMHQKNVFSW 343
+ G+Q +L+K F + +GS LID YSKCG + DS +VF + ++ W
Sbjct: 253 LDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVW 312
Query: 344 TSMIDGYGKN-GFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSM 402
+MI GY N +EA++ F++MQ G P+ +F+ SAC++ + +I
Sbjct: 313 NTMISGYSMNEELSEEAVKSFRQMQ-RIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLA 371
Query: 403 ENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEM 462
+ R+ ++ L ++G L A RMPE N+ + ++ HG+
Sbjct: 372 IKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPEL-NAVSFNCMIKGYAQHGHGTE 430
Query: 463 AKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKE 507
A L + +VA+ + A K D E MKE
Sbjct: 431 ALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKE 475
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 138/322 (42%), Gaps = 51/322 (15%)
Query: 35 LSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLK---CNCLRYARQVFD 91
L++ L + D G+ H ++K GF N+++ L+ Y K C+ + + +VF
Sbjct: 243 LASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQ 302
Query: 92 DLRDKTLSAYNYMIGAY-LKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRN 150
++ L +N MI Y + + EE++ R++ G + D +F + A ++ S +
Sbjct: 303 EILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPS 362
Query: 151 VAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISS 210
+ +H +K+ + + V AL Y K+G + AR VFD M E N +S
Sbjct: 363 QC------KQIHGLAIKSHIPSNRISV-NNALISLYYKSGNLQDARWVFDRMPELNAVSF 415
Query: 211 TSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNF 270
+I GY G +A ++Q+ +D I
Sbjct: 416 NCMIKGYAQHGHGTEALLLYQRMLDSGIA------------------------------- 444
Query: 271 RPNISTFASIIGACSMVAAFEVGQQVQSQLMKT----PFFGHIKLGSALIDMYSKCGRVV 326
PN TF +++ AC+ + GQ+ + + +T P H S +ID+ + G++
Sbjct: 445 -PNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHY---SCMIDLLGRAGKLE 500
Query: 327 DSRRVFDHM-HQKNVFSWTSMI 347
++ R D M ++ +W +++
Sbjct: 501 EAERFIDAMPYKPGSVAWAALL 522
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 152/439 (34%), Positives = 255/439 (58%), Gaps = 28/439 (6%)
Query: 86 ARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILK--AS 143
A Q+FD++ + +YN M+ Y++ V+ EK F M K AS
Sbjct: 112 AHQLFDEIPEPDTFSYNIMLSCYVRN--------------VNFEKAQSFFDRMPFKDAAS 157
Query: 144 TSTSGRNVAPLGDL--GRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDV 201
+T A G++ R + ++ EK++V A+ Y++ G + A F V
Sbjct: 158 WNTMITGYARRGEMEKARELFYSMM------EKNEVSWNAMISGYIECGDLEKASHFFKV 211
Query: 202 MSEKNVISSTSLISGYMNQGLFKDAECIFQK-TVDKDIVVFNAMIEGYSKTSECATRSLE 260
+ V++ T++I+GYM + AE +F+ TV+K++V +NAMI GY + S L+
Sbjct: 212 APVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSR-PEDGLK 270
Query: 261 VYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYS 320
++ M RPN S +S + CS ++A ++G+Q+ + K+ + ++LI MY
Sbjct: 271 LFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYC 330
Query: 321 KCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFL 380
KCG + D+ ++F+ M +K+V +W +MI GY ++G D+AL LF++M I+ + P+++TF+
Sbjct: 331 KCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREM-IDNKIRPDWITFV 389
Query: 381 SALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPE 440
+ L AC HAGLV+ G+ F+SM +YKV+P+ +HY C+VDLLGRAG+L +A + + MP
Sbjct: 390 AVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPF 449
Query: 441 RPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSE 500
RP++ V+ LL +CR+H N E+A+ AA +L +LN+ G YV L+N A+ +W+ V+
Sbjct: 450 RPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAG-YVQLANIYASKNRWEDVAR 508
Query: 501 LREVMKERGISKDTACSWV 519
+R+ MKE + K SW+
Sbjct: 509 VRKRMKESNVVKVPGYSWI 527
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 127/275 (46%), Gaps = 15/275 (5%)
Query: 191 RIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSK 250
R+ A +FD + E + S ++S Y+ F+ A+ F + KD +N MI GY++
Sbjct: 108 RMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYAR 167
Query: 251 TSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQ-QVQSQLMKTPFFGHI 309
E ++ E++ M N +S A I G E G + S K +
Sbjct: 168 RGE-MEKARELFYSMMEKN---EVSWNAMISG------YIECGDLEKASHFFKVAPVRGV 217
Query: 310 KLGSALIDMYSKCGRVVDSRRVFDHMH-QKNVFSWTSMIDGYGKNGFPDEALELFQKMQI 368
+A+I Y K +V + +F M KN+ +W +MI GY +N P++ L+LF+ M +
Sbjct: 218 VAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAM-L 276
Query: 369 EYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRL 428
E G+ PN SAL C+ + G +I Q + ++ + + ++ + + G L
Sbjct: 277 EEGIRPNSSGLSSALLGCSELSALQLGRQIHQ-IVSKSTLCNDVTALTSLISMYCKCGEL 335
Query: 429 NQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMA 463
AW+ M ++ + W A++S HGN + A
Sbjct: 336 GDAWKLFEVM-KKKDVVAWNAMISGYAQHGNADKA 369
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 140/340 (41%), Gaps = 76/340 (22%)
Query: 77 YLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRL-----------L 125
Y++C L A F + + A+ MI Y+K +VE + + + + +
Sbjct: 196 YIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAM 255
Query: 126 VSG-----EKLDGFT-FSMILKAST--STSGRNVAPLG-------DLGRIVHVQILKADV 170
+SG DG F +L+ ++SG + A LG LGR +H + K+ +
Sbjct: 256 ISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTL 315
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
D T+L Y K G + A +F+VM +K+V++ ++ISGY G A C+F
Sbjct: 316 C--NDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLF 373
Query: 231 QKTVDKDI------------------------VVFNAMIEGYSKTSE-----C------- 254
++ +D I F +M+ Y + C
Sbjct: 374 REMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGR 433
Query: 255 ATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMK---TPFFGHIKL 311
A + E ++ + FRP+ + F +++GAC + E+ + +L++ G+++L
Sbjct: 434 AGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQL 493
Query: 312 GSALIDMYSKCGRVVDSRRVFDHMHQKNV-----FSWTSM 346
++Y+ R D RV M + NV +SW +
Sbjct: 494 A----NIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEI 529
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 7/166 (4%)
Query: 30 PHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQV 89
P+S+ LS+ L G+ IH + K+ + L+ +Y KC L A ++
Sbjct: 282 PNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKL 341
Query: 90 FDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGR 149
F+ ++ K + A+N MI Y + G +++L L R ++ + + D TF +L A
Sbjct: 342 FEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLAC------ 395
Query: 150 NVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYA 195
N A L ++G + + + + D VE T + D + G++ A
Sbjct: 396 NHAGLVNIG-MAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEA 440
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 154/497 (30%), Positives = 264/497 (53%), Gaps = 47/497 (9%)
Query: 23 LQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNC 82
LQ+H S S ++ I++ G I H+ G P + L+ +Y+K N
Sbjct: 52 LQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNL 111
Query: 83 LRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKA 142
L A Q+FD + + + ++ MI AY K +++L L+ +L + + +T+S +L++
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS 171
Query: 143 STSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVM 202
S R++H I+K +
Sbjct: 172 CNGMSDV---------RMLHCGIIKEGL-------------------------------- 190
Query: 203 SEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVY 262
E +V ++LI + G +DA +F + V D +V+N++I G+++ S + +LE++
Sbjct: 191 -ESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSR-SDVALELF 248
Query: 263 IDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKC 322
M+R F +T S++ AC+ +A E+G Q ++K + + L +AL+DMY KC
Sbjct: 249 KRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKC 306
Query: 323 GRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSA 382
G + D+ RVF+ M +++V +W++MI G +NG+ EAL+LF++M+ G PN++T +
Sbjct: 307 GSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMK-SSGTKPNYITIVGV 365
Query: 383 LSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERP 442
L AC+HAGL++ G F+SM+ Y + P EHY C++DLLG+AG+L+ A + + M P
Sbjct: 366 LFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEP 425
Query: 443 NSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELR 502
++ W LL +CR+ N +A+ AA ++ L+ G Y LSN A ++KWDSV E+R
Sbjct: 426 DAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPED-AGTYTLLSNIYANSQKWDSVEEIR 484
Query: 503 EVMKERGISKDTACSWV 519
M++RGI K+ CSW+
Sbjct: 485 TRMRDRGIKKEPGCSWI 501
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 15/152 (9%)
Query: 257 RSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGH---IKLGS 313
R+++ +Q + +T++ +I C A G + L F GH + L +
Sbjct: 44 RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLY---FNGHRPMMFLVN 100
Query: 314 ALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVV 373
LI+MY K + D+ ++FD M Q+NV SWT+MI Y K +ALEL M + V
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLM-LRDNVR 159
Query: 374 PNFVTFLSALSAC--------AHAGLVDKGLE 397
PN T+ S L +C H G++ +GLE
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLE 191
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 159/489 (32%), Positives = 260/489 (53%), Gaps = 54/489 (11%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ +H+H++ +G T I+ KL+ Y++C + AR+VFD++ + +S MIGA +
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
G +ESL R + G KLD F +LKAS + R + G+++H +LK
Sbjct: 95 NGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDR------EFGKMIHCLVLK--F 146
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQG-------LF 223
E D + ++L D Y K G + AR VF + E++++ ++ISGY N L
Sbjct: 147 SYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLV 206
Query: 224 KDAECIFQKTVDKDIVVFNAMIEGYS------KTSECAT--------------------- 256
KD + + + D++ +NA+I G+S K SE
Sbjct: 207 KDMKLL---GIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGL 263
Query: 257 -------RSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHI 309
++ + + M PN +T +++ AC+ +A + G+++ + T H
Sbjct: 264 VHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHG 323
Query: 310 KLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIE 369
+ SAL+DMY KCG + ++ +F +K ++ SMI Y +G D+A+ELF +M+
Sbjct: 324 FVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEAT 383
Query: 370 YGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLN 429
G + +TF + L+AC+HAGL D G +F M+N+Y++ PR+EHYAC+VDLLGRAG+L
Sbjct: 384 -GEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLV 442
Query: 430 QAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTL 489
+A+E + M P+ VW ALL++CR HGN E+A++AA L +L G + L++
Sbjct: 443 EAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPE-NSGNGLLLTSLY 501
Query: 490 AAAEKWDSV 498
A A W+SV
Sbjct: 502 ANAGSWESV 510
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 11/124 (8%)
Query: 265 MQRLNFRPN------ISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDM 318
M++L P+ I ++ +I A F G+ + + L+ + ++ + L+
Sbjct: 1 MKKLTIVPSSFRLLSIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTF 60
Query: 319 YSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKM-----QIEYGVV 373
Y +CG+V+D+R+VFD M ++++ MI +NG+ E+L+ F++M +++ +V
Sbjct: 61 YVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIV 120
Query: 374 PNFV 377
P+ +
Sbjct: 121 PSLL 124
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Query: 3 NGILRPFFSSRALFSPHQPFLQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTG 62
+G++ F + +A + Q + H P+S + L G+ IH + + TG
Sbjct: 261 SGLVHNFQNEKAFDAFKQ--MLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTG 318
Query: 63 FVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVR 122
+ + LL +Y KC + A +F KT +N MI Y G ++++ L
Sbjct: 319 LEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFD 378
Query: 123 RLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGR 159
++ +GEKLD TF+ IL A + A L DLG+
Sbjct: 379 QMEATGEKLDHLTFTAILTACSH------AGLTDLGQ 409
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 265 bits (678), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 157/476 (32%), Positives = 258/476 (54%), Gaps = 16/476 (3%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQ 111
+ I++ I+ G ++ + K++ K + YA ++F+ + + + YN +I AY
Sbjct: 27 KKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHN 86
Query: 112 GQVEESLGLVRRLLVSGEKL-DGFTFSMILKASTSTSGRNVAPLGD--LGRIVHVQILKA 168
+ + + ++LL +L D FTF + K+ S LG LG+ VH + K
Sbjct: 87 SLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCAS--------LGSCYLGKQVHGHLCKF 138
Query: 169 DVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAEC 228
V AL D Y+K + A VFD M E++VIS SL+SGY G K A+
Sbjct: 139 GPRFHV--VTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKG 196
Query: 229 IFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVA 288
+F +DK IV + AMI GY+ C +++ + +MQ P+ + S++ +C+ +
Sbjct: 197 LFHLMLDKTIVSWTAMISGYTGIG-CYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLG 255
Query: 289 AFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMID 348
+ E+G+ + + F + +ALI+MYSKCG + + ++F M K+V SW++MI
Sbjct: 256 SLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMIS 315
Query: 349 GYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKV 408
GY +G A+E F +MQ V PN +TFL LSAC+H G+ +GL F M +Y++
Sbjct: 316 GYAYHGNAHGAIETFNEMQ-RAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQI 374
Query: 409 KPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAAS 468
+P++EHY C++D+L RAG+L +A E MP +P+S +W +LLSSCR GN ++A +A
Sbjct: 375 EPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMD 434
Query: 469 ELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWVGADSV 524
L +L G YV L+N A KW+ VS LR++++ + K S + +++
Sbjct: 435 HLVELEPEDM-GNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNI 489
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 159/464 (34%), Positives = 241/464 (51%), Gaps = 49/464 (10%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G IHS KTG + + + LY KC ++ +F + R + AYN MI Y
Sbjct: 240 GMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTS 299
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRI--VHVQILKA 168
G+ E SL L + L++SG +L T ++ S G L I +H LK+
Sbjct: 300 NGETELSLSLFKELMLSGARLRSSTLVSLVPVS-----------GHLMLIYAIHGYCLKS 348
Query: 169 DVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAEC 228
+ + TALT Y K I AR +FD EK++ S
Sbjct: 349 NFLSHAS--VSTALTTVYSKLNEIESARKLFDESPEKSLPS------------------- 387
Query: 229 IFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVA 288
+NAMI GY++ ++ ++ +MQ+ F PN T I+ AC+ +
Sbjct: 388 ------------WNAMISGYTQNG-LTEDAISLFREMQKSEFSPNPVTITCILSACAQLG 434
Query: 289 AFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMID 348
A +G+ V + T F I + +ALI MY+KCG + ++RR+FD M +KN +W +MI
Sbjct: 435 ALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMIS 494
Query: 349 GYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKV 408
GYG +G EAL +F +M + G+ P VTFL L AC+HAGLV +G EIF SM + Y
Sbjct: 495 GYGLHGQGQEALNIFYEM-LNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGF 553
Query: 409 KPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAAS 468
+P ++HYAC+VD+LGRAG L +A +F+ M P S VW LL +CR+H +T +A+ +
Sbjct: 554 EPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSE 613
Query: 469 ELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISK 512
+LF+L+ + G +V LSN +A + + +R+ K+R ++K
Sbjct: 614 KLFELDPDN-VGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAK 656
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 182/421 (43%), Gaps = 59/421 (14%)
Query: 50 SGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYL 109
+G+ IH + G + ++ +Y K + AR+VFD + +K +N MI Y
Sbjct: 137 AGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYR 196
Query: 110 KQGQVEESLGLVRRLL-VSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKA 168
K ES+ + R L+ S +LD T IL A VA L +L + + L
Sbjct: 197 KNEMYVESIQVFRDLINESCTRLDTTTLLDILPA--------VAELQELRLGMQIHSLAT 248
Query: 169 DVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAEC 228
D + T Y K G+I M LF++
Sbjct: 249 KTGCYSHDYVLTGFISLYSKCGKIK------------------------MGSALFRE--- 281
Query: 229 IFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASII---GACS 285
F+K DIV +NAMI GY+ E SL ++ ++ R ST S++ G
Sbjct: 282 -FRK---PDIVAYNAMIHGYTSNGETEL-SLSLFKELMLSGARLRSSTLVSLVPVSGHLM 336
Query: 286 MVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTS 345
++ A + +K+ F H + +AL +YSK + +R++FD +K++ SW +
Sbjct: 337 LIYA------IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNA 390
Query: 346 MIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGL---EIFQSM 402
MI GY +NG ++A+ LF++MQ + PN VT LSACA G + G ++ +S
Sbjct: 391 MISGYTQNGLTEDAISLFREMQ-KSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRST 449
Query: 403 ENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEM 462
+ E + ++ + + G + +A M ++ N W ++S LHG +
Sbjct: 450 DFESSIYVS----TALIGMYAKCGSIAEARRLFDLMTKK-NEVTWNTMISGYGLHGQGQE 504
Query: 463 A 463
A
Sbjct: 505 A 505
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 149/355 (41%), Gaps = 41/355 (11%)
Query: 39 LQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTL 98
L ++ S + S H+ I+ GF + ++ KL + YAR +F ++ +
Sbjct: 24 LDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDV 83
Query: 99 SAYNYMIGAYLKQGQVEESLGLVRRLLVSGE-KLDGFTFSMILKASTSTSGRNVAPLGDL 157
+N ++ + SL + L S + K + T++ + A++
Sbjct: 84 FLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRA------ 137
Query: 158 GRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGY 217
GR++H Q + D E +L + + Y K R+ AR VFD M EK+ I ++ISGY
Sbjct: 138 GRVIHGQAVVDGCDSEL--LLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGY 195
Query: 218 MNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTF 277
++ ++ +F+ +++ R + +T
Sbjct: 196 RKNEMYVESIQVFRDLINESCT-------------------------------RLDTTTL 224
Query: 278 ASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQ 337
I+ A + + +G Q+ S KT + H + + I +YSKCG++ +F +
Sbjct: 225 LDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRK 284
Query: 338 KNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLV 392
++ ++ +MI GY NG + +L LF+++ + G T +S + H L+
Sbjct: 285 PDIVAYNAMIHGYTSNGETELSLSLFKELMLS-GARLRSSTLVSLVPVSGHLMLI 338
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 123/276 (44%), Gaps = 4/276 (1%)
Query: 211 TSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQR-LN 269
T L + G A IF D+ +FN ++ G+S +E SL V+ +++ +
Sbjct: 56 TKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFS-VNESPHSSLSVFAHLRKSTD 114
Query: 270 FRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSR 329
+PN ST+A I A S G+ + Q + + LGS ++ MY K RV D+R
Sbjct: 115 LKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDAR 174
Query: 330 RVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHA 389
+VFD M +K+ W +MI GY KN E++++F+ + E + T L L A A
Sbjct: 175 KVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAEL 234
Query: 390 GLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAA 449
+ G++I S+ + + L + G++ + R +P+ + A
Sbjct: 235 QELRLGMQI-HSLATKTGCYSHDYVLTGFISLYSKCGKIKMG-SALFREFRKPDIVAYNA 292
Query: 450 LLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVAL 485
++ +G TE++ EL A R V+L
Sbjct: 293 MIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSL 328
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 56/120 (46%)
Query: 23 LQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNC 82
+Q +F P+ ++ L S G+ +H + T F + +S L+ +Y KC
Sbjct: 411 MQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGS 470
Query: 83 LRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKA 142
+ AR++FD + K +N MI Y GQ +E+L + +L SG TF +L A
Sbjct: 471 IAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYA 530
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 164/520 (31%), Positives = 267/520 (51%), Gaps = 51/520 (9%)
Query: 3 NGILRPFFSSRALFSPHQPFLQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTG 62
NG L+ S +LFS + P+ S L+ + G IH LK G
Sbjct: 85 NGDLK---GSLSLFSE----MGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIG 137
Query: 63 FVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQG---QVEESLG 119
F + L+ +Y KC + A +VF + D++L ++N MI ++ G + ++ G
Sbjct: 138 FEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFG 197
Query: 120 LVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLC 179
+++ + E+ D FT + +LKA +ST G A G+ +H ++++ +
Sbjct: 198 MMQEANIK-ERPDEFTLTSLLKACSST-GMIYA-----GKQIHGFLVRSGFHCPSSATIT 250
Query: 180 TALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIV 239
+L D YVK G + AR FD + EK +IS +SLI GY +G F +A +F++
Sbjct: 251 GSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKR------- 303
Query: 240 VFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQ 299
+Q LN + + +SIIG + A G+Q+Q+
Sbjct: 304 -------------------------LQELNSQIDSFALSSIIGVFADFALLRQGKQMQAL 338
Query: 300 LMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEA 359
+K P + ++++DMY KCG V ++ + F M K+V SWT +I GYGK+G ++
Sbjct: 339 AVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKS 398
Query: 360 LELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVV 419
+ +F +M + + + P+ V +L+ LSAC+H+G++ +G E+F + + +KPR+EHYACVV
Sbjct: 399 VRIFYEM-LRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVV 457
Query: 420 DLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRP 479
DLLGRAGRL +A + MP +PN +W LLS CR+HG+ E+ K L +++A P
Sbjct: 458 DLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAK-NP 516
Query: 480 GAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
YV +SN A W+ RE+ +G+ K+ SWV
Sbjct: 517 ANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWV 556
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 155/337 (45%), Gaps = 44/337 (13%)
Query: 35 LSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLR 94
L + L+ G +H ++LK+G N S L+ +Y KC A +VFD +
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 95 DKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPL 154
++ + +++ ++ ++ G ++ SL L + G + FTFS LKA L
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKA--------CGLL 120
Query: 155 GDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLI 214
L + + + + E + +L D Y K GRI A VF + ++++IS ++I
Sbjct: 121 NALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMI 180
Query: 215 SGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNF--RP 272
+G+++ G +++L+ + MQ N RP
Sbjct: 181 AGFVHAGY--------------------------------GSKALDTFGMMQEANIKERP 208
Query: 273 NISTFASIIGACSMVAAFEVGQQVQSQLMKTPFF--GHIKLGSALIDMYSKCGRVVDSRR 330
+ T S++ ACS G+Q+ L+++ F + +L+D+Y KCG + +R+
Sbjct: 209 DEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARK 268
Query: 331 VFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQ 367
FD + +K + SW+S+I GY + G EA+ LF+++Q
Sbjct: 269 AFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQ 305
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 123/247 (49%), Gaps = 37/247 (14%)
Query: 154 LGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSL 213
L D G VH +LK+ + + + L D Y K A VFD M E+NV+S ++L
Sbjct: 21 LSDQGGQVHCYLLKSGSGL--NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSAL 78
Query: 214 ISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPN 273
+SG+ V N ++G SL ++ +M R PN
Sbjct: 79 MSGH----------------------VLNGDLKG----------SLSLFSEMGRQGIYPN 106
Query: 274 ISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFD 333
TF++ + AC ++ A E G Q+ +K F +++G++L+DMYSKCGR+ ++ +VF
Sbjct: 107 EFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFR 166
Query: 334 HMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVV--PNFVTFLSALSACAHAGL 391
+ +++ SW +MI G+ G+ +AL+ F MQ E + P+ T S L AC+ G+
Sbjct: 167 RIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQ-EANIKERPDEFTLTSLLKACSSTGM 225
Query: 392 VDKGLEI 398
+ G +I
Sbjct: 226 IYAGKQI 232
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 97/184 (52%), Gaps = 6/184 (3%)
Query: 269 NFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDS 328
N R N+ SI+ C+ + G QV L+K+ ++ + LIDMY KC + +
Sbjct: 4 NQRQNL---VSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMA 60
Query: 329 RRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAH 388
+VFD M ++NV SW++++ G+ NG +L LF +M + G+ PN TF + L AC
Sbjct: 61 YKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQ-GIYPNEFTFSTNLKACGL 119
Query: 389 AGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWA 448
++KGL+I + + +E +VD+ + GR+N+A + R+ +R W
Sbjct: 120 LNALEKGLQI-HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLIS-WN 177
Query: 449 ALLS 452
A+++
Sbjct: 178 AMIA 181
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 146/471 (30%), Positives = 250/471 (53%), Gaps = 48/471 (10%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+++HS + K G + +I+ L+++Y KC + YAR++FD++ ++ ++N MI Y +
Sbjct: 151 GRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSE 210
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDL--GRIVHVQILKA 168
G ++++ L R++ G + D T +L A + LGDL GR++
Sbjct: 211 AGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSH--------LGDLRTGRLLE------ 256
Query: 169 DVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAEC 228
++ + K L T L + LIS Y G A
Sbjct: 257 EMAITKKIGLSTFL---------------------------GSKLISMYGKCGDLDSARR 289
Query: 229 IFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVA 288
+F + + KD V + AMI YS+ + ++ + +++ +M++ P+ T ++++ AC V
Sbjct: 290 VFNQMIKKDRVAWTAMITVYSQNGK-SSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVG 348
Query: 289 AFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMID 348
A E+G+Q+++ + +I + + L+DMY KCGRV ++ RVF+ M KN +W +MI
Sbjct: 349 ALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMIT 408
Query: 349 GYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKV 408
Y G EAL LF +M V P+ +TF+ LSAC HAGLV +G F M + + +
Sbjct: 409 AYAHQGHAKEALLLFDRMS----VPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGL 464
Query: 409 KPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAAS 468
P++EHY ++DLL RAG L++AWEF+ R P +P+ + AA+L +C + + + A
Sbjct: 465 VPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMR 524
Query: 469 ELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
L ++ G YV SN LA + WD +++R +M++RG+ K CSW+
Sbjct: 525 MLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWI 575
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 184/382 (48%), Gaps = 44/382 (11%)
Query: 85 YARQVFDDLRDKTLSAYNYMI-GAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKAS 143
Y+ +F + ++NYMI G E +L L RR+ SG K D FT++ + A
Sbjct: 83 YSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIAC 142
Query: 144 TSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMS 203
V GR VH + K V +E+D + +L Y K G++ YAR +FD ++
Sbjct: 143 AKLEEIGV------GRSVHSSLFK--VGLERDVHINHSLIMMYAKCGQVGYARKLFDEIT 194
Query: 204 EKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYI 263
E+ D V +N+MI GYS+ A +++++
Sbjct: 195 ER-------------------------------DTVSWNSMISGYSEAG-YAKDAMDLFR 222
Query: 264 DMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCG 323
M+ F P+ T S++GACS + G+ ++ + LGS LI MY KCG
Sbjct: 223 KMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCG 282
Query: 324 RVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSAL 383
+ +RRVF+ M +K+ +WT+MI Y +NG EA +LF +M+ + GV P+ T + L
Sbjct: 283 DLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEME-KTGVSPDAGTLSTVL 341
Query: 384 SACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPN 443
SAC G ++ G +I ++ +E ++ + +VD+ G+ GR+ +A MP + N
Sbjct: 342 SACGSVGALELGKQI-ETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVK-N 399
Query: 444 SDVWAALLSSCRLHGNTEMAKL 465
W A++++ G+ + A L
Sbjct: 400 EATWNAMITAYAHQGHAKEALL 421
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 132/261 (50%), Gaps = 10/261 (3%)
Query: 213 LISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRP 272
LI + G F + +F T + + FN MI G + T +L +Y M+ +P
Sbjct: 71 LIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKP 130
Query: 273 NISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVF 332
+ T+ + AC+ + VG+ V S L K + + +LI MY+KCG+V +R++F
Sbjct: 131 DKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLF 190
Query: 333 DHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLV 392
D + +++ SW SMI GY + G+ +A++LF+KM+ E G P+ T +S L AC+H G +
Sbjct: 191 DEITERDTVSWNSMISGYSEAGYAKDAMDLFRKME-EEGFEPDERTLVSMLGACSHLGDL 249
Query: 393 DKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLS 452
G + + M K+ + ++ + G+ G L+ A +M ++ + W A+++
Sbjct: 250 RTG-RLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKK-DRVAWTAMIT 307
Query: 453 SCRLHGNTEMAKLAASELFKL 473
+G + SE FKL
Sbjct: 308 VYSQNGKS-------SEAFKL 321
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 149/437 (34%), Positives = 240/437 (54%), Gaps = 13/437 (2%)
Query: 83 LRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKL--DGFTFSMIL 140
L YA Q+ D TL A N MI A+ K E+S RR+L SG L D +T + ++
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLV 115
Query: 141 KASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFD 200
+A T R + G VH ++ D D + T L Y + G + VF+
Sbjct: 116 QACTGLRMR------ETGLQVHGMTIRRGFD--NDPHVQTGLISLYAELGCLDSCHKVFN 167
Query: 201 VMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLE 260
+ + + T++++ G A +F+ ++D + +NAMI GY++ E + +L
Sbjct: 168 SIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGE-SREALN 226
Query: 261 VYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYS 320
V+ MQ + N S++ AC+ + A + G+ S + + ++L + L+D+Y+
Sbjct: 227 VFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYA 286
Query: 321 KCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFL 380
KCG + + VF M +KNV++W+S ++G NGF ++ LELF M+ + GV PN VTF+
Sbjct: 287 KCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMK-QDGVTPNAVTFV 345
Query: 381 SALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPE 440
S L C+ G VD+G F SM NE+ ++P++EHY C+VDL RAGRL A + +MP
Sbjct: 346 SVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPM 405
Query: 441 RPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSE 500
+P++ VW++LL + R++ N E+ LA+ ++ +L GAYV LSN A + WD+VS
Sbjct: 406 KPHAAVWSSLLHASRMYKNLELGVLASKKMLELE-TANHGAYVLLSNIYADSNDWDNVSH 464
Query: 501 LREVMKERGISKDTACS 517
+R+ MK +G+ K CS
Sbjct: 465 VRQSMKSKGVRKQPGCS 481
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 140/357 (39%), Gaps = 79/357 (22%)
Query: 27 DFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLR-- 84
D P + ++ +Q +G +H ++ GF + ++ L+ LY + CL
Sbjct: 103 DLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSC 162
Query: 85 -----------------------------YARQVFDDLRDKTLSAYNYMIGAYLKQGQVE 115
+AR++F+ + ++ A+N MI Y + G+
Sbjct: 163 HKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESR 222
Query: 116 ESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKD 175
E+L + + + G K++G +L A T D GR H I + + +
Sbjct: 223 EALNVFHLMQLEGVKVNGVAMISVLSACTQLGAL------DQGRWAHSYIERNKIKITVR 276
Query: 176 DVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVD 235
L T L D Y K G + A VF M EKNV + +S ++G G
Sbjct: 277 --LATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGF------------- 321
Query: 236 KDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQ 295
+ LE++ M++ PN TF S++ CS+V + GQ+
Sbjct: 322 -------------------GEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQR 362
Query: 296 ----VQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQK-NVFSWTSMI 347
++++ P H L+D+Y++ GR+ D+ + M K + W+S++
Sbjct: 363 HFDSMRNEFGIEPQLEHY---GCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 157/503 (31%), Positives = 265/503 (52%), Gaps = 50/503 (9%)
Query: 17 SPHQPFLQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVL 76
S HQP DF S L+ + + GQ +H+ + TGF + ++ ++L
Sbjct: 244 SGHQP----SDFT-----FSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDF 294
Query: 77 YLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTF 136
Y K + + R +FD++ + +YN +I +Y + Q E SL R + G F F
Sbjct: 295 YSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPF 354
Query: 137 SMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYAR 196
+ +L + + S +GR +H Q L L TA + +V N
Sbjct: 355 ATMLSIAANLSSLQ------MGRQLHCQAL-----------LATADSILHVGN------- 390
Query: 197 TVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECAT 256
SL+ Y +F++AE IF+ + V + A+I GY +
Sbjct: 391 ---------------SLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGA 435
Query: 257 RSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALI 316
L+++ M+ N R + STFA+++ A + A+ +G+Q+ + ++++ ++ GS L+
Sbjct: 436 -GLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLV 494
Query: 317 DMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNF 376
DMY+KCG + D+ +VF+ M +N SW ++I + NG + A+ F KM IE G+ P+
Sbjct: 495 DMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKM-IESGLQPDS 553
Query: 377 VTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVM 436
V+ L L+AC+H G V++G E FQ+M Y + P+ +HYAC++DLLGR GR +A + +
Sbjct: 554 VSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMD 613
Query: 437 RMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWD 496
MP P+ +W+++L++CR+H N +A+ AA +LF + AYV++SN AAA +W+
Sbjct: 614 EMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWE 673
Query: 497 SVSELREVMKERGISKDTACSWV 519
V ++++ M+ERGI K A SWV
Sbjct: 674 KVRDVKKAMRERGIKKVPAYSWV 696
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 168/391 (42%), Gaps = 47/391 (12%)
Query: 66 NTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLL 125
NT + ++ ++K + AR +FD + D+T+ + ++G Y + +E+ L R++
Sbjct: 78 NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMC 137
Query: 126 VSGEKL--DGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALT 183
S D TF+ +L + P +G+ VH +K D + L
Sbjct: 138 RSSSCTLPDHVTFTTLLPGCN-----DAVPQNAVGQ-VHAFAVKLGFDTNPFLTVSNVLL 191
Query: 184 DSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECI-FQKTVDKDIVVFN 242
SY + R+ D C+ F++ +KD V FN
Sbjct: 192 KSYCEVRRL--------------------------------DLACVLFEEIPEKDSVTFN 219
Query: 243 AMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMK 302
+I GY K T S+ +++ M++ +P+ TF+ ++ A + F +GQQ+ + +
Sbjct: 220 TLITGYEKDG-LYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVT 278
Query: 303 TPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALEL 362
T F +G+ ++D YSK RV+++R +FD M + + S+ +I Y + + +L
Sbjct: 279 TGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHF 338
Query: 363 FQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYA-CVVDL 421
F++MQ NF F + LS A+ + G ++ + + H +VD+
Sbjct: 339 FREMQCMGFDRRNF-PFATMLSIAANLSSLQMGRQL--HCQALLATADSILHVGNSLVDM 395
Query: 422 LGRAGRLNQAWEFVMRMPERPNSDVWAALLS 452
+ +A +P+R W AL+S
Sbjct: 396 YAKCEMFEEAELIFKSLPQRTTVS-WTALIS 425
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 119/242 (49%), Gaps = 10/242 (4%)
Query: 159 RIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYM 218
R V +I+K D D + + ++ G+++ AR V+D M KN +S+ ++ISG++
Sbjct: 33 RRVDARIIKTGFDT--DTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHV 90
Query: 219 NQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLN--FRPNIST 276
G A +F D+ +V + ++ Y++ S + +++ M R + P+ T
Sbjct: 91 KTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSH-FDEAFKLFRQMCRSSSCTLPDHVT 149
Query: 277 FASIIGACSMVAAFEVGQQVQSQLMKTPFFGH--IKLGSALIDMYSKCGRVVDSRRVFDH 334
F +++ C+ QV + +K F + + + + L+ Y + R+ + +F+
Sbjct: 150 FTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEE 209
Query: 335 MHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDK 394
+ +K+ ++ ++I GY K+G E++ LF KM+ + G P+ TF L A GL D
Sbjct: 210 IPEKDSVTFNTLITGYEKDGLYTESIHLFLKMR-QSGHQPSDFTFSGVLKAV--VGLHDF 266
Query: 395 GL 396
L
Sbjct: 267 AL 268
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 262 bits (669), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 162/520 (31%), Positives = 277/520 (53%), Gaps = 36/520 (6%)
Query: 30 PHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQV 89
P L+N L + +G+ +HS I+K G N ++S LL +Y KC A+ V
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFV 203
Query: 90 FDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRL----------LVSGEKLDGF----- 134
FD + + +S++N MI +++ GQ++ ++ ++ ++SG G+
Sbjct: 204 FDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRAL 263
Query: 135 -TFSMILK-----------ASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTAL 182
FS +L+ AS ++ N+ L +G+ +H I+ D+ ++ AL
Sbjct: 264 DIFSKMLRDSLLSPDRFTLASVLSACANLEKLC-IGKQIHSHIVTTGFDIS--GIVLNAL 320
Query: 183 TDSYVKNGRIAYARTVFDVMSEKN--VISSTSLISGYMNQGLFKDAECIFQKTVDKDIVV 240
Y + G + AR + + K+ + T+L+ GY+ G A+ IF D+D+V
Sbjct: 321 ISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVA 380
Query: 241 FNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQL 300
+ AMI GY + ++ ++ M RPN T A+++ S +A+ G+Q+
Sbjct: 381 WTAMIVGYEQHGSYG-EAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSA 439
Query: 301 MKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMH-QKNVFSWTSMIDGYGKNGFPDEA 359
+K+ + + +ALI MY+K G + + R FD + +++ SWTSMI ++G +EA
Sbjct: 440 VKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEA 499
Query: 360 LELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVV 419
LELF+ M +E G+ P+ +T++ SAC HAGLV++G + F M++ K+ P + HYAC+V
Sbjct: 500 LELFETMLME-GLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMV 558
Query: 420 DLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRP 479
DL GRAG L +A EF+ +MP P+ W +LLS+CR+H N ++ K+AA L L
Sbjct: 559 DLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPEN-S 617
Query: 480 GAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
GAY AL+N +A KW+ +++R+ MK+ + K+ SW+
Sbjct: 618 GAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWI 657
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 180/421 (42%), Gaps = 86/421 (20%)
Query: 137 SMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYAR 196
+++ K+ ++GR A L VH +++K+ + L L + Y K G +AR
Sbjct: 18 NLLQKSVNKSNGRFTAQL------VHCRVIKSGLMFSV--YLMNNLMNVYSKTGYALHAR 69
Query: 197 TVFDVMSEKNVISSTSLISGYMNQGLFKDAEC-IFQKTVDKDIVVFNAMIEGYSKTSECA 255
+FD M + S +++S Y +G D+ C F + +D V + MI GY +
Sbjct: 70 KLFDEMPLRTAFSWNTVLSAYSKRGDM-DSTCEFFDQLPQRDSVSWTTMIVGYKNIGQ-Y 127
Query: 256 TRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSAL 315
+++ V DM + P T +++ + + E G++V S ++K G++ + ++L
Sbjct: 128 HKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSL 187
Query: 316 IDMYSKCGRVVDSRRVFD-------------------------------HMHQKNVFSWT 344
++MY+KCG + ++ VFD M ++++ +W
Sbjct: 188 LNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWN 247
Query: 345 SMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACA-----------HAGLVD 393
SMI G+ + G+ AL++F KM + + P+ T S LSACA H+ +V
Sbjct: 248 SMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVT 307
Query: 394 KGLEIF---------------------QSMENEYKVKPRMEHYACVVDLLGRAGRLNQAW 432
G +I + +E ++E + ++D + G +NQA
Sbjct: 308 TGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAK 367
Query: 433 EFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANG--RPGAYVALSNTLA 490
+ + +R + W A++ HG+ A LF+ G RP +Y TLA
Sbjct: 368 NIFVSLKDR-DVVAWTAMIVGYEQHGSYG----EAINLFRSMVGGGQRPNSY-----TLA 417
Query: 491 A 491
A
Sbjct: 418 A 418
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 261 bits (667), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 159/502 (31%), Positives = 257/502 (51%), Gaps = 50/502 (9%)
Query: 23 LQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNC 82
++ VP+ + + P +G+ IH+ +K G + + + +Y K
Sbjct: 99 MRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRL 158
Query: 83 LRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDG----FTFSM 138
AR++FD++ ++ L +N I + G+ E++ + ++DG TF
Sbjct: 159 RDDARKLFDEIPERNLETWNAFISNSVTDGRPREAI----EAFIEFRRIDGHPNSITFCA 214
Query: 139 ILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTV 198
L A + N LG +H +L++ D D +C L D Y K +I + +
Sbjct: 215 FLNACSDWLHLN------LGMQLHGLVLRSGFDT--DVSVCNGLIDFYGKCKQIRSSEII 266
Query: 199 FDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRS 258
F M KN +S SL++ Y+ + A ++ ++ KDIV +TS+
Sbjct: 267 FTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRS-RKDIV----------ETSD----- 310
Query: 259 LEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDM 318
+S++ AC+ +A E+G+ + + +K I +GSAL+DM
Sbjct: 311 ----------------FMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDM 354
Query: 319 YSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIE-YGVVPNFV 377
Y KCG + DS + FD M +KN+ + S+I GY G D AL LF++M G PN++
Sbjct: 355 YGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYM 414
Query: 378 TFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMR 437
TF+S LSAC+ AG V+ G++IF SM + Y ++P EHY+C+VD+LGRAG + +A+EF+ +
Sbjct: 415 TFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKK 474
Query: 438 MPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDS 497
MP +P VW AL ++CR+HG ++ LAA LFKL+ G +V LSNT AAA +W
Sbjct: 475 MPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKD-SGNHVLLSNTFAAAGRWAE 533
Query: 498 VSELREVMKERGISKDTACSWV 519
+ +RE +K GI K SW+
Sbjct: 534 ANTVREELKGVGIKKGAGYSWI 555
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 110/245 (44%), Gaps = 40/245 (16%)
Query: 157 LGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISG 216
LGR+VH +I+K +D L L + Y K AR V + +NV+S TSLISG
Sbjct: 24 LGRVVHARIVKT-LDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISG 82
Query: 217 YMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNIST 276
G F A++E + +M+R PN T
Sbjct: 83 LAQNGHFS-----------------TALVE---------------FFEMRREGVVPNDFT 110
Query: 277 FASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMH 336
F A + + G+Q+ + +K + +G + DMY K D+R++FD +
Sbjct: 111 FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 170
Query: 337 QKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVV---PNFVTFLSALSACAHAGLVD 393
++N+ +W + I +G P EA+E F IE+ + PN +TF + L+AC+ ++
Sbjct: 171 ERNLETWNAFISNSVTDGRPREAIEAF----IEFRRIDGHPNSITFCAFLNACSDWLHLN 226
Query: 394 KGLEI 398
G+++
Sbjct: 227 LGMQL 231
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 261 bits (667), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 156/474 (32%), Positives = 251/474 (52%), Gaps = 44/474 (9%)
Query: 48 PSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDD-LRDKTLS-AYNYMI 105
P SGQ +H H+ K G + L+ +Y KC + AR+VF++ + LS YN +I
Sbjct: 69 PVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALI 128
Query: 106 GAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQI 165
Y +V ++ + RR+ +G +D T ++ T V LGR +H Q
Sbjct: 129 SGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCT------VPEYLWLGRSLHGQC 182
Query: 166 LKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKD 225
+K +D E + + Y+K G + R +FD M K
Sbjct: 183 VKGGLDSEV--AVLNSFITMYMKCGSVEAGRRLFDEMPVKG------------------- 221
Query: 226 AECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACS 285
++ +NA+I GYS+ A LE+Y M+ P+ T S++ +C+
Sbjct: 222 ------------LITWNAVISGYSQNG-LAYDVLELYEQMKSSGVCPDPFTLVSVLSSCA 268
Query: 286 MVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTS 345
+ A ++G +V + F ++ + +A I MY++CG + +R VFD M K++ SWT+
Sbjct: 269 HLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTA 328
Query: 346 MIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENE 405
MI YG +G + L LF M I+ G+ P+ F+ LSAC+H+GL DKGLE+F++M+ E
Sbjct: 329 MIGCYGMHGMGEIGLMLFDDM-IKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKRE 387
Query: 406 YKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKL 465
YK++P EHY+C+VDLLGRAGRL++A EF+ MP P+ VW ALL +C++H N +MA+L
Sbjct: 388 YKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAEL 447
Query: 466 AASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
A +++ + N G YV +SN + ++ + + +R +M+ER K S+V
Sbjct: 448 AFAKVIEFEPN-NIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYV 500
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 261 bits (667), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 147/476 (30%), Positives = 254/476 (53%), Gaps = 11/476 (2%)
Query: 49 SSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAY 108
S G I H+LK +++ + ++ C + AR+VFD+ + L ++N +I Y
Sbjct: 173 SLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGY 232
Query: 109 LKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKA 168
K G+ E+++ + + + G K D T ++ + + LGDL R
Sbjct: 233 KKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSM--------LGDLNRGKEFYEYVK 284
Query: 169 DVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAEC 228
+ + L AL D + K G I AR +FD + ++ ++S T++ISGY GL +
Sbjct: 285 ENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRK 344
Query: 229 IFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVA 288
+F +KD+V++NAMI G S ++ +L ++ +MQ N +P+ T + ACS +
Sbjct: 345 LFDDMEEKDVVLWNAMIGG-SVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLG 403
Query: 289 AFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMID 348
A +VG + + K ++ LG++L+DMY+KCG + ++ VF + +N ++T++I
Sbjct: 404 ALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIG 463
Query: 349 GYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKV 408
G +G A+ F +M I+ G+ P+ +TF+ LSAC H G++ G + F M++ + +
Sbjct: 464 GLALHGDASTAISYFNEM-IDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNL 522
Query: 409 KPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAAS 468
P+++HY+ +VDLLGRAG L +A + MP ++ VW ALL CR+HGN E+ + AA
Sbjct: 523 NPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAK 582
Query: 469 ELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWVGADSV 524
+L +L+ + G YV L A W+ R +M ERG+ K CS + + +
Sbjct: 583 KLLELDPSD-SGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGI 637
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 259 bits (661), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 152/475 (32%), Positives = 257/475 (54%), Gaps = 46/475 (9%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G +H++ +K ++ ++ L+ +Y KC+CL AR+VFD + +N MI Y +
Sbjct: 369 GTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSR 428
Query: 111 QG---QVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILK 167
G ++ E+L + R + + TF +L+AS S + LG L + +H + K
Sbjct: 429 LGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASAS-----LTSLG-LSKQIHGLMFK 482
Query: 168 ADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAE 227
++++ + + ++LI Y N KD+
Sbjct: 483 YGLNLD---------------------------------IFAGSALIDVYSNCYCLKDSR 509
Query: 228 CIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMV 287
+F + KD+V++N+M GY + SE +L +++++Q RP+ TFA+++ A +
Sbjct: 510 LVFDEMKVKDLVIWNSMFAGYVQQSE-NEEALNLFLELQLSRERPDEFTFANMVTAAGNL 568
Query: 288 AAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMI 347
A+ ++GQ+ QL+K + + +AL+DMY+KCG D+ + FD ++V W S+I
Sbjct: 569 ASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVI 628
Query: 348 DGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYK 407
Y +G +AL++ +KM E G+ PN++TF+ LSAC+HAGLV+ GL+ F+ M +
Sbjct: 629 SSYANHGEGKKALQMLEKMMSE-GIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFG 686
Query: 408 VKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAA 467
++P EHY C+V LLGRAGRLN+A E + +MP +P + VW +LLS C GN E+A+ AA
Sbjct: 687 IEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAA 746
Query: 468 SELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWVGAD 522
E+ L+ G++ LSN A+ W ++RE MK G+ K+ SW+G +
Sbjct: 747 -EMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGIN 800
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 168/352 (47%), Gaps = 44/352 (12%)
Query: 39 LQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTL 98
LQ + D +H I+ G +T +S L+ LY + + YAR+VF+ + ++ L
Sbjct: 51 LQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNL 110
Query: 99 SAYNYMIGAYLKQGQVEESLGLVRRLL-VSGEKLDGFTFSMILKASTSTSGRNVAPLGDL 157
+++ M+ A G EESL + + + + S ++A + GR
Sbjct: 111 VSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGR-------- 162
Query: 158 GR--IVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLIS 215
GR + +Q ++D + T L D Y+K+G I YAR VFD + EK+ ++ T++IS
Sbjct: 163 GRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMIS 222
Query: 216 GYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNIS 275
G + G + SL+++ + N P+
Sbjct: 223 GCVKMGR--------------------------------SYVSLQLFYQLMEDNVVPDGY 250
Query: 276 TFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHM 335
++++ ACS++ E G+Q+ + +++ L + LID Y KCGRV+ + ++F+ M
Sbjct: 251 ILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGM 310
Query: 336 HQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACA 387
KN+ SWT+++ GY +N EA+ELF M ++G+ P+ S L++CA
Sbjct: 311 PNKNIISWTTLLSGYKQNALHKEAMELFTSMS-KFGLKPDMYACSSILTSCA 361
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 133/498 (26%), Positives = 224/498 (44%), Gaps = 52/498 (10%)
Query: 23 LQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNC 82
L + VP +LS L G+ IH+HIL+ G + ++ L+ Y+KC
Sbjct: 240 LMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGR 299
Query: 83 LRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKA 142
+ A ++F+ + +K + ++ ++ Y + +E++ L + G K D + S IL
Sbjct: 300 VIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSIL-- 357
Query: 143 STSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVM 202
TS ++ LG G VH +KA++ D + +L D Y K + AR VFD+
Sbjct: 358 ---TSCASLHALG-FGTQVHAYTIKANLG--NDSYVTNSLIDMYAKCDCLTDARKVFDIF 411
Query: 203 SEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSK--TSECATRSLE 260
+ D+V+FNAMIEGYS+ T +L
Sbjct: 412 AAA-------------------------------DVVLFNAMIEGYSRLGTQWELHEALN 440
Query: 261 VYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYS 320
++ DM+ RP++ TF S++ A + + + + +Q+ + K I GSALID+YS
Sbjct: 441 IFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYS 500
Query: 321 KCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFL 380
C + DSR VFD M K++ W SM GY + +EAL LF ++Q+ P+ TF
Sbjct: 501 NCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRE-RPDEFTFA 559
Query: 381 SALSACAHAGLVDKGLEIF-QSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMP 439
+ ++A + V G E Q ++ + P + + ++D+ + G A +
Sbjct: 560 NMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITN--ALLDMYAKCGSPEDAHKAFDSAA 617
Query: 440 ERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVS 499
R + W +++SS HG K A L K+ + G Y+ L+A V
Sbjct: 618 SR-DVVCWNSVISSYANHGE---GKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVE 673
Query: 500 E-LR--EVMKERGISKDT 514
+ L+ E+M GI +T
Sbjct: 674 DGLKQFELMLRFGIEPET 691
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 141/307 (45%), Gaps = 62/307 (20%)
Query: 160 IVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMN 219
+VH QI+ + E D L L + Y + G + YAR VF+ M E+N++S ++++S +
Sbjct: 65 VVHGQIIVWGL--ELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNH 122
Query: 220 QGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNF-RPNISTFA 278
G++++ SL V+++ R PN +
Sbjct: 123 HGIYEE--------------------------------SLVVFLEFWRTRKDSPNEYILS 150
Query: 279 SIIGACSMVAAFEVGQ--QVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMH 336
S I ACS + Q+QS L+K+ F + +G+ LID Y K G + +R VFD +
Sbjct: 151 SFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALP 210
Query: 337 QKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACA--------- 387
+K+ +WT+MI G K G +L+LF ++ +E VVP+ + LSAC+
Sbjct: 211 EKSTVTWTTMISGCVKMGRSYVSLQLFYQL-MEDNVVPDGYILSTVLSACSILPFLEGGK 269
Query: 388 --HAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSD 445
HA ++ GLE+ S+ N ++D + GR+ A + MP + N
Sbjct: 270 QIHAHILRYGLEMDASLMN------------VLIDSYVKCGRVIAAHKLFNGMPNK-NII 316
Query: 446 VWAALLS 452
W LLS
Sbjct: 317 SWTTLLS 323
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 259 bits (661), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 152/486 (31%), Positives = 255/486 (52%), Gaps = 42/486 (8%)
Query: 34 LLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDL 93
L+ LQ + + H I++ + + L+ Y KC + ARQVFD +
Sbjct: 63 LVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGM 122
Query: 94 RDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAP 153
+++L ++N MIG Y + E+L + + G K FT S +L A
Sbjct: 123 LERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSA----------- 171
Query: 154 LGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSL 213
V D + C L VK T D+ N+ T+L
Sbjct: 172 ----------------CGVNCDALECKKLHCLSVK--------TCIDL----NLYVGTAL 203
Query: 214 ISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPN 273
+ Y G+ KDA +F+ DK V +++M+ GY + +L +Y QR++ N
Sbjct: 204 LDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKN-YEEALLLYRRAQRMSLEQN 262
Query: 274 ISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFD 333
T +S+I ACS +AA G+Q+ + + K+ F ++ + S+ +DMY+KCG + +S +F
Sbjct: 263 QFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFS 322
Query: 334 HMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVD 393
+ +KN+ W ++I G+ K+ P E + LF+KMQ + G+ PN VTF S LS C H GLV+
Sbjct: 323 EVQEKNLELWNTIISGFAKHARPKEVMILFEKMQ-QDGMHPNEVTFSSLLSVCGHTGLVE 381
Query: 394 KGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSS 453
+G F+ M Y + P + HY+C+VD+LGRAG L++A+E + +P P + +W +LL+S
Sbjct: 382 EGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLAS 441
Query: 454 CRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKD 513
CR++ N E+A++AA +LF+L G +V LSN AA ++W+ +++ R+++++ + K
Sbjct: 442 CRVYKNLELAEVAAEKLFELEPEN-AGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKV 500
Query: 514 TACSWV 519
SW+
Sbjct: 501 RGKSWI 506
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 258 bits (660), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 143/449 (31%), Positives = 251/449 (55%), Gaps = 42/449 (9%)
Query: 73 LLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLD 132
L+V+Y +C + + VF +R++ + ++N MI A+++ G +E L LV + G K+D
Sbjct: 359 LMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKID 418
Query: 133 GFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRI 192
T + +L A+++ + ++G+ H +++ + E + + L D Y K+G I
Sbjct: 419 YITVTALLSAASNLRNK------EIGKQTHAFLIRQGIQFEG---MNSYLIDMYSKSGLI 469
Query: 193 AYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTS 252
++ +F+ SGY ++D +N+MI GY++
Sbjct: 470 RISQKLFEG-------------SGY----------------AERDQATWNSMISGYTQNG 500
Query: 253 ECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLG 312
++ V+ M N RPN T ASI+ ACS + + ++G+Q+ ++ ++ +
Sbjct: 501 H-TEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVA 559
Query: 313 SALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGV 372
SAL+DMYSK G + + +F ++N ++T+MI GYG++G + A+ LF MQ E G+
Sbjct: 560 SALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQ-ESGI 618
Query: 373 VPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAW 432
P+ +TF++ LSAC+++GL+D+GL+IF+ M Y ++P EHY C+ D+LGR GR+N+A+
Sbjct: 619 KPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAY 678
Query: 433 EFVMRMPERPN-SDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAY-VALSNTLA 490
EFV + E N +++W +LL SC+LHG E+A+ + L K + Y V LSN A
Sbjct: 679 EFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYA 738
Query: 491 AAEKWDSVSELREVMKERGISKDTACSWV 519
+KW SV ++R M+E+G+ K+ S +
Sbjct: 739 EEQKWKSVDKVRRGMREKGLKKEVGRSGI 767
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 131/485 (27%), Positives = 228/485 (47%), Gaps = 80/485 (16%)
Query: 36 SNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKC----NCLRY--ARQV 89
S+TL+ + +G+ +H H+++ + + L+ +Y+ C +C Y R+V
Sbjct: 111 SSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKV 170
Query: 90 FDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGR 149
FD++R K + A+N +I Y+K G+ E+ R+ G M +K S S
Sbjct: 171 FDNMRRKNVVAWNTLISWYVKTGRNAEA---CRQF--------GIMMRMEVKPS-PVSFV 218
Query: 150 NVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVIS 209
NV P + R I KA+V L L D YVK+ +F V
Sbjct: 219 NVFPAVSISR----SIKKANVFYG----LMLKLGDEYVKD--------LFVV-------- 254
Query: 210 STSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLN 269
+S IS Y G + + +F V+++I V+N MI Y + ++C S+E++++ +
Sbjct: 255 -SSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQ-NDCLVESIELFLEA--IG 310
Query: 270 FRPNISTFASIIGACSMVAAF---EVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVV 326
+ +S + + A S V+A E+G+Q + K I + ++L+ MYS+CG V
Sbjct: 311 SKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVH 370
Query: 327 DSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSAC 386
S VF M +++V SW +MI + +NG DE L L +MQ + G +++T + LSA
Sbjct: 371 KSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ-KQGFKIDYITVTALLSAA 429
Query: 387 A-----------HAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAG--RLNQAWE 433
+ HA L+ +G++ F+ M N Y ++D+ ++G R++Q
Sbjct: 430 SNLRNKEIGKQTHAFLIRQGIQ-FEGM-NSY-----------LIDMYSKSGLIRISQKLF 476
Query: 434 FVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAE 493
ER + W +++S +G+TE L ++ L N RP A V +++ L A
Sbjct: 477 EGSGYAERDQA-TWNSMISGYTQNGHTEKTFLVFRKM--LEQNIRPNA-VTVASILPACS 532
Query: 494 KWDSV 498
+ SV
Sbjct: 533 QIGSV 537
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 181/419 (43%), Gaps = 59/419 (14%)
Query: 86 ARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSG--EKLDGFTFSMILKAS 143
ARQ+FD + T +N +I ++ E+L R+ + D +T+S LKA
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 144 TSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVK--NGRIAY----ART 197
T +N+ G+ VH +++ + + V+ +L + YV N + R
Sbjct: 118 AET--KNLKA----GKAVHCHLIRCLQNSSR--VVHNSLMNMYVSCLNAPDCFEYDVVRK 169
Query: 198 VFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATR 257
VFD M KNV V +N +I Y KT A
Sbjct: 170 VFDNMRRKNV-------------------------------VAWNTLISWYVKTGRNAEA 198
Query: 258 SLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMK--TPFFGHIKLGSAL 315
+ I M R+ +P+ +F ++ A S+ + + ++K + + + S+
Sbjct: 199 CRQFGI-MMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSA 257
Query: 316 IDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPN 375
I MY++ G + SRRVFD ++N+ W +MI Y +N E++ELF + +V +
Sbjct: 258 ISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSD 317
Query: 376 FVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFV 435
VT+L A SA + V+ G + + ++ P + + +V + R G +++++
Sbjct: 318 EVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMV-MYSRCGSVHKSFGVF 376
Query: 436 MRMPERPNSDV--WAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAA 492
+ M ER DV W ++S+ +G + + E+ K G Y+ ++ L+AA
Sbjct: 377 LSMRER---DVVSWNTMISAFVQNGLDDEGLMLVYEMQK---QGFKIDYITVTALLSAA 429
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 258 bits (660), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 143/466 (30%), Positives = 243/466 (52%), Gaps = 41/466 (8%)
Query: 54 IHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQ 113
H+HI+K G + + L+ Y +A ++FD DK + + MI +++ G
Sbjct: 125 FHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGS 184
Query: 114 VEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVE 173
E++ + +G + T +LKA+ GR VH
Sbjct: 185 ASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVR------FGRSVH----------- 227
Query: 174 KDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKT 233
Y++ GR+ + +V +SL+ Y + DA+ +F +
Sbjct: 228 ----------GLYLETGRV-----------KCDVFIGSSLVDMYGKCSCYDDAQKVFDEM 266
Query: 234 VDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVG 293
+++V + A+I GY + S C + + V+ +M + + PN T +S++ AC+ V A G
Sbjct: 267 PSRNVVTWTALIAGYVQ-SRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRG 325
Query: 294 QQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKN 353
++V ++K + G+ LID+Y KCG + ++ VF+ +H+KNV++WT+MI+G+ +
Sbjct: 326 RRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAH 385
Query: 354 GFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRME 413
G+ +A +LF M + V PN VTF++ LSACAH GLV++G +F SM+ + ++P+ +
Sbjct: 386 GYARDAFDLFYTM-LSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKAD 444
Query: 414 HYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKL 473
HYAC+VDL GR G L +A + RMP P + VW AL SC LH + E+ K AAS + KL
Sbjct: 445 HYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKL 504
Query: 474 NANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
+ G Y L+N + ++ WD V+ +R+ MK++ + K SW+
Sbjct: 505 QPS-HSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWI 549
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%)
Query: 27 DFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYA 86
D P+ LS+ L + G+ +H +++K NT L+ LY+KC CL A
Sbjct: 301 DVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEA 360
Query: 87 RQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKA 142
VF+ L +K + + MI + G ++ L +L S + TF +L A
Sbjct: 361 ILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSA 416
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 258 bits (659), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 146/474 (30%), Positives = 259/474 (54%), Gaps = 16/474 (3%)
Query: 49 SSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAY 108
S + +H +++ GF + + ++ Y KC+ + AR+VFD++ ++ + ++N MI Y
Sbjct: 149 SLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGY 208
Query: 109 LKQGQVEESLGLVRRLLVSGE-KLDGFTFSMILKASTSTSGRNVAPLGDL--GRIVHVQI 165
+ G E+ + + +L + K +G T + +A +S DL G VH ++
Sbjct: 209 SQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSS--------DLIFGLEVHKKM 260
Query: 166 LKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKD 225
++ + + D LC A+ Y K G + YAR +FD MSEK+ ++ ++ISGYM GL K+
Sbjct: 261 IENHI--QMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKE 318
Query: 226 AECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACS 285
A +F + + +NAMI G + + + + +M R RPN T +S++ + +
Sbjct: 319 AMALFSEMESIGLSTWNAMISGLMQNNH-HEEVINSFREMIRCGSRPNTVTLSSLLPSLT 377
Query: 286 MVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTS 345
+ + G+++ + ++ +I + +++ID Y+K G ++ ++RVFD+ +++ +WT+
Sbjct: 378 YSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTA 437
Query: 346 MIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENE 405
+I Y +G D A LF +MQ G P+ VT + LSA AH+G D IF SM +
Sbjct: 438 IITAYAVHGDSDSACSLFDQMQC-LGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTK 496
Query: 406 YKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKL 465
Y ++P +EHYAC+V +L RAG+L+ A EF+ +MP P + VW ALL+ + G+ E+A+
Sbjct: 497 YDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARF 556
Query: 466 AASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
A LF++ G Y ++N A +W+ +R MK G+ K SW+
Sbjct: 557 ACDRLFEMEPE-NTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWI 609
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 112/467 (23%), Positives = 200/467 (42%), Gaps = 86/467 (18%)
Query: 39 LQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTL 98
+Q++ P +H+ I+ P+ ++ KL+ Y + + R A VFD++ +
Sbjct: 29 IQHFTRHRLPLHVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNA 88
Query: 99 SAYNYMIGAYLKQGQVEESLGLVRRLLVS------GEKLDGFTFSMILKASTSTSGRNVA 152
+YN ++ AY + ++ L + S + D + S +LKA SG +
Sbjct: 89 FSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKA---LSGCDDF 145
Query: 153 PLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTS 212
LG L R VH +++ D D + + Y K I AR VFD MSE++V+S S
Sbjct: 146 WLGSLARQVHGFVIRGGFD--SDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNS 203
Query: 213 LISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRP 272
+ISGY G F+D + +++ AM+ C+ +F+P
Sbjct: 204 MISGYSQSGSFEDCKKMYK-----------AML-------ACS-------------DFKP 232
Query: 273 NISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVF 332
N T S+ AC + G +V ++++ + L +A+I Y+KCG + +R +F
Sbjct: 233 NGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALF 292
Query: 333 DHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQ------------------------- 367
D M +K+ ++ ++I GY +G EA+ LF +M+
Sbjct: 293 DEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVIN 352
Query: 368 -----IEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQ------SMENEYKVKPRMEHYA 416
I G PN VT S L + ++ + G EI + N Y +++YA
Sbjct: 353 SFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYA 412
Query: 417 CVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMA 463
+ LLG + V + + W A++++ +HG+++ A
Sbjct: 413 KLGFLLGA--------QRVFDNCKDRSLIAWTAIITAYAVHGDSDSA 451
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 145/316 (45%), Gaps = 34/316 (10%)
Query: 161 VHVQILKADV---DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGY 217
+HV L A + ++ D+ L + L Y + R A VFD ++ +N S +L+ Y
Sbjct: 39 LHVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAY 98
Query: 218 MNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTF 277
++ ++ DA +F + I +S+ A RP+ +
Sbjct: 99 TSREMYFDA-----------FSLFLSWIGSSCYSSDAA---------------RPDSISI 132
Query: 278 ASIIGACSMVAAFEVG---QQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDH 334
+ ++ A S F +G +QV +++ F + +G+ +I Y+KC + +R+VFD
Sbjct: 133 SCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDE 192
Query: 335 MHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDK 394
M +++V SW SMI GY ++G ++ ++++ M PN VT +S AC + +
Sbjct: 193 MSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIF 252
Query: 395 GLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSC 454
GLE+ + M E ++ + V+ + G L+ A M E+ +S + A++S
Sbjct: 253 GLEVHKKM-IENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEK-DSVTYGAIISGY 310
Query: 455 RLHGNTEMAKLAASEL 470
HG + A SE+
Sbjct: 311 MAHGLVKEAMALFSEM 326
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 60/123 (48%)
Query: 30 PHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQV 89
P++ LS+ L S G+ IH+ ++ G N ++ ++ Y K L A++V
Sbjct: 364 PNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRV 423
Query: 90 FDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGR 149
FD+ +D++L A+ +I AY G + + L ++ G K D T + +L A +
Sbjct: 424 FDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDS 483
Query: 150 NVA 152
++A
Sbjct: 484 DMA 486
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 151/513 (29%), Positives = 266/513 (51%), Gaps = 48/513 (9%)
Query: 10 FSSRALFSPHQPFLQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNI 69
+++RA H+ Q P+ LS+ L+ N + G +H ++K G + +
Sbjct: 91 YNARAWECFHEMVKQGTS--PNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYV 148
Query: 70 SIKLLVLYLKCNC-LRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSG 128
++ +Y C+ + A +F D++ K + +I + G L + +++L+
Sbjct: 149 DNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLEN 208
Query: 129 EKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVK 188
++ + ++ ++AS S G+ +H ++K
Sbjct: 209 AEVTPYCITIAVRASASIDSVTT------GKQIHASVIKRGF------------------ 244
Query: 189 NGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGY 248
+ N+ S++ Y G +A+ F + DKD++ +N +I
Sbjct: 245 ---------------QSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISEL 289
Query: 249 SKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGH 308
++ ++ +L ++ + F PN TF S++ AC+ +AA GQQ+ ++ + F +
Sbjct: 290 ERSD--SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKN 347
Query: 309 IKLGSALIDMYSKCGRVVDSRRVFDHM-HQKNVFSWTSMIDGYGKNGFPDEALELFQKMQ 367
++L +ALIDMY+KCG + DS+RVF + ++N+ SWTSM+ GYG +G+ EA+ELF KM
Sbjct: 348 VELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKM- 406
Query: 368 IEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGR 427
+ G+ P+ + F++ LSAC HAGLV+KGL+ F ME+EY + P + Y CVVDLLGRAG+
Sbjct: 407 VSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGK 466
Query: 428 LNQAWEFVMRMPERPNSDVWAALLSSCRLHG-NTEMAKLAASELFKLNANGRPGAYVALS 486
+ +A+E V RMP +P+ W A+L +C+ H N +++LAA ++ +L G YV LS
Sbjct: 467 IGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPK-MVGTYVMLS 525
Query: 487 NTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
AA KW + +R++M+ G K+ SW+
Sbjct: 526 YIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWI 558
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 131/260 (50%), Gaps = 7/260 (2%)
Query: 204 EKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYI 263
+K+ I +T+LI Y +GL ++A +F + D+D+V + AMI GY+ +S R+ E +
Sbjct: 42 KKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYA-SSNYNARAWECFH 100
Query: 264 DMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCG 323
+M + PN T +S++ +C + G V ++K G + + +A+++MY+ C
Sbjct: 101 EMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCS 160
Query: 324 RVVDSR-RVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYG-VVPNFVTFLS 381
+++ +F + KN +WT++I G+ G L+++++M +E V P +T
Sbjct: 161 VTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITI-- 218
Query: 382 ALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPER 441
A+ A A V G +I S+ + + ++DL R G L++A + M ++
Sbjct: 219 AVRASASIDSVTTGKQIHASVIKR-GFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDK 277
Query: 442 PNSDVWAALLSSCRLHGNTE 461
+ W L+S ++E
Sbjct: 278 -DLITWNTLISELERSDSSE 296
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 255 bits (652), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 159/563 (28%), Positives = 281/563 (49%), Gaps = 79/563 (14%)
Query: 31 HSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVF 90
+ + + LQ N + + G+ IH ++L+ G N ++ L+V+Y + L +R+VF
Sbjct: 88 YDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVF 147
Query: 91 DDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMI----------- 139
+ ++D+ LS++N ++ +Y K G V++++GL+ + + G K D T++ +
Sbjct: 148 NSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSK 207
Query: 140 -------------LKASTSTSG---RNVAPLG--DLGRIVHVQILKA----DVDVEKDDV 177
LK STS+ + VA G LG+ +H IL+ DV VE
Sbjct: 208 DAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVE---- 263
Query: 178 LCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF----QKT 233
T L D Y+K G + YAR VFD+M KN+++ SL+SG L KDAE + ++
Sbjct: 264 --TTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEG 321
Query: 234 VDKDIVVFNAMIEGYSKT-----------------------------SECAT-----RSL 259
+ D + +N++ GY+ S C+ +L
Sbjct: 322 IKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNAL 381
Query: 260 EVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMY 319
+V+I MQ PN +T ++++ ++ G++V ++ + +AL+DMY
Sbjct: 382 KVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMY 441
Query: 320 SKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTF 379
K G + + +F + K++ SW M+ GY G +E + F M +E G+ P+ +TF
Sbjct: 442 GKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVM-LEAGMEPDAITF 500
Query: 380 LSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMP 439
S LS C ++GLV +G + F M + Y + P +EH +C+VDLLGR+G L++AW+F+ M
Sbjct: 501 TSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMS 560
Query: 440 ERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVS 499
+P++ +W A LSSC++H + E+A++A L L + Y+ + N + +W+ V
Sbjct: 561 LKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPH-NSANYMMMINLYSNLNRWEDVE 619
Query: 500 ELREVMKERGISKDTACSWVGAD 522
+R +M+ + SW+ D
Sbjct: 620 RIRNLMRNNRVRVQDLWSWIQID 642
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 202/409 (49%), Gaps = 19/409 (4%)
Query: 51 GQTIHSHILKTGF-VPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYL 109
G TIH ++K G +T + + Y +C L +A ++FD++ + A+N ++ L
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 110 KQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKAD 169
+ G E+++ L R + SG K T +L+ ++ G GR +H +L+
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAE------GRQIHGYVLR-- 117
Query: 170 VDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECI 229
+ +E + +C +L Y +NG++ +R VF+ M ++N+ S S++S Y G DA +
Sbjct: 118 LGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGL 177
Query: 230 FQKT----VDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACS 285
+ + DIV +N+++ GY+ + + ++ V MQ +P+ S+ +S++ A +
Sbjct: 178 LDEMEICGLKPDIVTWNSLLSGYA-SKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVA 236
Query: 286 MVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTS 345
++G+ + +++ + + + + LIDMY K G + +R VFD M KN+ +W S
Sbjct: 237 EPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNS 296
Query: 346 MIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENE 405
++ G +A L +M+ E G+ P+ +T+ S S A G +K L++ M+ E
Sbjct: 297 LVSGLSYACLLKDAEALMIRMEKE-GIKPDAITWNSLASGYATLGKPEKALDVIGKMK-E 354
Query: 406 YKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPER---PNSDVWAALL 451
V P + + + + G A + ++M E PN+ + LL
Sbjct: 355 KGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 254 bits (650), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 163/482 (33%), Positives = 258/482 (53%), Gaps = 14/482 (2%)
Query: 49 SSGQTIHSHILKTGFVPNTNISIKLLV-LYLKCNCLRYARQVFDDLRDKTLSAYNYMIGA 107
S + IH HI+ +G + N LV Y++ A +VF + +S++N MI
Sbjct: 147 SEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVG 206
Query: 108 YLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILK 167
Y KQG E+L L +++ G + D +T +L S LG+ VH I +
Sbjct: 207 YAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIR------LGKGVHGWIER 260
Query: 168 ADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAE 227
+ +L AL D Y K A+ FD M +K++ S +++ G++ G + A+
Sbjct: 261 RGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQ 320
Query: 228 CIFQKTVDKDIVVFNAMIEGYSKTSECATRSL-EVYIDMQRL-NFRPNISTFASIIGACS 285
+F + +D+V +N+++ GYSK C R++ E++ +M + +P+ T S+I +
Sbjct: 321 AVFDQMPKRDLVSWNSLLFGYSKKG-CDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAA 379
Query: 286 MVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTS 345
G+ V +++ G L SALIDMY KCG + + VF +K+V WTS
Sbjct: 380 NNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTS 439
Query: 346 MIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENE 405
MI G +G +AL+LF +MQ E GV PN VT L+ L+AC+H+GLV++GL +F M+++
Sbjct: 440 MITGLAFHGNGQQALQLFGRMQ-EEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDK 498
Query: 406 YKVKPRMEHYACVVDLLGRAGRLNQAWEFVM-RMPERPNSDVWAALLSSCRLHGNTEMAK 464
+ P EHY +VDLL RAGR+ +A + V +MP RP+ +W ++LS+CR + E A+
Sbjct: 499 FGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAE 558
Query: 465 LAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTA-CSWVGADS 523
LA +EL KL + G YV LSN A +W + RE M+ RG+ K S VG +
Sbjct: 559 LALTELLKLEPE-KEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEG 617
Query: 524 VY 525
++
Sbjct: 618 LH 619
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 153/472 (32%), Positives = 258/472 (54%), Gaps = 24/472 (5%)
Query: 49 SSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAY 108
S G I+ +K+ + ++ + +Y KC L A +VFD++R + ++N +I A+
Sbjct: 399 SEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAH 458
Query: 109 LKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKA 168
+ G+ E+L L +L S + D FTF ILKA T S LG G +H I+K+
Sbjct: 459 EQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGS------LG-YGMEIHSSIVKS 511
Query: 169 DVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAEC 228
+ V C+ L D Y K G I A + ++ +S G ++ E
Sbjct: 512 GM-ASNSSVGCS-LIDMYSKCGMIEEAEKIHSRFFQRANVS-----------GTMEELEK 558
Query: 229 IFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVA 288
+ K + + V +N++I GY + + ++ M + P+ T+A+++ C+ +A
Sbjct: 559 MHNKRLQEMCVSWNSIISGYVMKEQSEDAQM-LFTRMMEMGITPDKFTYATVLDTCANLA 617
Query: 289 AFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMID 348
+ +G+Q+ +Q++K + + S L+DMYSKCG + DSR +F+ +++ +W +MI
Sbjct: 618 SAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMIC 677
Query: 349 GYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKV 408
GY +G +EA++LF++M +E + PN VTF+S L ACAH GL+DKGLE F M+ +Y +
Sbjct: 678 GYAHHGKGEEAIQLFERMILE-NIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGL 736
Query: 409 KPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLH-GNTEMAKLAA 467
P++ HY+ +VD+LG++G++ +A E + MP + +W LL C +H N E+A+ A
Sbjct: 737 DPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEAT 796
Query: 468 SELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
+ L +L+ AY LSN A A W+ VS+LR M+ + K+ CSWV
Sbjct: 797 AALLRLDPQD-SSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWV 847
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 187/435 (42%), Gaps = 68/435 (15%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G +H+H LK+ F + + L +Y KC+ ++ A+ +FD+ + +YN MI Y +
Sbjct: 300 GGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQ 359
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
+ ++L L RL+ SG D + S + +A G L + + L
Sbjct: 360 EEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKG--------LSEGLQIYGLAIKS 411
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
+ D + A D Y K +A A VFD M ++ +S ++I+ + G
Sbjct: 412 SLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNG--------- 462
Query: 231 QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAF 290
+GY +L +++ M R P+ TF SI+ AC+ +
Sbjct: 463 ---------------KGY--------ETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSL 498
Query: 291 EVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRV----------------FDH 334
G ++ S ++K+ + +G +LIDMYSKCG + ++ ++ +
Sbjct: 499 GYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEK 558
Query: 335 MHQKNV----FSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAG 390
MH K + SW S+I GY ++A LF +M +E G+ P+ T+ + L CA+
Sbjct: 559 MHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRM-MEMGITPDKFTYATVLDTCANLA 617
Query: 391 LVDKGLEIFQSMENEYKVKPRMEHYAC--VVDLLGRAGRLNQAWEFVMRMPERPNSDVWA 448
G +I + K + + + Y C +VD+ + G L+ + + R + W
Sbjct: 618 SAGLGKQIHAQV---IKKELQSDVYICSTLVDMYSKCGDLHDS-RLMFEKSLRRDFVTWN 673
Query: 449 ALLSSCRLHGNTEMA 463
A++ HG E A
Sbjct: 674 AMICGYAHHGKGEEA 688
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/443 (23%), Positives = 196/443 (44%), Gaps = 82/443 (18%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDD--LRD------------- 95
G+ H+H++ +GF P T + LL +Y A VFD LRD
Sbjct: 67 GKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSK 126
Query: 96 ----------------KTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMI 139
+ + ++N M+ YL+ G+ +S+ + + G + DG TF++I
Sbjct: 127 SNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAII 186
Query: 140 LKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVF 199
LK + + LG +H +++ D D V +AL D Y K R + VF
Sbjct: 187 LKVCSFLEDTS------LGMQIHGIVVRVGCDT--DVVAASALLDMYAKGKRFVESLRVF 238
Query: 200 DVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSL 259
+ EKN +S +++I+G + L + +L
Sbjct: 239 QGIPEKNSVSWSAIIAGCVQNNLL--------------------------------SLAL 266
Query: 260 EVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMY 319
+ + +MQ++N + S +AS++ +C+ ++ +G Q+ + +K+ F + +A +DMY
Sbjct: 267 KFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMY 326
Query: 320 SKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTF 379
+KC + D++ +FD+ N S+ +MI GY + +AL LF ++ + G+ + ++
Sbjct: 327 AKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRL-MSSGLGFDEISL 385
Query: 380 LSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACV----VDLLGRAGRLNQAWEFV 435
ACA + +GL+I+ +K + CV +D+ G+ L +A+
Sbjct: 386 SGVFRACALVKGLSEGLQIYG-----LAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVF 440
Query: 436 MRMPERPNSDVWAALLSSCRLHG 458
M R ++ W A++++ +G
Sbjct: 441 DEM-RRRDAVSWNAIIAAHEQNG 462
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 117/233 (50%), Gaps = 6/233 (2%)
Query: 156 DLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLIS 215
+LG+ H ++ + + L Y + A VFD M ++V+S +I+
Sbjct: 65 ELGKQAHAHMIISGF--RPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMIN 122
Query: 216 GYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNIS 275
GY A F +D+V +N+M+ GY + E + +S+EV++DM R +
Sbjct: 123 GYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGE-SLKSIEVFVDMGREGIEFDGR 181
Query: 276 TFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHM 335
TFA I+ CS + +G Q+ +++ + SAL+DMY+K R V+S RVF +
Sbjct: 182 TFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGI 241
Query: 336 HQKNVFSWTSMIDGYGKNGFPDEALELFQKMQ-IEYGVVPNFVTFLSALSACA 387
+KN SW+++I G +N AL+ F++MQ + GV + + S L +CA
Sbjct: 242 PEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI--YASVLRSCA 292
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 113/271 (41%), Gaps = 48/271 (17%)
Query: 268 LNFRPNIST--FASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRV 325
LN ++ST F+ + C+ A E+G+Q + ++ + F + + L+ +Y+
Sbjct: 40 LNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDF 99
Query: 326 VDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSA 385
V + VFD M ++V SW MI+GY K+ +A F M V + V++ S LS
Sbjct: 100 VSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMP-----VRDVVSWNSMLSG 154
Query: 386 CAHAGLVDKGLEIFQSMENE------------YKVKPRMEHYA----------------- 416
G K +E+F M E KV +E +
Sbjct: 155 YLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTD 214
Query: 417 -----CVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELF 471
++D+ + R ++ +PE+ NS W+A+++ C + +A E+
Sbjct: 215 VVAASALLDMYAKGKRFVESLRVFQGIPEK-NSVSWSAIIAGCVQNNLLSLALKFFKEMQ 273
Query: 472 KLNANGRPGAYVALSNTLAAAEKWDSVSELR 502
K+NA Y ++ + AA +SELR
Sbjct: 274 KVNAGVSQSIYASVLRSCAA------LSELR 298
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/435 (31%), Positives = 239/435 (54%), Gaps = 46/435 (10%)
Query: 87 RQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTST 146
R+VF+ + K + +YN +I Y + G E++L +VR + + K D FT S +L
Sbjct: 196 RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI---- 251
Query: 147 SGRNVAPLGDL--GRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSE 204
+ D+ G+ +H +++ +D D + ++L D Y K+ RI
Sbjct: 252 ----FSEYVDVIKGKEIHGYVIRKGID--SDVYIGSSLVDMYAKSARI------------ 293
Query: 205 KNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYID 264
+D+E +F + +D + +N+++ GY + +L ++
Sbjct: 294 -------------------EDSERVFSRLYCRDGISWNSLVAGYVQNGR-YNEALRLFRQ 333
Query: 265 MQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGR 324
M +P F+S+I AC+ +A +G+Q+ +++ F +I + SAL+DMYSKCG
Sbjct: 334 MVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGN 393
Query: 325 VVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALS 384
+ +R++FD M+ + SWT++I G+ +G EA+ LF++M+ + GV PN V F++ L+
Sbjct: 394 IKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQ-GVKPNQVAFVAVLT 452
Query: 385 ACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNS 444
AC+H GLVD+ F SM Y + +EHYA V DLLGRAG+L +A+ F+ +M P
Sbjct: 453 ACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTG 512
Query: 445 DVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREV 504
VW+ LLSSC +H N E+A+ A ++F +++ GAYV + N A+ +W +++LR
Sbjct: 513 SVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENM-GAYVLMCNMYASNGRWKEMAKLRLR 571
Query: 505 MKERGISKDTACSWV 519
M+++G+ K ACSW+
Sbjct: 572 MRKKGLRKKPACSWI 586
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 204/451 (45%), Gaps = 32/451 (7%)
Query: 47 TPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIG 106
+ S + +H+ ++T + +T+ SI ++ +Y L A +F L+ + A+ +I
Sbjct: 20 SKSQAKQLHAQFIRTQSLSHTSASI-VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIR 78
Query: 107 AYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDL--GRIVHVQ 164
+ Q ++L + SG D F +LK+ T + DL G VH
Sbjct: 79 CFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTM--------MMDLRFGESVHGF 130
Query: 165 ILKADVDVEKDDVLCTALTDSYVK---NGRIAYARTVFDVMSEKNVISSTSLISG---YM 218
I++ +D D AL + Y K G VFD M ++ S + M
Sbjct: 131 IVRLGMDC--DLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIM 188
Query: 219 NQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFA 278
G+ +F+ KD+V +N +I GY++ S +L + +M + +P+ T +
Sbjct: 189 PFGI-DSVRRVFEVMPRKDVVSYNTIIAGYAQ-SGMYEDALRMVREMGTTDLKPDSFTLS 246
Query: 279 SIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQK 338
S++ S G+++ +++ + +GS+L+DMY+K R+ DS RVF ++ +
Sbjct: 247 SVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCR 306
Query: 339 NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEI 398
+ SW S++ GY +NG +EAL LF++M + V P V F S + ACAH + G ++
Sbjct: 307 DGISWNSLVAGYVQNGRYNEALRLFRQM-VTAKVKPGAVAFSSVIPACAHLATLHLGKQL 365
Query: 399 FQSMENEYKVK----PRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSC 454
+ Y ++ + + +VD+ + G + A + RM + W A++
Sbjct: 366 -----HGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM-NVLDEVSWTAIIMGH 419
Query: 455 RLHGNTEMAKLAASELFKLNANGRPGAYVAL 485
LHG+ A E+ + A+VA+
Sbjct: 420 ALHGHGHEAVSLFEEMKRQGVKPNQVAFVAV 450
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 170/417 (40%), Gaps = 80/417 (19%)
Query: 27 DFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYA 86
D P S LS+ L + G+ IH ++++ G + I L+ +Y K + +
Sbjct: 237 DLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDS 296
Query: 87 RQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTST 146
+VF L + ++N ++ Y++ G+ E+L L R+++ + K FS ++ A
Sbjct: 297 ERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACA-- 354
Query: 147 SGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKN 206
++A L LG+ +H +L+ + + +AL D Y K G I AR +FD M+ +
Sbjct: 355 ---HLATL-HLGKQLHGYVLRGGFG--SNIFIASALVDMYSKCGNIKAARKIFDRMNVLD 408
Query: 207 VISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQ 266
+S T++I G+ G +A +F+ +M+
Sbjct: 409 EVSWTAIIMGHALHGHGHEAVSLFE--------------------------------EMK 436
Query: 267 RLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVV 326
R +PN F +++ ACS H+ L ++ +V
Sbjct: 437 RQGVKPNQVAFVAVLTACS----------------------HVGLVDEAWGYFNSMTKVY 474
Query: 327 DSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSAC 386
+ +H + ++ D G+ G +EA KM +E P + + LS+C
Sbjct: 475 GLNQELEH--------YAAVADLLGRAGKLEEAYNFISKMCVE----PTGSVWSTLLSSC 522
Query: 387 AHAGLVDKGLEIFQSM-ENEYKVKPR-MEHYACVVDLLGRAGRLNQAWEFVMRMPER 441
+ V K LE+ + + E + V M Y + ++ GR + + +RM ++
Sbjct: 523 S----VHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKK 575
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 144/471 (30%), Positives = 248/471 (52%), Gaps = 53/471 (11%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G ++H +L+ GF + + + Y KC L AR+VF ++ ++ ++ ++ AY+K
Sbjct: 129 GSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVK 188
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
G++EE+ + ++ P +LG
Sbjct: 189 SGELEEAKSMF----------------------------DLMPERNLGS----------- 209
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
AL D VK+G + A+ +FD M ++++IS TS+I GY G A +F
Sbjct: 210 --------WNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLF 261
Query: 231 QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAF 290
++ D+ ++A+I GY++ + + +V+ +M N +P+ ++ ACS + F
Sbjct: 262 EEARGVDVRAWSALILGYAQNGQ-PNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCF 320
Query: 291 EVGQQVQSQLMK--TPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMID 348
E+ ++V S L + F H + ALIDM +KCG + + ++F+ M Q+++ S+ SM++
Sbjct: 321 ELCEKVDSYLHQRMNKFSSHYVV-PALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMME 379
Query: 349 GYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKV 408
G +G EA+ LF+KM ++ G+VP+ V F L C + LV++GL F+ M +Y +
Sbjct: 380 GMAIHGCGSEAIRLFEKM-VDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSI 438
Query: 409 KPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAAS 468
+HY+C+V+LL R G+L +A+E + MP ++ W +LL C LHGNTE+A++ A
Sbjct: 439 LASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVAR 498
Query: 469 ELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
LF+L G+YV LSN AA ++W V+ LR+ M E GI+K SW+
Sbjct: 499 HLFELEPQS-AGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
Query: 229 IFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNF-RPNISTFASIIGACSMV 287
+F++ ++N +I+GYS ++ + + M R RP+ TF ++ CS
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKF-LFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNN 123
Query: 288 AAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMI 347
VG V +++ F + +G++ +D Y KC + +R+VF M ++N SWT+++
Sbjct: 124 GQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALV 183
Query: 348 DGYGKNGFPDEALELFQKM 366
Y K+G +EA +F M
Sbjct: 184 VAYVKSGELEEAKSMFDLM 202
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 251 bits (642), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 154/469 (32%), Positives = 249/469 (53%), Gaps = 55/469 (11%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFD--DLRDKTLSAYNYMIGAYL 109
+ +H+ ++ G ++ + Y KC L A+ VF+ D D+T+ ++N M AY
Sbjct: 173 EAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYS 232
Query: 110 KQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQI--LK 167
G+ ++ GL +L K D TF + + S +N L GR++H L
Sbjct: 233 VFGEAFDAFGLYCLMLREEFKPDLSTF-----INLAASCQNPETLTQ-GRLIHSHAIHLG 286
Query: 168 ADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAE 227
D D+E + + Y K+ AR +FD+M+ + +S T +ISGY +G
Sbjct: 287 TDQDIEAINTFISM----YSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKG------ 336
Query: 228 CIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMV 287
+D+ + +F+AMI K+ E +P++ T S+I C
Sbjct: 337 -----DMDEALALFHAMI----KSGE-----------------KPDLVTLLSLISGCGKF 370
Query: 288 AAFEVGQQVQSQLMKTPFFG----HIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSW 343
+ E G+ + + + +G ++ + +ALIDMYSKCG + ++R +FD+ +K V +W
Sbjct: 371 GSLETGKWIDA---RADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTW 427
Query: 344 TSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSME 403
T+MI GY NG EAL+LF KM I+ PN +TFL+ L ACAH+G ++KG E F M+
Sbjct: 428 TTMIAGYALNGIFLEALKLFSKM-IDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMK 486
Query: 404 NEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMA 463
Y + P ++HY+C+VDLLGR G+L +A E + M +P++ +W ALL++C++H N ++A
Sbjct: 487 QVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIA 546
Query: 464 KLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISK 512
+ AA LF L YV ++N AAA WD + +R +MK+R I K
Sbjct: 547 EQAAESLFNLEPQ-MAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKK 594
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 115/494 (23%), Positives = 193/494 (39%), Gaps = 105/494 (21%)
Query: 97 TLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGD 156
+++A+N I + + ESL L R + G + + FTF + KA A L D
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKA--------CARLAD 67
Query: 157 LG--RIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLI 214
+G +VH ++K+ D + TA D +VK + YA VF+ M E++ + +++
Sbjct: 68 VGCCEMVHAHLIKSPF--WSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125
Query: 215 SGYMNQG-------LFKDAE-----------------CIFQKT---------------VD 235
SG+ G LF++ F+K+ VD
Sbjct: 126 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVD 185
Query: 236 KDIVVFNAMIEGYSKTSEC--------------------------------ATRSLEVYI 263
+ V N I Y K + A + +Y
Sbjct: 186 VQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYC 245
Query: 264 DMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCG 323
M R F+P++STF ++ +C G+ + S + I+ + I MYSK
Sbjct: 246 LMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSE 305
Query: 324 RVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSAL 383
+R +FD M + SWT MI GY + G DEAL LF M I+ G P+ VT LS +
Sbjct: 306 DTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAM-IKSGEKPDLVTLLSLI 364
Query: 384 SACAHAGLVDKGLEIFQSMENEYKVKPRMEHYAC----------VVDLLGRAGRLNQAWE 433
S C F S+E + R + Y C ++D+ + G +++A +
Sbjct: 365 SGCGK----------FGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARD 414
Query: 434 FVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAE 493
PE+ W +++ L+G A S++ L+ ++A+ A +
Sbjct: 415 IFDNTPEK-TVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSG 473
Query: 494 KWDSVSELREVMKE 507
+ E +MK+
Sbjct: 474 SLEKGWEYFHIMKQ 487
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 171/391 (43%), Gaps = 86/391 (21%)
Query: 27 DFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYA 86
+F P + N N +T + G+ IHSH + G + + +Y K A
Sbjct: 251 EFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSA 310
Query: 87 RQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTST 146
R +FD + +T ++ MI Y ++G ++E+L L ++ SGEK D T +
Sbjct: 311 RLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSL------- 363
Query: 147 SGRNVAPLGDLGRIVHVQILKADVDV---EKDDVL-CTALTDSYVKNGRIAYARTVFDVM 202
++ G G + + + A D+ ++D+V+ C AL D Y K G I AR +FD
Sbjct: 364 ----ISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNT 419
Query: 203 SEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVY 262
EK V++ T++I+GY G+F +A +F K +D
Sbjct: 420 PEKTVVTWTTMIAGYALNGIFLEALKLFSKMID--------------------------- 452
Query: 263 IDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKC 322
L+++PN TF +++ AC+ + E G + +F +K
Sbjct: 453 -----LDYKPNHITFLAVLQACAHSGSLEKGWE---------YFHIMK------------ 486
Query: 323 GRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSA 382
+V + DH ++ M+D G+ G +EALEL + M + P+ + +
Sbjct: 487 -QVYNISPGLDH--------YSCMVDLLGRKGKLEEALELIRNMSAK----PDAGIWGAL 533
Query: 383 LSACAHAGLVDKGLEIF-QSMENEYKVKPRM 412
L+AC + + ++I Q+ E+ + ++P+M
Sbjct: 534 LNACK----IHRNVKIAEQAAESLFNLEPQM 560
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 251 bits (641), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 167/505 (33%), Positives = 269/505 (53%), Gaps = 38/505 (7%)
Query: 44 NSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLY----LKCNCLRYARQVFDDLRDKTLS 99
N T IH+ +K+G + +T + ++L L L YA ++F+ + +
Sbjct: 32 NCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCF 91
Query: 100 AYNYMIGAYLKQGQVEESLGLVRRLL----VSGEKLDG--FTFSMILKASTSTSGRNVAP 153
++N +I + + +E L+ L +S E ++ FTF +LKA T
Sbjct: 92 SWNTIIRGF---SESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQE-- 146
Query: 154 LGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVF-DVMSEKNVISSTS 212
G+ +H LK D+ + + L YV G + AR +F + EK+++ T
Sbjct: 147 ----GKQIHGLALKYGFG--GDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTD 200
Query: 213 -------------LISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSL 259
+I GYM G K A +F K + +V +N MI GYS ++
Sbjct: 201 RRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNG-FFKDAV 259
Query: 260 EVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMY 319
EV+ +M++ + RPN T S++ A S + + E+G+ + + LGSALIDMY
Sbjct: 260 EVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMY 319
Query: 320 SKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTF 379
SKCG + + VF+ + ++NV +W++MI+G+ +G +A++ F KM+ + GV P+ V +
Sbjct: 320 SKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMR-QAGVRPSDVAY 378
Query: 380 LSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMP 439
++ L+AC+H GLV++G F M + ++PR+EHY C+VDLLGR+G L++A EF++ MP
Sbjct: 379 INLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMP 438
Query: 440 ERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVS 499
+P+ +W ALL +CR+ GN EM K A+ L + + GAYVALSN A+ W VS
Sbjct: 439 IKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHD-SGAYVALSNMYASQGNWSEVS 497
Query: 500 ELREVMKERGISKDTACSWVGADSV 524
E+R MKE+ I KD CS + D V
Sbjct: 498 EMRLRMKEKDIRKDPGCSLIDIDGV 522
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 149/474 (31%), Positives = 244/474 (51%), Gaps = 42/474 (8%)
Query: 46 DTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMI 105
D + G+ +H + LK+G V + + L LY KC L + ++F + K + + MI
Sbjct: 464 DCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMI 523
Query: 106 GAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQI 165
+ + G + E++GL +L G D T + +L +S P G+ +H
Sbjct: 524 SGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSH------PSLPRGKEIHGYT 577
Query: 166 LKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKD 225
L+A +D D L +AL + Y K G + AR V+D + E + +S +SLISGY GL +D
Sbjct: 578 LRAGIDKGMD--LGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQD 635
Query: 226 AECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACS 285
+F+ DM F + +SI+ A +
Sbjct: 636 GFLLFR--------------------------------DMVMSGFTMDSFAISSILKAAA 663
Query: 286 MVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTS 345
+ +G QV + + K +GS+L+ MYSK G + D + F ++ ++ +WT+
Sbjct: 664 LSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTA 723
Query: 346 MIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENE 405
+I Y ++G +EAL+++ M+ E G P+ VTF+ LSAC+H GLV++ SM +
Sbjct: 724 LIASYAQHGKANEALQVYNLMK-EKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKD 782
Query: 406 YKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKL 465
Y ++P HY C+VD LGR+GRL +A F+ M +P++ VW LL++C++HG E+ K+
Sbjct: 783 YGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKV 842
Query: 466 AASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
AA + +L + GAY++LSN LA +WD V E R++MK G+ K+ S V
Sbjct: 843 AAKKAIELEPS-DAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 120/250 (48%), Gaps = 11/250 (4%)
Query: 206 NVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDM 265
+V + SL+S Y N G DA +F D+V N MI GY K SL + M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGY-KQHRLFEESLRFFSKM 141
Query: 266 QRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRV 325
L F N ++ S+I ACS + A + V +K +F + + SALID++SK R
Sbjct: 142 HFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRF 201
Query: 326 VDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSA 385
D+ +VF NV+ W ++I G +N +LF +M + + P+ T+ S L+A
Sbjct: 202 EDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQ-KPDSYTYSSVLAA 260
Query: 386 CAHAGLVDKGLEIFQSMENEYKVKPRMEH-YAC--VVDLLGRAGRLNQAWEFVMRMPERP 442
CA + G ++ Q+ +K E + C +VDL + G + +A E R+P P
Sbjct: 261 CASLEKLRFG-KVVQAR----VIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIP-NP 314
Query: 443 NSDVWAALLS 452
+ W +LS
Sbjct: 315 SVVSWTVMLS 324
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/416 (22%), Positives = 177/416 (42%), Gaps = 56/416 (13%)
Query: 48 PSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGA 107
P + + H +K G+ + L+ ++ K A +VF D + +N +I
Sbjct: 166 PLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAG 225
Query: 108 YLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILK 167
L+ L + V +K D +T+S +L A S G++V +++K
Sbjct: 226 ALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLR------FGKVVQARVIK 279
Query: 168 ADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAE 227
+ D +CTA+ D Y K G +A A V
Sbjct: 280 CGAE---DVFVCTAIVDLYAKCGHMAEAMEV----------------------------- 307
Query: 228 CIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMV 287
F + + +V + M+ GY+K+++ A +LE++ +M+ N T S+I AC
Sbjct: 308 --FSRIPNPSVVSWTVMLSGYTKSND-AFSALEIFKEMRHSGVEINNCTVTSVISACGRP 364
Query: 288 AAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVF---DHMHQKNVFSWT 344
+ QV + + K+ F+ + +ALI MYSK G + S +VF D + ++N+ +
Sbjct: 365 SMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN-- 422
Query: 345 SMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSA--CAHAGLVDKGLEIFQSM 402
MI + ++ P +A+ LF +M ++ G+ + + S LS C + G G + +
Sbjct: 423 VMITSFSQSKKPGKAIRLFTRM-LQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGL 481
Query: 403 ENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHG 458
+ V + L + G L ++++ +P + N+ WA+++S +G
Sbjct: 482 VLDLTVGSSL------FTLYSKCGSLEESYKLFQGIPFKDNA-CWASMISGFNEYG 530
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/414 (21%), Positives = 181/414 (43%), Gaps = 51/414 (12%)
Query: 30 PHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQV 89
P S S+ L + + G+ + + ++K G + + ++ LY KC + A +V
Sbjct: 249 PDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEV 307
Query: 90 FDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGR 149
F + + ++ ++ M+ Y K +L + + + SG +++ T + ++ A S
Sbjct: 308 FSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMV 367
Query: 150 NVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVF---DVMSEKN 206
A VH + K+ + D + AL Y K+G I + VF D + +N
Sbjct: 368 CEASQ------VHAWVFKSGFYL--DSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQN 419
Query: 207 VISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQ 266
++ N MI +S++ + +++ ++ M
Sbjct: 420 IV---------------------------------NVMITSFSQSKK-PGKAIRLFTRML 445
Query: 267 RLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVV 326
+ R + + S++ S++ +G+QV +K+ + +GS+L +YSKCG +
Sbjct: 446 QEGLRTDEFSVCSLL---SVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLE 502
Query: 327 DSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSAC 386
+S ++F + K+ W SMI G+ + G+ EA+ LF +M ++ G P+ T + L+ C
Sbjct: 503 ESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEM-LDDGTSPDESTLAAVLTVC 561
Query: 387 AHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPE 440
+ + +G EI + M+ + +V++ + G L A + R+PE
Sbjct: 562 SSHPSLPRGKEI-HGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPE 614
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 156/342 (45%), Gaps = 43/342 (12%)
Query: 52 QTIHSHILKTGFVP-NTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
+ + +H+L+ +P + ++ LL Y + A ++FD + + + N MI Y +
Sbjct: 68 KILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQ 127
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
EESL ++ G + + ++ ++ A ++ APL +V +K
Sbjct: 128 HRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQ----APL--FSELVCCHTIKMGY 181
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
+V+ +AL D + KN R A VF NV ++I+G + ++ +F
Sbjct: 182 FFY--EVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRN---QNYGAVF 236
Query: 231 QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAF 290
+F+ M G+ K P+ T++S++ AC+ +
Sbjct: 237 D--------LFHEMCVGFQK---------------------PDSYTYSSVLAACASLEKL 267
Query: 291 EVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGY 350
G+ VQ++++K + + +A++D+Y+KCG + ++ VF + +V SWT M+ GY
Sbjct: 268 RFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGY 326
Query: 351 GKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLV 392
K+ ALE+F++M+ GV N T S +SAC +V
Sbjct: 327 TKSNDAFSALEIFKEMR-HSGVEINNCTVTSVISACGRPSMV 367
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 151/366 (41%), Gaps = 74/366 (20%)
Query: 30 PHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQV 89
P + L+ L + + G+ IH + L+ G ++ L+ +Y KC L+ ARQV
Sbjct: 549 PDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQV 608
Query: 90 FDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGR 149
+D L + + + +I Y + G +++ L R +++SG +D F S ILKA+
Sbjct: 609 YDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAA----- 663
Query: 150 NVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVIS 209
++ LG VH I K LCT E +V
Sbjct: 664 -LSDESSLGAQVHAYITKIG--------LCT-----------------------EPSV-- 689
Query: 210 STSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLN 269
+SL++ Y G D F + D++ + A+I Y++ + A +L+VY M+
Sbjct: 690 GSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGK-ANEALQVYNLMKEKG 748
Query: 270 FRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSR 329
F+P+ TF ++ ACS L++ +F H+ M G ++R
Sbjct: 749 FKPDKVTFVGVLSACS-----------HGGLVEESYF-HLN------SMVKDYGIEPENR 790
Query: 330 RVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHA 389
+ M+D G++G EA M I+ P+ + + + L+AC
Sbjct: 791 H------------YVCMVDALGRSGRLREAESFINNMHIK----PDALVWGTLLAACKIH 834
Query: 390 GLVDKG 395
G V+ G
Sbjct: 835 GEVELG 840
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 155/497 (31%), Positives = 249/497 (50%), Gaps = 42/497 (8%)
Query: 23 LQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNC 82
+Q + VP+ + L+ I G+ IHS I+KT F N + L+ +Y K
Sbjct: 481 MQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGK 540
Query: 83 LRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKA 142
L A + K + ++ MI Y + +++L R++L G + D + + A
Sbjct: 541 LDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSA 600
Query: 143 STSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVM 202
C L +K G+ +A+
Sbjct: 601 ------------------------------------CAGL--QALKEGQQIHAQACVSGF 622
Query: 203 SEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVY 262
S ++ +L++ Y G +++ F++T D + +NA++ G+ ++ +L V+
Sbjct: 623 S-SDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGN-NEEALRVF 680
Query: 263 IDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKC 322
+ M R N TF S + A S A + G+QV + + KT + ++ +ALI MY+KC
Sbjct: 681 VRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKC 740
Query: 323 GRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSA 382
G + D+ + F + KN SW ++I+ Y K+GF EAL+ F +M I V PN VT +
Sbjct: 741 GSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQM-IHSNVRPNHVTLVGV 799
Query: 383 LSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERP 442
LSAC+H GLVDKG+ F+SM +EY + P+ EHY CVVD+L RAG L++A EF+ MP +P
Sbjct: 800 LSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKP 859
Query: 443 NSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELR 502
++ VW LLS+C +H N E+ + AA L +L YV LSN A ++KWD+ R
Sbjct: 860 DALVWRTLLSACVVHKNMEIGEFAAHHLLELEPED-SATYVLLSNLYAVSKKWDARDLTR 918
Query: 503 EVMKERGISKDTACSWV 519
+ MKE+G+ K+ SW+
Sbjct: 919 QKMKEKGVKKEPGQSWI 935
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 184/377 (48%), Gaps = 41/377 (10%)
Query: 23 LQNHDFVPHSTLLSNTLQYYINSD-TPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCN 81
++N P+ L L+ + ++ + G+ +HS ILK G N +S KL YL
Sbjct: 75 VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKG 134
Query: 82 CLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILK 141
L A +VFD++ ++T+ +N MI + + E GL R++ + TFS +L+
Sbjct: 135 DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE 194
Query: 142 ASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDV 201
A G +VA D+ +H +IL + V+C L D Y +NG + AR VFD
Sbjct: 195 A---CRGGSVA--FDVVEQIHARILYQ--GLRDSTVVCNPLIDLYSRNGFVDLARRVFDG 247
Query: 202 MSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEV 261
+ K+ S + AMI G SK +EC ++ +
Sbjct: 248 LRLKDHSS-------------------------------WVAMISGLSK-NECEAEAIRL 275
Query: 262 YIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSK 321
+ DM L P F+S++ AC + + E+G+Q+ ++K F + +AL+ +Y
Sbjct: 276 FCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFH 335
Query: 322 CGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLS 381
G ++ + +F +M Q++ ++ ++I+G + G+ ++A+ELF++M ++ G+ P+ T S
Sbjct: 336 LGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLD-GLEPDSNTLAS 394
Query: 382 ALSACAHAGLVDKGLEI 398
+ AC+ G + +G ++
Sbjct: 395 LVVACSADGTLFRGQQL 411
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 110/464 (23%), Positives = 210/464 (45%), Gaps = 50/464 (10%)
Query: 30 PHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQV 89
P S L++ + T GQ +H++ K GF N I LL LY KC + A
Sbjct: 387 PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDY 446
Query: 90 FDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGR 149
F + + + +N M+ AY + S + R++ + + +T+ ILK
Sbjct: 447 FLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIR---- 502
Query: 150 NVAPLGD--LGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNV 207
LGD LG +H QI+K + + + +C+ L D Y K G++ A + + K+V
Sbjct: 503 ----LGDLELGEQIHSQIIKTNFQL--NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDV 556
Query: 208 ISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQR 267
+S T++I+GY A F++ +D+ I RS EV
Sbjct: 557 VSWTTMIAGYTQYNFDDKALTTFRQMLDRGI------------------RSDEV------ 592
Query: 268 LNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVD 327
+ + AC+ + A + GQQ+ +Q + F + +AL+ +YS+CG++ +
Sbjct: 593 --------GLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEE 644
Query: 328 SRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACA 387
S F+ + +W +++ G+ ++G +EAL +F +M E G+ N TF SA+ A +
Sbjct: 645 SYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNRE-GIDNNNFTFGSAVKAAS 703
Query: 388 HAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVW 447
+ +G ++ ++ + E ++ + + G ++ A + + + + N W
Sbjct: 704 ETANMKQGKQV-HAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK-NEVSW 761
Query: 448 AALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAA 491
A++++ HG A + ++ +++N RP +V L L+A
Sbjct: 762 NAIINAYSKHGFGSEALDSFDQM--IHSNVRPN-HVTLVGVLSA 802
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 175/388 (45%), Gaps = 46/388 (11%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQ 111
+ IH+ IL G +T + L+ LY + + AR+VFD LR K S++ MI K
Sbjct: 207 EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKN 266
Query: 112 GQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVD 171
E++ L + V G + FS +L A + + L ++G +H +LK
Sbjct: 267 ECEAEAIRLFCDMYVLGIMPTPYAFSSVLSAC-----KKIESL-EIGEQLHGLVLKLGFS 320
Query: 172 VEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQ 231
+D+YV N +L+S Y + G AE IF
Sbjct: 321 -----------SDTYVCN----------------------ALVSLYFHLGNLISAEHIFS 347
Query: 232 KTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFE 291
+D V +N +I G S+ +++E++ M P+ +T AS++ ACS
Sbjct: 348 NMSQRDAVTYNTLINGLSQCGY-GEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLF 406
Query: 292 VGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYG 351
GQQ+ + K F + K+ AL+++Y+KC + + F +NV W M+ YG
Sbjct: 407 RGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYG 466
Query: 352 KNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPR 411
+ +F++MQIE +VPN T+ S L C G ++ G +I + K +
Sbjct: 467 LLDDLRNSFRIFRQMQIE-EIVPNQYTYPSILKTCIRLGDLELGEQIHSQI---IKTNFQ 522
Query: 412 MEHYAC--VVDLLGRAGRLNQAWEFVMR 437
+ Y C ++D+ + G+L+ AW+ ++R
Sbjct: 523 LNAYVCSVLIDMYAKLGKLDTAWDILIR 550
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 187/414 (45%), Gaps = 45/414 (10%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ +H +LK GF +T + L+ LY L A +F ++ + YN +I +
Sbjct: 307 GEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQ 366
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
G E+++ L +R+ + G + D T + ++ A ++ G L R + +
Sbjct: 367 CGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSAD--------GTLFRGQQLHAYTTKL 418
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
++ + AL + Y K I T D E V
Sbjct: 419 GFASNNKIEGALLNLYAKCADI---ETALDYFLETEV----------------------- 452
Query: 231 QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAF 290
+++V++N M+ Y + S ++ MQ PN T+ SI+ C +
Sbjct: 453 -----ENVVLWNVMLVAYGLLDDLRN-SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL 506
Query: 291 EVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGY 350
E+G+Q+ SQ++KT F + + S LIDMY+K G++ + + K+V SWT+MI GY
Sbjct: 507 ELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGY 566
Query: 351 GKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIF-QSMENEYKVK 409
+ F D+AL F++M ++ G+ + V +A+SACA + +G +I Q+ + +
Sbjct: 567 TQYNFDDKALTTFRQM-LDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSD 625
Query: 410 PRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMA 463
++ +V L R G++ +++ E ++ W AL+S + GN E A
Sbjct: 626 LPFQN--ALVTLYSRCGKIEESY-LAFEQTEAGDNIAWNALVSGFQQSGNNEEA 676
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 126/290 (43%), Gaps = 43/290 (14%)
Query: 156 DLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLIS 215
D GR +H QILK +D + L L D Y+ G + A VFD M E+ + + +I
Sbjct: 102 DEGRKLHSQILKLGLD--SNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIK 159
Query: 216 GYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNIS 275
++ L + +F + V +++ PN
Sbjct: 160 ELASRNLIGEVFGLFVRMVSENVT--------------------------------PNEG 187
Query: 276 TFASIIGAC-SMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDH 334
TF+ ++ AC AF+V +Q+ ++++ + + LID+YS+ G V +RRVFD
Sbjct: 188 TFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDG 247
Query: 335 MHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDK 394
+ K+ SW +MI G KN EA+ LF M + G++P F S LSAC +
Sbjct: 248 LRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYV-LGIMPTPYAFSSVLSACKKI----E 302
Query: 395 GLEIFQSMEN-EYKVKPRMEHYAC--VVDLLGRAGRLNQAWEFVMRMPER 441
LEI + + K+ + Y C +V L G L A M +R
Sbjct: 303 SLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR 352
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 109/255 (42%), Gaps = 23/255 (9%)
Query: 271 RPNISTFASIIGACSMV-AAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSR 329
RPN T ++ C + + G+++ SQ++K + L L D Y G + +
Sbjct: 81 RPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAF 140
Query: 330 RVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHA 389
+VFD M ++ +F+W MI E LF +M + V PN TF L AC
Sbjct: 141 KVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRM-VSENVTPNEGTFSGVLEACRGG 199
Query: 390 GLVDKGLE------IFQSMENEYKV-KPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERP 442
+ +E ++Q + + V P ++DL R G ++ A + +
Sbjct: 200 SVAFDVVEQIHARILYQGLRDSTVVCNP-------LIDLYSRNGFVDLARRVFDGLRLKD 252
Query: 443 NSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSV---S 499
+S W A++S + A +++ L P A+ S+ L+A +K +S+
Sbjct: 253 HSS-WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAF---SSVLSACKKIESLEIGE 308
Query: 500 ELREVMKERGISKDT 514
+L ++ + G S DT
Sbjct: 309 QLHGLVLKLGFSSDT 323
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 162/578 (28%), Positives = 294/578 (50%), Gaps = 84/578 (14%)
Query: 10 FSSRALFSPHQPFLQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNI 69
F SR +F+ + + FV S ++L+ G+ IH+ ++K GFV + +
Sbjct: 117 FYSRMVFAGVKADTFTYPFVIKSVAGISSLE---------EGKKIHAMVIKLGFVSDVYV 167
Query: 70 SIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGE 129
L+ LY+K C A +VF+++ ++ + ++N MI YL G SL L + +L G
Sbjct: 168 CNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGF 227
Query: 130 KLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVD------------------ 171
K D F+ L A + +P +G+ +H +++ ++
Sbjct: 228 KPDRFSTMSALGACSHV----YSP--KMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYG 281
Query: 172 ------------VEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKN-----VISS---- 210
++++ V + Y +NGR+ A F MSE+N VI+S
Sbjct: 282 EVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLL 341
Query: 211 ---------------------------TSLISGYMNQGLFKDAECIFQKTVDKDIVVFNA 243
T+LI Y G K AE IF + +K+++ +N+
Sbjct: 342 PASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNS 401
Query: 244 MIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKT 303
+I Y + + + +LE++ ++ + P+ +T ASI+ A + + G+++ + ++K+
Sbjct: 402 IIAAYVQNGKNYS-ALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKS 460
Query: 304 PFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELF 363
++ + + ++L+ MY+ CG + D+R+ F+H+ K+V SW S+I Y +GF ++ LF
Sbjct: 461 RYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLF 520
Query: 364 QKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLG 423
+M I V PN TF S L+AC+ +G+VD+G E F+SM+ EY + P +EHY C++DL+G
Sbjct: 521 SEM-IASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIG 579
Query: 424 RAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYV 483
R G + A F+ MP P + +W +LL++ R H + +A+ AA ++FK+ + G YV
Sbjct: 580 RTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDN-TGCYV 638
Query: 484 ALSNTLAAAEKWDSVSELREVMKERGISKDTACSWVGA 521
L N A A +W+ V+ ++ +M+ +GIS+ ++ S V A
Sbjct: 639 LLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEA 676
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 209/428 (48%), Gaps = 66/428 (15%)
Query: 86 ARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTS 145
A Q+FD++ +N MI + G E++ R++ +G K D FT+ ++K+
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS--- 139
Query: 146 TSGRNVAPLGDL--GRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMS 203
VA + L G+ +H ++K + D +C +L Y+K G A VF+ M
Sbjct: 140 -----VAGISSLEEGKKIHAMVIK--LGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMP 192
Query: 204 EKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYI 263
E++++S S+ISGY+ G +G+S SL ++
Sbjct: 193 ERDIVSWNSMISGYLALG------------------------DGFS--------SLMLFK 220
Query: 264 DMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPF-FGHIKLGSALIDMYSKC 322
+M + F+P+ + S +GACS V + ++G+++ +++ G + + ++++DMYSK
Sbjct: 221 EMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKY 280
Query: 323 GRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSA 382
G V + R+F+ M Q+N+ +W MI Y +NG +A FQKM + G+ P+ +T ++
Sbjct: 281 GEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINL 340
Query: 383 LSACAHAGLVDKGLEIFQSMENEYKVK----PRMEHYACVVDLLGRAGRLNQAWEFVMRM 438
L A A + +G I + Y ++ P M ++D+ G G+L A RM
Sbjct: 341 LPASA----ILEGRTI-----HGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRM 391
Query: 439 PERPNSDVWAALLSSCRLHGNTEMAKLAASELFK--LNANGRPGAYVALSNTLAAAEKWD 496
E+ N W +++++ +G +A ELF+ +++ P + +++ L A +
Sbjct: 392 AEK-NVISWNSIIAAYVQNGKN----YSALELFQELWDSSLVPDS-TTIASILPAYAESL 445
Query: 497 SVSELREV 504
S+SE RE+
Sbjct: 446 SLSEGREI 453
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 138/285 (48%), Gaps = 13/285 (4%)
Query: 196 RTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECA 255
R + V + N + T + G+ + L +DA +F + D ++N MI+G++
Sbjct: 53 RDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCG-LY 111
Query: 256 TRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSAL 315
+++ Y M + + T+ +I + + +++ E G+++ + ++K F + + ++L
Sbjct: 112 IEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSL 171
Query: 316 IDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPN 375
I +Y K G D+ +VF+ M ++++ SW SMI GY G +L LF++M ++ G P+
Sbjct: 172 ISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEM-LKCGFKPD 230
Query: 376 FVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEH-----YACVVDLLGRAGRLNQ 430
+ +SAL AC+H G EI + + V+ R+E ++D+ + G ++
Sbjct: 231 RFSTMSALGACSHVYSPKMGKEI-----HCHAVRSRIETGDVMVMTSILDMYSKYGEVSY 285
Query: 431 AWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNA 475
A M +R N W ++ +G A L ++ + N
Sbjct: 286 AERIFNGMIQR-NIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNG 329
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 3/148 (2%)
Query: 3 NGILRPFFSSRALFSPHQPF--LQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILK 60
N I+ + + +S + F L + VP ST +++ L Y S + S G+ IH++I+K
Sbjct: 400 NSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVK 459
Query: 61 TGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGL 120
+ + NT I L+ +Y C L AR+ F+ + K + ++N +I AY G S+ L
Sbjct: 460 SRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWL 519
Query: 121 VRRLLVSGEKLDGFTFSMILKASTSTSG 148
++ S + TF+ +L A+ S SG
Sbjct: 520 FSEMIASRVNPNKSTFASLL-AACSISG 546
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 148/469 (31%), Positives = 245/469 (52%), Gaps = 43/469 (9%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQ 111
+ +H + LK FV N ++ + Y KC L YA++VF +R KT++++N +IG + +
Sbjct: 415 KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQS 474
Query: 112 GQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVD 171
SL ++ +SG D FT +L A + LG+ VH I++ +
Sbjct: 475 NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLR------LGKEVHGFIIRNWL- 527
Query: 172 VEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQ 231
E+D + ++ Y+ G + + +FD M
Sbjct: 528 -ERDLFVYLSVLSLYIHCGELCTVQALFDAME---------------------------- 558
Query: 232 KTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFE 291
DK +V +N +I GY + R+L V+ M + + + GACS++ +
Sbjct: 559 ---DKSLVSWNTVITGYLQNG-FPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLR 614
Query: 292 VGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYG 351
+G++ + +K + +LIDMY+K G + S +VF+ + +K+ SW +MI GYG
Sbjct: 615 LGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYG 674
Query: 352 KNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPR 411
+G EA++LF++MQ G P+ +TFL L+AC H+GL+ +GL M++ + +KP
Sbjct: 675 IHGLAKEAIKLFEEMQ-RTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPN 733
Query: 412 MEHYACVVDLLGRAGRLNQAWEFVM-RMPERPNSDVWAALLSSCRLHGNTEMAKLAASEL 470
++HYACV+D+LGRAG+L++A V M E + +W +LLSSCR+H N EM + A++L
Sbjct: 734 LKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKL 793
Query: 471 FKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
F+L +P YV LSN A KW+ V ++R+ M E + KD CSW+
Sbjct: 794 FELEPE-KPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWI 841
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 156/341 (45%), Gaps = 39/341 (11%)
Query: 51 GQTIHSHILKTGFVPNTNI-SIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYL 109
G+ IH + + + N ++ +++ +Y C +R VFD LR K L +N +I +Y
Sbjct: 103 GRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYS 162
Query: 110 KQGQVEESLGLVRRLLVSGEKL-DGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKA 168
+ +E L ++ + + L D FT+ ++KA A + D+G + V L
Sbjct: 163 RNELYDEVLETFIEMISTTDLLPDHFTYPCVIKA--------CAGMSDVGIGLAVHGLVV 214
Query: 169 DVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAEC 228
+ +D + AL Y +G + A +FD+M E+N++S S+I + + G +++
Sbjct: 215 KTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEES-- 272
Query: 229 IFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVA 288
++ M+E + F P+++T +++ C+
Sbjct: 273 ---------FLLLGEMMEENGDGA-----------------FMPDVATLVTVLPVCARER 306
Query: 289 AFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMID 348
+G+ V +K + L +AL+DMYSKCG + +++ +F + KNV SW +M+
Sbjct: 307 EIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVG 366
Query: 349 GYGKNGFPDEALELFQKMQI-EYGVVPNFVTFLSALSACAH 388
G+ G ++ ++M V + VT L+A+ C H
Sbjct: 367 GFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 407
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 141/313 (45%), Gaps = 47/313 (15%)
Query: 156 DLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLIS 215
++GR +H Q++ + DDVLCT + Y G +R VFD + KN
Sbjct: 101 EMGRKIH-QLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKN--------- 150
Query: 216 GYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDM-QRLNFRPNI 274
+FQ +NA+I YS+ +E LE +I+M + P+
Sbjct: 151 -------------LFQ---------WNAVISSYSR-NELYDEVLETFIEMISTTDLLPDH 187
Query: 275 STFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDH 334
T+ +I AC+ ++ +G V ++KT + +G+AL+ Y G V D+ ++FD
Sbjct: 188 FTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDI 247
Query: 335 MHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYG---VVPNFVTFLSALSACAHAGL 391
M ++N+ SW SMI + NGF +E+ L +M E G +P+ T ++ L CA
Sbjct: 248 MPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARERE 307
Query: 392 VDKGLEIFQSMENEYKVKPRMEHYA----CVVDLLGRAGRLNQAWEFVMRMPERPNSDVW 447
+ G + + + VK R++ ++D+ + G + A + + +M N W
Sbjct: 308 IGLGKGV-----HGWAVKLRLDKELVLNNALMDMYSKCGCITNA-QMIFKMNNNKNVVSW 361
Query: 448 AALLSSCRLHGNT 460
++ G+T
Sbjct: 362 NTMVGGFSAEGDT 374
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 138/301 (45%), Gaps = 45/301 (14%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ +H I++ + + + +L LY+ C L + +FD + DK+L ++N +I YL+
Sbjct: 515 GKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQ 574
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
G + +LG+ R++++ G +L G + + A + + P LGR H LK
Sbjct: 575 NGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS------LLPSLRLGREAHAYALKH-- 626
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
+E D + +L D Y KNG I + VF+ + EK+ S ++I GY GL K+A +F
Sbjct: 627 LLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLF 686
Query: 231 QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAF 290
+ +MQR P+ TF ++ AC+
Sbjct: 687 E--------------------------------EMQRTGHNPDDLTFLGVLTACNHSGLI 714
Query: 291 EVGQQVQSQLMKTPFF--GHIKLGSALIDMYSKCGRVVDSRRVF--DHMHQKNVFSWTSM 346
G + Q MK+ F ++K + +IDM + G++ + RV + + +V W S+
Sbjct: 715 HEGLRYLDQ-MKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSL 773
Query: 347 I 347
+
Sbjct: 774 L 774
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 2/167 (1%)
Query: 311 LGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEY 370
L + +I MY+ CG DSR VFD + KN+F W ++I Y +N DE LE F +M
Sbjct: 122 LCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTT 181
Query: 371 GVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQ 430
++P+ T+ + ACA V GL + + V+ A +V G G +
Sbjct: 182 DLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNA-LVSFYGTHGFVTD 240
Query: 431 AWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANG 477
A + MPER N W +++ +G +E + L E+ + N +G
Sbjct: 241 ALQLFDIMPER-NLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDG 286
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 157/508 (30%), Positives = 261/508 (51%), Gaps = 25/508 (4%)
Query: 27 DFVPHSTLLSNTLQYYINS-DTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRY 85
DF +L L+ I TP ++ + ++KT + + + + L
Sbjct: 764 DFSASLSLAPPNLKKIIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDL 823
Query: 86 ARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTS 145
A +++ + YN + ++ SL L R+L +T+S ++KAS+
Sbjct: 824 AVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSF 883
Query: 146 TS--GRNV-APLGDLGRIVHVQILKADVDV------------------EKDDVLCTALTD 184
S G ++ A + G HV+I +D E+DD+ T +
Sbjct: 884 ASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVS 943
Query: 185 SYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAM 244
+Y + + A ++ + MSEKN +S LI+GYM G + AE +F + KDI+ + M
Sbjct: 944 AYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTM 1003
Query: 245 IEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTP 304
I+GYS+ ++ V+ M P+ T +++I AC+ + E+G++V ++
Sbjct: 1004 IKGYSQNKR-YREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNG 1062
Query: 305 FFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQ 364
F + +GSAL+DMYSKCG + + VF ++ +KN+F W S+I+G +GF EAL++F
Sbjct: 1063 FVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFA 1122
Query: 365 KMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGR 424
KM++E V PN VTF+S +AC HAGLVD+G I++SM ++Y + +EHY +V L +
Sbjct: 1123 KMEME-SVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSK 1181
Query: 425 AGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVA 484
AG + +A E + M PN+ +W ALL CR+H N +A++A ++L L G Y
Sbjct: 1182 AGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNS-GYYFL 1240
Query: 485 LSNTLAAAEKWDSVSELREVMKERGISK 512
L + A +W V+E+R M+E GI K
Sbjct: 1241 LVSMYAEQNRWRDVAEIRGRMRELGIEK 1268
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 249 bits (635), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 148/479 (30%), Positives = 266/479 (55%), Gaps = 18/479 (3%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ +H + +K G ++ +S L+ +Y + +VFD++ + + ++N +I +Y+
Sbjct: 65 GEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVG 124
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
G+ E+++G+ +R+ S E F I+ ++ S +G+ RI + + ++
Sbjct: 125 NGRFEDAIGVFKRM--SQESNLKFDEGTIVSTLSACSALKNLEIGE--RIYRFVVTEFEM 180
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
V + AL D + K G + AR VFD M +KNV TS++ GY++ G +A +F
Sbjct: 181 SVR----IGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLF 236
Query: 231 QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAF 290
+++ KD+V++ AM+ GY + + +LE++ MQ RP+ S++ C+ A
Sbjct: 237 ERSPVKDVVLWTAMMNGYVQFNR-FDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGAL 295
Query: 291 EVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGY 350
E G+ + + + +G+AL+DMY+KCG + + VF + +++ SWTS+I G
Sbjct: 296 EQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGL 355
Query: 351 GKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKP 410
NG AL+L+ +M+ GV + +TF++ L+AC H G V +G +IF SM + V+P
Sbjct: 356 AMNGMSGRALDLYYEME-NVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQP 414
Query: 411 RMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSD-----VWAALLSSCRLHGNTEMAKL 465
+ EH +C++DLL RAG L++A E + +M R SD V+ +LLS+ R +GN ++A+
Sbjct: 415 KSEHCSCLIDLLCRAGLLDEAEELIDKM--RGESDETLVPVYCSLLSAARNYGNVKIAER 472
Query: 466 AASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWVGADSV 524
A +L K+ + A+ L++ A+A +W+ V+ +R MK+ GI K CS + D V
Sbjct: 473 VAEKLEKVEVSD-SSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGV 530
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 172/397 (43%), Gaps = 74/397 (18%)
Query: 93 LRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVA 152
L+ +L YN M+ + + L L L G D FT ++LK+ R V
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRL--RKVI 63
Query: 153 PLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTS 212
G VH +KA +E D + +L Y G+I VFD M +++V+S
Sbjct: 64 E----GEKVHGYAVKA--GLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNG 117
Query: 213 LISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRP 272
LIS Y+ G F+DA +F++ Q N +
Sbjct: 118 LISSYVGNGRFEDAIGVFKRM-------------------------------SQESNLKF 146
Query: 273 NISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVF 332
+ T S + ACS + E+G+++ + + T F +++G+AL+DM+ KCG + +R VF
Sbjct: 147 DEGTIVSTLSACSALKNLEIGERIY-RFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVF 205
Query: 333 DHMHQKNVFSWTSMIDGY---GK-----------------------NGFP-----DEALE 361
D M KNV WTSM+ GY G+ NG+ DEALE
Sbjct: 206 DSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALE 265
Query: 362 LFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDL 421
LF+ MQ G+ P+ +S L+ CA G +++G I + NE +V +VD+
Sbjct: 266 LFRCMQTA-GIRPDNFVLVSLLTGCAQTGALEQGKWIHGYI-NENRVTVDKVVGTALVDM 323
Query: 422 LGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHG 458
+ G + A E + ER + W +L+ ++G
Sbjct: 324 YAKCGCIETALEVFYEIKERDTAS-WTSLIYGLAMNG 359
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 139/292 (47%), Gaps = 16/292 (5%)
Query: 238 IVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQ 297
++++N M++ + + T+ L ++ +++ P+ T ++ + + G++V
Sbjct: 11 LLMYNKMLKSLAD-GKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVH 69
Query: 298 SQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPD 357
+K + ++L+ MY+ G++ + +VFD M Q++V SW +I Y NG +
Sbjct: 70 GYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFE 129
Query: 358 EALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYAC 417
+A+ +F++M E + + T +S LSAC+ ++ G I++ + E+++ R+ +
Sbjct: 130 DAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGN--A 187
Query: 418 VVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANG 477
+VD+ + G L++A M ++ N W +++ G + A++ LF+ +
Sbjct: 188 LVDMFCKCGCLDKARAVFDSMRDK-NVKCWTSMVFGYVSTGRIDEARV----LFERSPVK 242
Query: 478 RPGAYVALSNTLAAAEKWDSVSELREVMKERGISKD--------TACSWVGA 521
+ A+ N ++D EL M+ GI D T C+ GA
Sbjct: 243 DVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGA 294
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 91/215 (42%), Gaps = 13/215 (6%)
Query: 23 LQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNC 82
+Q P + +L + L + G+ IH +I + + + L+ +Y KC C
Sbjct: 270 MQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGC 329
Query: 83 LRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKA 142
+ A +VF +++++ +++ +I G +L L + G +LD TF +L A
Sbjct: 330 IETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTA 389
Query: 143 STSTSGRNVAPLGDLGR-IVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDV 201
G VA GR I H + +V + + C+ L D + G + A + D
Sbjct: 390 --CNHGGFVAE----GRKIFHSMTERHNVQPKSEH--CSCLIDLLCRAGLLDEAEELIDK 441
Query: 202 M----SEKNVISSTSLISGYMNQGLFKDAECIFQK 232
M E V SL+S N G K AE + +K
Sbjct: 442 MRGESDETLVPVYCSLLSAARNYGNVKIAERVAEK 476
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 248 bits (634), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 154/525 (29%), Positives = 273/525 (52%), Gaps = 14/525 (2%)
Query: 3 NGILRPFFSSRALFSPHQPF---LQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHIL 59
N ++ + S+ F Q F + D P S + + L +SG+ IHS+IL
Sbjct: 298 NVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYIL 357
Query: 60 KTGFV-PNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESL 118
+ ++ +T++ L+ Y + A F + K + ++N ++ A+ + + L
Sbjct: 358 RHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFL 417
Query: 119 GLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVL 178
L+ LL LD T +LK NV +G + + + + E++ L
Sbjct: 418 NLLHHLLNEAITLDSVTILSLLKFCI-----NVQGIGKVKEVHGYSVKAGLLHDEEEPKL 472
Query: 179 CTALTDSYVKNGRIAYARTVFDVMSEK-NVISSTSLISGYMNQGLFKDAECIFQKTVDKD 237
AL D+Y K G + YA +F +SE+ ++S SL+SGY+N G DA+ +F + D
Sbjct: 473 GNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTD 532
Query: 238 IVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQ 297
+ ++ M+ Y++ S C ++ V+ ++Q RPN T +++ C+ +A+ + +Q
Sbjct: 533 LTTWSLMVRIYAE-SCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCH 591
Query: 298 SQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPD 357
+++ G I+L L+D+Y+KCG + + VF ++++ +T+M+ GY +G
Sbjct: 592 GYIIRGGL-GDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGK 650
Query: 358 EALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYAC 417
EAL ++ M E + P+ V + L+AC HAGL+ GL+I+ S+ + +KP ME YAC
Sbjct: 651 EALMIYSHMT-ESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYAC 709
Query: 418 VVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANG 477
VDL+ R GRL+ A+ FV +MP PN+++W LL +C + ++ A+ L + ++
Sbjct: 710 AVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDD 769
Query: 478 RPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWVGAD 522
G +V +SN AA KW+ V ELR +MK++ + K CSW+ D
Sbjct: 770 -TGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVD 813
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 163/358 (45%), Gaps = 51/358 (14%)
Query: 49 SSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMI-GA 107
+SG+ +H + K G + + +S +L +Y KC + +++F + +N ++ G
Sbjct: 38 TSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGL 97
Query: 108 YLKQGQVEESLGLVRRLLVSGE-KLDGFTFSMILKASTSTSGRNVAPLGDL--GRIVHVQ 164
+ G+ E++ + + + E K TF+++L LGD G+ +H
Sbjct: 98 SVSCGR--ETMRFFKAMHFADEPKPSSVTFAIVLPLCVR--------LGDSYNGKSMHSY 147
Query: 165 ILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFK 224
I+KA + EKD ++ AL Y K G I F
Sbjct: 148 IIKAGL--EKDTLVGNALVSMYAKFGFI------------------------------FP 175
Query: 225 DAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGAC 284
DA F DKD+V +NA+I G+S+ + A + + M + PN +T A+++ C
Sbjct: 176 DAYTAFDGIADKDVVSWNAIIAGFSENNMMAD-AFRSFCLMLKEPTEPNYATIANVLPVC 234
Query: 285 SMV---AAFEVGQQVQSQLMKTPFF-GHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNV 340
+ + A G+Q+ S +++ + H+ + ++L+ Y + GR+ ++ +F M K++
Sbjct: 235 ASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDL 294
Query: 341 FSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEI 398
SW +I GY N +A +LF + + V P+ VT +S L CA + G EI
Sbjct: 295 VSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEI 352
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/450 (20%), Positives = 189/450 (42%), Gaps = 50/450 (11%)
Query: 30 PHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCN-CLRYARQ 88
P S + L + +G+++HS+I+K G +T + L+ +Y K A
Sbjct: 120 PSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYT 179
Query: 89 VFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSG 148
FD + DK + ++N +I + + + ++ +L + + T + +L S
Sbjct: 180 AFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMD- 238
Query: 149 RNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVI 208
+N+A GR +H +++ ++ +C +L Y++ GRI A ++F M K+++
Sbjct: 239 KNIACRS--GRQIHSYVVQRSW-LQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLV 295
Query: 209 SSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRL 268
S +I+GY + + A +F V K V
Sbjct: 296 SWNVVIAGYASNCEWFKAFQLFHNLVHKGDV----------------------------- 326
Query: 269 NFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPF-FGHIKLGSALIDMYSKCGRVVD 327
P+ T SI+ C+ + G+++ S +++ + +G+ALI Y++ G
Sbjct: 327 --SPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSA 384
Query: 328 SRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACA 387
+ F M K++ SW +++D + + + L L + E + + VT LS L C
Sbjct: 385 AYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNE-AITLDSVTILSLLKFCI 443
Query: 388 HAGLVDKGLEIFQSMENEYKVKPRMEHYA-------CVVDLLGRAGRLNQAWEFVMRMPE 440
+ + K E+ + Y VK + H ++D + G + A + + + E
Sbjct: 444 NVQGIGKVKEV-----HGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSE 498
Query: 441 RPNSDVWAALLSSCRLHGNTEMAKLAASEL 470
R + +LLS G+ + A++ +E+
Sbjct: 499 RRTLVSYNSLLSGYVNSGSHDDAQMLFTEM 528
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 107/240 (44%), Gaps = 14/240 (5%)
Query: 210 STSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLN 269
S S+++ Y D + +F++ D VV+N ++ G S + C ++ + M +
Sbjct: 59 SKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVS--CGRETMRFFKAMHFAD 116
Query: 270 F-RPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVV-D 327
+P+ TFA ++ C + G+ + S ++K +G+AL+ MY+K G + D
Sbjct: 117 EPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPD 176
Query: 328 SRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACA 387
+ FD + K+V SW ++I G+ +N +A F M E PN+ T + L CA
Sbjct: 177 AYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKE-PTEPNYATIANVLPVCA 235
Query: 388 HAGLVDKGLEIFQSMENEYKVKPR----MEHYAC--VVDLLGRAGRLNQAWEFVMRMPER 441
+DK + + V R + C +V R GR+ +A RM +
Sbjct: 236 S---MDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSK 292
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 248 bits (634), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 150/490 (30%), Positives = 257/490 (52%), Gaps = 50/490 (10%)
Query: 37 NTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYL----KCNCLRYARQVFDD 92
N LQ Y S Q IH+ ++ G + K L+ YL + YA +VF
Sbjct: 20 NLLQTYGVSSITKLRQ-IHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSK 78
Query: 93 LRDKTLSAY--NYMIGAYLKQGQVEESLGLVRRLLVSG-EKLDGFTFSMILKASTSTSGR 149
+ +K ++ + N +I Y + G + L R + VSG + D T+ ++KA T+ +
Sbjct: 79 I-EKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADV 137
Query: 150 NVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVIS 209
LG +H ++++ G + Y +
Sbjct: 138 R------LGETIHSVVIRSGF-------------------GSLIYVQN------------ 160
Query: 210 STSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLN 269
SL+ Y N G A +F K +KD+V +N++I G+++ + +L +Y +M
Sbjct: 161 --SLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK-PEEALALYTEMNSKG 217
Query: 270 FRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSR 329
+P+ T S++ AC+ + A +G++V ++K ++ + L+D+Y++CGRV +++
Sbjct: 218 IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAK 277
Query: 330 RVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHA 389
+FD M KN SWTS+I G NGF EA+ELF+ M+ G++P +TF+ L AC+H
Sbjct: 278 TLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHC 337
Query: 390 GLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAA 449
G+V +G E F+ M EYK++PR+EH+ C+VDLL RAG++ +A+E++ MP +PN +W
Sbjct: 338 GMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRT 397
Query: 450 LLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERG 509
LL +C +HG++++A+ A ++ +L N G YV LSN A+ ++W V ++R+ M G
Sbjct: 398 LLGACTVHGDSDLAEFARIQILQLEPN-HSGDYVLLSNMYASEQRWSDVQKIRKQMLRDG 456
Query: 510 ISKDTACSWV 519
+ K S V
Sbjct: 457 VKKVPGHSLV 466
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 248 bits (634), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 151/470 (32%), Positives = 251/470 (53%), Gaps = 46/470 (9%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQ 111
+ ++ ++ GF P + ++L++++KC + AR++FD++ ++ L +Y +I ++
Sbjct: 143 KRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNF 202
Query: 112 GQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDL--GRIVHVQILKAD 169
G E+ L + + + TF+++L+AS A LG + G+ +HV LK
Sbjct: 203 GNYVEAFELFKMMWEELSDCETHTFAVMLRAS--------AGLGSIYVGKQLHVCALKLG 254
Query: 170 VDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECI 229
V V+ V C L D Y K G I AR F+ M EK ++ ++I+GY G ++A C+
Sbjct: 255 V-VDNTFVSC-GLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCL 312
Query: 230 FQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAA 289
D V ID L+ IST +A
Sbjct: 313 LYDMRDSG-----------------------VSIDQFTLSIMIRIST---------KLAK 340
Query: 290 FEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDG 349
E+ +Q + L++ F I +AL+D YSK GRV +R VFD + +KN+ SW +++ G
Sbjct: 341 LELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGG 400
Query: 350 YGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVK 409
Y +G +A++LF+KM I V PN VTFL+ LSACA++GL ++G EIF SM + +K
Sbjct: 401 YANHGRGTDAVKLFEKM-IAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIK 459
Query: 410 PRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASE 469
PR HYAC+++LLGR G L++A F+ R P + ++WAALL++CR+ N E+ ++ A +
Sbjct: 460 PRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEK 519
Query: 470 LFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
L+ + + G YV + N + K + + E ++ +G+S AC+WV
Sbjct: 520 LYGMGPE-KLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWV 568
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 158/331 (47%), Gaps = 55/331 (16%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ +H LK G V NT +S L+ +Y KC + AR F+ + +KT A+N +I Y
Sbjct: 243 GKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYAL 302
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
G EE+L L+ + SG +D FT S++++ ST +A L +L + H +++
Sbjct: 303 HGYSEEALCLLYDMRDSGVSIDQFTLSIMIRIST-----KLAKL-ELTKQAHASLIRN-- 354
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
E + V TAL D Y K GR+ AR VFD + KN+IS +L+ GY N G DA +F
Sbjct: 355 GFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLF 414
Query: 231 QKTVDKDI----VVFNAMIE--GYSKTSECATRSLEVYIDM------------------- 265
+K + ++ V F A++ YS SE + E+++ M
Sbjct: 415 EKMIAANVAPNHVTFLAVLSACAYSGLSE---QGWEIFLSMSEVHGIKPRAMHYACMIEL 471
Query: 266 --------------QRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKL 311
+R + ++ +A+++ AC M E+G+ V +L G KL
Sbjct: 472 LGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYG---MGPEKL 528
Query: 312 GSALI--DMYSKCGRVVDSRRVFDHMHQKNV 340
G+ ++ +MY+ G+ ++ V + + K +
Sbjct: 529 GNYVVMYNMYNSMGKTAEAAGVLETLESKGL 559
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 100/204 (49%), Gaps = 17/204 (8%)
Query: 267 RLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVV 326
R +F+ +ST+ +++ AC + + ++V +M F + + ++ M+ KCG ++
Sbjct: 116 RCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMII 175
Query: 327 DSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSAC 386
D+RR+FD + ++N++S+ S+I G+ G EA ELF+ M E TF L A
Sbjct: 176 DARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETH-TFAVMLRAS 234
Query: 387 AHAGLVDKGLEI------FQSMENEYKVKPRMEHYAC-VVDLLGRAGRLNQAWEFVMRMP 439
A G + G ++ ++N + +C ++D+ + G + A MP
Sbjct: 235 AGLGSIYVGKQLHVCALKLGVVDNTF--------VSCGLIDMYSKCGDIEDARCAFECMP 286
Query: 440 ERPNSDVWAALLSSCRLHGNTEMA 463
E+ + W +++ LHG +E A
Sbjct: 287 EK-TTVAWNNVIAGYALHGYSEEA 309
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 248 bits (633), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 151/472 (31%), Positives = 247/472 (52%), Gaps = 46/472 (9%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ +H + + GF + + +L +Y K C+ YAR+VFD K ++ MIG Y++
Sbjct: 224 GKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVE 283
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDL--GRIVHVQILKA 168
++E+ + ++LV+ +M+ + A GDL GR VH +KA
Sbjct: 284 NEMIKEAGEVFFQMLVNDN------VAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKA 337
Query: 169 DVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAEC 228
+ D V+N ++IS Y G DA
Sbjct: 338 GF-----------ILDLTVQN----------------------TIISFYAKYGSLCDAFR 364
Query: 229 IFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVA 288
F + KD++ +N++I G S ++ +M+ RP+I+T ++ ACS +A
Sbjct: 365 QFSEIGLKDVISYNSLITGCVVNCR-PEESFRLFHEMRTSGIRPDITTLLGVLTACSHLA 423
Query: 289 AFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMID 348
A G + + + + +AL+DMY+KCG++ ++RVFD MH++++ SW +M+
Sbjct: 424 ALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLF 483
Query: 349 GYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSM-ENEYK 407
G+G +G EAL LF MQ E GV P+ VT L+ LSAC+H+GLVD+G ++F SM ++
Sbjct: 484 GFGIHGLGKEALSLFNSMQ-ETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFN 542
Query: 408 VKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAA 467
V PR++HY C+ DLL RAG L++A++FV +MP P+ V LLS+C + N E+ +
Sbjct: 543 VIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVS 602
Query: 468 SELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
++ L + V LSNT +AAE+W+ + +R + K+RG+ K SWV
Sbjct: 603 KKMQSLGETTE--SLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWV 652
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 159/334 (47%), Gaps = 44/334 (13%)
Query: 39 LQYYINSDTPSSGQTIHSHILKTGF-VPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKT 97
L+ I S GQ IH H+LK + ++ + + L LY CN + AR VFD++
Sbjct: 6 LETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPR 65
Query: 98 LS--AYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLG 155
++ A++ MI AY E++L L ++L SG + +T+ +LKA
Sbjct: 66 INPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAI------ 119
Query: 156 DLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLIS 215
D G+++H + +D D +CTAL D Y K G + A VFD M ++
Sbjct: 120 DDGKLIHSHVNCSDF--ATDMYVCTALVDFYAKCGELEMAIKVFDEMPKR---------- 167
Query: 216 GYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLN-FRPNI 274
D+V +NAMI G+S C T + +++DM+R++ PN+
Sbjct: 168 ---------------------DMVAWNAMISGFSLHC-CLTDVIGLFLDMRRIDGLSPNL 205
Query: 275 STFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDH 334
ST + A A G+ V + F + + + ++D+Y+K ++ +RRVFD
Sbjct: 206 STIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDL 265
Query: 335 MHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQI 368
+KN +W++MI GY +N EA E+F +M +
Sbjct: 266 DFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLV 299
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 146/338 (43%), Gaps = 50/338 (14%)
Query: 144 TSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMS 203
T RN+ LG+++H +LK + + VL LT Y + AR VFD +
Sbjct: 8 TCIRSRNLV----LGQVIHQHLLKRSLTLSSSTVL-VNLTRLYASCNEVELARHVFDEIP 62
Query: 204 EKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYI 263
+ + + ++ MI Y+ +++ A ++L++Y
Sbjct: 63 HPRI-----------------------------NPIAWDLMIRAYA-SNDFAEKALDLYY 92
Query: 264 DMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCG 323
M RP T+ ++ AC+ + A + G+ + S + + F + + +AL+D Y+KCG
Sbjct: 93 KMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCG 152
Query: 324 RVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSAL 383
+ + +VFD M ++++ +W +MI G+ + + + LF M+ G+ PN T +
Sbjct: 153 ELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMF 212
Query: 384 SACAHAGLVDKGLEIF-----QSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRM 438
A AG + +G + N+ VK ++D+ ++ + A V +
Sbjct: 213 PALGRAGALREGKAVHGYCTRMGFSNDLVVKTG------ILDVYAKSKCIIYARR-VFDL 265
Query: 439 PERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNAN 476
+ N W+A++ + EM K A F++ N
Sbjct: 266 DFKKNEVTWSAMIGG---YVENEMIKEAGEVFFQMLVN 300
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 142/356 (39%), Gaps = 73/356 (20%)
Query: 49 SSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAY 108
S G+ +H + +K GF+ + + ++ Y K L A + F ++ K + +YN +I
Sbjct: 325 SGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGC 384
Query: 109 LKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKA 168
+ + EES L + SG + D T +L A + ++A LG G H +
Sbjct: 385 VVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACS-----HLAALGH-GSSCHGYCVVH 438
Query: 169 DVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAEC 228
V +C AL D Y K G++ A+ VFD M +++++S +++ G+ GL K+A
Sbjct: 439 GYAVNTS--ICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEA-- 494
Query: 229 IFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVA 288
L ++ MQ P+ T +I+ ACS
Sbjct: 495 ------------------------------LSLFNSMQETGVNPDEVTLLAILSACSHSG 524
Query: 289 AFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMID 348
+ G+Q+ + + + F V+ DH + M D
Sbjct: 525 LVDEGKQLFNSMSRGDF------------------NVIPR---IDH--------YNCMTD 555
Query: 349 GYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMEN 404
+ G+ DEA + KM E P+ + LSAC + G E+ + M++
Sbjct: 556 LLARAGYLDEAYDFVNKMPFE----PDIRVLGTLLSACWTYKNAELGNEVSKKMQS 607
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 248 bits (633), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 159/500 (31%), Positives = 265/500 (53%), Gaps = 43/500 (8%)
Query: 23 LQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNC 82
++ HD +P S L ++L + GQ IH LK G N ++S L+ LY +
Sbjct: 406 MRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGY 465
Query: 83 LRYARQVFDDLRDKTLSAYNYMIGAYLK-QGQVEESLGLVRRLLVSGEKLDGFTFSMILK 141
L R++F + + ++N +IGA + + + E++ +G+KL+ TFS +L
Sbjct: 466 LNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLS 525
Query: 142 ASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDV 201
A +S S G+LG+ +H LK ++ E AL Y K G + +F
Sbjct: 526 AVSSLS------FGELGKQIHGLALKNNIADEATTE--NALIACYGKCGEMDGCEKIFSR 577
Query: 202 MSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEV 261
M+E+ +D V +N+MI GY +E ++L++
Sbjct: 578 MAER------------------------------RDNVTWNSMISGYIH-NELLAKALDL 606
Query: 262 YIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSK 321
M + R + +A+++ A + VA E G +V + ++ + +GSAL+DMYSK
Sbjct: 607 VWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSK 666
Query: 322 CGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLS 381
CGR+ + R F+ M +N +SW SMI GY ++G +EAL+LF+ M+++ P+ VTF+
Sbjct: 667 CGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVG 726
Query: 382 ALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPER 441
LSAC+HAGL+++G + F+SM + Y + PR+EH++C+ D+LGRAG L++ +F+ +MP +
Sbjct: 727 VLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMK 786
Query: 442 PNSDVWAALLSS-CRLHG-NTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVS 499
PN +W +L + CR +G E+ K AA LF+L YV L N AA +W+ +
Sbjct: 787 PNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVN-YVLLGNMYAAGGRWEDLV 845
Query: 500 ELREVMKERGISKDTACSWV 519
+ R+ MK+ + K+ SWV
Sbjct: 846 KARKKMKDADVKKEAGYSWV 865
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/452 (24%), Positives = 201/452 (44%), Gaps = 58/452 (12%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKC-NCLRYARQVFDDLRDKTLSAYNYMIGAYL 109
G+ IH + K + + +S L+ +Y KC + YA F D+ K ++N +I Y
Sbjct: 123 GRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYS 182
Query: 110 KQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKAD 169
+ G + + + G + +TF ++ + S + +V L + + L D
Sbjct: 183 QAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTD 242
Query: 170 VDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECI 229
+ V + L ++ K+G ++YAR VF+ M +N ++ L+ G + Q ++A +
Sbjct: 243 LFVG------SGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKL 296
Query: 230 FQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAA 289
F N+MI+ S E Y+ + L+ P S A +G
Sbjct: 297 FMD--------MNSMID----------VSPESYVIL--LSSFPEYS-LAEEVG------- 328
Query: 290 FEVGQQVQSQLMKTPFFGH-IKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMID 348
+ G++V ++ T + +G+ L++MY+KCG + D+RRVF M K+ SW SMI
Sbjct: 329 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMIT 388
Query: 349 GYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIF-QSMENEYK 407
G +NG EA+E ++ M+ + ++P T +S+LS+CA G +I +S++
Sbjct: 389 GLDQNGCFIEAVERYKSMR-RHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGID 447
Query: 408 VKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAA 467
+ + + ++ L G LN+ + MPE ++ N+ + LA
Sbjct: 448 LNVSVSN--ALMTLYAETGYLNECRKIFSSMPEHD------------QVSWNSIIGALAR 493
Query: 468 SELFKLNANGRPGAYVALSNTLAAAEKWDSVS 499
SE P A V N A +K + ++
Sbjct: 494 SE------RSLPEAVVCFLNAQRAGQKLNRIT 519
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 150/352 (42%), Gaps = 48/352 (13%)
Query: 55 HSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQV 114
HS + K + + L+ YL+ AR+VFD++ + ++ ++ Y + G+
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 115 EESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDL-GRIVHVQILKADVDVE 173
+E+L +R ++ G + + F +L+A + + +G L GR +H + K V
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRAC-----QEIGSVGILFGRQIHGLMFKLSYAV- 137
Query: 174 KDDVLCTALTDSYVKN-GRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQK 232
D V+ L Y K G + YA F + KN +S S+IS Y G + A
Sbjct: 138 -DAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSA------ 190
Query: 233 TVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASII-GACSMVAA-F 290
++ MQ RP TF S++ ACS+
Sbjct: 191 --------------------------FRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDV 224
Query: 291 EVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGY 350
+ +Q+ + K+ + +GS L+ ++K G + +R+VF+ M +N + ++ G
Sbjct: 225 RLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGL 284
Query: 351 GKNGFPDEALELFQKMQIEYGVVP-NFVTFLSAL---SACAHAGLVDKGLEI 398
+ + +EA +LF M V P ++V LS+ S GL KG E+
Sbjct: 285 VRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGL-KKGREV 335
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 248 bits (632), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 141/476 (29%), Positives = 265/476 (55%), Gaps = 12/476 (2%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ +H I + + + + L+ +Y + + AR++FD + ++ ++N +I Y
Sbjct: 163 GRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYAS 222
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
+G E+ L ++ SG ++ T+++I T G V LG + R+ + V
Sbjct: 223 EGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQT-GNYVGALGLISRMRNFPTSLDPV 281
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
+ C+ + ++ G+ + + + + +T LI+ Y + A +F
Sbjct: 282 AMIIGLKACSLI--GAIRLGKEIHGLAIHSSYDGIDNVRNT-LITMYSKCKDLRHALIVF 338
Query: 231 QKTVDKDIVVFNAMIEGYSK--TSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVA 288
++T + + +N++I GY++ SE A+ L +M F+PN T ASI+ C+ +A
Sbjct: 339 RQTEENSLCTWNSIISGYAQLNKSEEASHLLR---EMLVAGFQPNSITLASILPLCARIA 395
Query: 289 AFEVGQQVQSQLMKTPFF-GHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMI 347
+ G++ +++ F + L ++L+D+Y+K G++V +++V D M +++ ++TS+I
Sbjct: 396 NLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLI 455
Query: 348 DGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYK 407
DGYG G AL LF++M G+ P+ VT ++ LSAC+H+ LV +G +F M+ EY
Sbjct: 456 DGYGNQGEGGVALALFKEMT-RSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYG 514
Query: 408 VKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAA 467
++P ++H++C+VDL GRAG L +A + + MP +P+ WA LL++C +HGNT++ K AA
Sbjct: 515 IRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAA 574
Query: 468 SELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWVGADS 523
+L ++ PG YV ++N AAA W ++E+R +M++ G+ KD C+W+ DS
Sbjct: 575 EKLLEMKPE-NPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDS 629
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/447 (25%), Positives = 210/447 (46%), Gaps = 22/447 (4%)
Query: 2 NNGILRPFFSSRALFSPHQPFLQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKT 61
++G L F + +L + D V HS ++ L ++ +G +H+H + +
Sbjct: 15 SHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSA--ASLLSACVDVRAFLAGVQVHAHCISS 72
Query: 62 GFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLV 121
G ++ + KL+ Y N A+ + ++ +N +I +Y K EE +
Sbjct: 73 GVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAY 132
Query: 122 RRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDV-LCT 180
+R++ G + D FT+ +LKA T +VA GR+VH I +V K + +C
Sbjct: 133 KRMVSKGIRPDAFTYPSVLKACGET--LDVA----FGRVVHGSI---EVSSYKSSLYVCN 183
Query: 181 ALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKT----VDK 236
AL Y + + AR +FD M E++ +S ++I+ Y ++G++ +A +F K V+
Sbjct: 184 ALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEV 243
Query: 237 DIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIG--ACSMVAAFEVGQ 294
++ +N + G +T +L + M+ NF ++ A IIG ACS++ A +G+
Sbjct: 244 SVITWNIISGGCLQTGN-YVGALGLISRMR--NFPTSLDPVAMIIGLKACSLIGAIRLGK 300
Query: 295 QVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNG 354
++ + + + G + + LI MYSKC + + VF + ++ +W S+I GY +
Sbjct: 301 EIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLN 360
Query: 355 FPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEH 414
+EA L ++M + G PN +T S L CA + G E + K
Sbjct: 361 KSEEASHLLREMLVA-GFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTML 419
Query: 415 YACVVDLLGRAGRLNQAWEFVMRMPER 441
+ +VD+ ++G++ A + M +R
Sbjct: 420 WNSLVDVYAKSGKIVAAKQVSDLMSKR 446
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 9/178 (5%)
Query: 278 ASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQ 337
AS++ AC V AF G QV + + + H L L+ YS +++ + ++
Sbjct: 47 ASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDI 106
Query: 338 KNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLE 397
+ W +I Y KN +E + +++M + G+ P+ T+ S L AC V G
Sbjct: 107 LHPLPWNVLIASYAKNELFEEVIAAYKRM-VSKGIRPDAFTYPSVLKACGETLDVAFGRV 165
Query: 398 IFQSME-NEYKVKPRMEHYAC--VVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLS 452
+ S+E + YK Y C ++ + R + A RM ER ++ W A+++
Sbjct: 166 VHGSIEVSSYKSSL----YVCNALISMYKRFRNMGIARRLFDRMFER-DAVSWNAVIN 218
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 160/481 (33%), Positives = 251/481 (52%), Gaps = 50/481 (10%)
Query: 44 NSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNY 103
+S P + IH+ +L+TGF ++ +LL + + YARQVFD++ + +N
Sbjct: 20 SSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNT 79
Query: 104 MIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDL--GRIV 161
+ Y++ ESL L +++ G + D FT+ ++KA ++ LGD G +
Sbjct: 80 LFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKA--------ISQLGDFSCGFAL 131
Query: 162 HVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQG 221
H ++K F + I +T L+ YM G
Sbjct: 132 HAHVVKYG-----------------------------FGCLG----IVATELVMMYMKFG 158
Query: 222 LFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASII 281
AE +F+ KD+V +NA + +T A +LE + M + + T S++
Sbjct: 159 ELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAI-ALEYFNKMCADAVQFDSFTVVSML 217
Query: 282 GACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVF 341
AC + + E+G+++ + K +I + +A +DM+ KCG +R +F+ M Q+NV
Sbjct: 218 SACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVV 277
Query: 342 SWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQS 401
SW++MI GY NG EAL LF MQ E G+ PN+VTFL LSAC+HAGLV++G F
Sbjct: 278 SWSTMIVGYAMNGDSREALTLFTTMQNE-GLRPNYVTFLGVLSACSHAGLVNEGKRYFSL 336
Query: 402 M--ENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGN 459
M N+ ++PR EHYAC+VDLLGR+G L +A+EF+ +MP P++ +W ALL +C +H +
Sbjct: 337 MVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRD 396
Query: 460 TEMAKLAASELFKLNANGRPGAY-VALSNTLAAAEKWDSVSELREVMKERGISKDTACSW 518
+ + A L + + G+Y V LSN AAA KWD V ++R M++ G K A S
Sbjct: 397 MILGQKVADVLVETAPD--IGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSS 454
Query: 519 V 519
V
Sbjct: 455 V 455
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 148/430 (34%), Positives = 232/430 (53%), Gaps = 13/430 (3%)
Query: 96 KTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTS-TSGRNVAPL 154
+T ++ I + G++ E+ + ++G + + TF +L TSG
Sbjct: 34 ETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEA--- 90
Query: 155 GDLGRIVHVQILKADVDVEKDDVLC-TALTDSYVKNGRIAYARTVFDVMSEKNVISSTSL 213
LG ++H K +D ++ V+ TA+ Y K GR AR VFD M +KN ++ ++
Sbjct: 91 --LGDLLHGYACKLGLD--RNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTM 146
Query: 214 ISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPN 273
I GYM G +A +F K ++D++ + AMI G+ K +L + +MQ +P+
Sbjct: 147 IDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGY-QEEALLWFREMQISGVKPD 205
Query: 274 ISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFD 333
+ + AC+ + A G V ++ F ++++ ++LID+Y +CG V +R+VF
Sbjct: 206 YVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFY 265
Query: 334 HMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVD 393
+M ++ V SW S+I G+ NG E+L F+KMQ E G P+ VTF AL+AC+H GLV+
Sbjct: 266 NMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQ-EKGFKPDAVTFTGALTACSHVGLVE 324
Query: 394 KGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSS 453
+GL FQ M+ +Y++ PR+EHY C+VDL RAGRL A + V MP +PN V +LL++
Sbjct: 325 EGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAA 384
Query: 454 CRLHGNT-EMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISK 512
C HGN +A+ L LN YV LSN AA KW+ S++R MK G+ K
Sbjct: 385 CSNHGNNIVLAERLMKHLTDLNVKSHSN-YVILSNMYAADGKWEGASKMRRKMKGLGLKK 443
Query: 513 DTACSWVGAD 522
S + D
Sbjct: 444 QPGFSSIEID 453
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 45/265 (16%)
Query: 77 YLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTF 136
Y++ + A ++FD + ++ L ++ MI ++K+G EE+L R + +SG K D
Sbjct: 150 YMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAI 209
Query: 137 SMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDV-LCTALTDSYVKNGRIAYA 195
L A T N+ L G VH +L D K++V + +L D Y + G + +A
Sbjct: 210 IAALNACT-----NLGAL-SFGLWVHRYVLSQDF---KNNVRVSNSLIDLYCRCGCVEFA 260
Query: 196 RTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECA 255
R VF M ++ V+S S+I G+ G ++ F+K
Sbjct: 261 RQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRK----------------------- 297
Query: 256 TRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPF--FGHIKLGS 313
MQ F+P+ TF + ACS V E G + Q+MK + I+
Sbjct: 298 ---------MQEKGFKPDAVTFTGALTACSHVGLVEEGLRY-FQIMKCDYRISPRIEHYG 347
Query: 314 ALIDMYSKCGRVVDSRRVFDHMHQK 338
L+D+YS+ GR+ D+ ++ M K
Sbjct: 348 CLVDLYSRAGRLEDALKLVQSMPMK 372
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 97/222 (43%), Gaps = 10/222 (4%)
Query: 1 MNNGILRPFFSSRALFSPHQPFLQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILK 60
M NG ++ + AL + +Q P + L N S G +H ++L
Sbjct: 177 MINGFVKKGYQEEALLWFRE--MQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLS 234
Query: 61 TGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGL 120
F N +S L+ LY +C C+ +ARQVF ++ +T+ ++N +I + G ESL
Sbjct: 235 QDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVY 294
Query: 121 VRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCT 180
R++ G K D TF+ L A + L + G + + QI+K D +
Sbjct: 295 FRKMQEKGFKPDAVTFTGALTACSHVG------LVEEG-LRYFQIMKCDYRISPRIEHYG 347
Query: 181 ALTDSYVKNGRIAYARTVFDVMSEK-NVISSTSLISGYMNQG 221
L D Y + GR+ A + M K N + SL++ N G
Sbjct: 348 CLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHG 389
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 156/539 (28%), Positives = 263/539 (48%), Gaps = 91/539 (16%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G +H IL++ F + + LL +Y+ + AR VFD ++++ + ++N MI Y +
Sbjct: 136 GLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYR 195
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTS----GRNVAPLGDLGRIVHVQIL 166
G + ++L + ++ LD T +L GRNV L + R L
Sbjct: 196 NGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKR------L 249
Query: 167 KADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQG----- 221
++V+ AL + Y+K GR+ AR VFD M ++VI+ T +I+GY G
Sbjct: 250 GDKIEVK------NALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENA 303
Query: 222 ------------------------------LFKDAECI----FQKTVDKDIVVFNAMIEG 247
D +C+ ++ V DI++ ++I
Sbjct: 304 LELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISM 363
Query: 248 YSKT------------------------------SECATRSLEVYIDMQRLNFRPNISTF 277
Y+K +E + +L ++ M+R + PNI+T
Sbjct: 364 YAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATL 423
Query: 278 ASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQ 337
S++ A + +A + L KT F + + L+ +YSKCG + + ++F+ + +
Sbjct: 424 NSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQE 483
Query: 338 K----NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVD 393
K +V W ++I GYG +G AL++F +M + GV PN +TF SAL+AC+H+GLV+
Sbjct: 484 KHKSKDVVLWGALISGYGMHGDGHNALQVFMEM-VRSGVTPNEITFTSALNACSHSGLVE 542
Query: 394 KGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSS 453
+GL +F+ M YK R HY C+VDLLGRAGRL++A+ + +P P S VW ALL++
Sbjct: 543 EGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAA 602
Query: 454 CRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISK 512
C H N ++ ++AA++LF+L G YV L+N AA +W + ++R +M+ G+ K
Sbjct: 603 CVTHENVQLGEMAANKLFELEPEN-TGNYVLLANIYAALGRWKDMEKVRSMMENVGLRK 660
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 183/359 (50%), Gaps = 44/359 (12%)
Query: 39 LQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTL 98
L ++ + + S + +H H++ G V +S L V Y C + YAR++F+++ +L
Sbjct: 22 LNHFAATQSISKTKALHCHVITGGRVSGHILS-TLSVTYALCGHITYARKLFEEMPQSSL 80
Query: 99 SAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKL--DGFTFSMILKASTSTSGRNVAPLGD 156
+YN +I Y+++G +++ + R++ G K DG+T+ + KA+
Sbjct: 81 LSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMK------ 134
Query: 157 LGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISG 216
LG +VH +IL++ +D + AL Y+ G++ AR VFDVM ++VIS ++ISG
Sbjct: 135 LGLVVHGRILRSWFG--RDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISG 192
Query: 217 YMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNIST 276
Y G DA +F V++ + + +A T
Sbjct: 193 YYRNGYMNDALMMFDWMVNESVDLDHA--------------------------------T 220
Query: 277 FASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMH 336
S++ C + E+G+ V + + I++ +AL++MY KCGR+ ++R VFD M
Sbjct: 221 IVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME 280
Query: 337 QKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKG 395
+++V +WT MI+GY ++G + ALEL + MQ E GV PN VT S +S C A V+ G
Sbjct: 281 RRDVITWTCMINGYTEDGDVENALELCRLMQFE-GVRPNAVTIASLVSVCGDALKVNDG 338
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 139/284 (48%), Gaps = 38/284 (13%)
Query: 178 LCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKD 237
+ + L+ +Y G I YAR +F+ M + +++S +I Y+ +GL+ DA +F + V +
Sbjct: 51 ILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEG 110
Query: 238 IVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQ 297
+ +C P+ T+ + A + + ++G V
Sbjct: 111 V--------------KCV----------------PDGYTYPFVAKAAGELKSMKLGLVVH 140
Query: 298 SQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPD 357
+++++ F + +AL+ MY G+V +R VFD M ++V SW +MI GY +NG+ +
Sbjct: 141 GRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMN 200
Query: 358 EALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYAC 417
+AL +F M + V + T +S L C H ++ G + + +E E ++ ++E
Sbjct: 201 DALMMFDWM-VNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVE-EKRLGDKIEVKNA 258
Query: 418 VVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTE 461
+V++ + GR+++A FV ER + W +C ++G TE
Sbjct: 259 LVNMYLKCGRMDEA-RFVFDRMERRDVITW-----TCMINGYTE 296
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 245 bits (625), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 153/516 (29%), Positives = 265/516 (51%), Gaps = 29/516 (5%)
Query: 27 DFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYA 86
+F + L+ L+ + G+ IH+ IL G ++ ++ L+ +Y KC LR A
Sbjct: 182 NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMA 241
Query: 87 RQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRL----------LVSG-----EKL 131
+ + +R+ + + +I Y G+V ES GL R ++SG K+
Sbjct: 242 SYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKM 301
Query: 132 DGFTFSMILKASTSTSGRNVAP-------LG--DLGRIVHVQILKADVDVEKDDVLCTAL 182
+ ++ T R +A LG + G+ +H K + D V+ + L
Sbjct: 302 EALVLFNEMRNETREDSRTLAAVINACIGLGFLETGKQMHCHACK--FGLIDDIVVASTL 359
Query: 183 TDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFN 242
D Y K G A +F + + I S+I Y + G DA+ +F++ +K ++ +N
Sbjct: 360 LDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWN 419
Query: 243 AMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMK 302
+M G+S+ C +LE + M +L+ + + +S+I AC+ +++ E+G+QV ++
Sbjct: 420 SMTNGFSQNG-CTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATI 478
Query: 303 TPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALEL 362
+ S+LID+Y KCG V RRVFD M + + W SMI GY NG EA++L
Sbjct: 479 VGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDL 538
Query: 363 FQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLL 422
F+KM + G+ P +TF+ L+AC + GLV++G ++F+SM+ ++ P EH++C+VDLL
Sbjct: 539 FKKMSVA-GIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLL 597
Query: 423 GRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAY 482
RAG + +A V MP + +W+++L C +G M K AA ++ +L AY
Sbjct: 598 ARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSV-AY 656
Query: 483 VALSNTLAAAEKWDSVSELREVMKERGISKDTACSW 518
V LS A + W+S + +R++M+E ++K+ SW
Sbjct: 657 VQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSW 692
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 123/284 (43%), Gaps = 68/284 (23%)
Query: 177 VLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQG------LFKD----- 225
++ L Y ++G++ AR +FD M ++N S ++I GYMN G F D
Sbjct: 63 IVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPER 122
Query: 226 --------------------AECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDM 265
A +F +KD+V N+++ GY A +L ++
Sbjct: 123 DGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGY-AEEALRLF--- 178
Query: 266 QRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSK---- 321
+ LNF + T +++ AC+ + A + G+Q+ +Q++ K+ S+L+++Y+K
Sbjct: 179 KELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDL 238
Query: 322 ---------------------------CGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNG 354
CGRV +SR +FD + V W SMI GY N
Sbjct: 239 RMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANN 298
Query: 355 FPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEI 398
EAL LF +M+ E + T + ++AC G ++ G ++
Sbjct: 299 MKMEALVLFNEMRNE--TREDSRTLAAVINACIGLGFLETGKQM 340
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 277 FASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKL-GSALIDMYSKCGRVVDSRRVFDHM 335
+ ++ +CS + +Q L+K F I + + L+ MYS+ G++ +R +FD M
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEM 88
Query: 336 HQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKG 395
+N FSW +MI+GY +G +L F M G N V +S A AG +
Sbjct: 89 PDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVV-----VSGFAKAGELSVA 143
Query: 396 LEIFQSM 402
+F +M
Sbjct: 144 RRLFNAM 150
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 106/249 (42%), Gaps = 52/249 (20%)
Query: 207 VISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDM- 265
VI + L+ Y G A +F + D++ +N MIEGY + E T SL + DM
Sbjct: 62 VIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGT-SLR-FFDMM 119
Query: 266 -QRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGR 324
+R + N+ ++ ++K G
Sbjct: 120 PERDGYSWNV----------------------------------------VVSGFAKAGE 139
Query: 325 VVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALS 384
+ +RR+F+ M +K+V + S++ GY NG+ +EAL LF+++ + +T + L
Sbjct: 140 LSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFS----ADAITLTTVLK 195
Query: 385 ACAHAGLVDKGLEIF-QSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPN 443
ACA + G +I Q + + +M + +V++ + G L A +++ P+
Sbjct: 196 ACAELEALKCGKQIHAQILIGGVECDSKMN--SSLVNVYAKCGDLRMA-SYMLEQIREPD 252
Query: 444 SDVWAALLS 452
+AL+S
Sbjct: 253 DHSLSALIS 261
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 244 bits (624), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 231/416 (55%), Gaps = 12/416 (2%)
Query: 105 IGAYLKQGQVEESLGLVRRLLVS-GEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHV 163
+ +Y QG E++L L ++ S LD FS+ LK S + + R V LG VH
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALK-SCAAAFRPV-----LGGSVHA 72
Query: 164 QILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLF 223
+K++ + V C AL D Y K +++AR +FD + ++N + ++IS Y + G
Sbjct: 73 HSVKSNF-LSNPFVGC-ALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKV 130
Query: 224 KDAECIFQKT-VDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIG 282
K+A +++ V + FNA+I+G T + + R++E Y M F+PN+ T +++
Sbjct: 131 KEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVS 190
Query: 283 ACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFS 342
ACS + AF + +++ S + H +L S L++ Y +CG +V + VFD M ++V +
Sbjct: 191 ACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVA 250
Query: 343 WTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSM 402
W+S+I Y +G + AL+ FQ+M++ V P+ + FL+ L AC+HAGL D+ L F+ M
Sbjct: 251 WSSLISAYALHGDAESALKTFQEMELA-KVTPDDIAFLNVLKACSHAGLADEALVYFKRM 309
Query: 403 ENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEM 462
+ +Y ++ +HY+C+VD+L R GR +A++ + MPE+P + W ALL +CR +G E+
Sbjct: 310 QGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIEL 369
Query: 463 AKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSW 518
A++AA EL + P YV L + + + LR MKE G+ SW
Sbjct: 370 AEIAARELLMVEPEN-PANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 117/290 (40%), Gaps = 65/290 (22%)
Query: 206 NVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDM 265
+IS T +S Y NQG + A +F + + +A + + S CA
Sbjct: 11 KLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKS-CAA--------- 60
Query: 266 QRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRV 325
FRP + G V + +K+ F + +G AL+DMY KC V
Sbjct: 61 ---AFRPVL------------------GGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSV 99
Query: 326 VDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQ------------------ 367
+R++FD + Q+N W +MI Y G EA+EL++ M
Sbjct: 100 SHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGT 159
Query: 368 --------------IEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRME 413
IE+ PN +T L+ +SAC+ G EI S ++P +
Sbjct: 160 EDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEI-HSYAFRNLIEPHPQ 218
Query: 414 HYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMA 463
+ +V+ GR G + + V E + W++L+S+ LHG+ E A
Sbjct: 219 LKSGLVEAYGRCGSIVYV-QLVFDSMEDRDVVAWSSLISAYALHGDAESA 267
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 124/294 (42%), Gaps = 45/294 (15%)
Query: 48 PSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGA 107
P G ++H+H +K+ F+ N + LL +Y KC + +AR++FD++ + +N MI
Sbjct: 64 PVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISH 123
Query: 108 YLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTST---SGRNV------------- 151
Y G+V+E++ L + V + +F+ I+K T S R +
Sbjct: 124 YTHCGKVKEAVELYEAMDVMPNE---SSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKP 180
Query: 152 ------------APLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVF 199
+ +G I + +E L + L ++Y + G I Y + VF
Sbjct: 181 NLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVF 240
Query: 200 DVMSEKNVISSTSLISGYMNQGLFKDAECIFQ-----KTVDKDIVVFNAMIEGYSKTSEC 254
D M +++V++ +SLIS Y G + A FQ K DI N + K
Sbjct: 241 DSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVL-----KACSH 295
Query: 255 ATRSLEVYIDMQRLN----FRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTP 304
A + E + +R+ R + ++ ++ S V FE +V + + P
Sbjct: 296 AGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKP 349
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 154/503 (30%), Positives = 264/503 (52%), Gaps = 30/503 (5%)
Query: 23 LQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNC 82
+ N P S +++ L+ + G+ IH+ LK G + L+ LY +
Sbjct: 95 MHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGY 154
Query: 83 LRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKA 142
+ A++ FDD+ +K ++N ++ YL+ G+++E+ RR+ + D ++++I+ +
Sbjct: 155 IELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEA----RRVFDKIPEKDAVSWNLIISS 210
Query: 143 STSTSGRNVAPLGDLGR---IVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVF 199
A GD+G + LK+ L YV + ART F
Sbjct: 211 --------YAKKGDMGNACSLFSAMPLKSPAS-------WNILIGGYVNCREMKLARTYF 255
Query: 200 DVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSL 259
D M +KN +S ++ISGY G + AE +F+ KD +V++AMI Y++ + +L
Sbjct: 256 DAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGK-PKDAL 314
Query: 260 EVYIDMQRLN--FRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALID 317
+++ M N +P+ T +S++ A S + G V+S + + L ++LID
Sbjct: 315 KLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLID 374
Query: 318 MYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFV 377
+Y K G + ++F ++++K+ S+++MI G G NG EA LF M IE + PN V
Sbjct: 375 LYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAM-IEKKIPPNVV 433
Query: 378 TFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMR 437
TF LSA +H+GLV +G + F SM+ ++ ++P +HY +VD+LGRAGRL +A+E +
Sbjct: 434 TFTGLLSAYSHSGLVQEGYKCFNSMK-DHNLEPSADHYGIMVDMLGRAGRLEEAYELIKS 492
Query: 438 MPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVA-LSNTLAAAEKWD 496
MP +PN+ VW ALL + LH N E ++A S KL + P Y++ L+ ++ +WD
Sbjct: 493 MPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETD--PTGYLSHLAMIYSSVGRWD 550
Query: 497 SVSELREVMKERGISKDTACSWV 519
+R+ +KE+ + K CSWV
Sbjct: 551 DARTVRDSIKEKKLCKTLGCSWV 573
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 103/220 (46%), Gaps = 21/220 (9%)
Query: 257 RSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALI 316
+++VYIDM P+ S++ AC + G+ + +Q +K G + + + L+
Sbjct: 87 ETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLV 146
Query: 317 DMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNF 376
+YS+ G + +++ FD + +KN SW S++ GY ++G DEA +F K+ + V N
Sbjct: 147 GLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNL 206
Query: 377 VTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLG---RAGRLNQAWE 433
+ +S+ A G + +F +M ++ A L+G + A
Sbjct: 207 I-----ISSYAKKGDMGNACSLFSAMP--------LKSPASWNILIGGYVNCREMKLART 253
Query: 434 FVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKL 473
+ MP++ N W ++S G+ + +A ELF+L
Sbjct: 254 YFDAMPQK-NGVSWITMISGYTKLGDVQ----SAEELFRL 288
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 149/470 (31%), Positives = 245/470 (52%), Gaps = 42/470 (8%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ +H +++ GF + ++ LL Y K + A +F + +K + +++ +I Y++
Sbjct: 182 GRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQ 241
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
G E+L + ++ G + + T +L+A + + GR H ++ +
Sbjct: 242 NGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDL------EQGRKTHELAIRKGL 295
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
+ E + TAL D Y+K A VF + K+V+S +LISG+ G+
Sbjct: 296 ETEVK--VSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGM-------- 345
Query: 231 QKTVDKDIVVFNAMIEGYSKTSECATRSLEVY-IDMQRLNFRPNISTFASIIGACSMVAA 289
A RS+E + I + N RP+ ++G+CS +
Sbjct: 346 ------------------------AHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGF 381
Query: 290 FEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDG 349
E + S ++K F + +G++L+++YS+CG + ++ +VF+ + K+ WTS+I G
Sbjct: 382 LEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITG 441
Query: 350 YGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVK 409
YG +G +ALE F M V PN VTFLS LSAC+HAGL+ +GL IF+ M N+Y++
Sbjct: 442 YGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLA 501
Query: 410 PRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASE 469
P +EHYA +VDLLGR G L+ A E RMP P + LL +CR+H N EMA+ A +
Sbjct: 502 PNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKK 561
Query: 470 LFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
LF+L +N G Y+ +SN +W++V +LR +K+RGI K A S +
Sbjct: 562 LFELESN-HAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLI 610
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 183/410 (44%), Gaps = 44/410 (10%)
Query: 51 GQTIHSHILK-TGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYL 109
G+ IH + K + + L+ +Y+KC + A ++FD+L + ++ M+ +
Sbjct: 79 GEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFE 138
Query: 110 KQGQVEESLGLVRRLLVSGE-KLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKA 168
K G +++ RR++++ + D T ++ A T S LGR VH +++
Sbjct: 139 KNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSR------LGRCVHGFVIR- 191
Query: 169 DVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAEC 228
R + +S N SL++ Y FK+A
Sbjct: 192 ---------------------------RGFSNDLSLVN-----SLLNCYAKSRAFKEAVN 219
Query: 229 IFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVA 288
+F+ +KD++ ++ +I Y + A +L V+ DM PN++T ++ AC+
Sbjct: 220 LFKMIAEKDVISWSTVIACYVQNG-AAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAH 278
Query: 289 AFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMID 348
E G++ ++ +K+ +AL+DMY KC ++ VF + +K+V SW ++I
Sbjct: 279 DLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALIS 338
Query: 349 GYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKV 408
G+ NG ++E F M +E P+ + + L +C+ G +++ + F S +Y
Sbjct: 339 GFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQA-KCFHSYVIKYGF 397
Query: 409 KPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHG 458
A +V+L R G L A + V ++ VW +L++ +HG
Sbjct: 398 DSNPFIGASLVELYSRCGSLGNASK-VFNGIALKDTVVWTSLITGYGIHG 446
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 185/403 (45%), Gaps = 56/403 (13%)
Query: 86 ARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTS 145
ARQ+F ++ ++L +N ++ + ++ Q EE L + EK D FT + LKA
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 146 TSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEK 205
N G ++H +K DV + D + ++L Y+K GR+ A +FD + +
Sbjct: 73 LREVN------YGEMIH-GFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP 125
Query: 206 NVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDM 265
++++ +S++SG+ G A F++ V V
Sbjct: 126 DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVT------------------------- 160
Query: 266 QRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRV 325
P+ T +++ AC+ ++ +G+ V +++ F + L ++L++ Y+K
Sbjct: 161 ------PDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAF 214
Query: 326 VDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSA 385
++ +F + +K+V SW+++I Y +NG EAL +F M ++ G PN T L L A
Sbjct: 215 KEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDM-MDDGTEPNVATVLCVLQA 273
Query: 386 CAHAGLVDKG-----LEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPE 440
CA A +++G L I + +E E KV +VD+ + +A+ R+P
Sbjct: 274 CAAAHDLEQGRKTHELAIRKGLETEVKVS------TALVDMYMKCFSPEEAYAVFSRIP- 326
Query: 441 RPNSDVWAALLSSCRLHGNTEMAKLAASE--LFKLNANGRPGA 481
R + W AL+S L+G MA + E + L N RP A
Sbjct: 327 RKDVVSWVALISGFTLNG---MAHRSIEEFSIMLLENNTRPDA 366
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 148/464 (31%), Positives = 244/464 (52%), Gaps = 43/464 (9%)
Query: 50 SGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYL 109
+G IH +K G + ++ L+ +Y + + A++VFD++ + + ++ YL
Sbjct: 127 NGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYL 186
Query: 110 KQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVH-VQILKA 168
K + E L + +G LD T ++KA + G +G+ VH V I ++
Sbjct: 187 KYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFA------GKVGKCVHGVSIRRS 240
Query: 169 DVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAEC 228
+D + D L ++ D YVK L +A
Sbjct: 241 FID--QSDYLQASIIDMYVKCR-------------------------------LLDNARK 267
Query: 229 IFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVA 288
+F+ +VD+++V++ +I G++K E A + +++ M R + PN T A+I+ +CS +
Sbjct: 268 LFETSVDRNVVMWTTLISGFAKC-ERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLG 326
Query: 289 AFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMID 348
+ G+ V +++ ++ IDMY++CG + +R VFD M ++NV SW+SMI+
Sbjct: 327 SLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMIN 386
Query: 349 GYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKV 408
+G NG +EAL+ F KM+ + VVPN VTF+S LSAC+H+G V +G + F+SM +Y V
Sbjct: 387 AFGINGLFEEALDCFHKMKSQ-NVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGV 445
Query: 409 KPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAAS 468
P EHYAC+VDLLGRAG + +A F+ MP +P + W ALLS+CR+H ++A A
Sbjct: 446 VPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAE 505
Query: 469 ELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISK 512
+L + + YV LSN A A W+ V+ +R M +G K
Sbjct: 506 KLLSMEPE-KSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRK 548
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 130/302 (43%), Gaps = 49/302 (16%)
Query: 162 HVQILKADVDV---EKDDVLCTALTDSYVKNGRIAYARTVFDVMS--EKNVISSTSLISG 216
H Q + A V + E + VL ++LT++Y+++ R+ +A + F+ + ++N S
Sbjct: 22 HTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHS------- 74
Query: 217 YMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECA-TRSLEVYIDMQRLNFRPNIS 275
+N ++ GYSK+ C + L +Y M+R +
Sbjct: 75 ------------------------WNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSF 110
Query: 276 TFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHM 335
I AC + E G + MK + +L++MY++ G + +++VFD +
Sbjct: 111 NLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEI 170
Query: 336 HQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAH--AGLVD 393
+N W ++ GY K E LF M+ + G+ + +T + + AC + AG V
Sbjct: 171 PVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMR-DTGLALDALTLICLVKACGNVFAGKVG 229
Query: 394 K---GLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAAL 450
K G+ I +S ++ A ++D+ + L+ A + +R N +W L
Sbjct: 230 KCVHGVSIRRSFIDQSDYLQ-----ASIIDMYVKCRLLDNARKLFETSVDR-NVVMWTTL 283
Query: 451 LS 452
+S
Sbjct: 284 IS 285
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 143/471 (30%), Positives = 243/471 (51%), Gaps = 44/471 (9%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQ 111
Q +H+H++ TG+ + ++ KL+ L + Y +F + +N +I + K
Sbjct: 26 QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKL 85
Query: 112 GQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVD 171
+ RR+L S +TF+ ++K+ S + G+ VH + +
Sbjct: 86 RLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRI------GKGVHCHAVVSGFG 139
Query: 172 VEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQ 231
+ D + AL Y K G + AR VFD M E
Sbjct: 140 L--DTYVQAALVTFYSKCGDMEGARQVFDRMPE--------------------------- 170
Query: 232 KTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFE 291
K IV +N+++ G+ + A +++V+ M+ F P+ +TF S++ AC+ A
Sbjct: 171 ----KSIVAWNSLVSGFEQNG-LADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVS 225
Query: 292 VGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYG 351
+G V ++ ++KLG+ALI++YS+CG V +R VFD M + NV +WT+MI YG
Sbjct: 226 LGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYG 285
Query: 352 KNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPR 411
+G+ +A+ELF KM+ + G +PN VTF++ LSACAHAGLV++G +++ M Y++ P
Sbjct: 286 THGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPG 345
Query: 412 MEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSD---VWAALLSSCRLHGNTEMAKLAAS 468
+EH+ C+VD+LGRAG L++A++F+ ++ + +W A+L +C++H N ++ A
Sbjct: 346 VEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAK 405
Query: 469 ELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
L L + PG +V LSN A + K D VS +R+ M + K S +
Sbjct: 406 RLIALEPDN-PGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVI 455
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 145/352 (41%), Gaps = 70/352 (19%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ +H H + +GF +T + L+ Y KC + ARQVFD + +K++ A+N ++ + +
Sbjct: 126 GKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQ 185
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
G +E++ + ++ SG + D TF +L A T + LG VH I+ +
Sbjct: 186 NGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVS------LGSWVHQYIISEGL 239
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
D+ L TAL + Y + G + AR VFD M E NV + T++IS Y G + A +F
Sbjct: 240 DLNVK--LGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELF 297
Query: 231 QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAF 290
K D +C PN TF +++ AC+
Sbjct: 298 NKMED-----------------DCGP--------------IPNNVTFVAVLSACAHAGLV 326
Query: 291 EVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGY 350
E G+ V ++ K S R+ V M+D
Sbjct: 327 EEGRSVYKRMTK-------------------------SYRLI-----PGVEHHVCMVDML 356
Query: 351 GKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSM 402
G+ GF DEA + ++ G + + L AC D G+EI + +
Sbjct: 357 GRAGFLDEAYKFIHQLDAT-GKATAPALWTAMLGACKMHRNYDLGVEIAKRL 407
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 9/152 (5%)
Query: 20 QPFLQNHD--FVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLY 77
Q F Q + F P S + L + S G +H +I+ G N + L+ LY
Sbjct: 194 QVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLY 253
Query: 78 LKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVS-GEKLDGFTF 136
+C + AR+VFD +++ ++A+ MI AY G ++++ L ++ G + TF
Sbjct: 254 SRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTF 313
Query: 137 SMILKASTSTSGRNVAPLGDLGRIVHVQILKA 168
+L A A L + GR V+ ++ K+
Sbjct: 314 VAVLSACAH------AGLVEEGRSVYKRMTKS 339
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 154/525 (29%), Positives = 260/525 (49%), Gaps = 59/525 (11%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQ 111
+ +H+ I++ + +I+ KL+ C A +VF+ +++ + N +I A+ +
Sbjct: 36 KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQN 95
Query: 112 GQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPL-----GDLGRIVHVQIL 166
Q ++ + + G D FT+ +LKA + S V + LG + +
Sbjct: 96 SQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVP 155
Query: 167 KADVDV--------------------EKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKN 206
A +D E+D V ++ VK G + AR +FD M +++
Sbjct: 156 NALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRD 215
Query: 207 VISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSEC------------ 254
+IS +++ GY A +F+K +++ V ++ M+ GYSK +
Sbjct: 216 LISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPL 275
Query: 255 ---------------ATRSLEVYID-----MQRLNFRPNISTFASIIGACSMVAAFEVGQ 294
A + L D M + + + SI+ AC+ +G
Sbjct: 276 PAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGM 335
Query: 295 QVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNG 354
++ S L ++ + + +AL+DMY+KCG + + VF+ + +K++ SW +M+ G G +G
Sbjct: 336 RIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHG 395
Query: 355 FPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEH 414
EA+ELF +M+ E G+ P+ VTF++ L +C HAGL+D+G++ F SME Y + P++EH
Sbjct: 396 HGKEAIELFSRMRRE-GIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEH 454
Query: 415 YACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLN 474
Y C+VDLLGR GRL +A + V MP PN +W ALL +CR+H ++AK L KL+
Sbjct: 455 YGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLD 514
Query: 475 ANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
PG Y LSN AAAE W+ V+++R MK G+ K + S V
Sbjct: 515 PCD-PGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSV 558
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 148/471 (31%), Positives = 254/471 (53%), Gaps = 23/471 (4%)
Query: 54 IHSHILKTGFVPNTNISIKLLVLYLK-CNCLR---YARQVFDDLRDKTLSAYNYMIGAYL 109
IH+H+L+ F+ +N+ LL ++ C L YA +VF +++ + +N MI Y
Sbjct: 23 IHAHLLRH-FLHGSNL---LLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYS 78
Query: 110 KQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDL--GRIVHVQILK 167
G ESL + G D +T++ +LK+ +S L DL G+ VH ++++
Sbjct: 79 LVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSS--------LSDLRFGKCVHGELIR 130
Query: 168 ADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAE 227
+ + + + Y GR+ A+ VFD MSE+NV+ +I G+ + G +
Sbjct: 131 --TGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGL 188
Query: 228 CIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMV 287
+F++ ++ IV +N+MI SK +LE++ +M F P+ +T +++ + +
Sbjct: 189 HLFKQMSERSIVSWNSMISSLSKCGR-DREALELFCEMIDQGFDPDEATVVTVLPISASL 247
Query: 288 AAFEVGQQVQSQLMKTPFFGH-IKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSM 346
+ G+ + S + F I +G+AL+D Y K G + + +F M ++NV SW ++
Sbjct: 248 GVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTL 307
Query: 347 IDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEY 406
I G NG + ++LF M E V PN TFL L+ C++ G V++G E+F M +
Sbjct: 308 ISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERF 367
Query: 407 KVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLA 466
K++ R EHY +VDL+ R+GR+ +A++F+ MP N+ +W +LLS+CR HG+ ++A++A
Sbjct: 368 KLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVA 427
Query: 467 ASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACS 517
A EL K+ G G YV LSN A +W V ++R +MK+ + K T S
Sbjct: 428 AMELVKIEP-GNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQS 477
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 154/373 (41%), Gaps = 81/373 (21%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ +H +++TGF I I ++ LY + A++VFD++ ++ + +N MI +
Sbjct: 121 GKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCD 180
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPL------------GDLG 158
G VE L L +++ E+ SMI +S S GR+ L D
Sbjct: 181 SGDVERGLHLFKQM---SERSIVSWNSMI--SSLSKCGRDREALELFCEMIDQGFDPDEA 235
Query: 159 RIVHVQILKADVDVE----------------KDDV-LCTALTDSYVKNGRIAYARTVFDV 201
+V V + A + V KD + + AL D Y K+G + A +F
Sbjct: 236 TVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRK 295
Query: 202 MSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEV 261
M +NV+S +LISG G + I +F+AMIE
Sbjct: 296 MQRRNVVSWNTLISGSAVNG-----------KGEFGIDLFDAMIE--------------- 329
Query: 262 YIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLM-------KTPFFGHIKLGSA 314
PN +TF ++ CS E G+++ +M +T +G A
Sbjct: 330 -----EGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYG------A 378
Query: 315 LIDMYSKCGRVVDSRRVFDHMH-QKNVFSWTSMIDGYGKNGFPDEA-LELFQKMQIEYGV 372
++D+ S+ GR+ ++ + +M N W S++ +G A + + ++IE G
Sbjct: 379 MVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGN 438
Query: 373 VPNFVTFLSALSA 385
N+V LS L A
Sbjct: 439 SGNYV-LLSNLYA 450
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 148/476 (31%), Positives = 248/476 (52%), Gaps = 51/476 (10%)
Query: 77 YLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTF 136
YL+ L A +F ++ ++ + ++N MI Y + G+++++L L F
Sbjct: 119 YLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALEL---------------F 163
Query: 137 SMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYAR 196
+ + + + V L GRI L + +D V TA+ D KNG++ AR
Sbjct: 164 DEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMP-RRDVVSWTAMVDGLAKNGKVDEAR 222
Query: 197 TVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSE--- 253
+FD M E+N+IS ++I+GY +A+ +FQ ++D +N MI G+ + E
Sbjct: 223 RLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNK 282
Query: 254 -CA--------------------------TRSLEVYIDMQRL-NFRPNISTFASIIGACS 285
C +L V+ M R + +PN+ T+ SI+ ACS
Sbjct: 283 ACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACS 342
Query: 286 MVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDH--MHQKNVFSW 343
+A GQQ+ + K+ + + SAL++MYSK G ++ +R++FD+ + Q+++ SW
Sbjct: 343 DLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISW 402
Query: 344 TSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSME 403
SMI Y +G EA+E++ +M+ ++G P+ VT+L+ L AC+HAGLV+KG+E F+ +
Sbjct: 403 NSMIAVYAHHGHGKEAIEMYNQMR-KHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLV 461
Query: 404 NEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMA 463
+ + R EHY C+VDL GRAGRL F+ R + + A+LS+C +H +A
Sbjct: 462 RDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIA 521
Query: 464 KLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
K ++ + ++ G YV +SN AA K + +E+R MKE+G+ K CSWV
Sbjct: 522 KEVVKKVLETGSDD-AGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWV 576
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 159/318 (50%), Gaps = 30/318 (9%)
Query: 86 ARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTS 145
AR++FD L ++ + + ++I Y+K G + E+ L R+ + + T++ ++
Sbjct: 65 ARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRV---DSRKNVVTWTAMVSGYLR 121
Query: 146 TSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEK 205
+ ++A ++L ++ E++ V + D Y ++GRI A +FD M E+
Sbjct: 122 SKQLSIA-----------EMLFQEMP-ERNVVSWNTMIDGYAQSGRIDKALELFDEMPER 169
Query: 206 NVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSEC--ATRSLEVYI 263
N++S S++ + +G +A +F++ +D+V + AM++G +K + A R +
Sbjct: 170 NIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMP 229
Query: 264 DMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCG 323
+ +++ I+ +A F+V + T G I+ +M CG
Sbjct: 230 ERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNR----EMNKACG 285
Query: 324 RVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSAL 383
+FD M +KNV SWT+MI GY +N +EAL +F KM + V PN T++S L
Sbjct: 286 -------LFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSIL 338
Query: 384 SACAH-AGLVDKGLEIFQ 400
SAC+ AGLV+ G +I Q
Sbjct: 339 SACSDLAGLVE-GQQIHQ 355
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 155/309 (50%), Gaps = 28/309 (9%)
Query: 182 LTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVD--KDIV 239
L K G+IA AR +FD + E++V++ T +I+GY+ G ++A +F + VD K++V
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDR-VDSRKNVV 110
Query: 240 VFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQ 299
+ AM+ GY ++ + + + ++ +M N+ ++ ++I + + ++ +
Sbjct: 111 TWTAMVSGYLRSKQLSIAEM-LFQEMP----ERNVVSWNTMIDGYAQSGRIDKALELFDE 165
Query: 300 LMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEA 359
+ + + AL+ + GR+ ++ +F+ M +++V SWT+M+DG KNG DEA
Sbjct: 166 MPERNIVSWNSMVKALV----QRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEA 221
Query: 360 LELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSM-ENEYKVKPRMEHYACV 418
LF M N +++ + ++ A +D+ ++FQ M E ++ + +
Sbjct: 222 RRLFDCMPER-----NIISWNAMITGYAQNNRIDEADQLFQVMPERDFA------SWNTM 270
Query: 419 VDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGR 478
+ R +N+A RMPE+ N W +++ + E A S++ + + + +
Sbjct: 271 ITGFIRNREMNKACGLFDRMPEK-NVISWTTMITGYVENKENEEALNVFSKMLR-DGSVK 328
Query: 479 P--GAYVAL 485
P G YV++
Sbjct: 329 PNVGTYVSI 337
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 112/259 (43%), Gaps = 54/259 (20%)
Query: 196 RTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECA 255
R+++ S V LI G +A +F ++D+V + +I GY K +
Sbjct: 35 RSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGD-- 92
Query: 256 TRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSAL 315
R D R++ R N+ T+ +A+
Sbjct: 93 MREARELFD--RVDSRKNVVTW-----------------------------------TAM 115
Query: 316 IDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPN 375
+ Y + ++ + +F M ++NV SW +MIDGY ++G D+ALELF +M N
Sbjct: 116 VSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPER-----N 170
Query: 376 FVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRME--HYACVVDLLGRAGRLNQAWE 433
V++ S + A G +D+ + +F+ M PR + + +VD L + G++++A
Sbjct: 171 IVSWNSMVKALVQRGRIDEAMNLFERM-------PRRDVVSWTAMVDGLAKNGKVDEARR 223
Query: 434 FVMRMPERPNSDVWAALLS 452
MPER N W A+++
Sbjct: 224 LFDCMPER-NIISWNAMIT 241
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 41/223 (18%)
Query: 315 LIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVP 374
LI K G++ ++R++FD + +++V +WT +I GY K G EA ELF ++ VV
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 375 ---------------------------NFVTFLSALSACAHAGLVDKGLEIFQSMENEYK 407
N V++ + + A +G +DK LE+F M
Sbjct: 112 WTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI 171
Query: 408 VKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDV--WAALLSSCRLHGNTEMAKL 465
V + +V L + GR+++A RMP R DV W A++ +G + A+
Sbjct: 172 VS-----WNSMVKALVQRGRIDEAMNLFERMPRR---DVVSWTAMVDGLAKNGKVDEAR- 222
Query: 466 AASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKER 508
LF ++ A+ A + D +L +VM ER
Sbjct: 223 ---RLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPER 262
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 241 bits (616), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 111/301 (36%), Positives = 189/301 (62%), Gaps = 2/301 (0%)
Query: 212 SLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFR 271
SL+ Y N G A +F K +KD+V +N++I G+++ + +L +Y +M +
Sbjct: 28 SLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK-PEEALALYTEMNSKGIK 86
Query: 272 PNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRV 331
P+ T S++ AC+ + A +G++V ++K ++ + L+D+Y++CGRV +++ +
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 146
Query: 332 FDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGL 391
FD M KN SWTS+I G NGF EA+ELF+ M+ G++P +TF+ L AC+H G+
Sbjct: 147 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 206
Query: 392 VDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALL 451
V +G E F+ M EYK++PR+EH+ C+VDLL RAG++ +A+E++ MP +PN +W LL
Sbjct: 207 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 266
Query: 452 SSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGIS 511
+C +HG++++A+ A ++ +L N G YV LSN A+ ++W V ++R+ M G+
Sbjct: 267 GACTVHGDSDLAEFARIQILQLEPN-HSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVK 325
Query: 512 K 512
K
Sbjct: 326 K 326
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 145/323 (44%), Gaps = 49/323 (15%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+TIHS ++++GF + LL LY C + A +VFD + +K L A+N +I + +
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
G+ EE+L L + G K DGFT +L A LG+ VHV ++K V
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALT------LGKRVHVYMIK--V 118
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
+ ++ L D Y + GR+ A+T+FD M +KN +S TSLI G G K+A +F
Sbjct: 119 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 178
Query: 231 QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVA-- 288
+ Y +++E P TF I+ ACS
Sbjct: 179 K----------------YMESTE---------------GLLPCEITFVGILYACSHCGMV 207
Query: 289 --AFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHM-HQKNVFSWTS 345
FE ++++ + P H ++D+ ++ G+V + M Q NV W +
Sbjct: 208 KEGFEYFRRMREEYKIEPRIEHF---GCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRT 264
Query: 346 MIDGYGKNGFPDEALELFQKMQI 368
++ +G D L F ++QI
Sbjct: 265 LLGACTVHG--DSDLAEFARIQI 285
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 103/186 (55%), Gaps = 7/186 (3%)
Query: 287 VAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSM 346
+A +G+ + S ++++ F I + ++L+ +Y+ CG V + +VFD M +K++ +W S+
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 347 IDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEY 406
I+G+ +NG P+EAL L+ +M + G+ P+ T +S LSACA G + G + M +
Sbjct: 61 INGFAENGKPEEALALYTEMNSK-GIKPDGFTIVSLLSACAKIGALTLGKRVHVYM-IKV 118
Query: 407 KVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLA 466
+ + ++DL R GR+ +A M ++ NS W +L+ ++G +
Sbjct: 119 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK-NSVSWTSLIVGLAVNGFGK----E 173
Query: 467 ASELFK 472
A ELFK
Sbjct: 174 AIELFK 179
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 241 bits (615), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 151/479 (31%), Positives = 242/479 (50%), Gaps = 50/479 (10%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ IH +K G + +S L+ +Y KC L A ++FD D+ ++ M+ Y +
Sbjct: 240 GRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQ 299
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
G+ E++ L R+ +G K +T +L A + ++ L + G+ +H +LK
Sbjct: 300 NGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACS-----DICYLEE-GKQLHSFLLKLGF 353
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
E+++ ++T+L+ Y G DA F
Sbjct: 354 ---------------------------------ERHLFATTALVDMYAKAGCLADARKGF 380
Query: 231 QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAF 290
++D+ ++ ++I GY + S+ +L +Y M+ PN T AS++ ACS +A
Sbjct: 381 DCLQERDVALWTSLISGYVQNSD-NEEALILYRRMKTAGIIPNDPTMASVLKACSSLATL 439
Query: 291 EVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGY 350
E+G+QV +K F + +GSAL MYSKCG + D VF K+V SW +MI G
Sbjct: 440 ELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGL 499
Query: 351 GKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKP 410
NG DEALELF++M E G+ P+ VTF++ +SAC+H G V++G F M ++ + P
Sbjct: 500 SHNGQGDEALELFEEMLAE-GMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDP 558
Query: 411 RMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSD----VWAALLSSCRLHGNTEMAKLA 466
+++HYAC+VDLL RAG+L +A EF+ E N D +W LLS+C+ HG E+ A
Sbjct: 559 KVDHYACMVDLLSRAGQLKEAKEFI----ESANIDHGLCLWRILLSACKNHGKCELGVYA 614
Query: 467 ASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWVGADSVY 525
+L L + YV LS A + V + + M+ G+SK+ CSW+ + Y
Sbjct: 615 GEKLMALGSR-ESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQY 672
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 192/437 (43%), Gaps = 66/437 (15%)
Query: 30 PHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQV 89
PH++ L L ++ +G+ +H I++TG + L+ Y KC L A +
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 90 FDDLRDKTLSAYNYMIGAYLKQGQVEES---LGLVRRLLVSGEKLDGFTFSMILKASTST 146
F+ + K + ++N +I Y + G + S + L R + + +T + I KA +S
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSL 131
Query: 147 SGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKN 206
V GR H ++K ++ D YV
Sbjct: 132 QSSTV------GRQAHALVVKM-----------SSFGDIYV------------------- 155
Query: 207 VISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRS-LEVYIDM 265
TSL+ Y GL +D +F +++ ++ M+ GY ATR +E I +
Sbjct: 156 ---DTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGY------ATRGRVEEAIKV 206
Query: 266 QRLNFRPNIS------TFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMY 319
L R F +++ + + +G+Q+ +K G + L +AL+ MY
Sbjct: 207 FNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMY 266
Query: 320 SKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTF 379
SKC + ++ ++FD +N +W++M+ GY +NG EA++LF +M G+ P+ T
Sbjct: 267 SKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRM-FSAGIKPSEYTI 325
Query: 380 LSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHY----ACVVDLLGRAGRLNQAWEFV 435
+ L+AC+ +++G ++ + + +K E + +VD+ +AG L A +
Sbjct: 326 VGVLNACSDICYLEEGKQL-----HSFLLKLGFERHLFATTALVDMYAKAGCLADARKGF 380
Query: 436 MRMPERPNSDVWAALLS 452
+ ER + +W +L+S
Sbjct: 381 DCLQER-DVALWTSLIS 396
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 142/286 (49%), Gaps = 33/286 (11%)
Query: 213 LISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATR--SLEVYIDMQRLNF 270
L++ Y G A IF + KD+V +N++I GYS+ ++ ++++ +M+ +
Sbjct: 55 LVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDI 114
Query: 271 RPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRR 330
PN T A I A S + + VG+Q + ++K FG I + ++L+ MY K G V D +
Sbjct: 115 LPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLK 174
Query: 331 VFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKM--QIEYGVVPNFV--TFLSALSAC 386
VF +M ++N ++W++M+ GY G +EA+++F + E G ++V LS+L+A
Sbjct: 175 VFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAAT 234
Query: 387 AHAGL--------VDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRM 438
+ GL + GL F ++ N +V + + LN+A +
Sbjct: 235 IYVGLGRQIHCITIKNGLLGFVALSN------------ALVTMYSKCESLNEACKMFDSS 282
Query: 439 PERPNSDVWAALLSSCRLHGNTEMAKLAASELFK--LNANGRPGAY 482
+R NS W+A+++ +G + L A +LF +A +P Y
Sbjct: 283 GDR-NSITWSAMVTGYSQNGES----LEAVKLFSRMFSAGIKPSEY 323
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 103/233 (44%), Gaps = 20/233 (8%)
Query: 270 FRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSR 329
P+ ST + S G+ V Q+++T I+ + L++ Y+KCG++ +
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 330 RVFDHMHQKNVFSWTSMIDGYGKNGFPDEA---LELFQKMQIEYGVVPNFVTFLSALSAC 386
+F+ + K+V SW S+I GY +NG + ++LF++M+ + ++PN T A
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQ-DILPNAYTLAGIFKA- 127
Query: 387 AHAGLVDKGLEIFQSMENEYKVKPRMEHYA------CVVDLLGRAGRLNQAWEFVMRMPE 440
+ L+ + + +M + +V + +AG + + MPE
Sbjct: 128 ------ESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPE 181
Query: 441 RPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYV--ALSNTLAA 491
R N+ W+ ++S G E A + + G YV A+ ++LAA
Sbjct: 182 R-NTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAA 233
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 56/122 (45%)
Query: 23 LQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNC 82
++ +P+ +++ L+ + T G+ +H H +K GF I L +Y KC
Sbjct: 414 MKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGS 473
Query: 83 LRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKA 142
L VF +K + ++N MI GQ +E+L L +L G + D TF I+ A
Sbjct: 474 LEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISA 533
Query: 143 ST 144
+
Sbjct: 534 CS 535
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 146/492 (29%), Positives = 254/492 (51%), Gaps = 42/492 (8%)
Query: 28 FVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYAR 87
F+P++ L+ I + +H ILKT +V + + + LL LY + + A
Sbjct: 243 FMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAF 302
Query: 88 QVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTS 147
+VF+++ + +++MI + + G E++ L R+ + + FT S IL +
Sbjct: 303 KVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSIL------N 356
Query: 148 GRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNV 207
G + LG +H ++K D+ D + AL D Y K ++ A +F +S KN
Sbjct: 357 GCAIGKCSGLGEQLHGLVVKVGFDL--DIYVSNALIDVYAKCEKMDTAVKLFAELSSKNE 414
Query: 208 ISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQR 267
+S ++I GY N G A +F++ + + V
Sbjct: 415 VSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEV------------------------ 450
Query: 268 LNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVD 327
TF+S +GAC+ +A+ ++G QV +KT + + ++LIDMY+KCG +
Sbjct: 451 --------TFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKF 502
Query: 328 SRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACA 387
++ VF+ M +V SW ++I GY +G +AL + M+ + PN +TFL LS C+
Sbjct: 503 AQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMK-DRDCKPNGLTFLGVLSGCS 561
Query: 388 HAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVW 447
+AGL+D+G E F+SM ++ ++P +EHY C+V LLGR+G+L++A + + +P P+ +W
Sbjct: 562 NAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIW 621
Query: 448 AALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKE 507
A+LS+ N E A+ +A E+ K+N YV +SN A A++W +V+ +R+ MKE
Sbjct: 622 RAMLSASMNQNNEEFARRSAEEILKINPKDE-ATYVLVSNMYAGAKQWANVASIRKSMKE 680
Query: 508 RGISKDTACSWV 519
G+ K+ SW+
Sbjct: 681 MGVKKEPGLSWI 692
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 195/435 (44%), Gaps = 45/435 (10%)
Query: 24 QNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCL 83
+ H+ PH + ++ L+ +++ D +HS I+K G+ N + L+ Y C +
Sbjct: 140 EGHELNPH--VFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSV 197
Query: 84 RYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKAS 143
AR VF+ + K + + ++ Y++ G E+SL L+ + ++G + +TF LKAS
Sbjct: 198 DSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKAS 257
Query: 144 TSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMS 203
D + VH QILK YV + R+
Sbjct: 258 IGLGAF------DFAKGVHGQILKT----------------CYVLDPRVG---------- 285
Query: 204 EKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYI 263
L+ Y G DA +F + D+V ++ MI + + C +++++I
Sbjct: 286 -------VGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFC-NEAVDLFI 337
Query: 264 DMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCG 323
M+ PN T +SI+ C++ +G+Q+ ++K F I + +ALID+Y+KC
Sbjct: 338 RMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCE 397
Query: 324 RVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSAL 383
++ + ++F + KN SW ++I GY G +A +F++ + V VTF SAL
Sbjct: 398 KMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFRE-ALRNQVSVTEVTFSSAL 456
Query: 384 SACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPN 443
ACA +D G+++ + + ++ ++D+ + G + A M E +
Sbjct: 457 GACASLASMDLGVQV-HGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEM-ETID 514
Query: 444 SDVWAALLSSCRLHG 458
W AL+S HG
Sbjct: 515 VASWNALISGYSTHG 529
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 163/349 (46%), Gaps = 45/349 (12%)
Query: 39 LQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTL 98
L+ I + P S + IH ILK G + + LL Y+K + A +FD++ ++
Sbjct: 56 LRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNN 115
Query: 99 SAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLG 158
++ + Y Q + +GL RL G +L+ F+ LK S + P
Sbjct: 116 VSFVTLAQGYACQ----DPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPW---- 167
Query: 159 RIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYM 218
+H I+K D + + AL ++Y G + ARTVF+ + K+++ ++S Y+
Sbjct: 168 --LHSPIVKLGYD--SNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYV 223
Query: 219 NQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFA 278
G F+D SL++ M+ F PN TF
Sbjct: 224 ENGYFED--------------------------------SLKLLSCMRMAGFMPNNYTFD 251
Query: 279 SIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQK 338
+ + A + AF+ + V Q++KT + ++G L+ +Y++ G + D+ +VF+ M +
Sbjct: 252 TALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKN 311
Query: 339 NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACA 387
+V W+ MI + +NGF +EA++LF +M+ E VVPN T S L+ CA
Sbjct: 312 DVVPWSFMIARFCQNGFCNEAVDLFIRMR-EAFVVPNEFTLSSILNGCA 359
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 142/442 (32%), Positives = 233/442 (52%), Gaps = 41/442 (9%)
Query: 77 YLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTF 136
Y++ L AR+VFD++ D+ L+ +N MI ++ EE L L R + G D +T
Sbjct: 35 YVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTL 94
Query: 137 SMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYAR 196
+ S R+V+ +G+ +H +K ++++
Sbjct: 95 GSVFSGSAGL--RSVS----IGQQIHGYTIKYGLELD----------------------- 125
Query: 197 TVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECAT 256
++ ++SL YM G +D E + + +++V +N +I G ++ C
Sbjct: 126 ----------LVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNG-CPE 174
Query: 257 RSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALI 316
L +Y M+ RPN TF +++ +CS +A GQQ+ ++ +K + + S+LI
Sbjct: 175 TVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLI 234
Query: 317 DMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNF 376
MYSKCG + D+ + F ++ W+SMI YG +G DEA+ELF M + + N
Sbjct: 235 SMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINE 294
Query: 377 VTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVM 436
V FL+ L AC+H+GL DKGLE+F M +Y KP ++HY CVVDLLGRAG L+QA +
Sbjct: 295 VAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIR 354
Query: 437 RMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWD 496
MP + + +W LLS+C +H N EMA+ E+ +++ N YV L+N A+A++W
Sbjct: 355 SMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPND-SACYVLLANVHASAKRWR 413
Query: 497 SVSELREVMKERGISKDTACSW 518
VSE+R+ M+++ + K+ SW
Sbjct: 414 DVSEVRKSMRDKNVKKEAGISW 435
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 138/280 (49%), Gaps = 8/280 (2%)
Query: 186 YVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMI 245
Y K G A V+ M +KN +SS LI+GY+ G +A +F + D+ + +NAMI
Sbjct: 4 YSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMI 63
Query: 246 EGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPF 305
G + E L ++ +M L F P+ T S+ + + + +GQQ+ +K
Sbjct: 64 AGLIQF-EFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGL 122
Query: 306 FGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQK 365
+ + S+L MY + G++ D V M +N+ +W ++I G +NG P+ L L++
Sbjct: 123 ELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKM 182
Query: 366 MQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRA 425
M+I G PN +TF++ LS+C+ + +G +I + + + + ++ + +
Sbjct: 183 MKIS-GCRPNKITFVTVLSSCSDLAIRGQGQQI-HAEAIKIGASSVVAVVSSLISMYSKC 240
Query: 426 GRLNQAWEFVMRMPERPNSD--VWAALLSSCRLHGNTEMA 463
G L A ER + D +W++++S+ HG + A
Sbjct: 241 GCLGDA---AKAFSEREDEDEVMWSSMISAYGFHGQGDEA 277
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/346 (19%), Positives = 142/346 (41%), Gaps = 44/346 (12%)
Query: 28 FVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYAR 87
F P L + + S GQ IH + +K G + ++ L +Y++ L+
Sbjct: 87 FSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGE 146
Query: 88 QVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTS 147
V + + L A+N +I + G E L L + + +SG + + TF +L + + +
Sbjct: 147 IVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLA 206
Query: 148 GRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNV 207
R G+ +H + +K + + V
Sbjct: 207 IRG------QGQQIHAEAIK---------------------------------IGASSVV 227
Query: 208 ISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDM-Q 266
+SLIS Y G DA F + D+D V++++MI Y + ++E++ M +
Sbjct: 228 AVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQ-GDEAIELFNTMAE 286
Query: 267 RLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLM-KTPFFGHIKLGSALIDMYSKCGRV 325
+ N N F +++ ACS + G ++ ++ K F +K + ++D+ + G +
Sbjct: 287 QTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCL 346
Query: 326 VDSRRVFDHMHQK-NVFSWTSMIDGYGKNGFPDEALELFQK-MQIE 369
+ + M K ++ W +++ + + A +F++ +QI+
Sbjct: 347 DQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQID 392
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 145/468 (30%), Positives = 243/468 (51%), Gaps = 41/468 (8%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQ 111
+ IH +I++ + ++ L+ Y KC + A+ +F + + MI YL
Sbjct: 360 KQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHN 419
Query: 112 GQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVD 171
G +SL + R L+ + T IL + LGR +H I+K D
Sbjct: 420 GLYIDSLEMFRWLVKVKISPNEITLVSILPVI------GILLALKLGRELHGFIIKKGFD 473
Query: 172 VEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQ 231
+ ++ C A+ D Y K GR+ A +F+ +S++
Sbjct: 474 -NRCNIGC-AVIDMYAKCGRMNLAYEIFERLSKR-------------------------- 505
Query: 232 KTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFE 291
DIV +N+MI ++ S+ + +++++ M + + ++ + AC+ + +
Sbjct: 506 -----DIVSWNSMITRCAQ-SDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSES 559
Query: 292 VGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYG 351
G+ + ++K + S LIDMY+KCG + + VF M +KN+ SW S+I G
Sbjct: 560 FGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACG 619
Query: 352 KNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPR 411
+G ++L LF +M + G+ P+ +TFL +S+C H G VD+G+ F+SM +Y ++P+
Sbjct: 620 NHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQ 679
Query: 412 MEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELF 471
EHYACVVDL GRAGRL +A+E V MP P++ VW LL +CRLH N E+A++A+S+L
Sbjct: 680 QEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLM 739
Query: 472 KLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
L+ + G YV +SN A A +W+SV+++R +MKER + K SW+
Sbjct: 740 DLDPSNS-GYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWI 786
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 127/537 (23%), Positives = 223/537 (41%), Gaps = 87/537 (16%)
Query: 35 LSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFD--D 92
LS LQ N + G+ +H+ ++ ++ ++L +Y C ++F D
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 93 LRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTS----- 147
LR ++ +N +I ++++ G + ++L ++L G D TF ++KA +
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 148 ---GRNVAPLG-DLGRIVHVQILKA-----DVDV---------EKDDVLCTALTDSYVKN 189
V+ LG D V ++KA +DV +KD V+ + + Y K
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 190 GRIAYARTVFDVMS----EKNVIS-----------------------------------S 210
G + F VM N ++
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIK 277
Query: 211 TSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNF 270
SL+S Y G F DA +F+ D V +N MI GY + S SL + +M
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQ-SGLMEESLTFFYEMISSGV 336
Query: 271 RPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRR 330
P+ TF+S++ + S E +Q+ +M+ I L SALID Y KC V ++
Sbjct: 337 LPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQN 396
Query: 331 VFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACA--- 387
+F + +V +T+MI GY NG ++LE+F+ + ++ + PN +T +S L
Sbjct: 397 IFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWL-VKVKISPNEITLVSILPVIGILL 455
Query: 388 --HAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSD 445
G G I + +N + V+D+ + GR+N A+E R+ +R D
Sbjct: 456 ALKLGRELHGFIIKKGFDNRCNIG------CAVIDMYAKCGRMNLAYEIFERLSKR---D 506
Query: 446 V--WAALLSSCRLHGNTEMAKLAASELFK-LNANGRPGAYVALSNTLAAAEKWDSVS 499
+ W ++++ C N AA ++F+ + +G V++S L+A S S
Sbjct: 507 IVSWNSMITRCAQSDNPS----AAIDIFRQMGVSGICYDCVSISAALSACANLPSES 559
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 125/290 (43%), Gaps = 49/290 (16%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ +H I+K GF NI ++ +Y KC + A ++F+ L + + ++N MI +
Sbjct: 460 GRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQ 519
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
++ + R++ VSG D + S L A + P G+ +H ++K +
Sbjct: 520 SDNPSAAIDIFRQMGVSGICYDCVSISAALSACANL------PSESFGKAIHGFMIKHSL 573
Query: 171 --DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAEC 228
DV + + L D Y K G + A VF M EKN++S S+I+ N G KD+ C
Sbjct: 574 ASDVYSE----STLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLC 629
Query: 229 IFQKTVDKD-------------------------IVVFNAMIEGYSKTSE-----C---- 254
+F + V+K + F +M E Y + C
Sbjct: 630 LFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDL 689
Query: 255 ---ATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLM 301
A R E Y ++ + F P+ + +++GAC + E+ + S+LM
Sbjct: 690 FGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLM 739
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 129/273 (47%), Gaps = 25/273 (9%)
Query: 241 FNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFE----VGQQV 296
+N++I + + ++L Y M P++STF ++ AC + F+ + V
Sbjct: 106 WNSIISSFVRNG-LLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTV 164
Query: 297 QSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFP 356
S M F + S+LI Y + G++ ++FD + QK+ W M++GY K G
Sbjct: 165 SSLGMDCNEF----VASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 357 DEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVD-----KGLEIFQSMENEYKVKPR 411
D ++ F M+++ + PN VTF LS CA L+D GL + ++ E +K
Sbjct: 221 DSVIKGFSVMRMDQ-ISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNS 279
Query: 412 MEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELF 471
+ + + + GR + A + + RM R ++ W ++S + + + + + + +
Sbjct: 280 L------LSMYSKCGRFDDASK-LFRMMSRADTVTWNCMISG---YVQSGLMEESLTFFY 329
Query: 472 KLNANGRPGAYVALSNTLAAAEKWDSVSELREV 504
++ ++G + S+ L + K++++ +++
Sbjct: 330 EMISSGVLPDAITFSSLLPSVSKFENLEYCKQI 362
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 137/463 (29%), Positives = 244/463 (52%), Gaps = 46/463 (9%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G IH + K N + LL LY +C + AR FD ++++ L ++N MI Y
Sbjct: 132 GMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTA 191
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
+ S L + +L G+K D FTF +L+AS + + + L +
Sbjct: 192 NACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEI--------VSELHGLAIKL 243
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
+ L +L ++YVK G +A +A +
Sbjct: 244 GFGRSSALIRSLVNAYVKCGSLA-------------------------------NAWKLH 272
Query: 231 QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAF 290
+ T +D++ A+I G+S+ + C + + +++ DM R+ + + +S++ C+ +A+
Sbjct: 273 EGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASV 332
Query: 291 EVGQQVQSQLMKTPFFG-HIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDG 349
+G+Q+ +K+ + LG++LIDMY+K G + D+ F+ M +K+V SWTS+I G
Sbjct: 333 TIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAG 392
Query: 350 YGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVK 409
YG++G ++A++L+ +M+ E + PN VTFLS LSAC+H G + G +I+ +M N++ ++
Sbjct: 393 YGRHGNFEKAIDLYNRMEHER-IKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIE 451
Query: 410 PRMEHYACVVDLLGRAGRLNQAWEFVMRMPE---RPNSDVWAALLSSCRLHGNTEMAKLA 466
R EH +C++D+L R+G L +A+ + R E +S W A L +CR HGN +++K+A
Sbjct: 452 AREEHLSCIIDMLARSGYLEEAYALI-RSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVA 510
Query: 467 ASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERG 509
A++L + +P Y+ L++ AA WD+ R++MKE G
Sbjct: 511 ATQLLSMEPR-KPVNYINLASVYAANGAWDNALNTRKLMKESG 552
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 188/413 (45%), Gaps = 47/413 (11%)
Query: 54 IHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQ 113
IH + + GF N + L+ LYLK +++AR++FD + + + ++ MI + + G
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 114 VEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVE 173
++L L + + K + FT+ +LK S +++ L + G +H + K +
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLK-----SCKDLGCLKE-GMQIHGSVEKG--NCA 145
Query: 174 KDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKT 233
+ ++ +AL Y + G++ AR FD M E++++S
Sbjct: 146 GNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVS------------------------ 181
Query: 234 VDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVG 293
+NAMI+GY+ + CA S ++ M +P+ TF S++ A +V E+
Sbjct: 182 -------WNAMIDGYTANA-CADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIV 233
Query: 294 QQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYG-K 352
++ +K F L +L++ Y KCG + ++ ++ + ++++ S T++I G+ +
Sbjct: 234 SELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQ 293
Query: 353 NGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRM 412
N +A ++F+ M I + V S L C V G +I +++ +
Sbjct: 294 NNCTSDAFDIFKDM-IRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDV 352
Query: 413 EHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDV--WAALLSSCRLHGNTEMA 463
++D+ ++G + A V+ E DV W +L++ HGN E A
Sbjct: 353 ALGNSLIDMYAKSGEIEDA---VLAFEEMKEKDVRSWTSLIAGYGRHGNFEKA 402
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/335 (39%), Positives = 195/335 (58%), Gaps = 7/335 (2%)
Query: 186 YVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMI 245
Y K RI +F V N L+ Y G + A +F+ +D++ +NAMI
Sbjct: 124 YTKGKRIH--AQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMI 181
Query: 246 EGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPF 305
GY + L +Y DM++ P+ TFAS+ ACS + E G++ + ++K
Sbjct: 182 SGYVQKG-LEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCI 240
Query: 306 FGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQK 365
+I + SAL+DMY KC D RVFD + +NV +WTS+I GYG +G E L+ F+K
Sbjct: 241 KSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEK 300
Query: 366 MQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRA 425
M+ E G PN VTFL L+AC H GLVDKG E F SM+ +Y ++P +HYA +VD LGRA
Sbjct: 301 MK-EEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRA 359
Query: 426 GRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLN-ANGRPGAYVA 484
GRL +A+EFVM+ P + + VW +LL +CR+HGN ++ +LAA++ +L+ NG G YV
Sbjct: 360 GRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNG--GNYVV 417
Query: 485 LSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
+N A+ ++ S++R M+ G+ KD S +
Sbjct: 418 FANGYASCGLREAASKVRRKMENAGVKKDPGYSQI 452
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 158/364 (43%), Gaps = 56/364 (15%)
Query: 49 SSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAY 108
+ G+ IH+ + GF N + +KLL+LY L+ A +F L+ + L +N MI Y
Sbjct: 125 TKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGY 184
Query: 109 LKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKA 168
+++G +E L + + + D +TF+ + +A ++ + G+ H ++K
Sbjct: 185 VQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRL------EHGKRAHAVMIKR 238
Query: 169 DVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAEC 228
++ + ++ +AL D Y K + VFD +S +NVI+ TSLISGY G
Sbjct: 239 --CIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHG------- 289
Query: 229 IFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVA 288
K SE L+ + M+ RPN TF ++ AC+
Sbjct: 290 ---------------------KVSEV----LKCFEKMKEEGCRPNPVTFLVVLTACNHGG 324
Query: 289 AFEVGQQ----VQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRR-VFDHMHQKNVFSW 343
+ G + ++ P H +A++D + GR+ ++ V +++ W
Sbjct: 325 LVDKGWEHFYSMKRDYGIEPEGQHY---AAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVW 381
Query: 344 TSMIDG---YGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQ 400
S++ +G + A F ++ G N+V F + ++C GL + ++ +
Sbjct: 382 GSLLGACRIHGNVKLLELAATKFLELDPTNG--GNYVVFANGYASC---GLREAASKVRR 436
Query: 401 SMEN 404
MEN
Sbjct: 437 KMEN 440
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 81/184 (44%), Gaps = 3/184 (1%)
Query: 276 TFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHM 335
T+A ++ C + G+++ +Q+ F + L L+ +Y+ G + + +F +
Sbjct: 110 TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSL 169
Query: 336 HQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKG 395
+++ W +MI GY + G E L ++ M+ + +VP+ TF S AC+ ++ G
Sbjct: 170 KIRDLIPWNAMISGYVQKGLEQEGLFIYYDMR-QNRIVPDQYTFASVFRACSALDRLEHG 228
Query: 396 LEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCR 455
M +K + + +VD+ + + ++ R N W +L+S
Sbjct: 229 KRAHAVMIKRC-IKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTR-NVITWTSLISGYG 286
Query: 456 LHGN 459
HG
Sbjct: 287 YHGK 290
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 154/498 (30%), Positives = 246/498 (49%), Gaps = 59/498 (11%)
Query: 21 PFLQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKC 80
P L +H F P L + +L Y P +G+ +H+ ++K G T L+ +Y K
Sbjct: 80 PDLSSHTFTP--VLGACSLLSY-----PETGRQVHALMIKQGAETGTISKTALIDMYSKY 132
Query: 81 NCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMIL 140
L + +VF+ + +K L ++N ++ +L+ G+ +E+LG+ + ++ FT S ++
Sbjct: 133 GHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVV 192
Query: 141 KASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFD 200
K S + G+ VH ++ D+
Sbjct: 193 KTCASLK------ILQQGKQVHAMVVVTGRDL---------------------------- 218
Query: 201 VMSEKNVISSTSLISGYMNQGLFKDAECIFQK-TVDKDIVVFNAMIEGYSKTSECATRSL 259
V+ T++IS Y + GL +A ++ V D V+ N++I G +
Sbjct: 219 ------VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYK---- 268
Query: 260 EVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMY 319
E ++ M R RPN+ +S + CS + +G+Q+ ++ F KL + L+DMY
Sbjct: 269 EAFLLMSRQ--RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMY 326
Query: 320 SKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIE-YGVVPNFVT 378
KCG++V +R +F + K+V SWTSMID Y NG +ALE+F++M E GV+PN VT
Sbjct: 327 GKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVT 386
Query: 379 FLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRM 438
FL +SACAHAGLV +G E F M+ +Y++ P EHY C +D+L +AG + W V RM
Sbjct: 387 FLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERM 446
Query: 439 PERPNSD----VWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEK 494
E N +W A+LS+C L+ + + A L + YV +SN AA K
Sbjct: 447 MENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGK 506
Query: 495 WDSVSELREVMKERGISK 512
WD V ELR +K +G+ K
Sbjct: 507 WDVVEELRGKLKNKGLVK 524
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 85/143 (59%), Gaps = 5/143 (3%)
Query: 258 SLEVYIDMQRLNFRPNIS--TFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSAL 315
+L +++ + R + P++S TF ++GACS+++ E G+QV + ++K +AL
Sbjct: 68 TLALFLQIHRAS--PDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTAL 125
Query: 316 IDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPN 375
IDMYSK G +VDS RVF+ + +K++ SW +++ G+ +NG EAL +F M E +
Sbjct: 126 IDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISE 185
Query: 376 FVTFLSALSACAHAGLVDKGLEI 398
F T S + CA ++ +G ++
Sbjct: 186 F-TLSSVVKTCASLKILQQGKQV 207
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 144/519 (27%), Positives = 252/519 (48%), Gaps = 44/519 (8%)
Query: 3 NGILRPFFSSRALFSPHQPFL--QNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILK 60
N ++ F ++ FL + H H L+ + + G +HS ++K
Sbjct: 80 NSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVK 139
Query: 61 TGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGL 120
GF + LL +Y L A ++FD++ D+++ + + Y G+ E++ L
Sbjct: 140 CGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDL 199
Query: 121 VRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCT 180
++++ G K D + +L A VHV D+D
Sbjct: 200 FKKMVEMGVKPDSYFIVQVLSAC-----------------VHV----GDLD--------- 229
Query: 181 ALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVV 240
+ ++ + + ++ +KN T+L++ Y G + A +F V+KDIV
Sbjct: 230 --SGEWI-------VKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVT 280
Query: 241 FNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQL 300
++ MI+GY+ S +E+++ M + N +P+ + + +C+ + A ++G+ S +
Sbjct: 281 WSTMIQGYASNS-FPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLI 339
Query: 301 MKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEAL 360
+ F ++ + +ALIDMY+KCG + VF M +K++ + I G KNG +
Sbjct: 340 DRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSF 399
Query: 361 ELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVD 420
+F + + + G+ P+ TFL L C HAGL+ GL F ++ Y +K +EHY C+VD
Sbjct: 400 AVFGQTE-KLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVD 458
Query: 421 LLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPG 480
L GRAG L+ A+ + MP RPN+ VW ALLS CRL +T++A+ EL L G
Sbjct: 459 LWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEP-WNAG 517
Query: 481 AYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
YV LSN + +WD +E+R++M ++G+ K SW+
Sbjct: 518 NYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWI 556
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 169/358 (47%), Gaps = 42/358 (11%)
Query: 84 RYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKAS 143
+Y+ +F + + YN +I ++ E+L L + G L GFTF ++LKA
Sbjct: 62 KYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKAC 121
Query: 144 TSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMS 203
T S R LG +H ++K + D T+L Y +GR+ A +FD +
Sbjct: 122 TRASSRK------LGIDLHSLVVKCGFN--HDVAAMTSLLSIYSGSGRLNDAHKLFDEIP 173
Query: 204 EKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYI 263
+++V++ T+L SGY G ++A +F+K V+
Sbjct: 174 DRSVVTWTALFSGYTTSGRHREAIDLFKKMVE---------------------------- 205
Query: 264 DMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCG 323
+ +P+ ++ AC V + G+ + + + + + + L+++Y+KCG
Sbjct: 206 ----MGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCG 261
Query: 324 RVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSAL 383
++ +R VFD M +K++ +W++MI GY N FP E +ELF +M ++ + P+ + + L
Sbjct: 262 KMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQM-LQENLKPDQFSIVGFL 320
Query: 384 SACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPER 441
S+CA G +D G E S+ + ++ + ++D+ + G + + +E M E+
Sbjct: 321 SSCASLGALDLG-EWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEK 377
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 128/235 (54%), Gaps = 7/235 (2%)
Query: 211 TSLISGYMNQGLF----KDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQ 266
T L++ + + LF K + +F T +I ++N++I G+ + +L++++ ++
Sbjct: 45 TFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFV-NNHLFHETLDLFLSIR 103
Query: 267 RLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVV 326
+ + TF ++ AC+ ++ ++G + S ++K F + ++L+ +YS GR+
Sbjct: 104 KHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLN 163
Query: 327 DSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSAC 386
D+ ++FD + ++V +WT++ GY +G EA++LF+KM +E GV P+ + LSAC
Sbjct: 164 DAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKM-VEMGVKPDSYFIVQVLSAC 222
Query: 387 AHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPER 441
H G +D G I + ME E +++ +V+L + G++ +A M E+
Sbjct: 223 VHVGDLDSGEWIVKYME-EMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEK 276
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 145/493 (29%), Positives = 258/493 (52%), Gaps = 44/493 (8%)
Query: 29 VPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQ 88
V L++TL+ + G+ +H +K G + + L+ +Y KC ++ AR+
Sbjct: 526 VSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARK 585
Query: 89 VFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSG 148
VF L + ++ + N +I Y Q +EE++ L + +L G TF+ I++A
Sbjct: 586 VFSSLPEWSVVSMNALIAGY-SQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPES 644
Query: 149 RNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVF-DVMSEKNV 207
LG H QI K E + L +L Y+ + + A +F ++ S K++
Sbjct: 645 LT------LGTQFHGQITKRGFSSE-GEYLGISLLGMYMNSRGMTEACALFSELSSPKSI 697
Query: 208 ISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQR 267
+ T ++SG+ G +++A L+ Y +M+
Sbjct: 698 VLWTGMMSGHSQNGFYEEA--------------------------------LKFYKEMRH 725
Query: 268 LNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVD 327
P+ +TF +++ CS++++ G+ + S + + LIDMY+KCG +
Sbjct: 726 DGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKG 785
Query: 328 SRRVFDHMHQK-NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSAC 386
S +VFD M ++ NV SW S+I+GY KNG+ ++AL++F M+ + ++P+ +TFL L+AC
Sbjct: 786 SSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSH-IMPDEITFLGVLTAC 844
Query: 387 AHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDV 446
+HAG V G +IF+ M +Y ++ R++H AC+VDLLGR G L +A +F+ +P++ +
Sbjct: 845 SHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARL 904
Query: 447 WAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMK 506
W++LL +CR+HG+ +++A +L +L AYV LSN A+ W+ + LR+VM+
Sbjct: 905 WSSLLGACRIHGDDIRGEISAEKLIELEPQ-NSSAYVLLSNIYASQGCWEKANALRKVMR 963
Query: 507 ERGISKDTACSWV 519
+RG+ K SW+
Sbjct: 964 DRGVKKVPGYSWI 976
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 137/477 (28%), Positives = 226/477 (47%), Gaps = 53/477 (11%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ +HS L G + ++ LY KC + YA + FD L +K ++A+N M+ Y
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSS 137
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
G+ + L L + + FTFS++L ST NV + GR +H ++K +
Sbjct: 138 IGKPGKVLRSFVSLFENQIFPNKFTFSIVL--STCARETNV----EFGRQIHCSMIK--M 189
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGL-------- 222
+E++ AL D Y K RI+ AR VF+ + + N + T L SGY+ GL
Sbjct: 190 GLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVF 249
Query: 223 ---------------------------FKDAECIFQKTVDKDIVVFNAMIEGYSKTSECA 255
KDA +F + D+V +N MI G+ K C
Sbjct: 250 ERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRG-CE 308
Query: 256 TRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSAL 315
T ++E + +M++ + + ST S++ A +VA ++G V ++ +K +I +GS+L
Sbjct: 309 TVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSL 368
Query: 316 IDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPN 375
+ MYSKC ++ + +VF+ + +KN W +MI GY NG + +ELF M+ + +
Sbjct: 369 VSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDD 428
Query: 376 FVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFV 435
F TF S LS CA + ++ G + F S+ + K+ + +VD+ + G L A +
Sbjct: 429 F-TFTSLLSTCAASHDLEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIF 486
Query: 436 MRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFK-LNANGRPGAYVALSNTLAA 491
RM +R N W ++ S N A +LFK +N G L++TL A
Sbjct: 487 ERMCDRDNV-TWNTIIGSYVQDENES----EAFDLFKRMNLCGIVSDGACLASTLKA 538
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 194/418 (46%), Gaps = 32/418 (7%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ IH ++K G N+ L+ +Y KC+ + AR+VF+ + D + + Y+K
Sbjct: 179 GRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVK 238
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILK------------------ASTSTSGRNVA 152
G EE++ + R+ G + D F ++ +S NV
Sbjct: 239 AGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVM 298
Query: 153 PLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKN----------GRIAYARTVFDVM 202
G R ++ ++ K V T T V + G + +A + +
Sbjct: 299 ISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAI-KLG 357
Query: 203 SEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVY 262
N+ +SL+S Y + A +F+ +K+ V +NAMI GY+ E + + +E++
Sbjct: 358 LASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGE-SHKVMELF 416
Query: 263 IDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKC 322
+DM+ + + TF S++ C+ E+G Q S ++K ++ +G+AL+DMY+KC
Sbjct: 417 MDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKC 476
Query: 323 GRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSA 382
G + D+R++F+ M ++ +W ++I Y ++ EA +LF++M + G+V + S
Sbjct: 477 GALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNL-CGIVSDGACLAST 535
Query: 383 LSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPE 440
L AC H + +G ++ + + + + + ++D+ + G + A + +PE
Sbjct: 536 LKACTHVHGLYQGKQV-HCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPE 592
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 158/336 (47%), Gaps = 42/336 (12%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G +H+ +K G N + L+ +Y KC + A +VF+ L +K +N MI Y
Sbjct: 346 GLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAH 405
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
G+ + + L + SG +D FTF+ +L ST + ++ ++G H I+K +
Sbjct: 406 NGESHKVMELFMDMKSSGYNIDDFTFTSLL--STCAASHDL----EMGSQFHSIIIKKKL 459
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
KN+ +L+ Y G +DA IF
Sbjct: 460 ---------------------------------AKNLFVGNALVDMYAKCGALEDARQIF 486
Query: 231 QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAF 290
++ D+D V +N +I Y + E + + +++ M + + AS + AC+ V
Sbjct: 487 ERMCDRDNVTWNTIIGSYVQ-DENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGL 545
Query: 291 EVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGY 350
G+QV +K + GS+LIDMYSKCG + D+R+VF + + +V S ++I GY
Sbjct: 546 YQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGY 605
Query: 351 GKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSAC 386
+N +EA+ LFQ+M + GV P+ +TF + + AC
Sbjct: 606 SQNNL-EEAVVLFQEM-LTRGVNPSEITFATIVEAC 639
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 158/355 (44%), Gaps = 44/355 (12%)
Query: 157 LGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISG 216
+G+ VH + L +D E L A+ D Y K +++YA FD +
Sbjct: 78 IGKAVHSKSLILGIDSEGR--LGNAIVDLYAKCAQVSYAEKQFDFL-------------- 121
Query: 217 YMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNIST 276
+KD+ +N+M+ YS + + L ++ + PN T
Sbjct: 122 ------------------EKDVTAWNSMLSMYSSIGK-PGKVLRSFVSLFENQIFPNKFT 162
Query: 277 FASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMH 336
F+ ++ C+ E G+Q+ ++K + G AL+DMY+KC R+ D+RRVF+ +
Sbjct: 163 FSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIV 222
Query: 337 QKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGL 396
N WT + GY K G P+EA+ +F++M+ E G P+ + F++ ++ G +
Sbjct: 223 DPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDE-GHRPDHLAFVTVINTYIRLGKLKDAR 281
Query: 397 EIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPE---RPNSDVWAALLSS 453
+F M + P + + ++ G+ G A E+ M + + ++LS+
Sbjct: 282 LLFGEMSS-----PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
Query: 454 CRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKER 508
+ N ++ + +E KL +L + + EK ++ +++ E ++E+
Sbjct: 337 IGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEK 391
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 156/503 (31%), Positives = 250/503 (49%), Gaps = 50/503 (9%)
Query: 54 IHSHILKTGFVPNTNISIKLLVLYLKC-----NCLRYARQVFDDLRDKTLSAYNYMIGAY 108
IH +K G ++ + KL+ L C + L YAR++ + +N ++ Y
Sbjct: 24 IHGLFIKYGVDTDSYFTGKLI---LHCAISISDALPYARRLLLCFPEPDAFMFNTLVRGY 80
Query: 109 LKQGQVEESLGLVRRLLVSGEKL-DGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILK 167
+ + S+ + ++ G D F+F+ ++KA N L G +H Q LK
Sbjct: 81 SESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAV-----ENFRSL-RTGFQMHCQALK 134
Query: 168 ADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAE 227
+ E + T L Y G + +AR VFD M + N+++ ++I+ A
Sbjct: 135 HGL--ESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAR 192
Query: 228 CIFQKTVDKDIVVFNAMIEGYSKTSECAT------------------------------R 257
IF K + ++ +N M+ GY K E +
Sbjct: 193 EIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNE 252
Query: 258 SLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALID 317
S + ++QR PN + ++ ACS +FE G+ + + K + + + +ALID
Sbjct: 253 SFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALID 312
Query: 318 MYSKCGRVVDSRRVFDHMHQKN-VFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNF 376
MYS+CG V +R VF+ M +K + SWTSMI G +G +EA+ LF +M YGV P+
Sbjct: 313 MYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMT-AYGVTPDG 371
Query: 377 VTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVM 436
++F+S L AC+HAGL+++G + F M+ Y ++P +EHY C+VDL GR+G+L +A++F+
Sbjct: 372 ISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFIC 431
Query: 437 RMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWD 496
+MP P + VW LL +C HGN E+A+ L +L+ N G V LSN A A KW
Sbjct: 432 QMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPN-NSGDLVLLSNAYATAGKWK 490
Query: 497 SVSELREVMKERGISKDTACSWV 519
V+ +R+ M + I K TA S V
Sbjct: 491 DVASIRKSMIVQRIKKTTAWSLV 513
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Query: 23 LQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNC 82
LQ P+ L+ L S + G+ +H + K G+ +++ L+ +Y +C
Sbjct: 260 LQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGN 319
Query: 83 LRYARQVFDDLRDK-TLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILK 141
+ AR VF+ +++K + ++ MI GQ EE++ L + G DG +F +L
Sbjct: 320 VPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLH 379
Query: 142 AST 144
A +
Sbjct: 380 ACS 382
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 147/472 (31%), Positives = 242/472 (51%), Gaps = 46/472 (9%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G +H +KTG+ T +S + +Y A +VF+ L +K L +N MI +Y +
Sbjct: 307 GHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQ 366
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
+ ++ + +R+ + G K D FTF +L S D+ +V I+K +
Sbjct: 367 AKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDL---------DVLEMVQACIIKFGL 417
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
+ + + AL +Y KNG+I A +F+ KN+IS ++ISG+ + G +
Sbjct: 418 SSKIE--ISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEG---- 471
Query: 231 QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAF 290
+E +S E R L P+ T ++++ C ++
Sbjct: 472 --------------LERFSCLLESEVRIL------------PDAYTLSTLLSICVSTSSL 505
Query: 291 EVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGY 350
+G Q + +++ F +G+ALI+MYS+CG + +S VF+ M +K+V SW S+I Y
Sbjct: 506 MLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAY 565
Query: 351 GKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKP 410
++G + A+ ++ MQ E V+P+ TF + LSAC+HAGLV++GLEIF SM + V
Sbjct: 566 SRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIR 625
Query: 411 RMEHYACVVDLLGRAGRLNQAWEFVMRMPER---PNSDVWAALLSSCRLHGNTEMAKLAA 467
++H++C+VDLLGRAG L++A E ++++ E+ DVW AL S+C HG+ ++ K+ A
Sbjct: 626 NVDHFSCLVDLLGRAGHLDEA-ESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVA 684
Query: 468 SELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
L + + P YV LSN A A W E R + G K CSW+
Sbjct: 685 KLLMEKEKDD-PSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWM 735
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 195/413 (47%), Gaps = 30/413 (7%)
Query: 46 DTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMI 105
DT GQ +H + +++G + ++++S LL LY + L ++ FD++ + + ++ ++
Sbjct: 72 DTIFGGQ-VHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLL 130
Query: 106 GAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQI 165
A K G +E + + ++ E+ D ++ ++ + + +L R +H
Sbjct: 131 SASFKLGDIEYAFEVFDKM---PERDDVAIWNAMITGCKESGYHETSV--ELFREMH--- 182
Query: 166 LKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTS----LISGYMNQG 221
K V + D A S G + + + V ++ + ++S LI+ Y N
Sbjct: 183 -KLGV---RHDKFGFATILSMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQ 238
Query: 222 LFKDAECIFQKT--VDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFAS 279
+ DA +F++T +D V FN +I+G + SL V+ M + RP TF S
Sbjct: 239 VVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKR--DESLLVFRKMLEASLRPTDLTFVS 296
Query: 280 IIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKN 339
++G+CS A +G QV +KT + + + +A + MYS + +VF+ + +K+
Sbjct: 297 VMGSCSCAA---MGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKD 353
Query: 340 VFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIF 399
+ +W +MI Y + A+ ++++M I GV P+ TF S L+ + LE+
Sbjct: 354 LVTWNTMISSYNQAKLGKSAMSVYKRMHI-IGVKPDEFTFGSLLATSLDLDV----LEMV 408
Query: 400 QSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLS 452
Q+ ++ + ++E ++ + G++ +A + + R N W A++S
Sbjct: 409 QACIIKFGLSSKIEISNALISAYSKNGQIEKA-DLLFERSLRKNLISWNAIIS 460
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 77/163 (47%), Gaps = 6/163 (3%)
Query: 241 FNAMIEGYSKTSECATRSLEVYIDMQRLN-FRPNISTFASIIGACSMVAAFEVGQQVQSQ 299
N + G +++ E +L+++ D+ R RP+ + + I + G QV
Sbjct: 24 LNRRLTGLTRSGE-NRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCY 82
Query: 300 LMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEA 359
+++ H + + L+ +Y + G + ++ FD + + +V+SWT+++ K G + A
Sbjct: 83 AIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYA 142
Query: 360 LELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSM 402
E+F KM + + + ++ C +G + +E+F+ M
Sbjct: 143 FEVFDKMPER----DDVAIWNAMITGCKESGYHETSVELFREM 181
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 63/117 (53%), Gaps = 1/117 (0%)
Query: 29 VPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQ 88
+P + LS L +++ + G H+++L+ G T I L+ +Y +C ++ + +
Sbjct: 486 LPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLE 545
Query: 89 VFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKL-DGFTFSMILKAST 144
VF+ + +K + ++N +I AY + G+ E ++ + + G+ + D TFS +L A +
Sbjct: 546 VFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACS 602
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 145/460 (31%), Positives = 241/460 (52%), Gaps = 44/460 (9%)
Query: 61 TGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGL 120
+GF PN I +L + + R++F + ++SA+N M+ Y EE++
Sbjct: 344 SGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISN 403
Query: 121 VRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCT 180
R++ K D T S+IL S+ R G G+ +H +++ ++
Sbjct: 404 FRQMQFQNLKPDKTTLSVIL----SSCARLRFLEG--GKQIHGVVIRTEIS--------- 448
Query: 181 ALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDK-DIV 239
KN I + LI+ Y + +ECIF +++ DI
Sbjct: 449 -------KNSHIV-----------------SGLIAVYSECEKMEISECIFDDCINELDIA 484
Query: 240 VFNAMIEGYSKTSECATRSLEVYIDM-QRLNFRPNISTFASIIGACSMVAAFEVGQQVQS 298
+N+MI G+ + + T++L ++ M Q PN ++FA+++ +CS + + G+Q
Sbjct: 485 CWNSMISGF-RHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHG 543
Query: 299 QLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDE 358
++K+ + + +AL DMY KCG + +R+ FD + +KN W MI GYG NG DE
Sbjct: 544 LVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDE 603
Query: 359 ALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACV 418
A+ L++KM I G P+ +TF+S L+AC+H+GLV+ GLEI SM+ + ++P ++HY C+
Sbjct: 604 AVGLYRKM-ISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICI 662
Query: 419 VDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGR 478
VD LGRAGRL A + P + +S +W LLSSCR+HG+ +A+ A +L +L+
Sbjct: 663 VDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQS- 721
Query: 479 PGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSW 518
AYV LSNT ++ +WD + L+ +M + + K SW
Sbjct: 722 SAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSW 761
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 114/487 (23%), Positives = 206/487 (42%), Gaps = 47/487 (9%)
Query: 5 ILRPFFSSRALFSPHQPFLQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFV 64
++R F +AL + F+P L++ L G H +KTG
Sbjct: 113 LVRKGFEEKALVVYKRMVCDG--FLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLD 170
Query: 65 PNTNISIKLLVLYLKCN-CLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRR 123
N + LL +Y KC + Y +VF+ L +Y +IG ++ +V E++ + R
Sbjct: 171 KNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRL 230
Query: 124 LLVSGEKLDGFTFSMILKASTSTSGRNVAPL---GDLGRIVHVQILKADVDVEKDDVLCT 180
+ G ++D S IL S G + +LG+ +H L+ + D L
Sbjct: 231 MCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALR--LGFGGDLHLNN 288
Query: 181 ALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGY---------------MNQGLFKD 225
+L + Y KN + A +F M E NV+S +I G+ M F+
Sbjct: 289 SLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQP 348
Query: 226 AEC--------------------IFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDM 265
E IF + +NAM+ GYS E ++ + M
Sbjct: 349 NEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNY-EHYEEAISNFRQM 407
Query: 266 QRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRV 325
Q N +P+ +T + I+ +C+ + E G+Q+ +++T + + S LI +YS+C ++
Sbjct: 408 QFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKM 467
Query: 326 VDSRRVFDH-MHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALS 384
S +FD +++ ++ W SMI G+ N +AL LF++M + PN +F + LS
Sbjct: 468 EISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLS 527
Query: 385 ACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNS 444
+C+ + G + + V A + D+ + G ++ A +F + R N+
Sbjct: 528 SCSRLCSLLHGRQFHGLVVKSGYVSDSFVETA-LTDMYCKCGEIDSARQFFDAVL-RKNT 585
Query: 445 DVWAALL 451
+W ++
Sbjct: 586 VIWNEMI 592
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 182/400 (45%), Gaps = 64/400 (16%)
Query: 35 LSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDL- 93
L++ L+ Y + SG+ IH I++ G +T + +LL LY++C YAR+VFD++
Sbjct: 9 LASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMS 68
Query: 94 -RD-----------------------------KTLSAYNYMIGAYLKQGQVEESLGLVRR 123
RD + + ++N MI +++G E++L + +R
Sbjct: 69 VRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKR 128
Query: 124 LLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALT 183
++ G FT + +L A + G G H +K +D K+ + AL
Sbjct: 129 MVCDGFLPSRFTLASVLSACSKVLD------GVFGMRCHGVAVKTGLD--KNIFVGNALL 180
Query: 184 DSYVKNGRIA-YARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFN 242
Y K G I Y VF+ +S+ N +S T++I G + +A +F+ +K + V
Sbjct: 181 SMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQV-- 238
Query: 243 AMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMK 302
S C + L + R + + I G E+G+Q+ ++
Sbjct: 239 --------DSVCLSNILSISAP------REGCDSLSEIYGN-------ELGKQIHCLALR 277
Query: 303 TPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALEL 362
F G + L ++L+++Y+K + + +F M + NV SW MI G+G+ D+++E
Sbjct: 278 LGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEF 337
Query: 363 FQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSM 402
+M+ + G PN VT +S L AC +G V+ G IF S+
Sbjct: 338 LTRMR-DSGFQPNEVTCISVLGACFRSGDVETGRRIFSSI 376
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 138/320 (43%), Gaps = 19/320 (5%)
Query: 23 LQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNC 82
+Q + P T LS L G+ IH +++T N++I L+ +Y +C
Sbjct: 407 MQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEK 466
Query: 83 LRYARQVFDD-LRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFT-FSMIL 140
+ + +FDD + + ++ +N MI + ++L L RR+ + T F+ +L
Sbjct: 467 MEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVL 526
Query: 141 KASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFD 200
S+ R + L GR H ++K+ D + TALTD Y K G I AR FD
Sbjct: 527 ----SSCSRLCSLLH--GRQFHGLVVKSGY--VSDSFVETALTDMYCKCGEIDSARQFFD 578
Query: 201 VMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDK----DIVVFNAMIEGYSKTSECAT 256
+ KN + +I GY + G +A +++K + D + F +++ S + T
Sbjct: 579 AVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVET 638
Query: 257 RSLEVYIDMQRLN-FRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSAL 315
LE+ MQR++ P + + I+ E +++ TP+ L L
Sbjct: 639 -GLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAE---ATPYKSSSVLWEIL 694
Query: 316 IDMYSKCGRVVDSRRVFDHM 335
+ G V +RRV + +
Sbjct: 695 LSSCRVHGDVSLARRVAEKL 714
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 141/470 (30%), Positives = 248/470 (52%), Gaps = 48/470 (10%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLR-DKTLSAYNYMIGAYLK 110
+ +H ++K GF+ + NI L+V Y KC + A ++F ++ + ++ MI +L+
Sbjct: 315 EQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQ 374
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
EE++ L + G + + FT+S+IL A S V H Q++K
Sbjct: 375 NDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEV----------HAQVVK--T 422
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
+ E+ + TAL D+YVK G++ ++A +F
Sbjct: 423 NYERSSTVGTALLDAYVKLGKV-------------------------------EEAAKVF 451
Query: 231 QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMV-AA 289
DKDIV ++AM+ GY++T E +++++ ++ + +PN TF+SI+ C+ A+
Sbjct: 452 SGIDDKDIVAWSAMLAGYAQTGETEA-AIKMFGELTKGGIKPNEFTFSSILNVCAATNAS 510
Query: 290 FEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDG 349
G+Q +K+ + + SAL+ MY+K G + + VF +K++ SW SMI G
Sbjct: 511 MGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISG 570
Query: 350 YGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVK 409
Y ++G +AL++F++M+ + V + VTF+ +AC HAGLV++G + F M + K+
Sbjct: 571 YAQHGQAMKALDVFKEMK-KRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIA 629
Query: 410 PRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASE 469
P EH +C+VDL RAG+L +A + + MP S +W +L++CR+H TE+ +LAA +
Sbjct: 630 PTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEK 689
Query: 470 LFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
+ + AYV LSN A + W +++R++M ER + K+ SW+
Sbjct: 690 IIAMKPED-SAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWI 738
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 206/450 (45%), Gaps = 64/450 (14%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ +H +K GF+ + ++ L+ Y+K + + R+VFD+++++ + + +I Y +
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILK--ASTSTSGRNVAPLGDLGRIVHVQILKA 168
+E L L R+ G + + FTF+ L A GR G VH ++K
Sbjct: 172 NSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGR--------GLQVHTVVVKN 223
Query: 169 DVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAEC 228
+D K + +L + Y+K G + AR +FD K+V++ S+ISGY GL +A
Sbjct: 224 GLD--KTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALG 281
Query: 229 IFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNF-RPNISTFASIIGACSMV 287
+F YS RLN+ R + S+FAS+I C+ +
Sbjct: 282 MF-----------------YS----------------MRLNYVRLSESSFASVIKLCANL 308
Query: 288 AAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMH-QKNVFSWTSM 346
+Q+ ++K F + +AL+ YSKC ++D+ R+F + NV SWT+M
Sbjct: 309 KELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAM 368
Query: 347 IDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEY 406
I G+ +N +EA++LF +M+ GV PN T+ L+A L + E
Sbjct: 369 ISGFLQNDGKEEAVDLFSEMK-RKGVRPNEFTYSVILTA----------LPVISPSEVHA 417
Query: 407 K-VKPRMEHYACV----VDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTE 461
+ VK E + V +D + G++ +A + + ++ + W+A+L+ G TE
Sbjct: 418 QVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDK-DIVAWSAMLAGYAQTGETE 476
Query: 462 MAKLAASELFKLNANGRPGAYVALSNTLAA 491
A EL K + ++ N AA
Sbjct: 477 AAIKMFGELTKGGIKPNEFTFSSILNVCAA 506
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 100/183 (54%), Gaps = 2/183 (1%)
Query: 216 GYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNIS 275
G ++ +A +F K+ +D + +++ G+S+ + +++++ RL + S
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGR-TQEAKRLFLNIHRLGMEMDCS 94
Query: 276 TFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHM 335
F+S++ + + G+Q+ Q +K F + +G++L+D Y K D R+VFD M
Sbjct: 95 IFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEM 154
Query: 336 HQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKG 395
++NV +WT++I GY +N DE L LF +MQ E G PN TF +AL A G+ +G
Sbjct: 155 KERNVVTWTTLISGYARNSMNDEVLTLFMRMQNE-GTQPNSFTFAAALGVLAEEGVGGRG 213
Query: 396 LEI 398
L++
Sbjct: 214 LQV 216
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 68/152 (44%), Gaps = 7/152 (4%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ H +K+ + +S LL +Y K + A +VF R+K L ++N MI Y +
Sbjct: 514 GKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQ 573
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
GQ ++L + + + K+DG TF + A T A L + G + I+ D
Sbjct: 574 HGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTH------AGLVEEGE-KYFDIMVRDC 626
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVM 202
+ + + D Y + G++ A V + M
Sbjct: 627 KIAPTKEHNSCMVDLYSRAGQLEKAMKVIENM 658
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 147/473 (31%), Positives = 242/473 (51%), Gaps = 43/473 (9%)
Query: 50 SGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYL 109
+G +H++++K G+ N + L+ +Y KCN Y + F + DK L ++ +I Y
Sbjct: 404 AGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYA 463
Query: 110 KQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKAD 169
+ E+L L R + ++D IL+AS+ + + +H IL+
Sbjct: 464 QNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIV------KEIHCHILRKG 517
Query: 170 VDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECI 229
+ D V+ L D Y K + YA VF+ + K+V+S TS+IS G +A +
Sbjct: 518 L---LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVEL 574
Query: 230 FQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAA 289
F++ V+ G S S I+ A + ++A
Sbjct: 575 FRRMVET----------GLSADS----------------------VALLCILSAAASLSA 602
Query: 290 FEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDG 349
G+++ L++ F + A++DMY+ CG + ++ VFD + +K + +TSMI+
Sbjct: 603 LNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINA 662
Query: 350 YGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVK 409
YG +G A+ELF KM+ E V P+ ++FL+ L AC+HAGL+D+G + ME+EY+++
Sbjct: 663 YGMHGCGKAAVELFDKMRHE-NVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELE 721
Query: 410 PRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASE 469
P EHY C+VD+LGRA + +A+EFV M P ++VW ALL++CR H E+ ++AA
Sbjct: 722 PWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQR 781
Query: 470 LFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWVGAD 522
L +L PG V +SN A +W+ V ++R MK G+ K CSW+ D
Sbjct: 782 LLELEPKN-PGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMD 833
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 165/354 (46%), Gaps = 46/354 (12%)
Query: 49 SSGQTIHSHILKTGFVPNTNISI---KLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMI 105
S G+ +HS I KT P+ + KL+ +Y KC L A +VFD++ D+T A+N MI
Sbjct: 97 SQGRQLHSRIFKT--FPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMI 154
Query: 106 GAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQI 165
GAY+ G+ +L L + V G L +F +LKA A L D+ +
Sbjct: 155 GAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKA--------CAKLRDIRSGSELHS 206
Query: 166 LKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKD 225
L + + AL Y KN ++ AR +FD EK
Sbjct: 207 LLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKG------------------- 247
Query: 226 AECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACS 285
D V++N+++ YS TS + +LE++ +M PN T S + AC
Sbjct: 248 -----------DAVLWNSILSSYS-TSGKSLETLELFREMHMTGPAPNSYTIVSALTACD 295
Query: 286 MVAAFEVGQQVQSQLMKTPFF-GHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWT 344
+ ++G+++ + ++K+ + + +ALI MY++CG++ + R+ M+ +V +W
Sbjct: 296 GFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWN 355
Query: 345 SMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEI 398
S+I GY +N EALE F M I G + V+ S ++A + G+E+
Sbjct: 356 SLIKGYVQNLMYKEALEFFSDM-IAAGHKSDEVSMTSIIAASGRLSNLLAGMEL 408
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 205/434 (47%), Gaps = 68/434 (15%)
Query: 50 SGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSA-YNYMIGAY 108
SG +HS ++K G+ I L+ +Y K + L AR++FD ++K + +N ++ +Y
Sbjct: 200 SGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSY 259
Query: 109 LKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKA 168
G+ E+L L R + ++G + +T I+ A T+ G + A LG+ +H +LK+
Sbjct: 260 STSGKSLETLELFREMHMTGPAPNSYT---IVSALTACDGFSYA---KLGKEIHASVLKS 313
Query: 169 DVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAEC 228
T ++ YV N +LI+ Y G AE
Sbjct: 314 S----------THSSELYVCN----------------------ALIAMYTRCGKMPQAER 341
Query: 229 IFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVA 288
I ++ + D+V +N++I+GY + +LE + DM + + + SII A ++
Sbjct: 342 ILRQMNNADVVTWNSLIKGYVQNL-MYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLS 400
Query: 289 AFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMID 348
G ++ + ++K + ++++G+ LIDMYSKC R F MH K++ SWT++I
Sbjct: 401 NLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIA 460
Query: 349 GYGKNGFPDEALELF-----QKMQIEYGVVPNFVTFLSALSAC-----AHAGLVDKGLEI 398
GY +N EALELF ++M+I+ ++ + + S L + H ++ KGL +
Sbjct: 461 GYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-L 519
Query: 399 FQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHG 458
++NE +VD+ G+ + A V + + W +++SS L+G
Sbjct: 520 DTVIQNE------------LVDVYGKCRNMGYATR-VFESIKGKDVVSWTSMISSSALNG 566
Query: 459 NTEMAKLAASELFK 472
N A ELF+
Sbjct: 567 NES----EAVELFR 576
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 143/309 (46%), Gaps = 11/309 (3%)
Query: 187 VKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIE 246
V GR ++R S + + L+ Y G DAE +F + D+ +N MI
Sbjct: 96 VSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIG 155
Query: 247 GYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFF 306
Y E A+ +L +Y +M+ +S+F +++ AC+ + G ++ S L+K +
Sbjct: 156 AYVSNGEPAS-ALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYH 214
Query: 307 GHIKLGSALIDMYSKCGRVVDSRRVFDHMHQK-NVFSWTSMIDGYGKNGFPDEALELFQK 365
+ +AL+ MY+K + +RR+FD +K + W S++ Y +G E LELF++
Sbjct: 215 STGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFRE 274
Query: 366 MQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYAC--VVDLLG 423
M + G PN T +SAL+AC G EI S+ E Y C ++ +
Sbjct: 275 MHMT-GPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSS--ELYVCNALIAMYT 331
Query: 424 RAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYV 483
R G++ QA E ++R + W +L+ + M K A + A G V
Sbjct: 332 RCGKMPQA-ERILRQMNNADVVTWNSLIKG---YVQNLMYKEALEFFSDMIAAGHKSDEV 387
Query: 484 ALSNTLAAA 492
++++ +AA+
Sbjct: 388 SMTSIIAAS 396
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 110/233 (47%), Gaps = 24/233 (10%)
Query: 266 QRLNFRPN---ISTFASIIGACSMVAAFEVGQQVQSQLMKT-PFFGHIKLGSALIDMYSK 321
QRL+ N + FA ++ C A G+Q+ S++ KT P F L L+ MY K
Sbjct: 69 QRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGK 128
Query: 322 CGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLS 381
CG + D+ +VFD M + F+W +MI Y NG P AL L+ M++E GV +F +
Sbjct: 129 CGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVE-GVPLGLSSFPA 187
Query: 382 ALSACAHAGLVDKGLEIFQSM------ENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFV 435
L ACA + G E+ + + V + YA D L A RL ++
Sbjct: 188 LLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYA-KNDDLSAARRLFDGFQ-- 244
Query: 436 MRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFK-LNANG-RPGAYVALS 486
E+ ++ +W ++LSS G + L ELF+ ++ G P +Y +S
Sbjct: 245 ----EKGDAVLWNSILSSYSTSGKS----LETLELFREMHMTGPAPNSYTIVS 289
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 235 bits (600), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 145/505 (28%), Positives = 262/505 (51%), Gaps = 25/505 (4%)
Query: 28 FVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYAR 87
+P+S L+ S GQ IH H+LK G + + L+ +Y++ L A
Sbjct: 130 LLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAH 189
Query: 88 QVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTS 147
+VFD + + +Y +I Y +G +E + L + V D +++ ++ T
Sbjct: 190 KVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK----DVVSWNAMISGYAETG 245
Query: 148 GRNVAPLGDLGRIVHVQILK--ADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEK 205
A +++ K +V D+ + + ++G I R V + +
Sbjct: 246 NYKEA----------LELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDH 295
Query: 206 ----NVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEV 261
N+ +LI Y G + A +F++ KD++ +N +I GY+ + +L +
Sbjct: 296 GFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMN-LYKEALLL 354
Query: 262 YIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMK--TPFFGHIKLGSALIDMY 319
+ +M R PN T SI+ AC+ + A ++G+ + + K L ++LIDMY
Sbjct: 355 FQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMY 414
Query: 320 SKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTF 379
+KCG + + +VF+ + K++ SW +MI G+ +G D + +LF +M+ + G+ P+ +TF
Sbjct: 415 AKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMR-KIGIQPDDITF 473
Query: 380 LSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMP 439
+ LSAC+H+G++D G IF++M +YK+ P++EHY C++DLLG +G +A E + M
Sbjct: 474 VGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMME 533
Query: 440 ERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVS 499
P+ +W +LL +C++HGN E+ + A L K+ PG+YV LSN A+A +W+ V+
Sbjct: 534 MEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPE-NPGSYVLLSNIYASAGRWNEVA 592
Query: 500 ELREVMKERGISKDTACSWVGADSV 524
+ R ++ ++G+ K CS + DSV
Sbjct: 593 KTRALLNDKGMKKVPGCSSIEIDSV 617
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 135/446 (30%), Positives = 229/446 (51%), Gaps = 18/446 (4%)
Query: 22 FLQNHDFVPHSTLLSN-TLQYYINSDTPSSGQTIHSHILKTGFVPNTNIS----IKLLVL 76
FL + P+ ++ ++ +L N T S + IH+ ++K G + NTN + I+ +L
Sbjct: 19 FLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIG-LHNTNYALSKLIEFCIL 77
Query: 77 YLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTF 136
L YA VF +++ L +N M + +L L ++ G + +TF
Sbjct: 78 SPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTF 137
Query: 137 SMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYAR 196
+LK+ + G+ +H +LK D+ D + T+L YV+NGR+ A
Sbjct: 138 PFVLKSCAKSKAFKE------GQQIHGHVLKLGCDL--DLYVHTSLISMYVQNGRLEDAH 189
Query: 197 TVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECAT 256
VFD ++V+S T+LI GY ++G ++A+ +F + KD+V +NAMI GY++T
Sbjct: 190 KVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGN-YK 248
Query: 257 RSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALI 316
+LE++ DM + N RP+ ST +++ AC+ + E+G+QV + F ++K+ +ALI
Sbjct: 249 EALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALI 308
Query: 317 DMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNF 376
D+YSKCG + + +F+ + K+V SW ++I GY EAL LFQ+M + G PN
Sbjct: 309 DLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEM-LRSGETPND 367
Query: 377 VTFLSALSACAHAGLVDKGLEIFQSMENEYK-VKPRMEHYACVVDLLGRAGRLNQAWEFV 435
VT LS L ACAH G +D G I ++ K V ++D+ + G + A +
Sbjct: 368 VTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVF 427
Query: 436 MRMPERPNSDVWAALLSSCRLHGNTE 461
+ + S W A++ +HG +
Sbjct: 428 NSILHKSLSS-WNAMIFGFAMHGRAD 452
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 235 bits (599), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 148/433 (34%), Positives = 221/433 (51%), Gaps = 46/433 (10%)
Query: 83 LRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKA 142
L +AR + D T S +N + Y ES+ + + G K + TF +LKA
Sbjct: 63 LAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKA 122
Query: 143 STSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVM 202
S G GR + V++LK D D + L Y + + AR VFD M
Sbjct: 123 CASFLGLTA------GRQIQVEVLKHGFDF--DVYVGNNLIHLYGTCKKTSDARKVFDEM 174
Query: 203 SEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVY 262
+E+NV+S S+++ + G K +VF E +
Sbjct: 175 TERNVVSWNSIMTALVENG--------------KLNLVF------------------ECF 202
Query: 263 IDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKC 322
+M F P+ +T ++ AC +G+ V SQ+M + +LG+AL+DMY+K
Sbjct: 203 CEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKS 260
Query: 323 GRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSA 382
G + +R VF+ M KNV++W++MI G + GF +EAL+LF KM E V PN+VTFL
Sbjct: 261 GGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGV 320
Query: 383 LSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERP 442
L AC+H GLVD G + F ME +K+KP M HY +VD+LGRAGRLN+A++F+ +MP P
Sbjct: 321 LCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEP 380
Query: 443 NSDVWAALLSSCRLHGNTE---MAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVS 499
++ VW LLS+C +H + + + + L +L R G V ++N A A W +
Sbjct: 381 DAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPK-RSGNLVIVANRFAEARMWAEAA 439
Query: 500 ELREVMKERGISK 512
E+R VMKE + K
Sbjct: 440 EVRRVMKETKMKK 452
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 149/317 (47%), Gaps = 16/317 (5%)
Query: 178 LCTALTDSYVKNGRIAYARTVFD--VMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVD 235
LC+++ +G+I + D ++SE +SS SL A + + D
Sbjct: 22 LCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKD------LAFARTLLLHSSD 75
Query: 236 KDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQ 295
+N + GYS +S+ S+ VY +M+R +PN TF ++ AC+ G+Q
Sbjct: 76 STPSTWNMLSRGYS-SSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQ 134
Query: 296 VQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGF 355
+Q +++K F + +G+ LI +Y C + D+R+VFD M ++NV SW S++ +NG
Sbjct: 135 IQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGK 194
Query: 356 PDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHY 415
+ E F +M I P+ T + LSAC L L Q M E ++ R+
Sbjct: 195 LNLVFECFCEM-IGKRFCPDETTMVVLLSACG-GNLSLGKLVHSQVMVRELELNCRLG-- 250
Query: 416 ACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNA 475
+VD+ ++G L A RM ++ N W+A++ +G E A S++ K +
Sbjct: 251 TALVDMYAKSGGLEYARLVFERMVDK-NVWTWSAMIVGLAQYGFAEEALQLFSKMMK-ES 308
Query: 476 NGRPGAYVALSNTLAAA 492
+ RP YV L A
Sbjct: 309 SVRPN-YVTFLGVLCAC 324
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 181/430 (42%), Gaps = 97/430 (22%)
Query: 49 SSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAY 108
++G+ I +LK GF + + L+ LY C AR+VFD++ ++ + ++N ++ A
Sbjct: 130 TAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTAL 189
Query: 109 LKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKA 168
++ G++ ++ D T ++L S G N++ LG++VH Q++
Sbjct: 190 VENGKLNLVFECFCEMIGKRFCPDETTMVVLL----SACGGNLS----LGKLVHSQVMVR 241
Query: 169 DVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAEC 228
++++ + L TAL D Y K+G + YAR VF+ M +KNV + +++I G G ++A
Sbjct: 242 ELEL--NCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQ 299
Query: 229 IFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVA 288
+F K M+ + RPN TF ++ ACS
Sbjct: 300 LFSKM-------------------------------MKESSVRPNYVTFLGVLCACSHTG 328
Query: 289 AFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMID 348
+ G + ++ K H + + + +M+D
Sbjct: 329 LVDDGYKYFHEMEKI------------------------------HKIKPMMIHYGAMVD 358
Query: 349 GYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACA-HAGLVDKGLEIFQSMENEYK 407
G+ G +EA + +KM E P+ V + + LSAC+ H D+G+ K
Sbjct: 359 ILGRAGRLNEAYDFIKKMPFE----PDAVVWRTLLSACSIHHDEDDEGI--------GEK 406
Query: 408 VKPRMEHYACVVDL-LGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLA 466
VK R+ ++L R+G L V+ + +WA R+ T+M K+A
Sbjct: 407 VKKRL------IELEPKRSGNL------VIVANRFAEARMWAEAAEVRRVMKETKMKKIA 454
Query: 467 ASELFKLNAN 476
+L +
Sbjct: 455 GESCLELGGS 464
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 136/471 (28%), Positives = 255/471 (54%), Gaps = 46/471 (9%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQ 111
+ +H ++K+ + I +L+ YL+ A ++FD++ ++ L ++N +I Y +
Sbjct: 51 RLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGR 110
Query: 112 GQVEESLGLVRRLLVS--GEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKAD 169
G + + ++ R+++S G + + TF ++ A + + GR +H ++K
Sbjct: 111 GYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSK------EEGRCIHGLVMKFG 164
Query: 170 VDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECI 229
V +E+ V+ A + Y K G + + +F+ +S KN++S ++I ++ GL
Sbjct: 165 V-LEEVKVV-NAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGL------- 215
Query: 230 FQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAA 289
+K + FN +R+ P+ +TF +++ +C +
Sbjct: 216 ----AEKGLAYFNM---------------------SRRVGHEPDQATFLAVLRSCEDMGV 250
Query: 290 FEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDG 349
+ Q + +M F G+ + +AL+D+YSK GR+ DS VF + + +WT+M+
Sbjct: 251 VRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAA 310
Query: 350 YGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVK 409
Y +GF +A++ F+ M + YG+ P+ VTF L+AC+H+GLV++G F++M Y++
Sbjct: 311 YATHGFGRDAIKHFELM-VHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRID 369
Query: 410 PRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASE 469
PR++HY+C+VDLLGR+G L A+ + MP P+S VW ALL +CR++ +T++ AA
Sbjct: 370 PRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAER 429
Query: 470 LFKLNA-NGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
LF+L +GR YV LSN +A+ W S +R +MK++G+ + + CS++
Sbjct: 430 LFELEPRDGRN--YVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYI 478
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 69/122 (56%), Gaps = 1/122 (0%)
Query: 275 STFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDH 334
+ +S+I A + E+ + + +++K+ + H +G L+ Y + G V + ++FD
Sbjct: 32 ANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDE 91
Query: 335 MHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQI-EYGVVPNFVTFLSALSACAHAGLVD 393
M ++++ SW S+I GY G+ + E+ +M I E G PN VTFLS +SAC + G +
Sbjct: 92 MPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKE 151
Query: 394 KG 395
+G
Sbjct: 152 EG 153
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 143/350 (40%), Gaps = 47/350 (13%)
Query: 28 FVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYAR 87
F P+ + + + + G+ IH ++K G + + + Y K L +
Sbjct: 130 FRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSC 189
Query: 88 QVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTS 147
++F+DL K L ++N MI +L+ G E+ L G + D TF +L++
Sbjct: 190 KLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMG 249
Query: 148 GRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNV 207
+ L + +H I+ K + TAL D Y K GR+ + TVF ++ +
Sbjct: 250 ------VVRLAQGIHGLIMFGGFSGNK--CITTALLDLYSKLGRLEDSSTVFHEITSPDS 301
Query: 208 ISSTSLISGYMNQGLFKDA----ECIFQKTVDKDIVVFNAMI----------EG------ 247
++ T++++ Y G +DA E + + D V F ++ EG
Sbjct: 302 MAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFET 361
Query: 248 -------------YSKTSECATRS---LEVYIDMQRLNFRPNISTFASIIGACSMVAAFE 291
YS + RS + Y ++ + P+ + +++GAC + +
Sbjct: 362 MSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQ 421
Query: 292 VGQQVQSQLMK-TPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNV 340
+G + +L + P G + L ++YS G D+ R+ + M QK +
Sbjct: 422 LGTKAAERLFELEPRDGRNYV--MLSNIYSASGLWKDASRIRNLMKQKGL 469
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 141/474 (29%), Positives = 253/474 (53%), Gaps = 42/474 (8%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G TIHS+ +K G +S KL+ LY + LR ++VFD + + L ++N +I AY
Sbjct: 266 GVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYEL 325
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
Q ++ L + + +S + D T +I AS ++ LGD+
Sbjct: 326 NEQPLRAISLFQEMRLSRIQPDCLT--LISLASI------LSQLGDIRA----------- 366
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
C ++ ++ G +++ +++ Y GL A +F
Sbjct: 367 --------CRSVQGFTLRKGWFL-----------EDITIGNAVVVMYAKLGLVDSARAVF 407
Query: 231 QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLN-FRPNISTFASIIGACSMVAA 289
+ D++ +N +I GY++ A+ ++E+Y M+ N T+ S++ ACS A
Sbjct: 408 NWLPNTDVISWNTIISGYAQNG-FASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGA 466
Query: 290 FEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDG 349
G ++ +L+K + + + ++L DMY KCGR+ D+ +F + + N W ++I
Sbjct: 467 LRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIAC 526
Query: 350 YGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVK 409
+G +G ++A+ LF++M ++ GV P+ +TF++ LSAC+H+GLVD+G F+ M+ +Y +
Sbjct: 527 HGFHGHGEKAVMLFKEM-LDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGIT 585
Query: 410 PRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASE 469
P ++HY C+VD+ GRAG+L A +F+ M +P++ +W ALLS+CR+HGN ++ K+A+
Sbjct: 586 PSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEH 645
Query: 470 LFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWVGADS 523
LF++ G +V LSN A+A KW+ V E+R + +G+ K S + D+
Sbjct: 646 LFEVEPE-HVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDN 698
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 195/427 (45%), Gaps = 49/427 (11%)
Query: 47 TPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIG 106
T G IH LK GF+ + ++ L+ LY + + AR +FD++ + + ++N MI
Sbjct: 165 TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMIS 224
Query: 107 AYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQIL 166
Y + G +E+L L L +D T +L A T GD R V +
Sbjct: 225 GYCQSGNAKEALTLSNGL----RAMDSVTVVSLLSACTEA--------GDFNRGVTIHSY 272
Query: 167 KADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDA 226
+E + + L D Y + GR+ + VFD M +++IS S+I Y
Sbjct: 273 SIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAY--------- 323
Query: 227 ECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSM 286
+ +E R++ ++ +M+ +P+ T S+ S
Sbjct: 324 -----------------------ELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQ 360
Query: 287 VAAFEVGQQVQS-QLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTS 345
+ + VQ L K F I +G+A++ MY+K G V +R VF+ + +V SW +
Sbjct: 361 LGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNT 420
Query: 346 MIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIF-QSMEN 404
+I GY +NGF EA+E++ M+ E + N T++S L AC+ AG + +G+++ + ++N
Sbjct: 421 IISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN 480
Query: 405 EYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAK 464
+ + + D+ G+ GRL A ++P R NS W L++ HG+ E A
Sbjct: 481 GLYLDVFV--VTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKAV 537
Query: 465 LAASELF 471
+ E+
Sbjct: 538 MLFKEML 544
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 154/342 (45%), Gaps = 49/342 (14%)
Query: 50 SGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYL 109
S + +H+ ++ + + N IS KL+ LY + AR FD ++++ + A+N MI Y
Sbjct: 69 SAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYG 128
Query: 110 KQGQVEESLGLVRR-LLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKA 168
+ G E + +L SG D TF +LKA +
Sbjct: 129 RAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV---------------------- 166
Query: 169 DVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAEC 228
++ + + C AL ++ + V + SLI Y +A
Sbjct: 167 ---IDGNKIHCLALKFGFMWD-----------------VYVAASLIHLYSRYKAVGNARI 206
Query: 229 IFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVA 288
+F + +D+ +NAMI GY ++ A +L + ++ ++ T S++ AC+
Sbjct: 207 LFDEMPVRDMGSWNAMISGYCQSGN-AKEALTLSNGLRAMDS----VTVVSLLSACTEAG 261
Query: 289 AFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMID 348
F G + S +K + + + LID+Y++ GR+ D ++VFD M+ +++ SW S+I
Sbjct: 262 DFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIK 321
Query: 349 GYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAG 390
Y N P A+ LFQ+M++ + P+ +T +S S + G
Sbjct: 322 AYELNEQPLRAISLFQEMRLSR-IQPDCLTLISLASILSQLG 362
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 140/326 (42%), Gaps = 38/326 (11%)
Query: 135 TFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV----------DVEKDDV-----LC 179
TFS+ + T GR L +G ++ A+ E DDV C
Sbjct: 5 TFSLPRQIPTCKGGRFTRVLQSIGSVIREFSASANALQDCWKNGNESKEIDDVHTLFRYC 64
Query: 180 TALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIV 239
T L + + R+ ++ + +NV S L++ Y G A F ++D+
Sbjct: 65 TNLQSAKCLHARLVVSKQI------QNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVY 118
Query: 240 VFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQ 299
+N MI GY + + + M P+ TF S++ AC V G ++
Sbjct: 119 AWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCL 175
Query: 300 LMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEA 359
+K F + + ++LI +YS+ V ++R +FD M +++ SW +MI GY ++G EA
Sbjct: 176 ALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEA 235
Query: 360 LELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACV- 418
L L ++ + VT +S LSAC AG ++G+ I + Y +K +E V
Sbjct: 236 LTLSNGLR-----AMDSVTVVSLLSACTEAGDFNRGVTI-----HSYSIKHGLESELFVS 285
Query: 419 ---VDLLGRAGRLNQAWEFVMRMPER 441
+DL GRL + RM R
Sbjct: 286 NKLIDLYAEFGRLRDCQKVFDRMYVR 311
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 150/510 (29%), Positives = 270/510 (52%), Gaps = 53/510 (10%)
Query: 10 FSSRALFSPHQPFLQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNI 69
+S A F P + Q D + S +T++ G +H +++K+G +
Sbjct: 3 LNSSAFFVPCHNYNQICDLLLSSARTRSTIK----------GLQLHGYVVKSGLSLIPLV 52
Query: 70 SIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGE 129
+ L+ Y K +R+ F+D K+ + ++ +I + + SL +++++
Sbjct: 53 ANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNL 112
Query: 130 KLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKN 189
+ D +L ++T + + D+GR VH +K D D + ++L D Y K
Sbjct: 113 RPD----DHVLPSATKSCA--ILSRCDIGRSVHCLSMKTGYDA--DVFVGSSLVDMYAKC 164
Query: 190 GRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYS 249
G I YAR +FD M ++NV++ + ++ GY G ++A +F++ + +++ V
Sbjct: 165 GEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAV--------- 215
Query: 250 KTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHI 309
N +F+S+I C+ E+G+Q+ +K+ F
Sbjct: 216 -----------------------NDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSS 252
Query: 310 KLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIE 369
+GS+L+ +YSKCG + +VF+ + KN+ W +M+ Y ++ + +ELF++M++
Sbjct: 253 FVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLS 312
Query: 370 YGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLN 429
G+ PNF+TFL+ L+AC+HAGLVD+G F M+ E +++P +HYA +VD+LGRAGRL
Sbjct: 313 -GMKPNFITFLNVLNACSHAGLVDEGRYYFDQMK-ESRIEPTDKHYASLVDMLGRAGRLQ 370
Query: 430 QAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTL 489
+A E + MP P VW ALL+SC +H NTE+A AA ++F+L G +++LSN
Sbjct: 371 EALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVS-SGMHISLSNAY 429
Query: 490 AAAEKWDSVSELREVMKERGISKDTACSWV 519
AA +++ ++ R+++++RG K+T SWV
Sbjct: 430 AADGRFEDAAKARKLLRDRGEKKETGLSWV 459
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 144/472 (30%), Positives = 238/472 (50%), Gaps = 46/472 (9%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQ 111
+ IH+ I+ G +T KLL L CL YA + + + ++ YN +I + +
Sbjct: 26 KQIHAQIITIGLSHHTYPLSKLLHLSSTV-CLSYALSILRQIPNPSVFLYNTLISSIVSN 84
Query: 112 ---GQVEESLGLVRRLLVSGEKL---DGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQI 165
Q + L ++L S + FT+ + KAS A GR +H +
Sbjct: 85 HNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFD-----AQWHRHGRALHAHV 139
Query: 166 LKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKD 225
LK V D + AL + Y N G ++
Sbjct: 140 LKFLEPVNHDRFVQAAL-------------------------------VGFYANCGKLRE 168
Query: 226 AECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACS 285
A +F++ + D+ +N ++ Y+ + E + EV + R+ RPN + ++I +C+
Sbjct: 169 ARSLFERIREPDLATWNTLLAAYANSEEIDSDE-EVLLLFMRMQVRPNELSLVALIKSCA 227
Query: 286 MVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTS 345
+ F G ++K + +G++LID+YSKCG + +R+VFD M Q++V + +
Sbjct: 228 NLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNA 287
Query: 346 MIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENE 405
MI G +GF E +EL++ + I G+VP+ TF+ +SAC+H+GLVD+GL+IF SM+
Sbjct: 288 MIRGLAVHGFGQEGIELYKSL-ISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAV 346
Query: 406 YKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKL 465
Y ++P++EHY C+VDLLGR+GRL +A E + +MP +PN+ +W + L S + HG+ E ++
Sbjct: 347 YGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEI 406
Query: 466 AASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACS 517
A L L G YV LSN A +W V + RE+MK+ ++K S
Sbjct: 407 ALKHLLGLEFEN-SGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGIS 457
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 102/237 (43%), Gaps = 22/237 (9%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G H ++LK N + L+ LY KC CL +AR+VFD++ + +S YN MI
Sbjct: 235 GVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAV 294
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQI---LK 167
G +E + L + L+ G D TF + + A S SG L D G +QI +K
Sbjct: 295 HGFGQEGIELYKSLISQGLVPDSATFVVTISA-CSHSG-----LVDEG----LQIFNSMK 344
Query: 168 ADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEK-NVISSTSLISGYMNQGLFKDA 226
A +E L D ++GR+ A M K N S + G F+
Sbjct: 345 AVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERG 404
Query: 227 ECIFQKTV------DKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTF 277
E + + + V+ + + G ++ ++ ++ E+ D R+N P IST
Sbjct: 405 EIALKHLLGLEFENSGNYVLLSNIYAGVNRWTD-VEKTRELMKD-HRVNKSPGISTL 459
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 136/431 (31%), Positives = 234/431 (54%), Gaps = 15/431 (3%)
Query: 85 YARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKAST 144
YA + L D +N++I + E+S+ + ++L G D T+ ++K+S+
Sbjct: 60 YAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSS 119
Query: 145 STSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSE 204
S R LG +H ++K+ + E D +C L Y A AR +FD M
Sbjct: 120 RLSNRK------LGGSLHCSVVKSGL--EWDLFICNTLIHMYGSFRDQASARKLFDEMPH 171
Query: 205 KNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYID 264
KN+++ S++ Y G A +F + ++D+V +++MI+GY K E ++LE++
Sbjct: 172 KNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGE-YNKALEIFDQ 230
Query: 265 MQRL-NFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCG 323
M R+ + + N T S+I AC+ + A G+ V ++ + L ++LIDMY+KCG
Sbjct: 231 MMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCG 290
Query: 324 RVVDSRRVF--DHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLS 381
+ D+ VF + + + W ++I G +GF E+L+LF KM+ E + P+ +TFL
Sbjct: 291 SIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMR-ESKIDPDEITFLC 349
Query: 382 ALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPER 441
L+AC+H GLV + F+S++ E +P+ EHYAC+VD+L RAG + A +F+ MP +
Sbjct: 350 LLAACSHGGLVKEAWHFFKSLK-ESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIK 408
Query: 442 PNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSEL 501
P + ALL+ C HGN E+A+ +L +L + G YV L+N A +++ + +
Sbjct: 409 PTGSMLGALLNGCINHGNLELAETVGKKLIELQPH-NDGRYVGLANVYAINKQFRAARSM 467
Query: 502 REVMKERGISK 512
RE M+++G+ K
Sbjct: 468 REAMEKKGVKK 478
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 125/287 (43%), Gaps = 10/287 (3%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G ++H ++K+G + I L+ +Y AR++FD++ K L +N ++ AY K
Sbjct: 127 GGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAK 186
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
G V + R + + D T+S ++ N A L +++ + KA+
Sbjct: 187 SGDVVSA----RLVFDEMSERDVVTWSSMIDGYVKRGEYNKA-LEIFDQMMRMGSSKAN- 240
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
+V V+C + G+ + R + DV VI TSLI Y G DA +F
Sbjct: 241 EVTMVSVICACAHLGALNRGKTVH-RYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVF 299
Query: 231 QKTVDK--DIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVA 288
+ K D +++NA+I G + + SL+++ M+ P+ TF ++ ACS
Sbjct: 300 YRASVKETDALMWNAIIGGLA-SHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGG 358
Query: 289 AFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHM 335
+ L ++ + + ++D+ S+ G V D+ M
Sbjct: 359 LVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEM 405
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 153/489 (31%), Positives = 257/489 (52%), Gaps = 23/489 (4%)
Query: 35 LSNTLQYYINS-----DTPSSGQTIHSHILKTGF-VPNTNISIKLLVLYLKCNCLRYARQ 88
LS+ L +++ S + + + H +++ TG N N++ K + LRYA
Sbjct: 10 LSSGLNWFVTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVA-KFIEACSNAGHLRYAYS 68
Query: 89 VFDDLRDKTLSAYNYMIGAY--LKQGQVEE-SLGLVRRLLVSGEKLDGFTFSMILKASTS 145
VF +N MI A L + ++ + R+L K D FTF +LK +
Sbjct: 69 VFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVR 128
Query: 146 TSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEK 205
S GR +H Q++ D V T L Y G + AR +FD M K
Sbjct: 129 VSDVW------FGRQIHGQVVVFGFDSSVHVV--TGLIQMYFSCGGLGDARKMFDEMLVK 180
Query: 206 NVISSTSLISGYMNQGLFKDAECIFQ--KTVDKDIVVFNAMIEGYSKTSECATRSLEVYI 263
+V +L++GY G +A + + ++ V + +I GY+K+ A+ ++EV+
Sbjct: 181 DVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGR-ASEAIEVFQ 239
Query: 264 DMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCG 323
M N P+ T +++ AC+ + + E+G+++ S + + L +A+IDMY+K G
Sbjct: 240 RMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSG 299
Query: 324 RVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSAL 383
+ + VF+ ++++NV +WT++I G +G EAL +F +M ++ GV PN VTF++ L
Sbjct: 300 NITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRM-VKAGVRPNDVTFIAIL 358
Query: 384 SACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPN 443
SAC+H G VD G +F SM ++Y + P +EHY C++DLLGRAG+L +A E + MP + N
Sbjct: 359 SACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKAN 418
Query: 444 SDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELRE 503
+ +W +LL++ +H + E+ + A SEL KL N G Y+ L+N + +WD +R
Sbjct: 419 AAIWGSLLAASNVHHDLELGERALSELIKLEPN-NSGNYMLLANLYSNLGRWDESRMMRN 477
Query: 504 VMKERGISK 512
+MK G+ K
Sbjct: 478 MMKGIGVKK 486
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 231 bits (590), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 163/530 (30%), Positives = 264/530 (49%), Gaps = 78/530 (14%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQ 111
Q +H + GF + + +L LY KC+ + A+ +FD + + + ++N MI Y
Sbjct: 164 QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASV 223
Query: 112 GQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVD 171
G + E L L+ R+ G + D TF AS S SG + L ++GR++H QI+K D
Sbjct: 224 GNMSEILKLLYRMRGDGLRPDQQTFG----ASLSVSG-TMCDL-EMGRMLHCQIVKTGFD 277
Query: 172 VE-----------------------------KDDVLCTALTDSYVKNGRIAYARTVF--- 199
V+ KD V T + ++ GR A VF
Sbjct: 278 VDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEM 337
Query: 200 -----DVMSEK--NVISS-----------------------------TSLISGYMNQGLF 223
D+ SE +V++S SLI+ Y G
Sbjct: 338 LQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHL 397
Query: 224 KDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNIS-TFASIIG 282
+ IF++ ++D+V +NA+I GY++ + ++L ++ +M+ + S T S++
Sbjct: 398 DKSLVIFERMNERDLVSWNAIISGYAQNVD-LCKALLLFEEMKFKTVQQVDSFTVVSLLQ 456
Query: 283 ACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFS 342
ACS A VG+ + ++++ + +AL+DMYSKCG + ++R FD + K+V S
Sbjct: 457 ACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVS 516
Query: 343 WTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSM 402
W +I GYG +G D ALE++ + + G+ PN V FL+ LS+C+H G+V +GL+IF SM
Sbjct: 517 WGILIAGYGFHGKGDIALEIYSEF-LHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSM 575
Query: 403 ENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEM 462
++ V+P EH ACVVDLL RA R+ A++F RP+ DV +L +CR +G TE+
Sbjct: 576 VRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEV 635
Query: 463 AKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISK 512
+ ++ +L G G YV L ++ AA ++WD VSE M+ G+ K
Sbjct: 636 EDIICEDMIELKP-GDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKK 684
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 182/406 (44%), Gaps = 50/406 (12%)
Query: 49 SSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAY 108
S G +IH +L GF + IS L+ LY K L +AR+VF+++R++ + + MIG Y
Sbjct: 63 SFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCY 122
Query: 109 LKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKA 168
+ G V E+ LV + G K T +L + + L D I
Sbjct: 123 SRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEIT--QLQCLHDFAVIYGF----- 175
Query: 169 DVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAEC 228
D D+ + ++ + Y K + A+ +FD M +++++S ++ISGY + G +
Sbjct: 176 DCDI----AVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEI-- 229
Query: 229 IFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVA 288
L++ M+ RP+ TF + + +
Sbjct: 230 ------------------------------LKLLYRMRGDGLRPDQQTFGASLSVSGTMC 259
Query: 289 AFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMID 348
E+G+ + Q++KT F + L +ALI MY KCG+ S RV + + K+V WT MI
Sbjct: 260 DLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMIS 319
Query: 349 GYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIF-QSMENEYK 407
G + G ++AL +F +M ++ G + S +++CA G D G + + + Y
Sbjct: 320 GLMRLGRAEKALIVFSEM-LQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYT 378
Query: 408 V-KPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLS 452
+ P + ++ + + G L+++ RM ER W A++S
Sbjct: 379 LDTPALNS---LITMYAKCGHLDKSLVIFERMNERDLVS-WNAIIS 420
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 120/272 (44%), Gaps = 42/272 (15%)
Query: 241 FNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQL 300
FN+ I S + + L + M P+ TF S++ AC+ + G + Q+
Sbjct: 14 FNSHINHLSSHGD-HKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQV 72
Query: 301 MKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEAL 360
+ F + S+L+++Y+K G + +R+VF+ M +++V WT+MI Y + G EA
Sbjct: 73 LVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEAC 132
Query: 361 ELFQKMQIEYGVVPNFVTFLSALSA--------CAHAGLVDKGLE----IFQSMENEYKV 408
L +M+ + G+ P VT L LS C H V G + + SM N Y
Sbjct: 133 SLVNEMRFQ-GIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLY-- 189
Query: 409 KPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGN-TEMAKLAA 467
C D +G A L E+ + W ++S GN +E+ KL
Sbjct: 190 --------CKCDHVGDAKDL-------FDQMEQRDMVSWNTMISGYASVGNMSEILKL-- 232
Query: 468 SELFKLNANG-RP-----GAYVALSNTLAAAE 493
L+++ +G RP GA +++S T+ E
Sbjct: 233 --LYRMRGDGLRPDQQTFGASLSVSGTMCDLE 262
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 143/308 (46%), Gaps = 13/308 (4%)
Query: 210 STSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLN 269
S+SL++ Y GL A +F++ ++D+V + AMI YS+ + + +M+
Sbjct: 84 SSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAG-IVGEACSLVNEMRFQG 142
Query: 270 FRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSR 329
+P T ++ + Q + + F I + ++++++Y KC V D++
Sbjct: 143 IKPGPVTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAK 199
Query: 330 RVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHA 389
+FD M Q+++ SW +MI GY G E L+L +M+ + G+ P+ TF ++LS
Sbjct: 200 DLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGD-GLRPDQQTFGASLSVSGTM 258
Query: 390 GLVDKGLEIF-QSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDV-- 446
++ G + Q ++ + V ++ ++ + + G+ ++ + + PN DV
Sbjct: 259 CDLEMGRMLHCQIVKTGFDVDMHLK--TALITMYLKCGKEEASYRVLETI---PNKDVVC 313
Query: 447 WAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMK 506
W ++S G E A + SE+ + ++ A ++ + A +D + + +
Sbjct: 314 WTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVL 373
Query: 507 ERGISKDT 514
G + DT
Sbjct: 374 RHGYTLDT 381
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 231 bits (590), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 152/560 (27%), Positives = 267/560 (47%), Gaps = 79/560 (14%)
Query: 22 FLQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCN 81
L H F + S L+ +G+ IH ++K N ++ LL +Y KC
Sbjct: 132 LLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLT-GLLDMYAKCG 190
Query: 82 CLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILK 141
++ A +VF+D+ + + + MI Y+K EE L L R+ + + +T+ ++
Sbjct: 191 EIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIM 250
Query: 142 ASTSTSGRNVAPLGDLGRIVHVQILKADVDVEK--------------------------- 174
A T S + G+ H ++K+ +++
Sbjct: 251 ACTKLSALHQ------GKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHS 304
Query: 175 --DDVLCTALTDSYVKNGRIAYARTVFDVMS----EKNVISSTSLISGY----------- 217
D V+ TA+ Y NG + A ++F M + N ++ S++SG
Sbjct: 305 HVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRS 364
Query: 218 -----MNQGLF------------------KDAECIFQKTVDKDIVVFNAMIEGYSKTSEC 254
+ G++ +DA+ +F+ +KDIV +N++I G+S+
Sbjct: 365 VHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGS- 423
Query: 255 ATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGH--IKLG 312
+L ++ M + PN T AS+ AC+ + + VG + + +K F + +G
Sbjct: 424 IHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVG 483
Query: 313 SALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGV 372
+AL+D Y+KCG +R +FD + +KN +W++MI GYGK G +LELF++M ++
Sbjct: 484 TALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEM-LKKQQ 542
Query: 373 VPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAW 432
PN TF S LSAC H G+V++G + F SM +Y P +HY C+VD+L RAG L QA
Sbjct: 543 KPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQAL 602
Query: 433 EFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAA 492
+ + +MP +P+ + A L C +H ++ ++ ++ L+ + YV +SN A+
Sbjct: 603 DIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPD-DASYYVLVSNLYASD 661
Query: 493 EKWDSVSELREVMKERGISK 512
+W+ E+R +MK+RG+SK
Sbjct: 662 GRWNQAKEVRNLMKQRGLSK 681
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 135/288 (46%), Gaps = 36/288 (12%)
Query: 210 STSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLN 269
+T L+S Y G KDA +F + + D ++ M+ Y E + +++Y + +
Sbjct: 79 ATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKE-SVEVVKLYDLLMKHG 137
Query: 270 FRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSR 329
FR + F+ + AC+ + + G+++ QL+K P F ++ L + L+DMY+KCG + +
Sbjct: 138 FRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVL-TGLLDMYAKCGEIKSAH 196
Query: 330 RVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACA-- 387
+VF+ + +NV WTSMI GY KN +E L LF +M+ E V+ N T+ + + AC
Sbjct: 197 KVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMR-ENNVLGNEYTYGTLIMACTKL 255
Query: 388 ---------HAGLVDKGLEIFQSM--------------ENEYKVKPRMEH-----YACVV 419
H LV G+E+ + N +V H + ++
Sbjct: 256 SALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMI 315
Query: 420 DLLGRAGRLNQAWEFVMRMPE---RPNSDVWAALLSSCRLHGNTEMAK 464
G +N+A +M +PN A++LS C L N E+ +
Sbjct: 316 VGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGR 363
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 4/140 (2%)
Query: 13 RALFSPHQPFLQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISI- 71
ALF H+ + + P+ +++ + + + G ++H++ +K GF+ ++++ +
Sbjct: 426 EALFLFHR--MNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVG 483
Query: 72 -KLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEK 130
LL Y KC + AR +FD + +K ++ MIG Y KQG SL L +L +K
Sbjct: 484 TALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQK 543
Query: 131 LDGFTFSMILKASTSTSGRN 150
+ TF+ IL A T N
Sbjct: 544 PNESTFTSILSACGHTGMVN 563
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 231 bits (590), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 131/442 (29%), Positives = 231/442 (52%), Gaps = 42/442 (9%)
Query: 83 LRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKA 142
+ YAR +F+ + + + +N M Y + E L +L G D +TF +LKA
Sbjct: 79 MSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKA 138
Query: 143 STSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVM 202
VA + GR +H +K +D
Sbjct: 139 CA------VAKALEEGRQLHCLSMKLGLD------------------------------- 161
Query: 203 SEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVY 262
NV +LI+ Y A C+F + V+ +V +NAMI GY++ + +L ++
Sbjct: 162 --DNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNR-PNEALSLF 218
Query: 263 IDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKC 322
+MQ +PN T S++ +C+++ + ++G+ + K F ++K+ +ALIDM++KC
Sbjct: 219 REMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKC 278
Query: 323 GRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSA 382
G + D+ +F+ M K+ +W++MI Y +G ++++ +F++M+ E V P+ +TFL
Sbjct: 279 GSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSE-NVQPDEITFLGL 337
Query: 383 LSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERP 442
L+AC+H G V++G + F M +++ + P ++HY +VDLL RAG L A+EF+ ++P P
Sbjct: 338 LNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISP 397
Query: 443 NSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELR 502
+W LL++C H N ++A+ + +F+L+ + G YV LSN A +KW+ V LR
Sbjct: 398 TPMLWRILLAACSSHNNLDLAEKVSERIFELD-DSHGGDYVILSNLYARNKKWEYVDSLR 456
Query: 503 EVMKERGISKDTACSWVGADSV 524
+VMK+R K CS + ++V
Sbjct: 457 KVMKDRKAVKVPGCSSIEVNNV 478
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 122/294 (41%), Gaps = 57/294 (19%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ +H +K G N + L+ +Y +C + AR VFD + + + YN MI Y +
Sbjct: 148 GRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYAR 207
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLG--DLGRIVHVQILKA 168
+ + E+L L R + K + T +L + A LG DLG+ +H
Sbjct: 208 RNRPNEALSLFREMQGKYLKPNEITLLSVLSS--------CALLGSLDLGKWIH------ 253
Query: 169 DVDVEKDDVLC------TALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGL 222
K C TAL D + K G + A ++F+ M K+ + +++I Y N G
Sbjct: 254 --KYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGK 311
Query: 223 FKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIG 282
A +S+ ++ M+ N +P+ TF ++
Sbjct: 312 --------------------------------AEKSMLMFERMRSENVQPDEITFLGLLN 339
Query: 283 ACSMVAAFEVGQQVQSQLM-KTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHM 335
ACS E G++ SQ++ K IK +++D+ S+ G + D+ D +
Sbjct: 340 ACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKL 393
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 231 bits (589), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 141/475 (29%), Positives = 249/475 (52%), Gaps = 29/475 (6%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ +HS +K G + + L+ +Y KC C+ AR+VFD++ ++ ++ +N MIG Y+
Sbjct: 65 GKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMS 124
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
G + GL + V +T T + G I + L +
Sbjct: 125 NGDAVLASGLFEEISVC--------------RNTVTWIEMIKGYGKRIEIEKARELFERM 170
Query: 171 DVEKDDVLC-TALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECI 229
E +V + + YV N ++ AR F+ + EKN + ++SGY G +A I
Sbjct: 171 PFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAI 230
Query: 230 FQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAA 289
F + +D+V++N +I GY++ + +++ + +MQ + P+ T +SI+ AC+
Sbjct: 231 FYRVFARDLVIWNTLIAGYAQNGY-SDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGR 289
Query: 290 FEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDG 349
+VG++V S + + + +ALIDMY+KCG + ++ VF+ + ++V SMI
Sbjct: 290 LDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISC 349
Query: 350 YGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVK 409
+G EALE+F M+ + P+ +TF++ L+AC H G + +GL+IF M+ + VK
Sbjct: 350 LAIHGKGKEALEMFSTME-SLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQ-DVK 407
Query: 410 PRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASE 469
P ++H+ C++ LLGR+G+L +A+ V M +PN V ALL +C++H +TEMA+ +
Sbjct: 408 PNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAE----Q 463
Query: 470 LFKL--NANGRPGAY-----VALSNTLAAAEKWDSVSELREVMKERGISKDTACS 517
+ K+ A +Y ++SN A E+W + LR M++RG+ K S
Sbjct: 464 VMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 148/283 (52%), Gaps = 14/283 (4%)
Query: 151 VAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISS 210
V P LG+++H + +K V D ++ ++L Y K G + AR VFD M E+NV +
Sbjct: 58 VVPRVVLGKLLHSESIK--FGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATW 115
Query: 211 TSLISGYMNQGLFKDAECIFQK-TVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLN 269
++I GYM+ G A +F++ +V ++ V + MI+GY K E ++ E++ +R+
Sbjct: 116 NAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIE-IEKARELF---ERMP 171
Query: 270 FR-PNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDS 328
F N+ ++ ++G E ++ + + F + S ++ Y + G V ++
Sbjct: 172 FELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAF----VWSLMMSGYFRIGDVHEA 227
Query: 329 RRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAH 388
R +F + +++ W ++I GY +NG+ D+A++ F MQ E G P+ VT S LSACA
Sbjct: 228 RAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGE-GYEPDAVTVSSILSACAQ 286
Query: 389 AGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQA 431
+G +D G E+ S+ N ++ ++D+ + G L A
Sbjct: 287 SGRLDVGREV-HSLINHRGIELNQFVSNALIDMYAKCGDLENA 328
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 94/174 (54%), Gaps = 9/174 (5%)
Query: 280 IIGACSMVAAFEV-GQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQK 338
I+ AC+ V V G+ + S+ +K + +GS+LI MY KCG VV +R+VFD M ++
Sbjct: 51 ILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPER 110
Query: 339 NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEI 398
NV +W +MI GY NG A LF+ E V N VT++ + ++K E+
Sbjct: 111 NVATWNAMIGGYMSNGDAVLASGLFE----EISVCRNTVTWIEMIKGYGKRIEIEKAREL 166
Query: 399 FQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLS 452
F+ M E K ++ ++ ++ + ++ A +F +PE+ N+ VW+ ++S
Sbjct: 167 FERMPFELK---NVKAWSVMLGVYVNNRKMEDARKFFEDIPEK-NAFVWSLMMS 216
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 152/495 (30%), Positives = 249/495 (50%), Gaps = 44/495 (8%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLKCN----CLRYARQVFDDLRDKTLSAYNYMIGA 107
Q H+ +LKTG +T S LV + N + YA + + + +N +I A
Sbjct: 56 QQAHAFMLKTGLFHDT-FSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRA 114
Query: 108 YLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILK 167
Y E +L + R +L+ D ++F+ +LKA + G + GR +H +K
Sbjct: 115 YANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGF------EEGRQIHGLFIK 168
Query: 168 A----DVDVE-------------------------KDDVLCTALTDSYVKNGRIAYARTV 198
+ DV VE +D V +L +Y++ G + AR +
Sbjct: 169 SGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARAL 228
Query: 199 FDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRS 258
FD M E+NV S +ISGY GL K+A+ +F +D+V +NAM+ Y+ C
Sbjct: 229 FDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVG-CYNEV 287
Query: 259 LEVYIDM-QRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALID 317
LEV+ M +P+ T S++ AC+ + + G+ V + K L +AL+D
Sbjct: 288 LEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVD 347
Query: 318 MYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFV 377
MYSKCG++ + VF +++V +W S+I +G +ALE+F +M E G PN +
Sbjct: 348 MYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYE-GFKPNGI 406
Query: 378 TFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMR 437
TF+ LSAC H G++D+ ++F+ M + Y+V+P +EHY C+VDLLGR G++ +A E V
Sbjct: 407 TFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNE 466
Query: 438 MPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDS 497
+P S + +LL +C+ G E A+ A+ L +LN G Y +SN A+ +W+
Sbjct: 467 IPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSG-YAQMSNLYASDGRWEK 525
Query: 498 VSELREVMKERGISK 512
V + R M+ +++
Sbjct: 526 VIDGRRNMRAERVNR 540
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 146/405 (36%), Gaps = 125/405 (30%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ IH +K+G V + + L+ +Y + AR+V D + + ++N ++ AYL+
Sbjct: 159 GRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLE 218
Query: 111 QGQVEESLGLVRRL----------LVSGEKLDGF-------------------------- 134
+G V+E+ L + ++SG G
Sbjct: 219 KGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAY 278
Query: 135 -----------TFSMILKASTSTSG--------RNVAPLGDL--GRIVHVQILKADVDVE 173
F+ +L ST A LG L G VHV I K +++E
Sbjct: 279 AHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIE 338
Query: 174 KDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKT 233
L TAL D Y K G+I A VF S+++V + S+IS GL KDA
Sbjct: 339 --GFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDA------- 389
Query: 234 VDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVG 293
LE++ +M F+PN TF ++ AC+ V
Sbjct: 390 -------------------------LEIFSEMVYEGFKPNGITFIGVLSACNHV------ 418
Query: 294 QQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKN 353
G + L +M S RV + + + M+D G+
Sbjct: 419 -------------GMLDQARKLFEMMSSVYRV-----------EPTIEHYGCMVDLLGRM 454
Query: 354 GFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEI 398
G +EA EL ++ + + S L AC G +++ I
Sbjct: 455 GKIEEAEELVNEIPADEAS----ILLESLLGACKRFGQLEQAERI 495
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 146/523 (27%), Positives = 255/523 (48%), Gaps = 55/523 (10%)
Query: 1 MNNGILRPFFSSRAL---FSPHQPFLQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSH 57
++N +++ + +R F+ ++ + F P + + + S G +HS
Sbjct: 44 LSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQ 103
Query: 58 ILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEES 117
I + GF + +S ++ +Y K + AR FD++ ++ ++ +I Y++ G+
Sbjct: 104 IWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGE---- 159
Query: 118 LGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDV 177
L L +L ++ HV KD V
Sbjct: 160 LDLASKLF--------------------------------DQMPHV----------KDVV 177
Query: 178 LCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKD 237
+ A+ D +VK+G + AR +FD M+ K VI+ T++I GY N A +F +++
Sbjct: 178 IYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERN 237
Query: 238 IVVFNAMIEGYSKTSECATRSLEVYIDMQ-RLNFRPNISTFASIIGACSMVAAFEVGQQV 296
+V +N MI GY + + + ++ +MQ + P+ T S++ A S A +G+
Sbjct: 238 LVSWNTMIGGYCQNKQ-PQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWC 296
Query: 297 QSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFP 356
+ + +K+ +A++DMYSKCG + ++R+FD M +K V SW +MI GY NG
Sbjct: 297 HCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNA 356
Query: 357 DEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYA 416
AL+LF M IE P+ +T L+ ++AC H GLV++G + F M E + ++EHY
Sbjct: 357 RAALDLFVTMMIEEK--PDEITMLAVITACNHGGLVEEGRKWFHVMR-EMGLNAKIEHYG 413
Query: 417 CVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNAN 476
C+VDLLGRAG L +A + + MP PN + ++ LS+C + + E A+ + +L
Sbjct: 414 CMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQ 473
Query: 477 GRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
G YV L N AA ++WD ++ VM++ K+ CS +
Sbjct: 474 N-DGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLI 515
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 208/462 (45%), Gaps = 64/462 (13%)
Query: 58 ILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDL--RDKTLSAYNYMIGAYLKQGQVE 115
+L+ N I K LV+ + YAR++FD RD + + N MI AYL+ Q
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLS-NSMIKAYLETRQYP 59
Query: 116 ESLGLVRRLLV-SGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEK 174
+S L R L + D FTF+ + K+ + ++ G +H QI +
Sbjct: 60 DSFALYRDLRKETCFAPDNFTFTTLTKSCS------LSMCVYQGLQLHSQIWR--FGFCA 111
Query: 175 DDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTV 234
D + T + D Y K G++ AR FD M ++ +S T+LISGY+ G A +F +
Sbjct: 112 DMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMP 171
Query: 235 D-KDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVG 293
KD+V++NAM++G+ K+ + T + ++ +M T ++I +M+
Sbjct: 172 HVKDVVIYNAMMDGFVKSGD-MTSARRLFDEM----------THKTVITWTTMIHG---- 216
Query: 294 QQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKN 353
Y + +R++FD M ++N+ SW +MI GY +N
Sbjct: 217 -------------------------YCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQN 251
Query: 354 GFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRME 413
P E + LFQ+MQ + P+ VT LS L A + G + G E K+ +++
Sbjct: 252 KQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLG-EWCHCFVQRKKLDKKVK 310
Query: 414 HYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELF-K 472
++D+ + G + +A MPE+ + W A++ L+GN AA +LF
Sbjct: 311 VCTAILDMYSKCGEIEKAKRIFDEMPEKQVAS-WNAMIHGYALNGNAR----AALDLFVT 365
Query: 473 LNANGRPGAYVALSNTLAAAEKWDSVSELRE---VMKERGIS 511
+ +P L+ + A V E R+ VM+E G++
Sbjct: 366 MMIEEKPDEITMLA-VITACNHGGLVEEGRKWFHVMREMGLN 406
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 141/507 (27%), Positives = 262/507 (51%), Gaps = 46/507 (9%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLKC----NCLRYARQVFDDLRDKTLSAYNYMIGA 107
+ IH+ ++ G + +N+S+ ++Y L+YA ++FD++ +S N+++
Sbjct: 29 KQIHASMVVNGLM--SNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRG 86
Query: 108 YLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNV---------------- 151
+ + E+++ L + G D +TF+ +LKA + R+
Sbjct: 87 SAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLN 146
Query: 152 -----------APLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFD 200
A GDLG + ++ K V +++T Y K G+I A +FD
Sbjct: 147 EYVKNALILFHANCGDLG--IASELFDDSAKAHK--VAWSSMTSGYAKRGKIDEAMRLFD 202
Query: 201 VMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLE 260
M K+ ++ +I+G + A +F + +KD+V +NAMI GY +L
Sbjct: 203 EMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGY-PKEALG 261
Query: 261 VYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTP-----FFGHIKLGSAL 315
++ +M+ P++ T S++ AC+++ E G+++ +++T + + +AL
Sbjct: 262 IFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNAL 321
Query: 316 IDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPN 375
IDMY+KCG + + VF + +++ +W ++I G + + ++E+F++MQ V PN
Sbjct: 322 IDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQ-RLKVWPN 379
Query: 376 FVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFV 435
VTF+ + AC+H+G VD+G + F M + Y ++P ++HY C+VD+LGRAG+L +A+ FV
Sbjct: 380 EVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFV 439
Query: 436 MRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKW 495
M PN+ VW LL +C+++GN E+ K A +L + + G YV LSN A+ +W
Sbjct: 440 ESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKD-ESGDYVLLSNIYASTGQW 498
Query: 496 DSVSELREVMKERGISKDTACSWVGAD 522
D V ++R++ + + K T S + D
Sbjct: 499 DGVQKVRKMFDDTRVKKPTGVSLIEED 525
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 229 bits (583), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 148/474 (31%), Positives = 243/474 (51%), Gaps = 41/474 (8%)
Query: 77 YLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGE-KLDGFT 135
Y K + AR +FD + ++ + + MI Y K G E+ GL R+ G+ K++ T
Sbjct: 218 YCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNT 277
Query: 136 FSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYA 195
+++ KA R+ + G +H L + + +E D L +L Y K G + A
Sbjct: 278 LAVMFKAC-----RDFVRYRE-GSQIHG--LVSRMPLEFDLFLGNSLMSMYSKLGYMGEA 329
Query: 196 RTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYS---KTS 252
+ VF VM K+ +S SLI+G + + +A +F+K KD+V + MI+G+S + S
Sbjct: 330 KAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEIS 389
Query: 253 ECAT---------------------------RSLEVYIDMQRLNFRPNISTFASIIGACS 285
+C +L + M + PN TF+S++ A +
Sbjct: 390 KCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATA 449
Query: 286 MVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTS 345
+A G Q+ +++K + + ++L+ MY KCG D+ ++F + + N+ S+ +
Sbjct: 450 SLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNT 509
Query: 346 MIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENE 405
MI GY NGF +AL+LF ++ G PN VTFL+ LSAC H G VD G + F+SM++
Sbjct: 510 MISGYSYNGFGKKALKLFSMLE-SSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSS 568
Query: 406 YKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKL 465
Y ++P +HYAC+VDLLGR+G L+ A + MP +P+S VW +LLS+ + H ++A+L
Sbjct: 569 YNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAEL 628
Query: 466 AASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
AA +L +L + YV LS + K + + K + I KD SW+
Sbjct: 629 AAKKLIELEPDS-ATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWI 681
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/447 (23%), Positives = 203/447 (45%), Gaps = 37/447 (8%)
Query: 17 SPHQPFLQ-NHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISI---- 71
S H+P Q +F+ +T ++T + NS + + + F +N SI
Sbjct: 28 SNHEPITQKTRNFLETTT--TSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWI 85
Query: 72 KLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKL 131
++ Y + + A QVFD++ + ++YN MI A +K + LG L +
Sbjct: 86 AMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKN---KCDLGKAYELFCDIPEK 142
Query: 132 DGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVE-KDDVLCTALTDSYVKNG 190
+ +++ ++ GR + L A+ V+ +D V L Y++ G
Sbjct: 143 NAVSYATMITGFVRA-----------GRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAG 191
Query: 191 RIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSK 250
+ A VF M+ K V+S +S++ GY G DA +F + +++++ + AMI+GY K
Sbjct: 192 KWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFK 251
Query: 251 TSECATRSLEVYIDM-QRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHI 309
+++ M Q + + N +T A + AC + G Q+ + + P +
Sbjct: 252 AG-FFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDL 310
Query: 310 KLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIE 369
LG++L+ MYSK G + +++ VF M K+ SW S+I G + EA ELF+KM +
Sbjct: 311 FLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGK 370
Query: 370 YGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLN 429
+ V++ + + G + K +E+F M + + + ++ G
Sbjct: 371 -----DMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNIT-----WTAMISAFVSNGYYE 420
Query: 430 QAWEFVMRMPER---PNSDVWAALLSS 453
+A + +M ++ PNS ++++LS+
Sbjct: 421 EALCWFHKMLQKEVCPNSYTFSSVLSA 447
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 55/116 (47%)
Query: 27 DFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYA 86
+ P+S S+ L + G IH ++K V + ++ L+ +Y KC A
Sbjct: 433 EVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDA 492
Query: 87 RQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKA 142
++F + + + +YN MI Y G +++L L L SG++ +G TF +L A
Sbjct: 493 YKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSA 548
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 228 bits (582), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 155/544 (28%), Positives = 261/544 (47%), Gaps = 64/544 (11%)
Query: 36 SNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRD 95
S L + + S+ G + S ++KTG + + + +Y + R AR+VFD++
Sbjct: 178 STALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSF 237
Query: 96 KTLSAYNYMIGAYLKQGQVE-ESLGLVRRLLVSGEKLDGFTFSMI---------LKASTS 145
K + ++N ++ ++G E++ + R ++ G +LD +F+ + LK +
Sbjct: 238 KDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQ 297
Query: 146 TSG----RNVAPLGDLGRIVHVQILKADV-----------------------DVEKDD-- 176
G R L ++G I+ + K V KDD
Sbjct: 298 IHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDDAV 357
Query: 177 ---------------VLCTALTDSYVKNGRIAYARTVFDVMSEKNVISS----TSLISGY 217
V L ++ N +I + + + +S S I+ Y
Sbjct: 358 SIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLY 417
Query: 218 MNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTF 277
+DA+ F+ ++I+ +NAMI G+++ + +L++++ PN TF
Sbjct: 418 AKFEALEDAKKAFEDITFREIISWNAMISGFAQNG-FSHEALKMFLSAAAETM-PNEYTF 475
Query: 278 ASIIGACSMVAAFEV--GQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHM 335
S++ A + V GQ+ + L+K + SAL+DMY+K G + +S +VF+ M
Sbjct: 476 GSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEM 535
Query: 336 HQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKG 395
QKN F WTS+I Y +G + + LF KM I+ V P+ VTFLS L+AC G+VDKG
Sbjct: 536 SQKNQFVWTSIISAYSSHGDFETVMNLFHKM-IKENVAPDLVTFLSVLTACNRKGMVDKG 594
Query: 396 LEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCR 455
EIF M Y ++P EHY+C+VD+LGRAGRL +A E + +P P + ++L SCR
Sbjct: 595 YEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCR 654
Query: 456 LHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTA 515
LHGN +M A ++ G+YV + N A E+WD +E+R+ M+++ +SK+
Sbjct: 655 LHGNVKMGAKVAELAMEMKPE-LSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAG 713
Query: 516 CSWV 519
SW+
Sbjct: 714 FSWI 717
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 97/183 (53%), Gaps = 6/183 (3%)
Query: 207 VISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQ 266
V S +++ Y G F +A CIF+ VD D+V +N ++ G+ +L + M+
Sbjct: 111 VCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQ----IALNFVVRMK 166
Query: 267 RLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVV 326
+ T+++ + C F +G Q+QS ++KT + +G++ I MYS+ G
Sbjct: 167 SAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFR 226
Query: 327 DSRRVFDHMHQKNVFSWTSMIDGYGKNG-FPDEALELFQKMQIEYGVVPNFVTFLSALSA 385
+RRVFD M K++ SW S++ G + G F EA+ +F+ M E GV + V+F S ++
Sbjct: 227 GARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMRE-GVELDHVSFTSVITT 285
Query: 386 CAH 388
C H
Sbjct: 286 CCH 288
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 147/349 (42%), Gaps = 63/349 (18%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G IH +KTGFV ++ + LY K L A++ F+D+ + + ++N MI + +
Sbjct: 391 GLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQ 450
Query: 111 QGQVEESLGLVRRLLVSGEKL-DGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKAD 169
G E+L + L + E + + +TF +L A +V G+ H +LK
Sbjct: 451 NGFSHEALKMF--LSAAAETMPNEYTFGSVLNAIAFAEDISVKQ----GQRCHAHLLK-- 502
Query: 170 VDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECI 229
+ + V+ +AL D Y K G I + VF+ MS+KN TS+IS Y + G F+ +
Sbjct: 503 LGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNL 562
Query: 230 FQK------------------------TVDKDIVVFNAMIEGYS-----KTSEC------ 254
F K VDK +FN MIE Y+ + C
Sbjct: 563 FHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLG 622
Query: 255 -ATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGS 313
A R E M + P S S++G+C + ++G +V M+ +L
Sbjct: 623 RAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMK----PELSG 678
Query: 314 ALIDMYS------KCGRVVDSRRVFDHMHQKNV-----FSWTSMIDGYG 351
+ + MY+ + + + R+ M +KNV FSW + D G
Sbjct: 679 SYVQMYNIYAEKEEWDKAAEIRKA---MRKKNVSKEAGFSWIDVGDTEG 724
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 228 bits (582), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 158/548 (28%), Positives = 255/548 (46%), Gaps = 69/548 (12%)
Query: 38 TLQYYINSDTPSSGQTIHSHILKTGFVPNT-NISIKLLVLYLKCNCLRYARQVFDDLRDK 96
TLQ SGQ IH +++ GF+ ++ L+ +Y KC +R A VF ++
Sbjct: 66 TLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SER 124
Query: 97 TLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGD 156
+ YN +I ++ G +++ R + +G D +TF +LK S + +V +
Sbjct: 125 DVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVKKVHG 184
Query: 157 L--------------GRIVHVQILKADVDVEK---------DDVLCTALTDSYVKNGRIA 193
L G + + D +K D VL AL + Y + R
Sbjct: 185 LAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFE 244
Query: 194 YARTVFDVMSEKNVISS----TSLISGYMNQGLFKDAECIFQKTVD----KDIVVFNAMI 245
A VF M E+ V S TS++S + G + I V DIVV NA+I
Sbjct: 245 DALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALI 304
Query: 246 EGYSKT----------------------------SECATR--SLEVYIDMQRLNFRPNIS 275
+ Y K+ C +L ++ M RP+I
Sbjct: 305 DMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIV 364
Query: 276 TFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIK----LGSALIDMYSKCGRVVDSRRV 331
T +++ C +A+ G+++ ++ + + ++L+DMY KCG + D+R V
Sbjct: 365 TLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMV 424
Query: 332 FDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGL 391
FD M K+ SW MI+GYG + AL++F M GV P+ +TF+ L AC+H+G
Sbjct: 425 FDSMRVKDSASWNIMINGYGVQSCGELALDMFSCM-CRAGVKPDEITFVGLLQACSHSGF 483
Query: 392 VDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALL 451
+++G ME Y + P +HYACV+D+LGRA +L +A+E + P N VW ++L
Sbjct: 484 LNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSIL 543
Query: 452 SSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGIS 511
SSCRLHGN ++A +A L +L G YV +SN A K++ V ++R+ M+++ +
Sbjct: 544 SSCRLHGNKDLALVAGKRLHELEPE-HCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVK 602
Query: 512 KDTACSWV 519
K CSW+
Sbjct: 603 KTPGCSWI 610
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 119/268 (44%), Gaps = 40/268 (14%)
Query: 35 LSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLR 94
+++ L + S +G++IH +KTG + +S L+ +Y K L A +F+ +
Sbjct: 265 ITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMD 324
Query: 95 DKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPL 154
++ L +N ++ + G + +L L R+L SG + D T + +L T GR +A L
Sbjct: 325 ERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLP----TCGR-LASL 379
Query: 155 GDLGRIVHVQILKADVDVEK--DDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTS 212
GR +H ++ + + K ++ + +L D YVK G + AR VFD M K+ S
Sbjct: 380 RQ-GREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSAS--- 435
Query: 213 LISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRP 272
+N MI GY S C +L+++ M R +P
Sbjct: 436 ----------------------------WNIMINGYGVQS-CGELALDMFSCMCRAGVKP 466
Query: 273 NISTFASIIGACSMVAAFEVGQQVQSQL 300
+ TF ++ ACS G+ +Q+
Sbjct: 467 DEITFVGLLQACSHSGFLNEGRNFLAQM 494
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 228 bits (581), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 137/462 (29%), Positives = 236/462 (51%), Gaps = 33/462 (7%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G +H ++KTGF N +S LL +Y+ C + Y +VF+D+ + A+ +I ++
Sbjct: 126 GSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVN 185
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
+ +++ R + +G K + +L A +++ G+ H
Sbjct: 186 NNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRC--KDIVT----GKWFH-------- 231
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
L D Y ++ ++ + NVI +TSLI Y G + A +F
Sbjct: 232 -----GFLQGLGFDPYFQS-KVGF-----------NVILATSLIDMYAKCGDLRTARYLF 274
Query: 231 QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAF 290
++ +V +N++I GYS+ + A +L +++DM L P+ TF S+I A +
Sbjct: 275 DGMPERTLVSWNSIITGYSQNGD-AEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCS 333
Query: 291 EVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGY 350
++GQ + + + KT F + AL++MY+K G +++ F+ + +K+ +WT +I G
Sbjct: 334 QLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGL 393
Query: 351 GKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKP 410
+G +EAL +FQ+MQ + P+ +T+L L AC+H GLV++G F M + + ++P
Sbjct: 394 ASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEP 453
Query: 411 RMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASEL 470
+EHY C+VD+L RAGR +A V MP +PN ++W ALL+ C +H N E+ S +
Sbjct: 454 TVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMV 513
Query: 471 FKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISK 512
+ G G YV LSN A A +W V +RE MK + + K
Sbjct: 514 AEPEELG-SGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDK 554
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 136/313 (43%), Gaps = 55/313 (17%)
Query: 50 SGQTIHSHILKTGFVP--------NTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAY 101
+G+ H + GF P N ++ L+ +Y KC LR AR +FD + ++TL ++
Sbjct: 226 TGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSW 285
Query: 102 NYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIV 161
N +I Y + G EE+L + +L G D TF +++AS + LG+ +
Sbjct: 286 NSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASM------IQGCSQLGQSI 339
Query: 162 HVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQG 221
H + K KD + AL + Y K G A+ F+ + +K+ I+ T +I G + G
Sbjct: 340 HAYVSKT--GFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHG 397
Query: 222 LFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASII 281
+A IFQ+ +K N P+ T+ ++
Sbjct: 398 HGNEALSIFQRMQEKG-------------------------------NATPDGITYLGVL 426
Query: 282 GACSMVAAFEVGQQVQSQLMK----TPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQ 337
ACS + E GQ+ +++ P H ++D+ S+ GR ++ R+ M
Sbjct: 427 YACSHIGLVEEGQRYFAEMRDLHGLEPTVEHY---GCMVDILSRAGRFEEAERLVKTMPV 483
Query: 338 K-NVFSWTSMIDG 349
K NV W ++++G
Sbjct: 484 KPNVNIWGALLNG 496
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 116/250 (46%), Gaps = 20/250 (8%)
Query: 226 AECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACS 285
A +F+ + ++N+MI GYS + ++L Y +M R + P+ TF ++ ACS
Sbjct: 60 ARSVFESIDCPSVYIWNSMIRGYSNSPN-PDKALIFYQEMLRKGYSPDYFTFPYVLKACS 118
Query: 286 MVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTS 345
+ + G V ++KT F ++ + + L+ MY CG V RVF+ + Q NV +W S
Sbjct: 119 GLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGS 178
Query: 346 MIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACA-----------HAGLVDK 394
+I G+ N +A+E F++MQ GV N + L AC H L
Sbjct: 179 LISGFVNNNRFSDAIEAFREMQ-SNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGL 237
Query: 395 GLE-IFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSS 453
G + FQS KV + ++D+ + G L A MPER W ++++
Sbjct: 238 GFDPYFQS-----KVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVS-WNSIITG 291
Query: 454 CRLHGNTEMA 463
+G+ E A
Sbjct: 292 YSQNGDAEEA 301
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 151/509 (29%), Positives = 254/509 (49%), Gaps = 69/509 (13%)
Query: 77 YLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLV-----RRLLVSGEKL 131
Y++ + + A+ +F D+ +K + + M+ Y + G V E+ L R ++ +
Sbjct: 210 YIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMI 269
Query: 132 DGFTFSMILKAS-------------TSTSGRNVAPLG-----------DLGRIVHVQILK 167
GF ++ + + + S +G + L LG +H Q++
Sbjct: 270 SGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVIS 329
Query: 168 ADVD-VEKDDVL-----------------------------CTALTDSYVKNGRIAYART 197
+ V+ D L C + + Y+KNG + A T
Sbjct: 330 NGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAET 389
Query: 198 VFD-VMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECAT 256
+F+ V S + +S TS+I GY+ G A +FQK DKD V + MI G + +E
Sbjct: 390 LFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQ-NELFA 448
Query: 257 RSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTP--FFGHIKLGSA 314
+ + DM R +P ST++ ++ + + + G+ + + KT + + L ++
Sbjct: 449 EAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNS 508
Query: 315 LIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVP 374
L+ MY+KCG + D+ +F M QK+ SW SMI G +G D+AL LF++M ++ G P
Sbjct: 509 LVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEM-LDSGKKP 567
Query: 375 NFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEF 434
N VTFL LSAC+H+GL+ +GLE+F++M+ Y ++P ++HY ++DLLGRAG+L +A EF
Sbjct: 568 NSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEF 627
Query: 435 VMRMPERPNSDVWAALLSSCRLHGNTE----MAKLAASELFKLNANGRPGAYVALSNTLA 490
+ +P P+ V+ ALL C L+ + +A+ AA L +L+ PG +VAL N A
Sbjct: 628 ISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPG-HVALCNVYA 686
Query: 491 AAEKWDSVSELREVMKERGISKDTACSWV 519
+ D E+R+ M +G+ K CSWV
Sbjct: 687 GLGRHDMEKEMRKEMGIKGVKKTPGCSWV 715
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 190/442 (42%), Gaps = 69/442 (15%)
Query: 49 SSGQTIHS-HIL----KTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNY 103
S G +H+ H+L + G + LL Y K L AR +F+ + ++ + N
Sbjct: 54 SEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNA 113
Query: 104 MIGAYLKQGQVEESLGLVRRL---------LVSGEKLDGFTFSMILKASTSTSGRNVAPL 154
M+ Y+K ++ E+ L R + +++ DG + + + RNV
Sbjct: 114 MLTGYVKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAV-ELFDEMPERNVVSW 172
Query: 155 GDL--GRIVHVQILKA----DVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVI 208
L G I + + KA D +D V A+ Y++N + A+ +F MSEKNV+
Sbjct: 173 NTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVV 232
Query: 209 SSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQR- 267
+ TS++ GY G ++A +F + +++IV + AMI G++ +E +L ++++M++
Sbjct: 233 TWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFA-WNELYREALMLFLEMKKD 291
Query: 268 -LNFRPNISTFASIIGACSMVAA--FEVGQQVQSQLMKTPF--FGHI-KLGSALIDMYSK 321
PN T S+ AC + +G+Q+ +Q++ + H +L +L+ MY+
Sbjct: 292 VDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYAS 351
Query: 322 CGRVVDSRRVFDH--------------------------------MHQKNVFSWTSMIDG 349
G + ++ + + +H K SWTSMIDG
Sbjct: 352 SGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDK--VSWTSMIDG 409
Query: 350 YGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVK 409
Y + G A LFQK+ + G VT+ +S L + + M +K
Sbjct: 410 YLEAGDVSRAFGLFQKLHDKDG-----VTWTVMISGLVQNELFAEAASLLSDMV-RCGLK 463
Query: 410 PRMEHYACVVDLLGRAGRLNQA 431
P Y+ ++ G L+Q
Sbjct: 464 PLNSTYSVLLSSAGATSNLDQG 485
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 148/529 (27%), Positives = 264/529 (49%), Gaps = 81/529 (15%)
Query: 54 IHSHILKTGFVPN-TNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQG 112
IH+ ++ TG + N ++IS L+ + + YAR+VFD+L + +S YN MI Y +
Sbjct: 36 IHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGK 95
Query: 113 QVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDV 172
+E L L +++ + D TF+M +KA S + + G V + + D
Sbjct: 96 NPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLS------GLVLEKGEAVWCKAV--DFGY 147
Query: 173 EKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGY--------------- 217
+ D +C+++ + Y+K G++ A +F M++++VI T++++G+
Sbjct: 148 KNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYRE 207
Query: 218 -MNQGLFKDAEC-----------------------IFQKTVDKDIVVFNAMIEGYSKTS- 252
N+G +D +++ + ++VV ++++ Y+K
Sbjct: 208 MQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGF 267
Query: 253 -ECATR----------------------------SLEVYIDMQRLNFRPNISTFASIIGA 283
E A+R + E ++MQ L F+P++ T ++ A
Sbjct: 268 IEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVA 327
Query: 284 CSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSW 343
CS V + + G+ V ++K + +AL+DMYSKCG + SR +F+H+ +K++ W
Sbjct: 328 CSQVGSLKTGRLVHCYILKRHVLDRVT-ATALMDMYSKCGALSSSREIFEHVGRKDLVCW 386
Query: 344 TSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSME 403
+MI YG +G E + LF KM E + P+ TF S LSA +H+GLV++G F M
Sbjct: 387 NTMISCYGIHGNGQEVVSLFLKMT-ESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMI 445
Query: 404 NEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMA 463
N+YK++P +HY C++DLL RAGR+ +A + + +W ALLS C H N +
Sbjct: 446 NKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVG 505
Query: 464 KLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISK 512
+AA+++ +LN + G +SN A A KW V+++R++M+ + K
Sbjct: 506 DIAANKILQLNPDS-IGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEK 553
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 134/329 (40%), Gaps = 43/329 (13%)
Query: 23 LQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNC 82
+QN F ++ LQ + G+++H ++ +TG N + L+ +Y K
Sbjct: 208 MQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGF 267
Query: 83 LRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKA 142
+ A +VF + KT ++ +I + + G ++ V + G + D T +L A
Sbjct: 268 IEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVA 327
Query: 143 STSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVM 202
+ GR+VH ILK V D V TAL D Y K G ++ +R +F+ +
Sbjct: 328 CSQVGSLKT------GRLVHCYILKRHV---LDRVTATALMDMYSKCGALSSSREIFEHV 378
Query: 203 SEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVY 262
K+++ ++IS Y G ++ +F K
Sbjct: 379 GRKDLVCWNTMISCYGIHGNGQEVVSLFLK------------------------------ 408
Query: 263 IDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLM-KTPFFGHIKLGSALIDMYSK 321
M N P+ +TFAS++ A S E GQ S ++ K K LID+ ++
Sbjct: 409 --MTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLAR 466
Query: 322 CGRVVDSRRVFDHMHQKNVFS-WTSMIDG 349
GRV ++ + + N W +++ G
Sbjct: 467 AGRVEEALDMINSEKLDNALPIWVALLSG 495
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 152/366 (41%), Gaps = 53/366 (14%)
Query: 201 VMSEKNVISSTS----LISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECAT 256
V+S N+++ +S LI+ G A +F + + + V+N+MI YS+
Sbjct: 40 VISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKN-PD 98
Query: 257 RSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALI 316
L +Y M +P+ STF I AC E G+ V + + + + + S+++
Sbjct: 99 EVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVL 158
Query: 317 DMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIE------- 369
++Y KCG++ ++ +F M +++V WT+M+ G+ + G +A+E +++MQ E
Sbjct: 159 NLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRV 218
Query: 370 ---------------------------YGVVPNFVTFLSALSACAHAGLVDKGLEIFQSM 402
G+ N V S + A G ++ +F M
Sbjct: 219 VMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRM 278
Query: 403 ENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPE---RPNSDVWAALLSSCRLHGN 459
+ V + ++ + G N+A+E V+ M +P+ +L +C G+
Sbjct: 279 MFKTAVS-----WGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGS 333
Query: 460 TEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
+ +L + K + R V + + K ++S RE+ + G KD C W
Sbjct: 334 LKTGRLVHCYILKRHVLDR----VTATALMDMYSKCGALSSSREIFEHVG-RKDLVC-WN 387
Query: 520 GADSVY 525
S Y
Sbjct: 388 TMISCY 393
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 143/498 (28%), Positives = 248/498 (49%), Gaps = 53/498 (10%)
Query: 28 FVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYAR 87
F P+ + ++L+ + P G IH +K+ N L +Y +C L AR
Sbjct: 266 FHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSAR 325
Query: 88 QVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTS 147
+VFD + +++N +I G +E++ + ++ SG D + +L A T
Sbjct: 326 RVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTK-- 383
Query: 148 GRNVAPLG-DLGRIVHVQILK----ADVDVEKDDVLCTALTDSYVKNGRIAYARTVF-DV 201
P+ G +H I+K AD+ V C +L Y + +F D
Sbjct: 384 -----PMALSQGMQIHSYIIKWGFLADLTV------CNSLLTMYTFCSDLYCCFNLFEDF 432
Query: 202 MSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEV 261
+ + +S ++++ C+ + + + +F M+ SEC
Sbjct: 433 RNNADSVSWNTILTA-----------CLQHEQPVEMLRLFKLML-----VSEC------- 469
Query: 262 YIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSK 321
P+ T +++ C +++ ++G QV +KT + + LIDMY+K
Sbjct: 470 ---------EPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAK 520
Query: 322 CGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLS 381
CG + +RR+FD M ++V SW+++I GY ++GF +EAL LF++M+ G+ PN VTF+
Sbjct: 521 CGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMK-SAGIEPNHVTFVG 579
Query: 382 ALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPER 441
L+AC+H GLV++GL+++ +M+ E+ + P EH +CVVDLL RAGRLN+A F+ M
Sbjct: 580 VLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLE 639
Query: 442 PNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSEL 501
P+ VW LLS+C+ GN +A+ AA + K++ A+V L + A++ W++ + L
Sbjct: 640 PDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNST-AHVLLCSMHASSGNWENAALL 698
Query: 502 REVMKERGISKDTACSWV 519
R MK+ + K SW+
Sbjct: 699 RSSMKKHDVKKIPGQSWI 716
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 184/383 (48%), Gaps = 47/383 (12%)
Query: 23 LQNHDFVPHSTLLSNTLQYYIN-------SDTPSSGQTIHSHILKTGFVPNTNISIKLLV 75
L+ DF ++ L+ YI+ S + + G+ IH HIL + +T ++ +L
Sbjct: 51 LEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILS 110
Query: 76 LYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFT 135
+Y KC LR AR+VFD + ++ L +Y +I Y + GQ E++ L ++L D F
Sbjct: 111 MYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFA 170
Query: 136 FSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYA 195
F I+KA S+S LG+ +H Q++K ++ + AL YV+ +++ A
Sbjct: 171 FGSIIKACASSSDVG------LGKQLHAQVIK--LESSSHLIAQNALIAMYVRFNQMSDA 222
Query: 196 RTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECA 255
VF + K++IS +S+I+G+ G +A K+++ F
Sbjct: 223 SRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHL-----KEMLSFGV------------ 265
Query: 256 TRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSAL 315
F PN F S + ACS + + G Q+ +K+ G+ G +L
Sbjct: 266 --------------FHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSL 311
Query: 316 IDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPN 375
DMY++CG + +RRVFD + + + SW +I G NG+ DEA+ +F +M+ G +P+
Sbjct: 312 CDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMR-SSGFIPD 370
Query: 376 FVTFLSALSACAHAGLVDKGLEI 398
++ S L A + +G++I
Sbjct: 371 AISLRSLLCAQTKPMALSQGMQI 393
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 159/318 (50%), Gaps = 20/318 (6%)
Query: 192 IAYARTVFDVMSEKN----VISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEG 247
+A R + D + N I + ++S Y G +DA +F ++++V + ++I G
Sbjct: 83 LAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITG 142
Query: 248 YSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFG 307
YS+ + A ++ +Y+ M + + P+ F SII AC+ + +G+Q+ +Q++K
Sbjct: 143 YSQNGQGA-EAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSS 201
Query: 308 HIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQ 367
H+ +ALI MY + ++ D+ RVF + K++ SW+S+I G+ + GF EAL ++M
Sbjct: 202 HLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEM- 260
Query: 368 IEYGVV-PNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYA----CVVDLL 422
+ +GV PN F S+L AC+ D G +I + +K + A + D+
Sbjct: 261 LSFGVFHPNEYIFGSSLKACSSLLRPDYGSQI-----HGLCIKSELAGNAIAGCSLCDMY 315
Query: 423 GRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAY 482
R G LN A V ERP++ W +++ N A A S ++ ++G
Sbjct: 316 ARCGFLNSARR-VFDQIERPDTASWNVIIAGL---ANNGYADEAVSVFSQMRSSGFIPDA 371
Query: 483 VALSNTLAAAEKWDSVSE 500
++L + L A K ++S+
Sbjct: 372 ISLRSLLCAQTKPMALSQ 389
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 148/338 (43%), Gaps = 49/338 (14%)
Query: 23 LQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNC 82
+++ F+P + L + L S G IHS+I+K GF+ + + LL +Y C+
Sbjct: 362 MRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSD 421
Query: 83 LRYARQVFDDLRDKTLS-AYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILK 141
L +F+D R+ S ++N ++ A L+ Q E L L + +LVS + D T +L+
Sbjct: 422 LYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLR 481
Query: 142 ASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDV 201
S LG VH LK + E+ + L D Y K G + AR +FD
Sbjct: 482 GCVEISSLK------LGSQVHCYSLKTGLAPEQ--FIKNGLIDMYAKCGSLGQARRIFDS 533
Query: 202 MSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEV 261
M ++D+V ++ +I GY++ S +L +
Sbjct: 534 MD-------------------------------NRDVVSWSTLIVGYAQ-SGFGEEALIL 561
Query: 262 YIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQV----QSQLMKTPFFGHIKLGSALID 317
+ +M+ PN TF ++ ACS V E G ++ Q++ +P H S ++D
Sbjct: 562 FKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHC---SCVVD 618
Query: 318 MYSKCGRVVDSRRVFDHMH-QKNVFSWTSMIDGYGKNG 354
+ ++ GR+ ++ R D M + +V W +++ G
Sbjct: 619 LLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQG 656
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 140/471 (29%), Positives = 241/471 (51%), Gaps = 43/471 (9%)
Query: 49 SSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAY 108
S + +H H +K V ++ +S L+ Y + C++ A +F+ + L A+N M+ Y
Sbjct: 434 SLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGY 492
Query: 109 LKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKA 168
+ ++L L + GE+ D FT + + K T G A + G+ VH +K+
Sbjct: 493 TQSHDGHKTLKLFALMHKQGERSDDFTLATVFK----TCGFLFAI--NQGKQVHAYAIKS 546
Query: 169 DVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAEC 228
D+ D + + + D YVK G ++ A+ FD + + ++ T++ISG + G
Sbjct: 547 GYDL--DLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGE------ 598
Query: 229 IFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVA 288
R+ V+ M+ + P+ T A++ A S +
Sbjct: 599 --------------------------EERAFHVFSQMRLMGVLPDEFTIATLAKASSCLT 632
Query: 289 AFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMID 348
A E G+Q+ + +K +G++L+DMY+KCG + D+ +F + N+ +W +M+
Sbjct: 633 ALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLV 692
Query: 349 GYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKV 408
G ++G E L+LF++M+ G+ P+ VTF+ LSAC+H+GLV + + +SM +Y +
Sbjct: 693 GLAQHGEGKETLQLFKQMK-SLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGI 751
Query: 409 KPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAAS 468
KP +EHY+C+ D LGRAG + QA + M ++ ++ LL++CR+ G+TE K A+
Sbjct: 752 KPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVAT 811
Query: 469 ELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
+L +L AYV LSN AAA KWD + R +MK + KD SW+
Sbjct: 812 KLLELEPLD-SSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWI 861
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 203/419 (48%), Gaps = 49/419 (11%)
Query: 43 INSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYN 102
+ D+ + GQ +H LK G +S L+ +Y K +AR VFD++ ++ L ++N
Sbjct: 326 VKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWN 385
Query: 103 YMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLG-DLGRIV 161
+I + G E++ L +LL G K D +T + +LKA++S P G L + V
Sbjct: 386 SVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSL------PEGLSLSKQV 439
Query: 162 HVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQG 221
HV +K + ++DS+V ST+LI Y
Sbjct: 440 HVHAIKIN-----------NVSDSFV----------------------STALIDAYSRNR 466
Query: 222 LFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASII 281
K+AE +F++ + D+V +NAM+ GY+++ + ++L+++ M + R + T A++
Sbjct: 467 CMKEAEILFERH-NFDLVAWNAMMAGYTQSHD-GHKTLKLFALMHKQGERSDDFTLATVF 524
Query: 282 GACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVF 341
C + A G+QV + +K+ + + + S ++DMY KCG + ++ FD + +
Sbjct: 525 KTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDV 584
Query: 342 SWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQS 401
+WT+MI G +NG + A +F +M++ GV+P+ T + A + +++G +I
Sbjct: 585 AWTTMISGCIENGEEERAFHVFSQMRL-MGVLPDEFTIATLAKASSCLTALEQGRQIHA- 642
Query: 402 MENEYKVKPRMEHY--ACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHG 458
N K+ + + +VD+ + G ++ A+ R+ E N W A+L HG
Sbjct: 643 --NALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRI-EMMNITAWNAMLVGLAQHG 698
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 168/395 (42%), Gaps = 59/395 (14%)
Query: 39 LQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTL 98
L+ I S G+ H+ IL P + L+ +Y KC L YAR+VFD + D+ L
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 99 SAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLG 158
++N ++ AY + + +V + F ++ + TS ++P+ L
Sbjct: 106 VSWNSILAAYAQSSEC----------VVENIQQAFLLFRILRQDVVYTSRMTLSPM--LK 153
Query: 159 RIVHVQILKAD---------VDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVIS 209
+H + A + ++ D+ + AL + Y+K G++ + +F+ M ++V+
Sbjct: 154 LCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVL 213
Query: 210 STSLISGYMNQGLFKDA---ECIFQKTV-----------------DKDIVVFNAMIEG-- 247
++ Y+ G ++A F + D D + G
Sbjct: 214 WNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGND 273
Query: 248 YSKTSECATRS---------------LEVYIDMQRLNFRPNISTFASIIGACSMVAAFEV 292
S SE R+ L+ + DM + + TF ++ V + +
Sbjct: 274 ASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLAL 333
Query: 293 GQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGK 352
GQQV +K + + ++LI+MY K + +R VFD+M ++++ SW S+I G +
Sbjct: 334 GQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQ 393
Query: 353 NGFPDEALELFQKMQIEYGVVPNFVTFLSALSACA 387
NG EA+ LF ++ + G+ P+ T S L A +
Sbjct: 394 NGLEVEAVCLFMQL-LRCGLKPDQYTMTSVLKAAS 427
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/465 (20%), Positives = 204/465 (43%), Gaps = 46/465 (9%)
Query: 35 LSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLR 94
LS L+ ++S + ++ H + K G + ++ L+ +YLK ++ + +F+++
Sbjct: 148 LSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMP 207
Query: 95 DKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTS------- 147
+ + +N M+ AYL+ G EE++ L SG + T ++ + S S
Sbjct: 208 YRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKS 267
Query: 148 ---GRNVAPLGD-------LGRIVH----VQILKADVDVEKDDVLCTALT-----DSYVK 188
G + + + + L +H +LK D+ + DV C +T + VK
Sbjct: 268 FANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVK 327
Query: 189 NGRIAYARTV--------FDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVV 240
+A + V D+M + S SLI+ Y F A +F ++D++
Sbjct: 328 VDSLALGQQVHCMALKLGLDLM----LTVSNSLINMYCKLRKFGFARTVFDNMSERDLIS 383
Query: 241 FNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASII-GACSMVAAFEVGQQVQSQ 299
+N++I G ++ ++ +++ + R +P+ T S++ A S+ + +QV
Sbjct: 384 WNSVIAGIAQNG-LEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVH 442
Query: 300 LMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEA 359
+K + +ALID YS+ R + + H ++ +W +M+ GY ++ +
Sbjct: 443 AIKINNVSDSFVSTALIDAYSR-NRCMKEAEILFERHNFDLVAWNAMMAGYTQSHDGHKT 501
Query: 360 LELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQ-SMENEYKVKPRMEHYACV 418
L+LF M + G + T + C +++G ++ ++++ Y + + + +
Sbjct: 502 LKLFALMH-KQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS--SGI 558
Query: 419 VDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMA 463
+D+ + G ++ A +F P+ W ++S C +G E A
Sbjct: 559 LDMYVKCGDMSAA-QFAFDSIPVPDDVAWTTMISGCIENGEEERA 602
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 170/548 (31%), Positives = 265/548 (48%), Gaps = 69/548 (12%)
Query: 35 LSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLR 94
S L+ I+ + S +TI +H+LK+GF P KL+ LKC + YARQVFD +
Sbjct: 68 FSQLLRQCIDERSISGIKTIQAHMLKSGF-PAEISGSKLVDASLKCGDIDYARQVFDGMS 126
Query: 95 DKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPL 154
++ + +N +I +K + +E++ + R ++ + D +T S + KA + S A
Sbjct: 127 ERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQR 186
Query: 155 GD-----LG-RIVHVQILKADVDV------------------EKDDVLCTALTDSYVKNG 190
LG + +V + A VD+ EKD VL TAL Y + G
Sbjct: 187 SHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKG 246
Query: 191 RIAYARTVFDVMS---------------------------------------EKNVISST 211
A F M E + S T
Sbjct: 247 EDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQT 306
Query: 212 SLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFR 271
SL++ Y+ L D+ +F+ + V + ++I G + +E + M R + +
Sbjct: 307 SLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIE-FRKMMRDSIK 365
Query: 272 PNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRV 331
PN T +S + CS +A FE G+Q+ + K F GS LID+Y KCG +R V
Sbjct: 366 PNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLV 425
Query: 332 FDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGL 391
FD + + +V S +MI Y +NGF EAL+LF++M I G+ PN VT LS L AC ++ L
Sbjct: 426 FDTLSEVDVISLNTMIYSYAQNGFGREALDLFERM-INLGLQPNDVTVLSVLLACNNSRL 484
Query: 392 VDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALL 451
V++G E+F S + K+ +HYAC+VDLLGRAGRL +A E + P+ +W LL
Sbjct: 485 VEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLL 542
Query: 452 SSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGIS 511
S+C++H EMA+ ++ ++ G G + +SN A+ KW+ V E++ MK+ +
Sbjct: 543 SACKVHRKVEMAERITRKILEIEP-GDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLK 601
Query: 512 KDTACSWV 519
K+ A SWV
Sbjct: 602 KNPAMSWV 609
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%)
Query: 30 PHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQV 89
P+S LS+ L+ N G+ IH + K GF + L+ LY KC C AR V
Sbjct: 366 PNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLV 425
Query: 90 FDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTST 146
FD L + + + N MI +Y + G E+L L R++ G + + T +L A ++
Sbjct: 426 FDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNS 482
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 146/476 (30%), Positives = 254/476 (53%), Gaps = 18/476 (3%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLKCNC-LRYARQVFDDLRDKTLSAYNYMIGAYLK 110
+ IH+ ++KTG + +T + ++L + YA VF + K +N +I + +
Sbjct: 42 KQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSR 101
Query: 111 QGQVEESLGLVRRLLVSGE--KLDGFTFSMILKASTSTSGRNVAPLGDL--GRIVHVQIL 166
E ++ + +L S K T+ + KA GR LG GR +H ++
Sbjct: 102 SSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAY----GR----LGQARDGRQLHGMVI 153
Query: 167 KADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDA 226
K + E D + + YV G + A +F M +V++ S+I G+ GL A
Sbjct: 154 KEGL--EDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQA 211
Query: 227 ECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSM 286
+ +F + ++ V +N+MI G+ + +L+++ +MQ + +P+ T S++ AC+
Sbjct: 212 QNLFDEMPQRNGVSWNSMISGFVRNGR-FKDALDMFREMQEKDVKPDGFTMVSLLNACAY 270
Query: 287 VAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSM 346
+ A E G+ + +++ F + + +ALIDMY KCG + + VF+ +K + W SM
Sbjct: 271 LGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSM 330
Query: 347 IDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEY 406
I G NGF + A++LF +++ G+ P+ V+F+ L+ACAH+G V + E F+ M+ +Y
Sbjct: 331 ILGLANNGFEERAMDLFSELE-RSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKY 389
Query: 407 KVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLA 466
++P ++HY +V++LG AG L +A + MP ++ +W++LLS+CR GN EMAK A
Sbjct: 390 MIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRA 449
Query: 467 ASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWVGAD 522
A L KL+ + G YV LSN A+ ++ E R +MKER + K+ CS + D
Sbjct: 450 AKCLKKLDPDETCG-YVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVD 504
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/387 (20%), Positives = 155/387 (40%), Gaps = 58/387 (14%)
Query: 30 PHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCL------ 83
P + + Y G+ +H ++K G ++ I +L +Y+ C CL
Sbjct: 124 PQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRI 183
Query: 84 -------------------------RYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESL 118
A+ +FD++ + ++N MI +++ G+ +++L
Sbjct: 184 FLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDAL 243
Query: 119 GLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLG--DLGRIVHVQILKADVDVEKDD 176
+ R + K DGFT +L A A LG + GR +H I++ ++ +
Sbjct: 244 DMFREMQEKDVKPDGFTMVSLLNA--------CAYLGASEQGRWIHEYIVRNRFEL--NS 293
Query: 177 VLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKT--- 233
++ TAL D Y K G I VF+ +K + S+I G N G + A +F +
Sbjct: 294 IVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERS 353
Query: 234 -VDKDIVVFNAMIEGYSKTSECATRSLEVYIDM-QRLNFRPNISTFASIIGACSMVAAFE 291
++ D V F ++ + + E R+ E + M ++ P+I + ++ E
Sbjct: 354 GLEPDSVSFIGVLTACAHSGE-VHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLE 412
Query: 292 VGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRV---FDHMHQKNVFSWTSMID 348
+ ++ + P + S+L+ K G V ++R + + + +
Sbjct: 413 ---EAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSN 469
Query: 349 GYGKNGFPDEALE---LFQKMQIEYGV 372
Y G +EA+E L ++ Q+E V
Sbjct: 470 AYASYGLFEEAVEQRLLMKERQMEKEV 496
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 92/232 (39%), Gaps = 28/232 (12%)
Query: 23 LQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNC 82
+Q D P + + L G+ IH +I++ F N+ + L+ +Y KC C
Sbjct: 249 MQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGC 308
Query: 83 LRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKA 142
+ VF+ K LS +N MI G E ++ L L SG + D +F +L A
Sbjct: 309 IEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTA 368
Query: 143 STSTSGRNVAP-------------------------LGDLGRIVHVQILKADVDVEKDDV 177
+ + A LG G + + L ++ VE+D V
Sbjct: 369 CAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTV 428
Query: 178 LCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLI---SGYMNQGLFKDA 226
+ ++L + K G + A+ + + + + + + Y + GLF++A
Sbjct: 429 IWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEA 480
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 225 bits (573), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 153/549 (27%), Positives = 267/549 (48%), Gaps = 90/549 (16%)
Query: 48 PSSGQTIHSHILKTG-FVPNTNISI---------KLLVLYLKCNCLRYARQVFDDLRDKT 97
P G +H+ I+K F + I LL LY KC L A ++FD++ +
Sbjct: 61 PHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRD 120
Query: 98 LSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDL 157
+ + N + +L+ + E L++R+L SG D T +++L + +
Sbjct: 121 VISQNIVFYGFLRNRETESGFVLLKRMLGSG-GFDHATLTIVLSVC------DTPEFCLV 173
Query: 158 GRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGY 217
+++H + + D K+ + L SY K G R VFD MS +NVI+ T++ISG
Sbjct: 174 TKMIHALAILSGYD--KEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGL 231
Query: 218 MNQGLFKD------------------------AEC---------------IFQKTVDKDI 238
+ L +D A C +++ ++ ++
Sbjct: 232 IENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESEL 291
Query: 239 VVFNAMIEGYSK-------------TSECATRSLEV-----------------YIDMQRL 268
+ +A+++ YSK T+E S+ V +I M +
Sbjct: 292 CIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQA 351
Query: 269 NFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDS 328
+ + ++++G + + +G+Q+ S ++K F G+ + + LI+MYSKCG + DS
Sbjct: 352 GVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDS 411
Query: 329 RRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAH 388
+ VF M ++N SW SMI + ++G AL+L+++M V P VTFLS L AC+H
Sbjct: 412 QTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTT-LEVKPTDVTFLSLLHACSH 470
Query: 389 AGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWA 448
GL+DKG E+ M+ + ++PR EHY C++D+LGRAG L +A F+ +P +P+ +W
Sbjct: 471 VGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQ 530
Query: 449 ALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKER 508
ALL +C HG+TE+ + AA +LF+ A A++ ++N ++ KW ++ + MK
Sbjct: 531 ALLGACSFHGDTEVGEYAAEQLFQ-TAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAM 589
Query: 509 GISKDTACS 517
G++K+T S
Sbjct: 590 GVTKETGIS 598
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 130/313 (41%), Gaps = 47/313 (15%)
Query: 30 PHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQV 89
P+S + L S GQ IH+ + K G I L+ +Y KC + A +
Sbjct: 254 PNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTI 313
Query: 90 FDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGR 149
F+ + + ++ + G EE++ R+L +G ++D S +L S +
Sbjct: 314 FESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNS- 372
Query: 150 NVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVIS 209
LG LG+ +H ++K + + L + Y K G + ++TVF M ++N +S
Sbjct: 373 ----LG-LGKQLHSLVIKRKFS--GNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVS 425
Query: 210 STSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLN 269
S+I+ + G G + +L++Y +M L
Sbjct: 426 WNSMIAAFARHG------------------------HGLA--------ALKLYEEMTTLE 453
Query: 270 FRPNISTFASIIGACSMVAAFEVGQQVQSQLMKT----PFFGHIKLGSALIDMYSKCGRV 325
+P TF S++ ACS V + G+++ +++ + P H + +IDM + G +
Sbjct: 454 VKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHY---TCIIDMLGRAGLL 510
Query: 326 VDSRRVFDHMHQK 338
+++ D + K
Sbjct: 511 KEAKSFIDSLPLK 523
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 224 bits (572), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 147/491 (29%), Positives = 243/491 (49%), Gaps = 45/491 (9%)
Query: 23 LQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNC 82
+QN P ++S + G+ H +++ F ++ + LL +Y K
Sbjct: 322 MQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFEL 381
Query: 83 LRYARQVFDDLRDK-TLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILK 141
L A ++F + ++ A+N M+ Y K + + L R++ G ++D + + ++
Sbjct: 382 LSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVI- 440
Query: 142 ASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDV 201
+S S G + LG+ +H ++K +D+ V +L D Y K G + A +F
Sbjct: 441 SSCSHIGAVL-----LGKSLHCYVVKTSLDLTISVV--NSLIDLYGKMGDLTVAWRMF-- 491
Query: 202 MSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEV 261
C D +++ +NAMI Y + + +++ +
Sbjct: 492 --------------------------C----EADTNVITWNAMIASYVHCEQ-SEKAIAL 520
Query: 262 YIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSK 321
+ M NF+P+ T +++ AC + E GQ + + +T ++ L +ALIDMY+K
Sbjct: 521 FDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAK 580
Query: 322 CGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLS 381
CG + SR +FD +QK+ W MI GYG +G + A+ LF +M+ E V P TFL+
Sbjct: 581 CGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQME-ESDVKPTGPTFLA 639
Query: 382 ALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPER 441
LSAC HAGLV++G ++F M ++Y VKP ++HY+C+VDLL R+G L +A VM MP
Sbjct: 640 LLSACTHAGLVEQGKKLFLKM-HQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFS 698
Query: 442 PNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSEL 501
P+ +W LLSSC HG EM A + G Y+ L+N +AA KW+
Sbjct: 699 PDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQ-NDGYYIMLANMYSAAGKWEEAERA 757
Query: 502 REVMKERGISK 512
RE+M+E G+ K
Sbjct: 758 REMMRESGVGK 768
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 164/425 (38%), Gaps = 67/425 (15%)
Query: 43 INSDTPSSGQTIHSH---ILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLS 99
I D S +++ H I+ G N ++ KL+ Y + +VF + + +
Sbjct: 32 ILCDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIF 91
Query: 100 AYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGR 159
+N +I A+ G SL +L+SG+ D FT M++ A +V G
Sbjct: 92 LWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHV------GT 145
Query: 160 IVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMN 219
VH +LK FD +N S + Y
Sbjct: 146 FVHGLVLK----------------------------HGGFD----RNTAVGASFVYFYSK 173
Query: 220 QGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSE--------CATRSLEVYIDMQRLNFR 271
G +DA +F + D+D+V + A+I G+ + E C S +D +
Sbjct: 174 CGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVD------K 227
Query: 272 PNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRV 331
PN T ACS + A + G+ + +K + S++ YSK G ++
Sbjct: 228 PNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLS 287
Query: 332 FDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGL 391
F + +++FSWTS+I ++G +E+ ++F +MQ G+ P+ V ++ L
Sbjct: 288 FRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQ-NKGMHPDGVVISCLINELGKMML 346
Query: 392 VDK-----GLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDV 446
V + G I + V + C +LL A +L R+ E N +
Sbjct: 347 VPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKL------FCRISEEGNKEA 400
Query: 447 WAALL 451
W +L
Sbjct: 401 WNTML 405
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 224 bits (572), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 120/360 (33%), Positives = 204/360 (56%), Gaps = 13/360 (3%)
Query: 169 DVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAEC 228
D+ E+D VL + Y++ G + AR++FD M ++V+S +++ GY N G + E
Sbjct: 83 DLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACER 142
Query: 229 IFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRL----NFRPNISTFASIIGAC 284
+F ++++ +N +I+GY++ R EV +R+ + PN +T ++ AC
Sbjct: 143 VFDDMPERNVFSWNGLIKGYAQNG----RVSEVLGSFKRMVDEGSVVPNDATMTLVLSAC 198
Query: 285 SMVAAFEVGQQVQSQLMKTPFFGHIKLG--SALIDMYSKCGRVVDSRRVFDHMHQKNVFS 342
+ + AF+ G+ V + +T + + + +ALIDMY KCG + + VF + ++++ S
Sbjct: 199 AKLGAFDFGKWVH-KYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLIS 257
Query: 343 WTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSM 402
W +MI+G +G EAL LF +M+ G+ P+ VTF+ L AC H GLV+ GL F SM
Sbjct: 258 WNTMINGLAAHGHGTEALNLFHEMK-NSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSM 316
Query: 403 ENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEM 462
++ + P +EH CVVDLL RAG L QA EF+ +MP + ++ +WA LL + +++ ++
Sbjct: 317 FTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDI 376
Query: 463 AKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWVGAD 522
++A EL KL P +V LSN A ++D + L+ M++ G K+ SW+ D
Sbjct: 377 GEVALEELIKLEPR-NPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETD 435
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 115/241 (47%), Gaps = 14/241 (5%)
Query: 221 GLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASI 280
G+ A +F + V+K++V++ +MI GY + S Y D+ S I
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLV--SARRYFDL---------SPERDI 90
Query: 281 IGACSMVAAF-EVGQQVQSQ-LMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQK 338
+ +M++ + E+G ++++ L + + +++ Y+ G + RVFD M ++
Sbjct: 91 VLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPER 150
Query: 339 NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEI 398
NVFSW +I GY +NG E L F++M E VVPN T LSACA G D G +
Sbjct: 151 NVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWV 210
Query: 399 FQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHG 458
+ E K + ++D+ G+ G + A E V + +R + W +++ HG
Sbjct: 211 HKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAME-VFKGIKRRDLISWNTMINGLAAHG 269
Query: 459 N 459
+
Sbjct: 270 H 270
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 145/364 (39%), Gaps = 92/364 (25%)
Query: 77 YLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKL-DGFT 135
Y + +VFDD+ ++ + ++N +I Y + G+V E LG +R++ G + + T
Sbjct: 131 YANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDAT 190
Query: 136 FSMILKASTSTSGRNVAPLG--DLGRIVH-----VQILKADVDVEKDDVLCTALTDSYVK 188
+++L A A LG D G+ VH + K DV+V+ AL D Y K
Sbjct: 191 MTLVLSAC--------AKLGAFDFGKWVHKYGETLGYNKVDVNVK------NALIDMYGK 236
Query: 189 NGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGY 248
G I A VF + +++IS ++I+G G
Sbjct: 237 CGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGH-------------------------- 270
Query: 249 SKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGH 308
T +L ++ +M+ P+ TF ++ AC + E G +F
Sbjct: 271 ------GTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDG---------LAYFNS 315
Query: 309 IKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQI 368
+ +++ CG VVD + GF +A+E KM +
Sbjct: 316 MFTDFSIMPEIEHCGCVVDL---------------------LSRAGFLTQAVEFINKMPV 354
Query: 369 EYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRM-EHYACVVDLLGRAGR 427
+ + V + + L A VD G E+ ++E K++PR ++ + ++ G AGR
Sbjct: 355 K----ADAVIWATLLGASKVYKKVDIG-EV--ALEELIKLEPRNPANFVMLSNIYGDAGR 407
Query: 428 LNQA 431
+ A
Sbjct: 408 FDDA 411
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 145/505 (28%), Positives = 256/505 (50%), Gaps = 42/505 (8%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQ 111
+ H+ +++ G N ++ +LL LY K + A +F ++ + ++N MI + ++
Sbjct: 178 RAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQE 237
Query: 112 GQVEESLGLVRRLLVSGEKLDGFTFSMILK--------------------ASTSTSGRNV 151
E ++ + + K D T++ +L + + SG +
Sbjct: 238 YDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEAL 297
Query: 152 APLGD---------LGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVM 202
A + VH ++K + AL Y K G++ A +F +
Sbjct: 298 AVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSR--NALIHVYGKQGKVKDAEHLFRQI 355
Query: 203 SEKNVISSTSLISGYMNQGLFKDAECIFQK--------TVDKDIVVFNAMIEGYSKTSEC 254
K + S SLI+ +++ G +A +F + V ++V + ++I+G +
Sbjct: 356 RNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGR- 414
Query: 255 ATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSA 314
SLE + MQ N T I+ C+ + A +G+++ +++T +I + +A
Sbjct: 415 GDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNA 474
Query: 315 LIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVP 374
L++MY+KCG + + VF+ + K++ SW S+I GYG +GF ++AL +F +M I G P
Sbjct: 475 LVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRM-ISSGFHP 533
Query: 375 NFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEF 434
+ + ++ LSAC+HAGLV+KG EIF SM + ++P+ EHYAC+VDLLGR G L +A E
Sbjct: 534 DGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEI 593
Query: 435 VMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEK 494
V MP P V ALL+SCR+H N ++A+ AS+L L R G+Y+ LSN +A +
Sbjct: 594 VKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPE-RTGSYMLLSNIYSAGGR 652
Query: 495 WDSVSELREVMKERGISKDTACSWV 519
W+ + +R + K++ + K + SW+
Sbjct: 653 WEESANVRALAKKKDLKKVSGSSWI 677
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 190/421 (45%), Gaps = 26/421 (6%)
Query: 47 TPSSGQTIHSHILKTGFVPNT-NISIKLLVLYLKCNCLRYARQVFDDLRDKTLS---AYN 102
T + +H+ +L + F+ + +++ L+ +Y + L AR VF+ + LS +N
Sbjct: 68 TAQQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWN 127
Query: 103 YMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVH 162
++ A + G E +L L R + G DG+ +IL+A R + G L R H
Sbjct: 128 SILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRAC-----RYLGRFG-LCRAFH 181
Query: 163 VQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGL 222
Q+++ + ++++ + L Y K GR+ A +F M +N +S +I G+ +
Sbjct: 182 TQVIQ--IGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYD 239
Query: 223 FKDAECIFQ----KTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRP-NISTF 277
+ A IF+ + D V + +++ +S+ + + Y + R++ +
Sbjct: 240 CESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGK--FEDVLKYFHLMRMSGNAVSGEAL 297
Query: 278 ASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQ 337
A C+ + A + ++V ++K F ++ +ALI +Y K G+V D+ +F +
Sbjct: 298 AVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRN 357
Query: 338 KNVFSWTSMIDGYGKNGFPDEALELF---QKMQIEYGVVPNFVTFLSALSACAHAGLVDK 394
K + SW S+I + G DEAL LF ++M V N VT+ S + C G D
Sbjct: 358 KGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDD 417
Query: 395 GLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEF---VMRMPERPNSDVWAALL 451
LE F+ M+ KV C++ + LN E V+R N V AL+
Sbjct: 418 SLEYFRQMQFS-KVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALV 476
Query: 452 S 452
+
Sbjct: 477 N 477
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ IH H+++T N + L+ +Y KC L VF+ +RDK L ++N +I Y
Sbjct: 453 GREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGM 512
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKAST 144
G E++L + R++ SG DG +L A +
Sbjct: 513 HGFAEKALSMFDRMISSGFHPDGIALVAVLSACS 546
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 96/209 (45%), Gaps = 12/209 (5%)
Query: 248 YSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPF-F 306
Y+ S T S+ Y + N + F ++G C + +QV +Q++ + F F
Sbjct: 30 YTSISSPDTVSVSSYYSLTSNNDQSLFHYFDHLLGLCLTA---QQCRQVHAQVLLSDFIF 86
Query: 307 GHIKLGSALIDMYSKCGRVVDSRRVFDHMH---QKNVFSWTSMIDGYGKNGFPDEALELF 363
L + LI +Y++ G ++D+R VF+ + ++ W S++ +G + ALEL+
Sbjct: 87 RSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELY 146
Query: 364 QKMQIEYGVVPNFVTFLSALSACAHAGLVDKGL-EIFQSMENEYKVKPRMEHYACVVDLL 422
+ M+ + G+ + L AC + G GL F + + +K + ++ L
Sbjct: 147 RGMR-QRGLTGDGYILPLILRACRYLGRF--GLCRAFHTQVIQIGLKENLHVVNELLTLY 203
Query: 423 GRAGRLNQAWEFVMRMPERPNSDVWAALL 451
+AGR+ A+ + MP R N W ++
Sbjct: 204 PKAGRMGDAYNLFVEMPVR-NRMSWNVMI 231
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 139/432 (32%), Positives = 233/432 (53%), Gaps = 8/432 (1%)
Query: 94 RDKTLSAYNYMIGAYLKQGQVEESLGLVRRLL-VSGEKLDGFTFSMILKASTSTSGRNVA 152
R+ + AYN +I Y ++GQVE + L ++ + G+ G K S + A
Sbjct: 231 REDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKA 290
Query: 153 PLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTS 212
L +G +V ++L D ++D + + D YV R+ A +F M ++ S
Sbjct: 291 YL-KVGDVVSARLL-FDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNM 348
Query: 213 LISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRP 272
++SGY + G + A F+KT +K V +N++I Y K + +++++I M +P
Sbjct: 349 MVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKD-YKEAVDLFIRMNIEGEKP 407
Query: 273 NISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVF 332
+ T S++ A + + +G Q+ ++KT + + +ALI MYS+CG +++SRR+F
Sbjct: 408 DPHTLTSLLSASTGLVNLRLGMQMHQIVVKT-VIPDVPVHNALITMYSRCGEIMESRRIF 466
Query: 333 DHMH-QKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGL 391
D M ++ V +W +MI GY +G EAL LF M+ G+ P+ +TF+S L+ACAHAGL
Sbjct: 467 DEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMK-SNGIYPSHITFVSVLNACAHAGL 525
Query: 392 VDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALL 451
VD+ F SM + YK++P+MEHY+ +V++ G+ +A + MP P+ VW ALL
Sbjct: 526 VDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALL 585
Query: 452 SSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGIS 511
+CR++ N +A +AA + +L YV L N A WD S++R M+ + I
Sbjct: 586 DACRIYNNVGLAHVAAEAMSRLEPESST-PYVLLYNMYADMGLWDEASQVRMNMESKRIK 644
Query: 512 KDTACSWVGADS 523
K+ SWV + +
Sbjct: 645 KERGSSWVDSST 656
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 176/416 (42%), Gaps = 62/416 (14%)
Query: 77 YLKCNCLRY---ARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDG 133
Y+ C +R+ AR++FD++ + ++N MI Y K ++ E+L L ++ + +
Sbjct: 112 YVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKM----PERNA 167
Query: 134 FTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIA 193
++S ++ G + +L + V+ LC AL +KN R++
Sbjct: 168 VSWSAMITGFCQN-----------GEVDSAVVLFRKMPVKDSSPLC-ALVAGLIKNERLS 215
Query: 194 YARTVFDVMS------EKNVISSTSLISGYMNQGLFKDAECIFQKTVD------------ 235
A V E V + +LI GY +G + A C+F + D
Sbjct: 216 EAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRE 275
Query: 236 ---KDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIG---ACSMVAA 289
K++V +N+MI+ Y K + + L ++ R IS I G M A
Sbjct: 276 RFCKNVVSWNSMIKAYLKVGDVVSARLL----FDQMKDRDTISWNTMIDGYVHVSRMEDA 331
Query: 290 FEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDG 349
F + ++ ++ + + ++ Y+ G V +R F+ +K+ SW S+I
Sbjct: 332 FALFSEMPNRDAHS--------WNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAA 383
Query: 350 YGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVD--KGLEIFQSMENEYK 407
Y KN EA++LF +M IE G P+ T S LSA GLV+ G+++ Q +
Sbjct: 384 YEKNKDYKEAVDLFIRMNIE-GEKPDPHTLTSLLSAS--TGLVNLRLGMQMHQIVVK--T 438
Query: 408 VKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMA 463
V P + + ++ + R G + ++ M + W A++ HGN A
Sbjct: 439 VIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEA 494
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 128/293 (43%), Gaps = 25/293 (8%)
Query: 86 ARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTS 145
AR +F+ L + +N MI Y+K+ ++ ++ R+L K D T++ ++ S
Sbjct: 59 ARDIFEKLEARNTVTWNTMISGYVKRREMNQA----RKLFDVMPKRDVVTWNTMISGYVS 114
Query: 146 TSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEK 205
G + L + ++ D +D + Y KN RI A +F+ M E+
Sbjct: 115 CGG--IRFLEEARKLF-------DEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPER 165
Query: 206 NVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDM 265
N +S +++I+G+ G A +F+K KD A++ G K + + +
Sbjct: 166 NAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYG 225
Query: 266 QRLNFRPN-ISTFASIIGACSMVAAFEVGQQVQSQL-----------MKTPFFGHIKLGS 313
++ R + + + ++I E + + Q+ + F ++ +
Sbjct: 226 SLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWN 285
Query: 314 ALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKM 366
++I Y K G VV +R +FD M ++ SW +MIDGY ++A LF +M
Sbjct: 286 SMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM 338
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 85/183 (46%), Gaps = 37/183 (20%)
Query: 187 VKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIE 246
+++G IA AR +F+ + +N ++ ++ISGY+ + A +F +D+V +N MI
Sbjct: 51 IRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMIS 110
Query: 247 GYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFF 306
GY +C + E +++ ++ F
Sbjct: 111 GYV---------------------------------SCGGIRFLEEARKLFDEMPSRDSF 137
Query: 307 GHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKM 366
+ +I Y+K R+ ++ +F+ M ++N SW++MI G+ +NG D A+ LF+KM
Sbjct: 138 SW----NTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKM 193
Query: 367 QIE 369
++
Sbjct: 194 PVK 196
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 140/340 (41%), Gaps = 50/340 (14%)
Query: 77 YLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTF 136
Y + AR F+ +K ++N +I AY K +E++ L R+ + GEK D T
Sbjct: 353 YASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTL 412
Query: 137 SMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYAR 196
+ +L AST LG +H ++K V D + AL Y + G I +R
Sbjct: 413 TSLLSASTGLVNLR------LGMQMHQIVVKT---VIPDVPVHNALITMYSRCGEIMESR 463
Query: 197 TVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECAT 256
+FD M K ++++ +NAMI GY+ A+
Sbjct: 464 RIFDEMKLK------------------------------REVITWNAMIGGYAFHGN-AS 492
Query: 257 RSLEVYIDMQRLNFRPNISTFASIIGACSMVAAF-EVGQQVQSQLMKTPFFGHIKLGSAL 315
+L ++ M+ P+ TF S++ AC+ E Q S + ++ S+L
Sbjct: 493 EALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSL 552
Query: 316 IDMYSKCGRVVDSRRVFDHM-HQKNVFSWTSMIDG---YGKNGFPDEALELFQKMQIEYG 371
+++ S G+ ++ + M + + W +++D Y G A E +++ E
Sbjct: 553 VNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPE-- 610
Query: 372 VVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPR 411
+ ++ + A GL D+ ++ +ME++ K R
Sbjct: 611 ---SSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKER 647
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 148/539 (27%), Positives = 251/539 (46%), Gaps = 93/539 (17%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G IH + ++ G + + +++ L+ +Y KC L A Q+F ++ D+ + +++ MI +Y +
Sbjct: 319 GIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQ 378
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
GQ +E++ L R ++ K + T + +L+ + LG+ +H +KAD+
Sbjct: 379 AGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASR------LGKSIHCYAIKADI 432
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQG-------LF 223
+ E + TA+ Y K GR + A F+ + K+ ++ +L GY G ++
Sbjct: 433 ESELETA--TAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVY 490
Query: 224 KD----------------------------AECIFQKTV----DKDIVVFNAMIEGYSKT 251
K+ C++ + + D + V +A+I ++K
Sbjct: 491 KNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKC 550
Query: 252 SECAT-------------------------------RSLEVYIDMQRLNFRPNISTFASI 280
A ++ + M+ F+PN TF +I
Sbjct: 551 DALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNI 610
Query: 281 IGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNV 340
+ A + ++A VG V S L++ F +G++L+DMY+KCG + S + F + K +
Sbjct: 611 VRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYI 670
Query: 341 FSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQ 400
SW +M+ Y +G A+ LF MQ E + P+ V+FLS LSAC HAGLV++G IF+
Sbjct: 671 VSWNTMLSAYAAHGLASCAVSLFLSMQ-ENELKPDSVSFLSVLSACRHAGLVEEGKRIFE 729
Query: 401 SMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNT 460
M +K++ +EHYAC+VDLLG+AG +A E + RM + + VW ALL+S R+H N
Sbjct: 730 EMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNL 789
Query: 461 EMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
++ A +L KL P Y L EV I K ACSW+
Sbjct: 790 WLSNAALCQLVKLEPL-NPSHY-------------SQDRRLGEVNNVSRIKKVPACSWI 834
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 193/413 (46%), Gaps = 46/413 (11%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQ 111
+ +H ++K GF+ S L+ +Y C L A VF+++ K S++ M+ AY
Sbjct: 221 RCLHGLVIKKGFI--FAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHN 278
Query: 112 GQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVD 171
G EE L L + +++ K + +++ + A +GDL + +
Sbjct: 279 GFFEEVLELFDLMRNYDVRMN--------KVAAASALQAAAYVGDLVKGI---------- 320
Query: 172 VEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQ 231
A+ D V+ G I +V +TSL+S Y G + AE +F
Sbjct: 321 ---------AIHDYAVQQGLIG------------DVSVATSLMSMYSKCGELEIAEQLFI 359
Query: 232 KTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFE 291
D+D+V ++AMI Y + + ++ ++ DM R++ +PN T S++ C+ VAA
Sbjct: 360 NIEDRDVVSWSAMIASYEQAGQ-HDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASR 418
Query: 292 VGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYG 351
+G+ + +K ++ +A+I MY+KCGR + + F+ + K+ ++ ++ GY
Sbjct: 419 LGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYT 478
Query: 352 KNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIF-QSMENEYKVKP 410
+ G ++A ++++ M++ +GV P+ T + L CA +G ++ Q +++ + +
Sbjct: 479 QIGDANKAFDVYKNMKL-HGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSEC 537
Query: 411 RMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMA 463
+ H ++++ + L A + ++ W +++ LHG E A
Sbjct: 538 HVAH--ALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEA 588
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 185/409 (45%), Gaps = 66/409 (16%)
Query: 54 IHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQ 113
+H ++ +G P+ + I L+ + + +R +FD +RD + +N MI Y + G
Sbjct: 24 VHGSLIVSGLKPHNQL-INAYSLFQRQD---LSRVIFDSVRDPGVVLWNSMIRGYTRAGL 79
Query: 114 VEESLGLVRRLLVSGEK---LDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
E+LG + S EK D ++F+ LKA + D + + + L A++
Sbjct: 80 HREALGFFGYM--SEEKGIDPDKYSFTFALKACAGSM--------DFKKGLRIHDLIAEM 129
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
+E D + TAL + Y K + AR VFD M K+V++ +++SG G
Sbjct: 130 GLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNG--------- 180
Query: 231 QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAF 290
C++ +L ++ DM+ + + ++I A S +
Sbjct: 181 -----------------------CSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKS 217
Query: 291 EVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGY 350
+V + + ++K F S LIDMY C + + VF+ + +K+ SW +M+ Y
Sbjct: 218 DVCRCLHGLVIKKGFI--FAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAY 275
Query: 351 GKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKP 410
NGF +E LELF M+ Y V N V SAL A A+ G + KG+ I ++Y V+
Sbjct: 276 AHNGFFEEVLELFDLMR-NYDVRMNKVAAASALQAAAYVGDLVKGIAI-----HDYAVQQ 329
Query: 411 RMEHYACV----VDLLGRAGRLNQAWEFVMRMPERPNSDV--WAALLSS 453
+ V + + + G L A + + + +R DV W+A+++S
Sbjct: 330 GLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDR---DVVSWSAMIAS 375
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 158/389 (40%), Gaps = 44/389 (11%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G IH I + G + I L+ +Y K L ARQVFD + K + +N M+ +
Sbjct: 119 GLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQ 178
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
G +L L + +D + ++ A +
Sbjct: 179 NGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSK------------------------- 213
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
+EK DV C L +K G I S+ LI Y N AE +F
Sbjct: 214 -LEKSDV-CRCLHGLVIKKGFI--------------FAFSSGLIDMYCNCADLYAAESVF 257
Query: 231 QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAF 290
++ KD + M+ Y+ LE++ M+ + R N AS + A + V
Sbjct: 258 EEVWRKDESSWGTMMAAYAHNGF-FEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDL 316
Query: 291 EVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGY 350
G + ++ G + + ++L+ MYSKCG + + ++F ++ ++V SW++MI Y
Sbjct: 317 VKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASY 376
Query: 351 GKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKP 410
+ G DEA+ LF+ M + + PN VT S L CA G I + ++
Sbjct: 377 EQAGQHDEAISLFRDM-MRIHIKPNAVTLTSVLQGCAGVAASRLGKSI-HCYAIKADIES 434
Query: 411 RMEHYACVVDLLGRAGRLNQAWEFVMRMP 439
+E V+ + + GR + A + R+P
Sbjct: 435 ELETATAVISMYAKCGRFSPALKAFERLP 463
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 144/356 (40%), Gaps = 81/356 (22%)
Query: 23 LQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNC 82
++ H P S + LQ + G ++ I+K GF +++ L+ ++ KC+
Sbjct: 493 MKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDA 552
Query: 83 LRYARQVFDDLR-DKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILK 141
L A +FD +K+ ++N M+ YL GQ EE++ R++ V + + TF I++
Sbjct: 553 LAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVR 612
Query: 142 ASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDV 201
A+ S V G VH +++ + + +L D Y K G I + F
Sbjct: 613 AAAELSALRV------GMSVHSSLIQCGFCSQTP--VGNSLVDMYAKCGMIESSEKCFIE 664
Query: 202 MSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEV 261
+S K ++S +++S Y GL A+ ++ +
Sbjct: 665 ISNKYIVSWNTMLSAYAAHGL--------------------------------ASCAVSL 692
Query: 262 YIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSK 321
++ MQ +P+ +F S++ AC
Sbjct: 693 FLSMQENELKPDSVSFLSVLSAC-----------------------------------RH 717
Query: 322 CGRVVDSRRVFDHMHQKN-----VFSWTSMIDGYGKNGFPDEALELFQKMQIEYGV 372
G V + +R+F+ M +++ V + M+D GK G EA+E+ ++M+++ V
Sbjct: 718 AGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSV 773
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 164/558 (29%), Positives = 252/558 (45%), Gaps = 79/558 (14%)
Query: 32 STLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFD 91
ST + L S+ G+ IH ++K G + + LL +Y KC + A VF
Sbjct: 272 STSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFS 331
Query: 92 DLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNV 151
+ DK L +N M+ AY + +L L + D FT S ++ + V
Sbjct: 332 CVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCS------V 385
Query: 152 APLGDLGRIVHVQILK---------------------ADVDV--------EKDDVLCTAL 182
L + G+ VH ++ K D D EKD V +L
Sbjct: 386 LGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSL 445
Query: 183 TDSYVKNGRIAYARTVF--------------DVMSEK----------------------- 205
KNG+ A VF D+M+
Sbjct: 446 ISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT 505
Query: 206 ----NVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEV 261
NV +SLI Y GL + A +F +++V +N+MI YS+ + S+++
Sbjct: 506 GLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNN-LPELSIDL 564
Query: 262 YIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSK 321
+ M P+ + S++ A S A+ G+ + ++ L +ALIDMY K
Sbjct: 565 FNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVK 624
Query: 322 CGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLS 381
CG + +F M K++ +W MI GYG +G AL LF +M+ + G P+ VTFLS
Sbjct: 625 CGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMK-KAGESPDDVTFLS 683
Query: 382 ALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPER 441
+SAC H+G V++G IF+ M+ +Y ++P MEHYA +VDLLGRAG L +A+ F+ MP
Sbjct: 684 LISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIE 743
Query: 442 PNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSEL 501
+S +W LLS+ R H N E+ L+A +L ++ R YV L N A + ++L
Sbjct: 744 ADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPE-RGSTYVQLINLYMEAGLKNEAAKL 802
Query: 502 REVMKERGISKDTACSWV 519
+MKE+G+ K CSW+
Sbjct: 803 LGLMKEKGLHKQPGCSWI 820
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/452 (24%), Positives = 208/452 (46%), Gaps = 49/452 (10%)
Query: 49 SSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDD-------LRDKTLSAY 101
S G+TIH ++ G+ + I+ L+ +Y+KC L YA QVFD + + ++ +
Sbjct: 77 SYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVW 136
Query: 102 NYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIV 161
N MI Y K + +E +G RR+LV G + D F+ S+++ G+ +
Sbjct: 137 NSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREE----GKQI 192
Query: 162 HVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQG 221
H +L+ +D TDS++K T+LI Y G
Sbjct: 193 HGFMLRNSLD-----------TDSFLK----------------------TALIDMYFKFG 219
Query: 222 LFKDAECIFQKTVDK-DIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASI 280
L DA +F + DK ++V++N MI G+ + C + SL++Y+ + + + ++F
Sbjct: 220 LSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICES-SLDLYMLAKNNSVKLVSTSFTGA 278
Query: 281 IGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNV 340
+GACS G+Q+ ++K + ++L+ MYSKCG V ++ VF + K +
Sbjct: 279 LGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRL 338
Query: 341 FSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQ 400
W +M+ Y +N + AL+LF M+ + V+P+ T + +S C+ GL + G +
Sbjct: 339 EIWNAMVAAYAENDYGYSALDLFGFMR-QKSVLPDSFTLSNVISCCSVLGLYNYGKSVHA 397
Query: 401 SMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNT 460
+ ++ + ++ L + G A+ V + E + W +L+S +G
Sbjct: 398 ELFKR-PIQSTSTIESALLTLYSKCGCDPDAY-LVFKSMEEKDMVAWGSLISGLCKNGKF 455
Query: 461 EMAKLAASELFKLNANGRPGAYVALSNTLAAA 492
+ A ++ + + +P + + S T A A
Sbjct: 456 KEALKVFGDMKDDDDSLKPDSDIMTSVTNACA 487
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 168/413 (40%), Gaps = 78/413 (18%)
Query: 30 PHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQV 89
P S ++++ + G +H ++KTG V N + L+ LY KC A +V
Sbjct: 474 PDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKV 533
Query: 90 FDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGR 149
F + + + A+N MI Y + E S+ L +L G D + + +L A +ST+
Sbjct: 534 FTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASL 593
Query: 150 NVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVIS 209
G+ +H L+ + + D L AL D YVK G YA +F M K++I+
Sbjct: 594 LK------GKSLHGYTLR--LGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLIT 645
Query: 210 STSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLN 269
+N MI GY +C T +L ++ +M++
Sbjct: 646 -------------------------------WNLMIYGYGSHGDCIT-ALSLFDEMKKAG 673
Query: 270 FRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSR 329
P+ TF S+I AC+ E G+ + + MK
Sbjct: 674 ESPDDVTFLSLISACNHSGFVEEGKNI-FEFMKQ-------------------------- 706
Query: 330 RVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHA 389
D+ + N+ + +M+D G+ G +EA + M IE + +L LSA
Sbjct: 707 ---DYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIE----ADSSIWLCLLSASRTH 759
Query: 390 GLVDKGLEIFQSMENEYKVKP-RMEHYACVVDLLGRAGRLNQAWEFVMRMPER 441
V+ G+ S E +++P R Y +++L AG N+A + + M E+
Sbjct: 760 HNVELGI---LSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEK 809
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 157/485 (32%), Positives = 259/485 (53%), Gaps = 44/485 (9%)
Query: 69 ISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRL---- 124
+S LL +Y C CL+ AR++FD++ ++ L +N M+ Y K G +E++ L ++
Sbjct: 210 VSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKD 269
Query: 125 LVS-GEKLDG-----------FTFSMILKAST-----------STSGRNVAPLGDLGRIV 161
+VS G +DG ++ +L+ S S R+V G +
Sbjct: 270 IVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVG--SSKGLQL 327
Query: 162 HVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQG 221
H I+K D D L + Y + I A F+ + ++ S +LI+G++ G
Sbjct: 328 HGTIVKRGFDCY--DFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNG 385
Query: 222 LFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDM-QRLNFRPNISTFASI 280
+ + A +F +T DKDI +NAMI GY++ S +L ++ +M +P+ T S+
Sbjct: 386 MVEQAREVFDQTHDKDIFSWNAMISGYAQ-SLSPQLALHLFREMISSSQVKPDAITMVSV 444
Query: 281 IGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQ-KN 339
A S + + E G++ L + + L +A+IDMY+KCG + + +F HQ KN
Sbjct: 445 FSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIF---HQTKN 501
Query: 340 VFS-----WTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDK 394
+ S W ++I G +G AL+L+ +Q + PN +TF+ LSAC HAGLV+
Sbjct: 502 ISSSTISPWNAIICGSATHGHAKLALDLYSDLQ-SLPIKPNSITFVGVLSACCHAGLVEL 560
Query: 395 GLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSC 454
G F+SM++++ ++P ++HY C+VDLLG+AGRL +A E + +MP + + +W LLS+
Sbjct: 561 GKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSAS 620
Query: 455 RLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDT 514
R HGN E+A+LAA+EL ++ + G V LSN A A +W+ V+ +RE M+ R +
Sbjct: 621 RTHGNVEIAELAATELAAIDPS-HGGCKVMLSNVYADAGRWEDVALVREEMRTRDVEWSR 679
Query: 515 ACSWV 519
A S V
Sbjct: 680 AFSGV 684
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 139/270 (51%), Gaps = 12/270 (4%)
Query: 158 GRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGY 217
GR +H ++LK+ +D + +C ++ + Y K +A A +VF ++ + S ++ GY
Sbjct: 60 GRQIHCRVLKSGLD--SNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGY 117
Query: 218 MNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTF 277
+ DA +F ++ V + +I+GY++ ++ + ++E++ +M+ L N T
Sbjct: 118 VRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQ-WSEAMELFREMRNLGIMLNEVTL 176
Query: 278 ASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQ 337
A++I ACS + + +QS +K G + + + L+ MY C + D+R++FD M +
Sbjct: 177 ATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPE 236
Query: 338 KNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLE 397
+N+ +W M++GY K G ++A ELF ++ + V++ + + C +D+ L
Sbjct: 237 RNLVTWNVMLNGYSKAGLIEQAEELFDQI-----TEKDIVSWGTMIDGCLRKNQLDEALV 291
Query: 398 IFQSMENEYKVKPRMEHYACVVDLLGRAGR 427
+ M +KP +VDLL + R
Sbjct: 292 YYTEML-RCGMKPS---EVMMVDLLSASAR 317
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 142/361 (39%), Gaps = 75/361 (20%)
Query: 30 PHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGF-----------------------VPN 66
P ++ + L S S G +H I+K GF +
Sbjct: 303 PSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQ 362
Query: 67 TNISIK--------LLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESL 118
S+K L+ ++K + AR+VFD DK + ++N MI Y + + +L
Sbjct: 363 FEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLAL 422
Query: 119 GLVRRLLVSGE-KLDGFTFSMILKASTSTSGRNVAPLGDL--GRIVHVQILKADVDVEKD 175
L R ++ S + K D T + A ++ LG L G+ H + + + +
Sbjct: 423 HLFREMISSSQVKPDAITMVSVFSA--------ISSLGSLEEGKRAHDYLNFS--TIPPN 472
Query: 176 DVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVD 235
D L A+ D Y K G I A +F KN+ SST
Sbjct: 473 DNLTAAIIDMYAKCGSIETALNIFH--QTKNISSST------------------------ 506
Query: 236 KDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQ 295
I +NA+I G S T A +L++Y D+Q L +PN TF ++ AC E+G+
Sbjct: 507 --ISPWNAIICG-SATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKT 563
Query: 296 -VQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQK-NVFSWTSMIDGYGKN 353
+S IK ++D+ K GR+ +++ + M K +V W ++ +
Sbjct: 564 YFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTH 623
Query: 354 G 354
G
Sbjct: 624 G 624
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/314 (35%), Positives = 184/314 (58%), Gaps = 3/314 (0%)
Query: 206 NVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDM 265
+V +SL+ Y + G ++A +F++ ++++V + AMI G+++ L++Y M
Sbjct: 154 DVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDI-CLKLYSKM 212
Query: 266 QRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRV 325
++ PN TF +++ AC+ A G+ V Q + ++ + ++LI MY KCG +
Sbjct: 213 RKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDL 272
Query: 326 VDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSA 385
D+ R+FD K+V SW SMI GY ++G +A+ELF+ M + G P+ +T+L LS+
Sbjct: 273 KDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSS 332
Query: 386 CAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSD 445
C HAGLV +G + F M E+ +KP + HY+C+VDLLGR G L +A E + MP +PNS
Sbjct: 333 CRHAGLVKEGRKFFNLMA-EHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSV 391
Query: 446 VWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVM 505
+W +LL SCR+HG+ AA E L + +V L+N A+ W + +R++M
Sbjct: 392 IWGSLLFSCRVHGDVWTGIRAAEERLMLEPDC-AATHVQLANLYASVGYWKEAATVRKLM 450
Query: 506 KERGISKDTACSWV 519
K++G+ + CSW+
Sbjct: 451 KDKGLKTNPGCSWI 464
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 143/347 (41%), Gaps = 74/347 (21%)
Query: 50 SGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYL 109
+G H LK GF+ + + L+VLY + A +VF+++ ++ + ++ MI +
Sbjct: 138 TGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFA 197
Query: 110 KQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKAD 169
++ +V+ L L ++ S + +TF+ +L A T + LG GR VH Q L
Sbjct: 198 QEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGS-----GALGQ-GRSVHCQTLH-- 249
Query: 170 VDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECI 229
+ ++ + +L Y K G + A +FD S K+V+S S+I+GY GL A
Sbjct: 250 MGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQA--- 306
Query: 230 FQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAA 289
I +F M M + +P+ T+ ++ +C
Sbjct: 307 --------IELFELM--------------------MPKSGTKPDAITYLGVLSSCRHA-- 336
Query: 290 FEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDG 349
G +K G ++ + +H + + ++ ++D
Sbjct: 337 -----------------GLVKEGRKFFNLMA------------EHGLKPELNHYSCLVDL 367
Query: 350 YGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGL 396
G+ G EALEL + M ++ PN V + S L +C G V G+
Sbjct: 368 LGRFGLLQEALELIENMPMK----PNSVIWGSLLFSCRVHGDVWTGI 410
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 113/245 (46%), Gaps = 18/245 (7%)
Query: 277 FASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMH 336
+S + +C + F G +K F + LGS+L+ +Y G V ++ +VF+ M
Sbjct: 123 LSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMP 182
Query: 337 QKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGL 396
++NV SWT+MI G+ + D L+L+ KM+ + PN TF + LSAC +G + +G
Sbjct: 183 ERNVVSWTAMISGFAQEWRVDICLKLYSKMR-KSTSDPNDYTFTALLSACTGSGALGQGR 241
Query: 397 EIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDV--WAALLSSC 454
+ +K + ++ + + G L A+ + N DV W ++++
Sbjct: 242 SV-HCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRI---FDQFSNKDVVSWNSMIAGY 297
Query: 455 RLHGNTEMAKLAASELFKL---NANGRPGAYVALSNTLAAAEKWDSVSELRE---VMKER 508
HG + A ELF+L + +P A L L++ V E R+ +M E
Sbjct: 298 AQHG----LAMQAIELFELMMPKSGTKPDAITYL-GVLSSCRHAGLVKEGRKFFNLMAEH 352
Query: 509 GISKD 513
G+ +
Sbjct: 353 GLKPE 357
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 30 PHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQV 89
P+ + L S G+++H L G +IS L+ +Y KC L+ A ++
Sbjct: 219 PNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRI 278
Query: 90 FDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLL-VSGEKLDGFTFSMILKA 142
FD +K + ++N MI Y + G +++ L ++ SG K D T+ +L +
Sbjct: 279 FDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSS 332
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 142/474 (29%), Positives = 238/474 (50%), Gaps = 50/474 (10%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLR---DKTLSAYNYMIGA 107
G+ +H ++K+G + L+ +Y C L YA VF + + +++ +N M+
Sbjct: 257 GKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSG 316
Query: 108 YLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILK 167
+L + E +L L+ ++ S D +T S LK N L LG VH ++
Sbjct: 317 FLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICI-----NYVNL-RLGLQVHSLVVV 370
Query: 168 ADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAE 227
+ E + I + L+ + N G +DA
Sbjct: 371 SGY---------------------------------ELDYIVGSILVDLHANVGNIQDAH 397
Query: 228 CIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYI--DMQRLNFRPNISTFASIIGACS 285
+F + +KDI+ F+ +I G K+ SL Y+ ++ +L + ++I+ CS
Sbjct: 398 KLFHRLPNKDIIAFSGLIRGCVKS---GFNSLAFYLFRELIKLGLDADQFIVSNILKVCS 454
Query: 286 MVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTS 345
+A+ G+Q+ +K + +AL+DMY KCG + + +FD M +++V SWT
Sbjct: 455 SLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTG 514
Query: 346 MIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENE 405
+I G+G+NG +EA F KM I G+ PN VTFL LSAC H+GL+++ ++M++E
Sbjct: 515 IIVGFGQNGRVEEAFRYFHKM-INIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSE 573
Query: 406 YKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKL 465
Y ++P +EHY CVVDLLG+AG +A E + +MP P+ +W +LL++C H N + +
Sbjct: 574 YGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTV 633
Query: 466 AASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
A +L K P Y +LSN A WD +S++RE K+ G +K++ SW+
Sbjct: 634 IAEKLLK-GFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLG-AKESGMSWI 685
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 210/444 (47%), Gaps = 51/444 (11%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G++I +H++K G N I+ ++ +Y+ L A +VFD++ ++ + + M+ Y
Sbjct: 24 GESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTS 83
Query: 111 QGQVEESLGLVRRLLVSGEKL-DGFTFSMILKASTSTSGRNVAPLGD--LGRIVHVQILK 167
G+ +++ L RR+L S E+ + F +S +LKA +GD LG +V+ +I K
Sbjct: 84 DGKPNKAIELYRRMLDSEEEAANEFMYSAVLKAC--------GLVGDIQLGILVYERIGK 135
Query: 168 ADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAE 227
++ D VL ++ D YVKNGR+ A + F + + S +LISGY GL +A
Sbjct: 136 ENL--RGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAV 193
Query: 228 CIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMV 287
+F + ++V +N +I G+ + + R+LE + MQR + + ACS
Sbjct: 194 TLFHRMPQPNVVSWNCLISGF--VDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFG 251
Query: 288 AAFEVGQQ-----VQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQK---- 338
+G+Q V+S L +PF SALIDMYS CG ++ + VF HQ+
Sbjct: 252 GLLTMGKQLHCCVVKSGLESSPF-----AISALIDMYSNCGSLIYAADVF---HQEKLAV 303
Query: 339 --NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAH-----AGL 391
+V W SM+ G+ N + AL L ++ + + + T AL C + GL
Sbjct: 304 NSSVAVWNSMLSGFLINEENEAALWLLLQIY-QSDLCFDSYTLSGALKICINYVNLRLGL 362
Query: 392 VDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDV--WAA 449
L + E +Y V + +VDL G + A + R+ PN D+ ++
Sbjct: 363 QVHSLVVVSGYELDYIVG------SILVDLHANVGNIQDAHKLFHRL---PNKDIIAFSG 413
Query: 450 LLSSCRLHGNTEMAKLAASELFKL 473
L+ C G +A EL KL
Sbjct: 414 LIRGCVKSGFNSLAFYLFRELIKL 437
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 96/180 (53%), Gaps = 2/180 (1%)
Query: 273 NISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVF 332
++ A+ + C V AF+ G+ +Q+ ++K ++ + + +I MY + D+ +VF
Sbjct: 4 DLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVF 63
Query: 333 DHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLV 392
D M ++N+ +WT+M+ GY +G P++A+EL+++M N + + L AC G +
Sbjct: 64 DEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDI 123
Query: 393 DKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLS 452
G+ +++ + E ++ + VVD+ + GRL +A + RP+S W L+S
Sbjct: 124 QLGILVYERIGKE-NLRGDVVLMNSVVDMYVKNGRLIEA-NSSFKEILRPSSTSWNTLIS 181
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 146/373 (39%), Gaps = 85/373 (22%)
Query: 27 DFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYA 86
D S LS L+ IN G +HS ++ +G+ + + L+ L+ ++ A
Sbjct: 337 DLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDA 396
Query: 87 RQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTST 146
++F L +K + A++ +I +K G + L R L+ G D F S ILK +S
Sbjct: 397 HKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSS- 455
Query: 147 SGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKN 206
+A LG G+ +H +K E + V TAL D YVK G I +FD M E++
Sbjct: 456 ----LASLG-WGKQIHGLCIKKGY--ESEPVTATALVDMYVKCGEIDNGVVLFDGMLERD 508
Query: 207 VISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQ 266
V+S T +I G+ G ++A F K ++
Sbjct: 509 VVSWTGIIVGFGQNGRVEEAFRYFHKMIN------------------------------- 537
Query: 267 RLNFRPNISTFASIIGACSMVAAFEVG----QQVQSQLMKTPFFGHIKLGSALIDMYSKC 322
+ PN TF ++ AC E + ++S+ P+ H
Sbjct: 538 -IGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEH-------------- 582
Query: 323 GRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSA 382
+ ++D G+ G EA EL KM +E P+ + S
Sbjct: 583 --------------------YYCVVDLLGQAGLFQEANELINKMPLE----PDKTIWTSL 618
Query: 383 LSACA---HAGLV 392
L+AC +AGLV
Sbjct: 619 LTACGTHKNAGLV 631
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 221 bits (564), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 252/509 (49%), Gaps = 47/509 (9%)
Query: 49 SSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAY 108
+S + +H+ IL+ G V ++ ++ +L+ Y+ +F + ++ N +I
Sbjct: 43 ASLRHVHAQILRRG-VLSSRVAAQLVSCSSLLKSPDYSLSIFRNSEERNPFVLNALIRGL 101
Query: 109 LKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKA 168
+ + E S+ +L G K D TF +LK+++ R LGR +H LK
Sbjct: 102 TENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRW------LGRALHAATLKN 155
Query: 169 DVDVEKDDVLCTALTDSYVKNGRIAYA--------------------------------- 195
VD D + +L D Y K G++ +A
Sbjct: 156 FVDC--DSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMH 213
Query: 196 --RTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSE 253
T+F M E+N S ++LI GY++ G A+ +F+ +K++V + +I G+S+T +
Sbjct: 214 MATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGD 273
Query: 254 CATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGS 313
T ++ Y +M +PN T A+++ ACS A G ++ ++ +G+
Sbjct: 274 YET-AISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGT 332
Query: 314 ALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVV 373
AL+DMY+KCG + + VF +M+ K++ SWT+MI G+ +G +A++ F++M G
Sbjct: 333 ALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYS-GEK 391
Query: 374 PNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWE 433
P+ V FL+ L+AC ++ VD GL F SM +Y ++P ++HY VVDLLGRAG+LN+A E
Sbjct: 392 PDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHE 451
Query: 434 FVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAE 493
V MP P+ WAAL +C+ H A+ + L +L+ G+Y+ L T A+
Sbjct: 452 LVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPE-LCGSYIFLDKTHASKG 510
Query: 494 KWDSVSELREVMKERGISKDTACSWVGAD 522
V + R +++R + S++ D
Sbjct: 511 NIQDVEKRRLSLQKRIKERSLGWSYIELD 539
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 56/118 (47%)
Query: 30 PHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQV 89
P+ ++ L S SG IH +IL G + I L+ +Y KC L A V
Sbjct: 291 PNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATV 350
Query: 90 FDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTS 147
F ++ K + ++ MI + G+ +++ R+++ SGEK D F +L A ++S
Sbjct: 351 FSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSS 408
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 221 bits (564), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 154/472 (32%), Positives = 236/472 (50%), Gaps = 55/472 (11%)
Query: 49 SSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLS-AYNYMIGA 107
S G+ +H L++GF+ T++ L+ Y C + AR+VFD++ + ++ ++
Sbjct: 142 SIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNG 201
Query: 108 YLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILK 167
YL+ + +L L R + S ++ T L A ++ LGDL +L
Sbjct: 202 YLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSA--------ISDLGDLSGAESAHVLC 253
Query: 168 ADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAE 227
+ ++ D L TAL Y K G I+ AR
Sbjct: 254 IKIGLDLDLHLITALIGMYGKTGGISSARR------------------------------ 283
Query: 228 CIFQKTVDKDIVVFNAMIEGYSKT---SECATRSLEVYIDMQRLNFRPNISTFASIIGAC 284
IF + KD+V +N MI+ Y+KT EC + + M+ +PN STF ++ +C
Sbjct: 284 -IFDCAIRKDVVTWNCMIDQYAKTGLLEEC----VWLLRQMKYEKMKPNSSTFVGLLSSC 338
Query: 285 SMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWT 344
+ A VG+ V L + LG+AL+DMY+K G + + +F+ M K+V SWT
Sbjct: 339 AYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWT 398
Query: 345 SMIDGYGKNGFPDEALELFQKMQIE-YGVVPNFVTFLSALSACAHAGLVDKGLEIFQSME 403
+MI GYG +G EA+ LF KM+ E V PN +TFL L+AC+H GLV +G+ F+ M
Sbjct: 399 AMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMV 458
Query: 404 NEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMA 463
Y P++EHY CVVDLLGRAG+L +A+E + +P +S W ALL++CR++GN A
Sbjct: 459 EAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGN---A 515
Query: 464 KLAASELFKLNANGR--PGAYVALSNTLAAAEKWDSV--SELREVMKERGIS 511
L S + +L G P + L+ T A A + +EL + KE G S
Sbjct: 516 DLGESVMMRLAEMGETHPADAILLAGTHAVAGNPEKSLDNELNKGRKEAGYS 567
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 138/313 (44%), Gaps = 58/313 (18%)
Query: 196 RTVFDVMSEKNVISSTSLISGYM-NQGLFKD------------------AECIFQKTVDK 236
+ + D+ S ++ + S I GYM GL KD A IF+ +
Sbjct: 30 KLINDLRSCRDTVE-VSRIHGYMVKTGLDKDDFAVSKLLAFSSVLDIRYASSIFEHVSNT 88
Query: 237 DIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQV 296
++ +FN MI GYS + E R+ V+ ++ + +F + + +CS +G+ +
Sbjct: 89 NLFMFNTMIRGYSISDE-PERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGL 147
Query: 297 QSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQK-NVFSWTSMIDGYGKNGF 355
+++ F L +ALI Y CG++ D+R+VFD M Q + +++++++GY +
Sbjct: 148 HGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSK 207
Query: 356 PDEALELFQKMQIEYGVVPNFVTFLSALSA----------------CAHAGLVDKGLEIF 399
AL+LF+ M+ + VV N T LS LSA C GL D L +
Sbjct: 208 KALALDLFRIMR-KSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGL-DLDLHLI 265
Query: 400 QSMENEY---------------KVKPRMEHYACVVDLLGRAGRLNQAWEFVMRM---PER 441
++ Y ++ + + C++D + G L + + +M +
Sbjct: 266 TALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMK 325
Query: 442 PNSDVWAALLSSC 454
PNS + LLSSC
Sbjct: 326 PNSSTFVGLLSSC 338
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 221 bits (563), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 131/454 (28%), Positives = 233/454 (51%), Gaps = 20/454 (4%)
Query: 73 LLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLD 132
LL Y+ A VF ++ + A+N MI + G++E L L + +L S K D
Sbjct: 144 LLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPD 203
Query: 133 GFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILK---ADVDVEKDDVLCTALTDSYVKN 189
+TFS ++ A ++ S V GR+VH +LK + K+ VL Y K
Sbjct: 204 CYTFSSLMNACSADSSNVV-----YGRMVHAVMLKNGWSSAVEAKNSVL-----SFYTKL 253
Query: 190 GRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYS 249
G A + + +S S+I M G + A +F +K+IV + MI GY
Sbjct: 254 GSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYG 313
Query: 250 KTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHI 309
+ + ++L +++M + + + +++ ACS +A G+ + L+ F G+
Sbjct: 314 RNGD-GEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYA 372
Query: 310 KLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIE 369
+G+AL+++Y+KCG + ++ R F + K++ SW +M+ +G +G D+AL+L+ M I
Sbjct: 373 YVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNM-IA 431
Query: 370 YGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLN 429
G+ P+ VTF+ L+ C+H+GLV++G IF+SM +Y++ ++H C++D+ GR G L
Sbjct: 432 SGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLA 491
Query: 430 QAWEFVMR----MPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVAL 485
+A + + + N+ W LL +C H +TE+ + S++ K+ ++V L
Sbjct: 492 EAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGR-EVSKVLKIAEPSEEMSFVLL 550
Query: 486 SNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
SN + +W ++R M ERG+ K CSW+
Sbjct: 551 SNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWI 584
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 190/418 (45%), Gaps = 58/418 (13%)
Query: 86 ARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTS 145
ARQVFD + + A+N M+ +Y + G +E++ L +L S K D ++F+ IL ST
Sbjct: 23 ARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAIL--STC 80
Query: 146 TSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVM--S 203
S NV GR + ++++ + +L D Y K A VF M
Sbjct: 81 ASLGNV----KFGRKIQSLVIRSGFCASLP--VNNSLIDMYGKCSDTLSANKVFRDMCCD 134
Query: 204 EKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYI 263
+N ++ SL+ YMN F+ A +F + + +N MI G++ + + L ++
Sbjct: 135 SRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLES-CLSLFK 193
Query: 264 DMQRLNFRPNISTFASIIGACSMVAAFEV-GQQVQSQLMKTPFFGHIKLGSALIDMYSKC 322
+M F+P+ TF+S++ ACS ++ V G+ V + ++K + ++ ++++ Y+K
Sbjct: 194 EMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKL 253
Query: 323 GRVVDSRR-------------------------------VFDHMHQKNVFSWTSMIDGYG 351
G D+ R VF +KN+ +WT+MI GYG
Sbjct: 254 GSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYG 313
Query: 352 KNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPR 411
+NG ++AL F +M ++ GV + + + L AC+ L+ G I + +
Sbjct: 314 RNGDGEQALRFFVEM-MKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCL-----IHCG 367
Query: 412 MEHYACV----VDLLGRAGRLNQAWEFVMRMPERPNSDV--WAALLSSCRLHGNTEMA 463
+ YA V V+L + G + +A + N D+ W +L + +HG + A
Sbjct: 368 FQGYAYVGNALVNLYAKCGDIKEA---DRAFGDIANKDLVSWNTMLFAFGVHGLADQA 422
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 110/231 (47%), Gaps = 40/231 (17%)
Query: 180 TALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIV 239
T+ S K+GRIA AR VFD M E + ++ ++++ Y GL ++
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQE-------------- 53
Query: 240 VFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQ 299
++ ++ ++ + +P+ +F +I+ C+ + + G+++QS
Sbjct: 54 ------------------AIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSL 95
Query: 300 LMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHM--HQKNVFSWTSMIDGYGKNGFPD 357
++++ F + + ++LIDMY KC + + +VF M +N +W S++ Y +
Sbjct: 96 VIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFE 155
Query: 358 EALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSM-ENEYK 407
AL++F +M N + +S AH G ++ L +F+ M E+E+K
Sbjct: 156 AALDVFVEMPKRVAFAWNIM-----ISGHAHCGKLESCLSLFKEMLESEFK 201
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 9/147 (6%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ IH ++ GF + L+ LY KC ++ A + F D+ +K L ++N M+ A+
Sbjct: 356 GKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGV 415
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKA-D 169
G +++L L ++ SG K D TF +L + S SG L + G ++ ++K
Sbjct: 416 HGLADQALKLYDNMIASGIKPDNVTFIGLL-TTCSHSG-----LVEEGCMIFESMVKDYR 469
Query: 170 VDVEKDDVLCTALTDSYVKNGRIAYAR 196
+ +E D V C + D + + G +A A+
Sbjct: 470 IPLEVDHVTC--MIDMFGRGGHLAEAK 494
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 128/287 (44%), Gaps = 24/287 (8%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ +H+ +LK G+ +L Y K A + + + T ++N +I A +K
Sbjct: 224 GRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMK 283
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
G+ E++L + ++ EK I+ +T +G G+ V+++K+ V
Sbjct: 284 IGETEKALEVFH---LAPEK-------NIVTWTTMITGYGRNGDGEQALRFFVEMMKSGV 333
Query: 171 DVEK---DDVL--CTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKD 225
D + VL C+ L + + +G++ + + + +L++ Y G K+
Sbjct: 334 DSDHFAYGAVLHACSGL--ALLGHGKMIHG-CLIHCGFQGYAYVGNALVNLYAKCGDIKE 390
Query: 226 AECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACS 285
A+ F +KD+V +N M+ + A ++L++Y +M +P+ TF ++ CS
Sbjct: 391 ADRAFGDIANKDLVSWNTMLFAFG-VHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCS 449
Query: 286 MVAAFEVGQQVQSQLMK---TPFFGHIKLGSALIDMYSKCGRVVDSR 329
E G + ++K P + + +IDM+ + G + +++
Sbjct: 450 HSGLVEEGCMIFESMVKDYRIPL--EVDHVTCMIDMFGRGGHLAEAK 494
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 135/456 (29%), Positives = 238/456 (52%), Gaps = 28/456 (6%)
Query: 80 CNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGL-VRRLLV--SGEKLDGFTF 136
CN L YAR +FD Y ++ AY + S RL+V S + + F +
Sbjct: 71 CN-LSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIY 129
Query: 137 SMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKN-GRIAYA 195
++LK++ S PL VH + K+ + V+ TAL SY + I A
Sbjct: 130 PLVLKSTPYLSSAFSTPL------VHTHLFKSGFHLYV--VVQTALLHSYASSVSHITLA 181
Query: 196 RTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECA 255
R +FD MSE+NV+S T+++SGY G +A +F+ ++D+ +NA++ ++
Sbjct: 182 RQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNG--- 238
Query: 256 TRSLEVYIDMQRL----NFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKL 311
LE +R+ + RPN T ++ AC+ ++ + + + + + +
Sbjct: 239 -LFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFV 297
Query: 312 GSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQ---KMQI 368
++L+D+Y KCG + ++ VF +K++ +W SMI+ + +G +EA+ +F+ K+ I
Sbjct: 298 SNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNI 357
Query: 369 EYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRL 428
+ P+ +TF+ L+AC H GLV KG F M N + ++PR+EHY C++DLLGRAGR
Sbjct: 358 N-DIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRF 416
Query: 429 NQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVA-LSN 487
++A E + M + + +W +LL++C++HG+ ++A++A L LN N G YVA ++N
Sbjct: 417 DEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNN--GGYVAMMAN 474
Query: 488 TLAAAEKWDSVSELREVMKERGISKDTACSWVGADS 523
W+ R+++K + K S + D+
Sbjct: 475 LYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDN 510
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 143/469 (30%), Positives = 239/469 (50%), Gaps = 45/469 (9%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ IH++++ TGF + ++ L +YL R A ++F + K + ++ MI Y
Sbjct: 316 GRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEY 375
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
++++ R + K D T + +L A A LGDL V + L
Sbjct: 376 NFLPDKAIDTYRMMDQDSVKPDEITVAAVLSA--------CATLGDLDTGVELHKLAIKA 427
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
+ ++ L + Y K I A +F + KNVIS TS+I+G L + C
Sbjct: 428 RLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAG-----LRLNNRC-- 480
Query: 231 QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAF 290
F A+I ++ ++ +PN T + + AC+ + A
Sbjct: 481 ----------FEALI----------------FLRQMKMTLQPNAITLTAALAACARIGAL 514
Query: 291 EVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGY 350
G+++ + +++T L +AL+DMY +CGR+ + F+ +K+V SW ++ GY
Sbjct: 515 MCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGY 573
Query: 351 GKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKP 410
+ G +ELF +M ++ V P+ +TF+S L C+ + +V +GL F ME +Y V P
Sbjct: 574 SERGQGSMVVELFDRM-VKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKME-DYGVTP 631
Query: 411 RMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASEL 470
++HYACVVDLLGRAG L +A +F+ +MP P+ VW ALL++CR+H ++ +L+A +
Sbjct: 632 NLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHI 691
Query: 471 FKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
F+L+ G Y+ L N A KW V+++R +MKE G++ D CSWV
Sbjct: 692 FELDKKS-VGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWV 739
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 203/414 (49%), Gaps = 56/414 (13%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G ++S L + + L ++++ L A VF + ++ L ++N ++G Y K
Sbjct: 113 GSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAK 172
Query: 111 QGQVEESLGLVRRLL-VSGEKLDGFTFSMILKASTSTSGRNVAPLGDL--GRIVHVQILK 167
QG +E++ L R+L V G K D +TF +L R + DL G+ VHV +++
Sbjct: 173 QGYFDEAMCLYHRMLWVGGVKPDVYTFPCVL--------RTCGGIPDLARGKEVHVHVVR 224
Query: 168 ADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAE 227
+++ D V AL YVK G + AR +FD M +++IS ++ISGY G+ +
Sbjct: 225 YGYELDIDVV--NALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEG- 281
Query: 228 CIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMV 287
LE++ M+ L+ P++ T S+I AC ++
Sbjct: 282 -------------------------------LELFFAMRGLSVDPDLMTLTSVISACELL 310
Query: 288 AAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMI 347
+G+ + + ++ T F I + ++L MY G ++ ++F M +K++ SWT+MI
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370
Query: 348 DGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYK 407
GY N PD+A++ ++ M + V P+ +T + LSACA G +D G+E+ ++
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQD-SVKPDEITVAAVLSACATLGDLDTGVEL-----HKLA 424
Query: 408 VKPRMEHYACV----VDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLH 457
+K R+ Y V +++ + +++A + +P R N W ++++ RL+
Sbjct: 425 IKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLRLN 477
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 10/205 (4%)
Query: 254 CATRSLEVYI----DMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHI 309
CA LE + MQ L + F +++ C A E G +V S + + +
Sbjct: 70 CANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGV 129
Query: 310 KLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIE 369
+LG+A + M+ + G +VD+ VF M ++N+FSW ++ GY K G+ DEA+ L+ +M
Sbjct: 130 ELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWV 189
Query: 370 YGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLN 429
GV P+ TF L C + +G E+ + Y + ++ ++ + + G +
Sbjct: 190 GGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVV-RYGYELDIDVVNALITMYVKCGDVK 248
Query: 430 QAWEFVMRMPERPNSDV--WAALLS 452
A RMP R D+ W A++S
Sbjct: 249 SARLLFDRMPRR---DIISWNAMIS 270
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 116/264 (43%), Gaps = 25/264 (9%)
Query: 50 SGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYL 109
+G +H +K + ++ L+ +Y KC C+ A +F ++ K + ++ +I
Sbjct: 416 TGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLR 475
Query: 110 KQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAP---LGDL--GRIVHVQ 164
+ E+L +R++ M L+ + T +A +G L G+ +H
Sbjct: 476 LNNRCFEALIFLRQM------------KMTLQPNAITLTAALAACARIGALMCGKEIHAH 523
Query: 165 ILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFK 224
+L+ V + DD L AL D YV+ GR+ A + F+ +K+V S L++GY +G
Sbjct: 524 VLRTGVGL--DDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGS 580
Query: 225 DAECIFQKTVDK----DIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASI 280
+F + V D + F +++ G SK S+ + L + M+ PN+ +A +
Sbjct: 581 MVVELFDRMVKSRVRPDEITFISLLCGCSK-SQMVRQGLMYFSKMEDYGVTPNLKHYACV 639
Query: 281 IGACSMVAAFEVGQQVQSQLMKTP 304
+ + + ++ TP
Sbjct: 640 VDLLGRAGELQEAHKFIQKMPVTP 663
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 145/429 (33%), Positives = 223/429 (51%), Gaps = 16/429 (3%)
Query: 94 RDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAP 153
R KT YN +I +YL G+ + SL L +L S + + TF ++KA+ S+ +
Sbjct: 47 RWKTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVS--- 103
Query: 154 LGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSL 213
G +H Q LK D + T+ Y + G + +R +FD + V++ SL
Sbjct: 104 ---YGVALHGQALKRGF--LWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSL 158
Query: 214 ISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDM---QRLNF 270
+ G A FQ+ D+V + +I G+SK A ++L V+ +M +R
Sbjct: 159 LDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHA-KALMVFGEMIQNERAVI 217
Query: 271 RPNISTFASIIGACSMV--AAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDS 328
PN +TF S++ +C+ +G+Q+ +M LG+AL+DMY K G + +
Sbjct: 218 TPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMA 277
Query: 329 RRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAH 388
+FD + K V +W ++I NG P +ALE+F+ M+ Y V PN +T L+ L+ACA
Sbjct: 278 LTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSY-VHPNGITLLAILTACAR 336
Query: 389 AGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWA 448
+ LVD G+++F S+ +EYK+ P EHY CVVDL+GRAG L A F+ +P P++ V
Sbjct: 337 SKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLG 396
Query: 449 ALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKER 508
ALL +C++H NTE+ +L L G YVALS A W ++R+ M E
Sbjct: 397 ALLGACKIHENTELGNTVGKQLIGLQPQ-HCGQYVALSTFNALDSNWSEAEKMRKAMIEA 455
Query: 509 GISKDTACS 517
GI K A S
Sbjct: 456 GIRKIPAYS 464
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 138/338 (40%), Gaps = 68/338 (20%)
Query: 30 PHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQV 89
P++ + ++ +S + S G +H LK GF+ + + + Y + L +R++
Sbjct: 84 PNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKM 143
Query: 90 FDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSG-----EKLDGFT--------- 135
FDD+ + + A N ++ A + G+++ + +R+ V+ ++GF+
Sbjct: 144 FDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKAL 203
Query: 136 --FSMILKASTSTSGRNVAPLGD--------------LGRIVHVQILKADVDVEKDDVLC 179
F +++ + N A LG+ +H ++ ++ +
Sbjct: 204 MVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLG-- 261
Query: 180 TALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDA------------- 226
TAL D Y K G + A T+FD + +K V + ++IS + G K A
Sbjct: 262 TALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVH 321
Query: 227 -----------ECIFQKTVDKDIVVFNAMIEGYS--KTSE---CATRSL---EVYID--- 264
C K VD I +F+++ Y TSE C + + +D
Sbjct: 322 PNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAAN 381
Query: 265 -MQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLM 301
+Q L F P+ S +++GAC + E+G V QL+
Sbjct: 382 FIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLI 419
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 132/477 (27%), Positives = 235/477 (49%), Gaps = 42/477 (8%)
Query: 44 NSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNY 103
NS G+ H LK G + + + L+ +Y C+ A +V DDL LS ++
Sbjct: 148 NSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSS 207
Query: 104 MIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHV 163
+ YL+ G +E L ++R+ + T+ L+ ++ N+A VH
Sbjct: 208 ALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQ------VHS 261
Query: 164 QILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLF 223
++++ + E + C AL + Y K G++ YA+ VFD +N+ +T+++ Y F
Sbjct: 262 RMVRFGFNAEVE--ACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSF 319
Query: 224 KDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGA 283
++A +F K K++ PN TFA ++ +
Sbjct: 320 EEALNLFSKMDTKEV--------------------------------PPNEYTFAILLNS 347
Query: 284 CSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSW 343
+ ++ + G + ++K+ + H+ +G+AL++MY+K G + D+R+ F M +++ +W
Sbjct: 348 IAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTW 407
Query: 344 TSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSME 403
+MI G +G EALE F +M I G +PN +TF+ L AC+H G V++GL F +
Sbjct: 408 NTMISGCSHHGLGREALEAFDRM-IFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLM 466
Query: 404 NEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMA 463
++ V+P ++HY C+V LL +AG A +F+ P + W LL++C + N +
Sbjct: 467 KKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLG 526
Query: 464 KLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWVG 520
K A + N G YV LSN A + +W+ V+++R +M RG+ K+ SW+G
Sbjct: 527 KKVAEYAIEKYPND-SGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIG 582
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 196/436 (44%), Gaps = 63/436 (14%)
Query: 35 LSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIK---LLVLYLKCNCLRYARQVFD 91
L+ L+ NS G++IH+H++ T + + L+ LY+KC AR++FD
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 92 DLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNV 151
+ ++ + ++ M+ Y G E L L + + SGE + ++ S S SGR
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRI- 152
Query: 152 APLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRI---------AYARTVFDVM 202
+ G+ H LK + ++ +V+N + A V D +
Sbjct: 153 ----EEGKQFHGCFLKYGL-----------ISHEFVRNTLVYMYSLCSGNGEAIRVLDDL 197
Query: 203 SEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVY 262
++ +S +SGY+ G FK+ + +KT ++D V N SL ++
Sbjct: 198 PYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTY----------LSSLRLF 247
Query: 263 IDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKC 322
+++ LN + QV S++++ F ++ ALI+MY KC
Sbjct: 248 SNLRDLN----------------------LALQVHSRMVRFGFNAEVEACGALINMYGKC 285
Query: 323 GRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSA 382
G+V+ ++RVFD H +N+F T+++D Y ++ +EAL LF KM + V PN TF
Sbjct: 286 GKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTK-EVPPNEYTFAIL 344
Query: 383 LSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERP 442
L++ A L+ +G ++ + + + + +V++ ++G + A + M R
Sbjct: 345 LNSIAELSLLKQG-DLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR- 402
Query: 443 NSDVWAALLSSCRLHG 458
+ W ++S C HG
Sbjct: 403 DIVTWNTMISGCSHHG 418
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 147/334 (44%), Gaps = 56/334 (16%)
Query: 25 NHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLR 84
N DFV ++ ++L+ + N + +HS +++ GF L+ +Y KC +
Sbjct: 230 NEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVL 289
Query: 85 YARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKAST 144
YA++VFDD + + ++ AY + EE+L L ++ + +TF+++L +
Sbjct: 290 YAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIA 349
Query: 145 STSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLC-TALTDSYVKNGRIAYARTVFDVMS 203
S L G ++H +LK+ ++ V+ AL + Y K+G I AR F M+
Sbjct: 350 ELS------LLKQGDLLHGLVLKSGY---RNHVMVGNALVNMYAKSGSIEDARKAFSGMT 400
Query: 204 EKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYI 263
+++++ ++ISG + GL ++A F D ++F I
Sbjct: 401 FRDIVTWNTMISGCSHHGLGREALEAF------DRMIFTGEI------------------ 436
Query: 264 DMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKT----PFFGHIKLGSALIDMY 319
PN TF ++ ACS + E G +QLMK P H + ++ +
Sbjct: 437 --------PNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHY---TCIVGLL 485
Query: 320 SKCGRVVDSRRVFDHMH----QKNVFSWTSMIDG 349
SK G D+ D M + +V +W ++++
Sbjct: 486 SKAGMFKDAE---DFMRTAPIEWDVVAWRTLLNA 516
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
Query: 274 ISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLG---SALIDMYSKCGRVVDSRR 330
I ++ C+ + +G+ + + L+ T + ++LI++Y KC V +R+
Sbjct: 31 IDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARK 90
Query: 331 VFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAG 390
+FD M ++NV SW +M+ GY +GF E L+LF+ M PN +C+++G
Sbjct: 91 LFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSG 150
Query: 391 LVDKG 395
+++G
Sbjct: 151 RIEEG 155
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/374 (33%), Positives = 208/374 (55%), Gaps = 10/374 (2%)
Query: 157 LGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISG 216
LG+ H QIL +D KD + T+L + Y G + A+ VFD K++ + S+++
Sbjct: 80 LGQRTHAQILLFGLD--KDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNA 137
Query: 217 YMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQ-----RLNFR 271
Y GL DA +F + +++++ ++ +I GY + +L+++ +MQ R
Sbjct: 138 YAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGK-YKEALDLFREMQLPKPNEAFVR 196
Query: 272 PNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRV 331
PN T ++++ AC + A E G+ V + + K I LG+ALIDMY+KCG + ++RV
Sbjct: 197 PNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRV 256
Query: 332 FDHM-HQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAG 390
F+ + +K+V ++++MI G DE +LF +M + PN VTF+ L AC H G
Sbjct: 257 FNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRG 316
Query: 391 LVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAAL 450
L+++G F+ M E+ + P ++HY C+VDL GR+G + +A F+ MP P+ +W +L
Sbjct: 317 LINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSL 376
Query: 451 LSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGI 510
LS R+ G+ + + A L +L+ GAYV LSN A +W V +R M+ +GI
Sbjct: 377 LSGSRMLGDIKTCEGALKRLIELDPMNS-GAYVLLSNVYAKTGRWMEVKCIRHEMEVKGI 435
Query: 511 SKDTACSWVGADSV 524
+K CS+V + V
Sbjct: 436 NKVPGCSYVEVEGV 449
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 154/389 (39%), Gaps = 79/389 (20%)
Query: 3 NGILRPFFSSRALFSPHQPF-----LQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSH 57
N I+R + + H P ++NH P L + N GQ H+
Sbjct: 28 NIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQ 87
Query: 58 ILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEES 117
IL G + + LL +Y C LR A++VFDD K L A+N ++ AY K G ++++
Sbjct: 88 ILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDA 147
Query: 118 LGLVRRL----------LVSG--------EKLDGFTFSMILKASTS-------TSGRNVA 152
L + L++G E LD F + K + + T ++
Sbjct: 148 RKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLS 207
Query: 153 PLGDLGRIVHVQILKADVD---VEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVIS 209
G LG + + + A +D VE D VL TAL D Y K G + A+ VF+ + K
Sbjct: 208 ACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSK---- 263
Query: 210 STSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMI---EGYSKTSECATRSLEVYIDMQ 266
KD+ ++AMI Y T EC +++ +M
Sbjct: 264 --------------------------KDVKAYSAMICCLAMYGLTDEC----FQLFSEMT 293
Query: 267 RL-NFRPNISTFASIIGACSMVAAFEVGQQVQSQLMK----TPFFGHIKLGSALIDMYSK 321
N PN TF I+GAC G+ +++ TP H ++D+Y +
Sbjct: 294 TSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHY---GCMVDLYGR 350
Query: 322 CGRVVDSRRVFDHM-HQKNVFSWTSMIDG 349
G + ++ M + +V W S++ G
Sbjct: 351 SGLIKEAESFIASMPMEPDVLIWGSLLSG 379
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 114/243 (46%), Gaps = 46/243 (18%)
Query: 259 LEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLM-----KTPFFGHIKLGS 313
+ VY+ M+ P+ TF ++ + +GQ+ +Q++ K PF + +
Sbjct: 47 ISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPF-----VRT 101
Query: 314 ALIDMYSKCG------RVV-------------------------DSRRVFDHMHQKNVFS 342
+L++MYS CG RV D+R++FD M ++NV S
Sbjct: 102 SLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVIS 161
Query: 343 WTSMIDGYGKNGFPDEALELFQKMQI----EYGVVPNFVTFLSALSACAHAGLVDKGLEI 398
W+ +I+GY G EAL+LF++MQ+ E V PN T + LSAC G +++G +
Sbjct: 162 WSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQG-KW 220
Query: 399 FQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHG 458
+ ++Y V+ + ++D+ + G L +A + + + ++A++ ++G
Sbjct: 221 VHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYG 280
Query: 459 NTE 461
T+
Sbjct: 281 LTD 283
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 132/371 (35%), Positives = 198/371 (53%), Gaps = 35/371 (9%)
Query: 157 LGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISG 216
+GRIVH + K E +++ T L Y KNG + YAR VFD M E+ ++ ++I G
Sbjct: 129 VGRIVHGMVKKLGFLYE-SELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGG 187
Query: 217 YMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNIST 276
Y + KD K +V+F + S C + RP +T
Sbjct: 188 YCSH---KDKG---NHNARKAMVLFR-------RFSCCGS------------GVRPTDTT 222
Query: 277 FASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIK--LGSALIDMYSKCGRVVDSRRVFDH 334
++ A S E+G V + K F + +G+AL+DMYSKCG + ++ VF+
Sbjct: 223 MVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFEL 282
Query: 335 MHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDK 394
M KNVF+WTSM G NG +E L +M E G+ PN +TF S LSA H GLV++
Sbjct: 283 MKVKNVFTWTSMATGLALNGRGNETPNLLNRMA-ESGIKPNEITFTSLLSAYRHIGLVEE 341
Query: 395 GLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSC 454
G+E+F+SM+ + V P +EHY C+VDLLG+AGR+ +A++F++ MP +P++ + +L ++C
Sbjct: 342 GIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNAC 401
Query: 455 RLHGNTEMAKLAASELFKLN------ANGRPGAYVALSNTLAAAEKWDSVSELREVMKER 508
++G T M + L ++ + YVALSN LA KW V +LR+ MKER
Sbjct: 402 SIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKER 461
Query: 509 GISKDTACSWV 519
I S+V
Sbjct: 462 RIKTRPGYSFV 472
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 157/404 (38%), Gaps = 85/404 (21%)
Query: 51 GQTIHSHILKTGFVPNTN-ISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYL 109
G+ +H + K GF+ + I LL Y K LRYAR+VFD++ ++T +N MIG Y
Sbjct: 130 GRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYC 189
Query: 110 KQG-----QVEESLGLVRRLLV--SGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVH 162
+++ L RR SG + T +L A + T L ++G +VH
Sbjct: 190 SHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTG------LLEIGSLVH 243
Query: 163 VQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGL 222
I K E D + TAL D Y K G + A +VF++M KNV + TS+ +G G
Sbjct: 244 GYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGR 303
Query: 223 FKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIG 282
+ + + + I +PN TF S++
Sbjct: 304 GNETPNLLNRMAESGI--------------------------------KPNEITFTSLLS 331
Query: 283 ACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFS 342
A + E G ++ MKT F V +H
Sbjct: 332 AYRHIGLVEEGIELFKS-MKTRF---------------------GVTPVIEH-------- 361
Query: 343 WTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSM 402
+ ++D GK G EA + M I+ P+ + S +AC+ G G EI +++
Sbjct: 362 YGCIVDLLGKAGRIQEAYQFILAMPIK----PDAILLRSLCNACSIYGETVMGEEIGKAL 417
Query: 403 -----ENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPER 441
E+E E Y + ++L G+ + + M ER
Sbjct: 418 LEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKER 461
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 150/535 (28%), Positives = 263/535 (49%), Gaps = 90/535 (16%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ IH +++++GF +++ +L +Y + L AR++FD++ ++ + +++ +I +Y++
Sbjct: 144 GEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQ 202
Query: 111 QGQVEESLGLVRRLLVSGE-KLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKAD 169
+ L L + ++ + + D T + +LKA T V D+GR VH ++
Sbjct: 203 SKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACT------VMEDIDVGRSVHGFSIRRG 256
Query: 170 VDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECI 229
D+ D +C +L D Y K + A VFD + +N++S S+++G+++ + +A +
Sbjct: 257 FDL-ADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEM 315
Query: 230 FQKTVDKDI---------------------------------------VVFNAMIEGYSK 250
F V + + V +++I+ Y+
Sbjct: 316 FHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTS 375
Query: 251 TS------------------ECAT---------RSLEVYIDMQRLNFRPNISTFASIIGA 283
S C+T RS E + PN T S++ A
Sbjct: 376 CSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNA 435
Query: 284 CSMVAAFEVGQQVQS-QLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFS 342
CS+ A + + ++ I +G++++D Y+KCG + +RR FD + +KN+ S
Sbjct: 436 CSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIIS 495
Query: 343 WTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSM 402
WT +I Y NG PD+AL LF +M+ + G PN VT+L+ALSAC H GLV KGL IF+SM
Sbjct: 496 WTVIISAYAINGLPDKALALFDEMK-QKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSM 554
Query: 403 ENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPE--RPNSDVWAALLSSCRLHGNT 460
E KP ++HY+C+VD+L RAG ++ A E + +PE + + W A+LS CR
Sbjct: 555 VEEDH-KPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCR----N 609
Query: 461 EMAKL-----AASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGI 510
KL +E+ +L G Y+ S+T AA + W+ V+ +R ++KER +
Sbjct: 610 RFKKLIITSEVVAEVLELEPLCSSG-YLLASSTFAAEKSWEDVAMMRRLVKERKV 663
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 180/426 (42%), Gaps = 82/426 (19%)
Query: 76 LYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFT 135
Y+KC L + FD + + ++N ++ L G EE L +L V G + + T
Sbjct: 70 FYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTST 129
Query: 136 FSMILKASTSTSGRNVAPLGDLGRIVHVQILKAD---VDVEKDDVLCTALTDSYVKNGRI 192
+++ A S L G +H ++++ + ++ +LC Y + +
Sbjct: 130 LVLVIHACRS--------LWFDGEKIHGYVIRSGFCGISSVQNSILCM-----YADSDSL 176
Query: 193 AYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTS 252
+ AR +FD MSE++VIS ++ +I Y ++
Sbjct: 177 S-ARKLFDEMSERDVIS-------------------------------WSVVIRSYVQSK 204
Query: 253 ECATRSLEVYIDM-QRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPF-FGHIK 310
E L+++ +M P+ T S++ AC+++ +VG+ V ++ F +
Sbjct: 205 E-PVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVF 263
Query: 311 LGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEY 370
+ ++LIDMYSK V + RVFD +N+ SW S++ G+ N DEALE+F M ++
Sbjct: 264 VCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLM-VQE 322
Query: 371 GVVPNFVTFLSALSACA-----------HAGLVDKGLE----IFQSMENEYKVKPRMEHY 415
V + VT +S L C H ++ +G E S+ + Y ++
Sbjct: 323 AVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDA 382
Query: 416 ACVVDL---------------LGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNT 460
V+D L AGR ++A M + PN+ +LL++C + +
Sbjct: 383 GTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSADL 442
Query: 461 EMAKLA 466
+K A
Sbjct: 443 RTSKWA 448
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 35/215 (16%)
Query: 181 ALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVV 240
++ D Y+K G + FD M+ ++ +S ++ G ++ G ++ F K
Sbjct: 66 SIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSK-------- 117
Query: 241 FNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQL 300
L V+ F PN ST +I AC + F+ G+++ +
Sbjct: 118 ------------------LRVW------GFEPNTSTLVLVIHACRSLW-FD-GEKIHGYV 151
Query: 301 MKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEAL 360
+++ F G + ++++ MY+ + +R++FD M +++V SW+ +I Y ++ P L
Sbjct: 152 IRSGFCGISSVQNSILCMYADSDSL-SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGL 210
Query: 361 ELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKG 395
+LF++M E P+ VT S L AC +D G
Sbjct: 211 KLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVG 245
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 117/280 (41%), Gaps = 42/280 (15%)
Query: 46 DTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMI 105
+ P ++IH I++ G+ N L+ Y C+ + A V D + K + + + MI
Sbjct: 342 EQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMI 401
Query: 106 GAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQI 165
G+ +E++ + + + + T +L A + ++ + G + +
Sbjct: 402 SGLAHAGRSDEAISIFCHMR---DTPNAITVISLLNACSVSADLRTSKWAH-GIAIRRSL 457
Query: 166 LKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKD 225
D+ V T++ D+Y K G I AR FD ++EKN+IS T +IS Y GL
Sbjct: 458 AINDISVG------TSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGL--- 508
Query: 226 AECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACS 285
DK + +F+ +M++ + PN T+ + + AC+
Sbjct: 509 --------PDKALALFD---------------------EMKQKGYTPNAVTYLAALSACN 539
Query: 286 MVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRV 325
+ G + +++ ++ S ++DM S+ G +
Sbjct: 540 HGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEI 579
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 312 GSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYG 371
G+++ D Y KCG + R FD M+ ++ SW ++ G GF +E L F K+++ +G
Sbjct: 64 GNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRV-WG 122
Query: 372 VVPNFVTFLSALSAC 386
PN T + + AC
Sbjct: 123 FEPNTSTLVLVIHAC 137
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 149/475 (31%), Positives = 232/475 (48%), Gaps = 48/475 (10%)
Query: 52 QTIHSHILKTGFVPNTNIS---IKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAY 108
+ IH+ +L+T + N+++ + L L L + Y+ +VF + TLS N MI A+
Sbjct: 28 RQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMIRAF 87
Query: 109 LKQGQVEESLGLVRRLLV-SGEKLDGFTFSMILKASTSTSGRNVAPLGDL--GRIVHVQI 165
E L R L S + + S LK + GDL G +H +I
Sbjct: 88 SLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKS--------GDLLGGLQIHGKI 139
Query: 166 LKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKD 225
D +L T L D Y A VFD + +++ +S L S Y+ +D
Sbjct: 140 FSDGF--LSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRD 197
Query: 226 AECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACS 285
+F K + ++G K P+ T + AC+
Sbjct: 198 VLVLFDKMKND--------VDGCVK---------------------PDGVTCLLALQACA 228
Query: 286 MVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTS 345
+ A + G+QV + + G + L + L+ MYS+CG + + +VF M ++NV SWT+
Sbjct: 229 NLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTA 288
Query: 346 MIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMEN- 404
+I G NGF EA+E F +M +++G+ P T LSAC+H+GLV +G+ F M +
Sbjct: 289 LISGLAMNGFGKEAIEAFNEM-LKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSG 347
Query: 405 EYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAK 464
E+K+KP + HY CVVDLLGRA L++A+ + M +P+S +W LL +CR+HG+ E+ +
Sbjct: 348 EFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGE 407
Query: 465 LAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
S L +L A G YV L NT + KW+ V+ELR +MKE+ I CS +
Sbjct: 408 RVISHLIELKAE-EAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAI 461
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 147/346 (42%), Gaps = 57/346 (16%)
Query: 3 NGILRPFFSSRALFSPHQPF-----LQNHDFVPHSTLLSN-TLQYYINSDTPSSGQTIHS 56
N ++R F S+ +P + F L+ + +P + L S+ L+ I S G IH
Sbjct: 81 NTMIRAFSLSQ---TPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHG 137
Query: 57 HILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEE 116
I GF+ ++ + L+ LY C A +VFD++ + ++N + YL+ + +
Sbjct: 138 KIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRD 197
Query: 117 SLGLVRRLL--VSG-EKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVE 173
L L ++ V G K DG T + L+A N+ L D G+ VH I + +
Sbjct: 198 VLVLFDKMKNDVDGCVKPDGVTCLLALQACA-----NLGAL-DFGKQVHDFIDENGLSGA 251
Query: 174 KDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDA------- 226
+ L L Y + G + A VF M E+NV+S T+LISG G K+A
Sbjct: 252 LN--LSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEM 309
Query: 227 -----------------ECIFQKTVDKDIVVFNAMIEGYSKTSE------CATRSL---- 259
C V + ++ F+ M G K C L
Sbjct: 310 LKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRAR 369
Query: 260 ---EVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMK 302
+ Y ++ + +P+ + + +++GAC + E+G++V S L++
Sbjct: 370 LLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIE 415
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 141/472 (29%), Positives = 241/472 (51%), Gaps = 46/472 (9%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLR-DKTLSAYNYMIGAYLK 110
+ +H+ +LK G I ++ Y C + A++VFD L K L ++N MI + K
Sbjct: 223 KQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSK 282
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
E + L ++ + D +T++ +L A + + G+ +H ++K +
Sbjct: 283 HELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQI------FGKSLHGMVIKKGL 336
Query: 171 DVEKDDVLCTALTDSYVK--NGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAEC 228
E+ AL Y++ G + A ++F+ + K++IS S+I+G+ +GL +DA
Sbjct: 337 --EQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVK 394
Query: 229 IFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVA 288
F Y ++SE + + F++++ +CS +A
Sbjct: 395 FFS----------------YLRSSE----------------IKVDDYAFSALLRSCSDLA 422
Query: 289 AFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKN-VFSWTSMI 347
++GQQ+ + K+ F + + S+LI MYSKCG + +R+ F + K+ +W +MI
Sbjct: 423 TLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMI 482
Query: 348 DGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYK 407
GY ++G +L+LF +M V + VTF + L+AC+H GL+ +GLE+ ME YK
Sbjct: 483 LGYAQHGLGQVSLDLFSQM-CNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYK 541
Query: 408 VKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAA 467
++PRMEHYA VDLLGRAG +N+A E + MP P+ V L CR G EMA A
Sbjct: 542 IQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVA 601
Query: 468 SELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
+ L ++ YV+LS+ + +KW+ + ++++MKERG+ K SW+
Sbjct: 602 NHLLEIEPEDHF-TYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWI 652
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 164/362 (45%), Gaps = 52/362 (14%)
Query: 55 HSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQV 114
H + +K G + + +S ++L Y+K L YA +FD++ + ++N MI Y G++
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 115 EESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEK 174
E++ L + SG +DG++FS +LK S DLG VH ++K E
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRF------DLGEQVHGLVIKG--GYEC 134
Query: 175 DDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTV 234
+ + ++L D Y K R+ A F +SE N +S +LI+G++ K A +
Sbjct: 135 NVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLME 194
Query: 235 DKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQ 294
K V +A TFA ++ + +
Sbjct: 195 MKAAVTMDA-------------------------------GTFAPLLTLLDDPMFCNLLK 223
Query: 295 QVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHM-HQKNVFSWTSMIDGYGKN 353
QV ++++K I + +A+I Y+ CG V D++RVFD + K++ SW SMI G+ K+
Sbjct: 224 QVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKH 283
Query: 354 GFPDEALELFQKMQIEYGVVPNFVTFLSALSACA-----------HAGLVDKGLEIFQSM 402
+ A ELF +MQ + V + T+ LSAC+ H ++ KGLE S
Sbjct: 284 ELKESAFELFIQMQ-RHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSA 342
Query: 403 EN 404
N
Sbjct: 343 TN 344
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/425 (20%), Positives = 183/425 (43%), Gaps = 72/425 (16%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ +H ++K G+ N + L+ +Y KC + A + F ++ + ++N +I +++
Sbjct: 120 GEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQ 179
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPL---------GDLGRIV 161
++ + L+ M +KA+ + APL +L + V
Sbjct: 180 VRDIKTAFWLLGL--------------MEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQV 225
Query: 162 HVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQG 221
H ++LK + ++ + +C A+ SY G ++ A+ VFD + S LIS
Sbjct: 226 HAKVLK--LGLQHEITICNAMISSYADCGSVSDAKRVFDGLG-----GSKDLIS------ 272
Query: 222 LFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASII 281
+N+MI G+SK E + E++I MQR +I T+ ++
Sbjct: 273 -------------------WNSMIAGFSK-HELKESAFELFIQMQRHWVETDIYTYTGLL 312
Query: 282 GACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSK--CGRVVDSRRVFDHMHQKN 339
ACS G+ + ++K +ALI MY + G + D+ +F+ + K+
Sbjct: 313 SACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKD 372
Query: 340 VFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIF 399
+ SW S+I G+ + G ++A++ F ++ V ++ F + L +C+ + G +I
Sbjct: 373 LISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDY-AFSALLRSCSDLATLQLGQQIH 431
Query: 400 QS------MENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSS 453
+ NE+ + + Y+ + G + A + ++ + ++ W A++
Sbjct: 432 ALATKSGFVSNEFVISSLIVMYS-------KCGIIESARKCFQQISSKHSTVAWNAMILG 484
Query: 454 CRLHG 458
HG
Sbjct: 485 YAQHG 489
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDK-TLSAYNYMIGAYL 109
GQ IH+ K+GFV N + L+V+Y KC + AR+ F + K + A+N MI Y
Sbjct: 427 GQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYA 486
Query: 110 KQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTST 146
+ G + SL L ++ KLD TF+ IL A + T
Sbjct: 487 QHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHT 523
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 137/484 (28%), Positives = 243/484 (50%), Gaps = 50/484 (10%)
Query: 44 NSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNY 103
+S +G +H ++K G + S L+ Y KC + AR+VF+ + D+ L +N
Sbjct: 154 DSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNA 213
Query: 104 MIGAYLKQGQVEESLGLVRRLLVSGEKLDG--FTFSMILKASTSTSGRNVAPLGDLGRIV 161
++ +Y+ G ++E+ GL++ + + G FTFS +L A G+ +
Sbjct: 214 LVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQGKQI---------- 263
Query: 162 HVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQG 221
H + K V + D + TAL + Y K+ ++ AR
Sbjct: 264 HAILFK--VSYQFDIPVATALLNMYAKSNHLSDAR------------------------- 296
Query: 222 LFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASII 281
EC F+ V +++V +NAMI G+++ E ++ ++ M N +P+ TFAS++
Sbjct: 297 -----EC-FESMVVRNVVSWNAMIVGFAQNGE-GREAMRLFGQMLLENLQPDELTFASVL 349
Query: 282 GACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVF 341
+C+ +A +QVQ+ + K + + ++LI YS+ G + ++ F + + ++
Sbjct: 350 SSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLV 409
Query: 342 SWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQS 401
SWTS+I +GF +E+L++F+ M + + P+ +TFL LSAC+H GLV +GL F+
Sbjct: 410 SWTSVIGALASHGFAEESLQMFESMLQK--LQPDKITFLEVLSACSHGGLVQEGLRCFKR 467
Query: 402 MENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTE 461
M YK++ EHY C++DLLGRAG +++A + + MP P++ AA C +H E
Sbjct: 468 MTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRE 527
Query: 462 MAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDT-ACSWVG 520
K A +L ++ +P Y LSN + W+ + LR+ + + T CSW+G
Sbjct: 528 SMKWGAKKLLEIEPT-KPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCSWLG 586
Query: 521 ADSV 524
S+
Sbjct: 587 DYSI 590
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 142/301 (47%), Gaps = 22/301 (7%)
Query: 213 LISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGY-SKTSECATRSLEVYIDMQRLNFR 271
L+ Y F DA+ +F + ++IV +N +I G + + R+ + + R+ F
Sbjct: 77 LLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILF- 135
Query: 272 PNIS----TFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVD 327
++S +F +I C+ + G Q+ ++K ++L+ Y KCG +V+
Sbjct: 136 TDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVE 195
Query: 328 SRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYG-VVPNFVTFLSALSAC 386
+RRVF+ + +++ W +++ Y NG DEA L + M + ++ TF S LSAC
Sbjct: 196 ARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC 255
Query: 387 AHAGLVDKGLEIFQSMENEYKVKPRME--HYACVVDLLGRAGRLNQAWEFVMRMPERPNS 444
+++G +I + +KV + + ++++ ++ L+ A E M R N
Sbjct: 256 R----IEQGKQIHAIL---FKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVR-NV 307
Query: 445 DVWAALLSSCRLHGN-TEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELRE 503
W A++ +G E +L L + N +P + ++ L++ K+ ++ E+++
Sbjct: 308 VSWNAMIVGFAQNGEGREAMRLFGQMLLE---NLQPDE-LTFASVLSSCAKFSAIWEIKQ 363
Query: 504 V 504
V
Sbjct: 364 V 364
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 144/478 (30%), Positives = 247/478 (51%), Gaps = 46/478 (9%)
Query: 54 IHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQ 113
+H+ LK GF +T L++ Y+K + AR++FD++ + + ++ +I Y G+
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 114 VEESLGLVRRLLVSGE-KLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDV 172
+ +L + +++ + +TF+ + KA ++ + + G+ +H ++ + +
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRI------GKNIHARLEIS--GL 162
Query: 173 EKDDVLCTALTDSYVKNGRIAYARTVFDVM--SEKNVISSTSLISGYMNQGLFKDAECIF 230
++ V+ ++L D Y K + AR VFD M +NV+S TS+I+ Y +A +F
Sbjct: 163 RRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELF 222
Query: 231 QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAF 290
+ FNA + TS+ R N AS+I ACS +
Sbjct: 223 RS--------FNAAL-----TSD-----------------RANQFMLASVISACSSLGRL 252
Query: 291 EVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGY 350
+ G+ + + + + + ++L+DMY+KCG + + ++F + +V S+TSMI
Sbjct: 253 QWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAK 312
Query: 351 GKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKP 410
K+G + A++LF +M + + PN+VT L L AC+H+GLV++GLE M +Y V P
Sbjct: 313 AKHGLGEAAVKLFDEM-VAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVP 371
Query: 411 RMEHYACVVDLLGRAGRLNQAWEF--VMRMPERPNSDVWAALLSSCRLHGNTEMAKLAAS 468
HY CVVD+LGR GR+++A+E + + + +W ALLS+ RLHG E+ A+
Sbjct: 372 DSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASK 431
Query: 469 ELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV-GADSVY 525
L + N AY+ALSN A + W+ LR MK G K+ ACSW+ DSVY
Sbjct: 432 RLIQSNQQ-VTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVY 488
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 136/324 (41%), Gaps = 78/324 (24%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDL--RDKTLSAYNYMIGAY 108
G+ IH+ + +G N +S L+ +Y KCN + AR+VFD + + + ++ MI AY
Sbjct: 150 GKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAY 209
Query: 109 LKQGQVEESLGLVRRL--LVSGEKLDGFTFSMILKASTSTSGRNVAPLGDL--GRIVHVQ 164
+ + E++ L R ++ ++ + F + ++ A +S LG L G++ H
Sbjct: 210 AQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSS--------LGRLQWGKVAHGL 261
Query: 165 ILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFK 224
+ + E + V+ T+L D Y K G ++ A +F + +VIS TS+I GL +
Sbjct: 262 VTRG--GYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGE 319
Query: 225 DAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGAC 284
A + +F+ M+ G R+N PN T ++ AC
Sbjct: 320 AA-----------VKLFDEMVAG-------------------RIN--PNYVTLLGVLHAC 347
Query: 285 SMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWT 344
S G + S M K G V DSR +T
Sbjct: 348 SHSGLVNEGLEYLSL------------------MAEKYGVVPDSRH------------YT 377
Query: 345 SMIDGYGKNGFPDEALELFQKMQI 368
++D G+ G DEA EL + +++
Sbjct: 378 CVVDMLGRFGRVDEAYELAKTIEV 401
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/310 (36%), Positives = 180/310 (58%), Gaps = 5/310 (1%)
Query: 211 TSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNF 270
+ I+ Y G F++A +F + ++ + +NA+I G + A ++E+++DM+R
Sbjct: 156 SGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGR-ANEAVEMFVDMKRSGL 214
Query: 271 RPNISTFASIIGACSMVAAFEVGQQVQSQLM--KTPFFGHIKLGSALIDMYSKCGRVVDS 328
P+ T S+ +C + + Q+ ++ KT I + ++LIDMY KCGR+ +
Sbjct: 215 EPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLA 274
Query: 329 RRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAH 388
+F+ M Q+NV SW+SMI GY NG EALE F++M+ E+GV PN +TF+ LSAC H
Sbjct: 275 SHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMR-EFGVRPNKITFVGVLSACVH 333
Query: 389 AGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWA 448
GLV++G F M++E++++P + HY C+VDLL R G+L +A + V MP +PN VW
Sbjct: 334 GGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWG 393
Query: 449 ALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKER 508
L+ C G+ EMA+ A + +L G YV L+N A W V +R++MK +
Sbjct: 394 CLMGGCEKFGDVEMAEWVAPYMVELEP-WNDGVYVVLANVYALRGMWKDVERVRKLMKTK 452
Query: 509 GISKDTACSW 518
++K A S+
Sbjct: 453 KVAKIPAYSY 462
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 157/361 (43%), Gaps = 52/361 (14%)
Query: 3 NGILRPFFSSRALFSPHQPFLQ--NHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILK 60
N I+R + + Q +L +P L ++ + + G+ +HS ++
Sbjct: 86 NNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVR 145
Query: 61 TGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGL 120
GFV + + LY K AR+VFD+ ++ L ++N +IG G+ E++ +
Sbjct: 146 LGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEM 205
Query: 121 VRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRI--VHVQILKADVDVEKDDVL 178
+ SG + D FT ++ + S G LGDL +H +L+A + + D ++
Sbjct: 206 FVDMKRSGLEPDDFT---MVSVTASCGG-----LGDLSLAFQLHKCVLQAKTEEKSDIMM 257
Query: 179 CTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDI 238
+L D Y K GR+ A +F+ M ++NV+S +S+I GY G
Sbjct: 258 LNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANG----------------- 300
Query: 239 VVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQ---- 294
N + +LE + M+ RPN TF ++ AC E G+
Sbjct: 301 ---NTL------------EALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFA 345
Query: 295 QVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQK-NVFSWTSMIDGYGKN 353
++S+ P H ++D+ S+ G++ ++++V + M K NV W ++ G K
Sbjct: 346 MMKSEFELEPGLSHY---GCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKF 402
Query: 354 G 354
G
Sbjct: 403 G 403
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 116/234 (49%), Gaps = 8/234 (3%)
Query: 240 VFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQ 299
++N ++ Y + E +++VY+ M R P+ + +I A + F +G+++ S
Sbjct: 84 LWNNIMRSYIR-HESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSV 142
Query: 300 LMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEA 359
++ F G S I +Y K G ++R+VFD ++ + SW ++I G G +EA
Sbjct: 143 AVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEA 202
Query: 360 LELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQS-MENEYKVKPRMEHYACV 418
+E+F M+ G+ P+ T +S ++C G + ++ + ++ + + K + +
Sbjct: 203 VEMFVDMK-RSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSL 261
Query: 419 VDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFK 472
+D+ G+ GR++ A M +R N W++++ +GNT L A E F+
Sbjct: 262 IDMYGKCGRMDLASHIFEEMRQR-NVVSWSSMIVGYAANGNT----LEALECFR 310
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 151/481 (31%), Positives = 250/481 (51%), Gaps = 26/481 (5%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G +H +K+GF + L+ +Y +C A ++F+ + K++ YN I ++
Sbjct: 148 GMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLME 207
Query: 111 QG---QVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILK 167
G V L+R+ S E+ + TF + A S GR +H ++K
Sbjct: 208 NGVMNLVPSVFNLMRKF--SSEEPNDVTFVNAITACASLLNLQ------YGRQLHGLVMK 259
Query: 168 ADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSE-KNVISSTSLISGYMNQGLFKDA 226
+ E ++ TAL D Y K A VF + + +N+IS S+ISG M G + A
Sbjct: 260 KEFQFET--MVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETA 317
Query: 227 ECIFQKT----VDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIG 282
+F+K + D +N++I G+S+ + + + + M + P++ S++
Sbjct: 318 VELFEKLDSEGLKPDSATWNSLISGFSQLGK-VIEAFKFFERMLSVVMVPSLKCLTSLLS 376
Query: 283 ACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKN--- 339
ACS + + G+++ ++K I + ++LIDMY KCG +RR+FD K
Sbjct: 377 ACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDP 436
Query: 340 VFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIF 399
VF W MI GYGK+G + A+E+F+ ++ E V P+ TF + LSAC+H G V+KG +IF
Sbjct: 437 VF-WNVMISGYGKHGECESAIEIFELLR-EEKVEPSLATFTAVLSACSHCGNVEKGSQIF 494
Query: 400 QSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGN 459
+ M+ EY KP EH C++DLLGR+GRL +A E + +M E +S ++LL SCR H +
Sbjct: 495 RLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLD 553
Query: 460 TEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
+ + AA +L +L P +V LS+ AA E+W+ V +R+V+ ++ + K S
Sbjct: 554 PVLGEEAAMKLAELEPE-NPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLSLS 612
Query: 520 G 520
G
Sbjct: 613 G 613
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 162/353 (45%), Gaps = 44/353 (12%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ +H+ ++KTGF + + L+ +Y+K + A +V D++ ++ +++ N + L+
Sbjct: 50 GRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLE 109
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
G ++ + VSG ++ T + +L G G +H +K+
Sbjct: 110 NGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEG---------GMQLHCLAMKSGF 160
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
++E + T+L Y + G A +F+ + K+V++ + ISG M G+
Sbjct: 161 EMEV--YVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPS-- 216
Query: 231 QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAF 290
VFN M + S+ PN TF + I AC+ +
Sbjct: 217 ---------VFNLMRKFSSE--------------------EPNDVTFVNAITACASLLNL 247
Query: 291 EVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQ-KNVFSWTSMIDG 349
+ G+Q+ +MK F +G+ALIDMYSKC + VF + +N+ SW S+I G
Sbjct: 248 QYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISG 307
Query: 350 YGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSM 402
NG + A+ELF+K+ E G+ P+ T+ S +S + G V + + F+ M
Sbjct: 308 MMINGQHETAVELFEKLDSE-GLKPDSATWNSLISGFSQLGKVIEAFKFFERM 359
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 166/369 (44%), Gaps = 63/369 (17%)
Query: 121 VRRLLVSGEKLD--------GFTFSMILKASTSTSGRNVAPLGDL--GRIVHVQILKADV 170
V L+ G LD FTF +LK+ A LGD+ GRI+H Q++K
Sbjct: 11 VSNLVTGGTSLDVILSHSPNKFTFPPLLKS--------CAKLGDVVQGRILHAQVVKTGF 62
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
V D TAL Y+K ++ A V D M E+ + S + +SG + G +DA +F
Sbjct: 63 FV--DVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMF 120
Query: 231 QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAF 290
G ++ S S+ T AS++G C +
Sbjct: 121 ----------------GDARVSGSGMNSV----------------TVASVLGGCGDI--- 145
Query: 291 EVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGY 350
E G Q+ MK+ F + +G++L+ MYS+CG V + R+F+ + K+V ++ + I G
Sbjct: 146 EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGL 205
Query: 351 GKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQ-SMENEYKVK 409
+NG + +F M+ PN VTF++A++ACA + G ++ M+ E++ +
Sbjct: 206 MENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFE 265
Query: 410 PRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASE 469
+ ++D+ + A+ + + N W +++S ++G E A E
Sbjct: 266 TMVG--TALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHE----TAVE 319
Query: 470 LF-KLNANG 477
LF KL++ G
Sbjct: 320 LFEKLDSEG 328
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 13/178 (7%)
Query: 29 VPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQ 88
VP L++ L + T +G+ IH H++K + + L+ +Y+KC +AR+
Sbjct: 365 VPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARR 424
Query: 89 VFDDLRDKTLSA--YNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDG--FTFSMILKAST 144
+FD K +N MI Y K G+ E ++ + L+ EK++ TF+ +L A +
Sbjct: 425 IFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFE--LLREEKVEPSLATFTAVLSACS 482
Query: 145 STSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVM 202
NV + R++ + + + C + D ++GR+ A+ V D M
Sbjct: 483 HCG--NVEKGSQIFRLMQEEY---GYKPSTEHIGC--MIDLLGRSGRLREAKEVIDQM 533
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 138/490 (28%), Positives = 236/490 (48%), Gaps = 54/490 (11%)
Query: 46 DTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCL----RYARQVFDDLRDKTLSAY 101
+T ++ HS + G NT KLL +L L YA +FD + Y
Sbjct: 22 NTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVY 81
Query: 102 NYMIGAYLKQGQVEESLGLVRRLLVSGEKLDG-----FTFSMILKASTSTSGRNVAPLGD 156
+ MI + Q LGL LL+ E+ + TF ++ A A
Sbjct: 82 DTMIRICSRSSQ--PHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLK------ACFFS 133
Query: 157 LGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISG 216
+G+ +H ++K V L+DS+V+ G ++
Sbjct: 134 VGKQIHCWVVKNGV----------FLSDSHVQTG----------------------VLRI 161
Query: 217 YMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNIST 276
Y+ L DA +F + D+V ++ ++ GY + + LEV+ +M P+ +
Sbjct: 162 YVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCG-LGSEGLEVFREMLVKGLEPDEFS 220
Query: 277 FASIIGACSMVAAFEVGQQVQSQLMKTPFF-GHIKLGSALIDMYSKCGRVVDSRRVFDHM 335
+ + AC+ V A G+ + + K + + +G+AL+DMY+KCG + + VF +
Sbjct: 221 VTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKL 280
Query: 336 HQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKG 395
++NVFSW ++I GY G+ +A+ ++++ E G+ P+ V L L+ACAH G +++G
Sbjct: 281 TRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEG 340
Query: 396 LEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCR 455
+ ++ME Y++ P+ EHY+C+VDL+ RAGRL+ A + +MP +P + VW ALL+ CR
Sbjct: 341 RSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCR 400
Query: 456 LHGNTEMAKLAASELFKL---NANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISK 512
H N E+ +LA L L N A V LSN + ++ S++R ++++RG+ K
Sbjct: 401 THKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRK 460
Query: 513 DTACSWVGAD 522
S + D
Sbjct: 461 TPGWSVLEVD 470
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 131/439 (29%), Positives = 221/439 (50%), Gaps = 41/439 (9%)
Query: 81 NCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMIL 140
N + YA +F + D +N MI Y+ EE+L ++ G + D FT+ +L
Sbjct: 80 NSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLL 139
Query: 141 KASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFD 200
KA T G+ +H Q+ K + +E D + +L + Y + G + + VF+
Sbjct: 140 KACTRLKSIRE------GKQIHGQVFK--LGLEADVFVQNSLINMYGRCGEMELSSAVFE 191
Query: 201 VMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLE 260
+ K S +S++S G++ +EC+ ++F M S+T
Sbjct: 192 KLESKTAASWSSMVSARAGMGMW--SECL---------LLFRGMC---SET--------- 228
Query: 261 VYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYS 320
N + S S + AC+ A +G + L++ +I + ++L+DMY
Sbjct: 229 --------NLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYV 280
Query: 321 KCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFL 380
KCG + + +F M ++N ++++MI G +G + AL +F KM I+ G+ P+ V ++
Sbjct: 281 KCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKM-IKEGLEPDHVVYV 339
Query: 381 SALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPE 440
S L+AC+H+GLV +G +F M E KV+P EHY C+VDLLGRAG L +A E + +P
Sbjct: 340 SVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPI 399
Query: 441 RPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSE 500
N +W LS CR+ N E+ ++AA EL KL+++ PG Y+ +SN + + WD V+
Sbjct: 400 EKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHN-PGDYLLISNLYSQGQMWDDVAR 458
Query: 501 LREVMKERGISKDTACSWV 519
R + +G+ + S V
Sbjct: 459 TRTEIAIKGLKQTPGFSIV 477
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 138/338 (40%), Gaps = 77/338 (22%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ IH + K G + + L+ +Y +C + + VF+ L KT ++++ M+ A
Sbjct: 151 GKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAG 210
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMI--LKASTSTSGRNVAPLGDLGRIVHVQILKA 168
G E L L+ R + S L M+ L A +T N LG +H +L+
Sbjct: 211 MGMWSECL-LLFRGMCSETNLKAEESGMVSALLACANTGALN------LGMSIHGFLLRN 263
Query: 169 DVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAEC 228
++ + ++ T+L D YVK G + A +F M ++N ++ +++ISG G
Sbjct: 264 ISEL--NIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHG------- 314
Query: 229 IFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVA 288
EG S +L ++ M + P+ + S++ ACS
Sbjct: 315 -----------------EGES--------ALRMFSKMIKEGLEPDHVVYVSVLNACSHSG 349
Query: 289 AFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMID 348
+ G++V ++++K G+V + + ++D
Sbjct: 350 LVKEGRRVFAEMLKE-------------------GKV-----------EPTAEHYGCLVD 379
Query: 349 GYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSAC 386
G+ G +EALE Q + IE N V + + LS C
Sbjct: 380 LLGRAGLLEEALETIQSIPIE----KNDVIWRTFLSQC 413
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 212 bits (539), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 139/488 (28%), Positives = 237/488 (48%), Gaps = 47/488 (9%)
Query: 35 LSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLR 94
++ L D G+ +H ++ +G N I L+ +Y K + +R+V +
Sbjct: 365 FTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 424
Query: 95 DKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPL 154
+ + A+N +IG Y + +++L + + V G + T +L A + P
Sbjct: 425 RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC-------LLP- 476
Query: 155 GDL---GRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISST 211
GDL G+ +H I+ A + +D +VKN
Sbjct: 477 GDLLERGKPLHAYIVSAGFE-----------SDEHVKN---------------------- 503
Query: 212 SLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFR 271
SLI+ Y G ++ +F +++I+ +NAM+ + L++ M+
Sbjct: 504 SLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGH-GEEVLKLVSKMRSFGVS 562
Query: 272 PNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRV 331
+ +F+ + A + +A E GQQ+ +K F + +A DMYSKCG + + ++
Sbjct: 563 LDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKM 622
Query: 332 FDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGL 391
+++ SW +I G++G+ +E F +M +E G+ P VTF+S L+AC+H GL
Sbjct: 623 LPPSVNRSLPSWNILISALGRHGYFEEVCATFHEM-LEMGIKPGHVTFVSLLTACSHGGL 681
Query: 392 VDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALL 451
VDKGL + + ++ ++P +EH CV+DLLGR+GRL +A F+ +MP +PN VW +LL
Sbjct: 682 VDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLL 741
Query: 452 SSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGIS 511
+SC++HGN + + AA L KL YV SN A +W+ V +R+ M + I
Sbjct: 742 ASCKIHGNLDRGRKAAENLSKLEPE-DDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIK 800
Query: 512 KDTACSWV 519
K ACSWV
Sbjct: 801 KKQACSWV 808
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 203/469 (43%), Gaps = 71/469 (15%)
Query: 49 SSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAY 108
S G+ I ++K+G + L+ + + YA +FD + ++ ++N + AY
Sbjct: 177 SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAY 236
Query: 109 LKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKA 168
+ G +EES + + ++++ T S +L + GR +H ++K
Sbjct: 237 AQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQK------WGRGIHGLVVKM 290
Query: 169 DVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAEC 228
D +C L Y GR A VF M K++IS SL++ ++N G DA
Sbjct: 291 GFD--SVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALG 348
Query: 229 IFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVA 288
+ + V N TF S + AC
Sbjct: 349 LLCSMISSGKSV--------------------------------NYVTFTSALAACFTPD 376
Query: 289 AFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMID 348
FE G+ + ++ + F + +G+AL+ MY K G + +SRRV M +++V +W ++I
Sbjct: 377 FFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIG 436
Query: 349 GYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSAC------------AHAGLVDKGL 396
GY ++ PD+AL FQ M++E GV N++T +S LSAC HA +V G
Sbjct: 437 GYAEDEDPDKALAAFQTMRVE-GVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGF 495
Query: 397 EIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRL 456
E + ++N ++ + + G L+ + + + R N W A+L++
Sbjct: 496 ESDEHVKNS------------LITMYAKCGDLSSSQDLFNGLDNR-NIITWNAMLAANAH 542
Query: 457 HGN-TEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREV 504
HG+ E+ KL + K+ + G + S L+AA K + E +++
Sbjct: 543 HGHGEEVLKLVS----KMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQL 587
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 110/463 (23%), Positives = 205/463 (44%), Gaps = 61/463 (13%)
Query: 26 HDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRY 85
HD V +ST +S L + D G+ IH ++K GF + LL +Y
Sbjct: 256 HDEV-NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVE 314
Query: 86 ARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTS 145
A VF + K L ++N ++ +++ G+ ++LGL+ ++ SG+ ++ TF+ L A +
Sbjct: 315 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT 374
Query: 146 TSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEK 205
+ GRI+H ++ + + + ++ AL Y K G ++ +R V M +
Sbjct: 375 PD------FFEKGRILHGLVVVSGLFY--NQIIGNALVSMYGKIGEMSESRRVLLQMPRR 426
Query: 206 NVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAM-IEGYSKTSECATRSLEVYID 264
+V++ +LI GY + DK + F M +EG S
Sbjct: 427 DVVAWNALIGGYAE-----------DEDPDKALAAFQTMRVEGVSS-------------- 461
Query: 265 MQRLNFRPNISTFASIIGACSMVA-AFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCG 323
N T S++ AC + E G+ + + ++ F + ++LI MY+KCG
Sbjct: 462 --------NYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCG 513
Query: 324 RVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSAL 383
+ S+ +F+ + +N+ +W +M+ +G +E L+L KM+ +GV + +F L
Sbjct: 514 DLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR-SFGVSLDQFSFSEGL 572
Query: 384 SACAHAGLVDKGLEIFQSMENEYKVKPRMEH----YACVVDLLGRAGRLNQAWEFVMRMP 439
SA A ++++G ++ + VK EH + D+ + G + E V +P
Sbjct: 573 SAAAKLAVLEEGQQL-----HGLAVKLGFEHDSFIFNAAADMYSKCGEIG---EVVKMLP 624
Query: 440 ERPNSDV--WAALLSSCRLHGNTEMAKLAASELFKLNANGRPG 480
N + W L+S+ HG E E+ ++ +PG
Sbjct: 625 PSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGI--KPG 665
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 184/420 (43%), Gaps = 53/420 (12%)
Query: 76 LYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFT 135
+Y K ++ AR +FD + + ++N M+ ++ G E + R++ G K F
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 136 FSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYA 195
+ ++ A GR+ + + G VH + K+ + L+D YV
Sbjct: 61 IASLVTAC----GRSGSMFRE-GVQVHGFVAKSGL-----------LSDVYV-------- 96
Query: 196 RTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECA 255
ST+++ Y GL + +F++ D+++V + +++ GYS E
Sbjct: 97 --------------STAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGE-P 141
Query: 256 TRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSAL 315
+++Y M+ N ++ + +I +C ++ +G+Q+ Q++K+ + + ++L
Sbjct: 142 EEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSL 201
Query: 316 IDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPN 375
I M G V + +FD M +++ SW S+ Y +NG +E+ +F M+ + V N
Sbjct: 202 ISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV-N 260
Query: 376 FVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGR----AGRLNQA 431
T + LS H G I + VK + CV + L R AGR +A
Sbjct: 261 STTVSTLLSVLGHVDHQKWGRGI-----HGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 315
Query: 432 WEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAA 491
+MP + + W +L++S N + A L + ++G+ YV ++ LAA
Sbjct: 316 NLVFKQMPTK-DLISWNSLMAS---FVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAA 371
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 212 bits (539), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 137/472 (29%), Positives = 233/472 (49%), Gaps = 47/472 (9%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ +H ++ +G N I L+ +Y K + +R+V + + + A+N +IG Y +
Sbjct: 364 GRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAE 423
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDL---GRIVHVQILK 167
+++L + + V G + T +L A + P GDL G+ +H I+
Sbjct: 424 DEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC-------LLP-GDLLERGKPLHAYIVS 475
Query: 168 ADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAE 227
A + +D +VKN SLI+ Y G ++
Sbjct: 476 AGFE-----------SDEHVKN----------------------SLITMYAKCGDLSSSQ 502
Query: 228 CIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMV 287
+F +++I+ +NAM+ + L++ M+ + +F+ + A + +
Sbjct: 503 DLFNGLDNRNIITWNAMLAANAHHGH-GEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKL 561
Query: 288 AAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMI 347
A E GQQ+ +K F + +A DMYSKCG + + ++ +++ SW +I
Sbjct: 562 AVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILI 621
Query: 348 DGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYK 407
G++G+ +E F +M +E G+ P VTF+S L+AC+H GLVDKGL + + ++
Sbjct: 622 SALGRHGYFEEVCATFHEM-LEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFG 680
Query: 408 VKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAA 467
++P +EH CV+DLLGR+GRL +A F+ +MP +PN VW +LL+SC++HGN + + AA
Sbjct: 681 LEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAA 740
Query: 468 SELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
L KL YV SN A +W+ V +R+ M + I K ACSWV
Sbjct: 741 ENLSKLEPE-DDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWV 791
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 203/469 (43%), Gaps = 71/469 (15%)
Query: 49 SSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAY 108
S G+ I ++K+G + L+ + + YA +FD + ++ ++N + AY
Sbjct: 160 SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAY 219
Query: 109 LKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKA 168
+ G +EES + + ++++ T S +L + GR +H ++K
Sbjct: 220 AQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQK------WGRGIHGLVVKM 273
Query: 169 DVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAEC 228
D +C L Y GR A VF M K++IS SL++ ++N G DA
Sbjct: 274 GFD--SVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALG 331
Query: 229 IFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVA 288
+ + V N TF S + AC
Sbjct: 332 LLCSMISSGKSV--------------------------------NYVTFTSALAACFTPD 359
Query: 289 AFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMID 348
FE G+ + ++ + F + +G+AL+ MY K G + +SRRV M +++V +W ++I
Sbjct: 360 FFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIG 419
Query: 349 GYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSAC------------AHAGLVDKGL 396
GY ++ PD+AL FQ M++E GV N++T +S LSAC HA +V G
Sbjct: 420 GYAEDEDPDKALAAFQTMRVE-GVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGF 478
Query: 397 EIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRL 456
E + ++N ++ + + G L+ + + + R N W A+L++
Sbjct: 479 ESDEHVKNS------------LITMYAKCGDLSSSQDLFNGLDNR-NIITWNAMLAANAH 525
Query: 457 HGN-TEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREV 504
HG+ E+ KL + K+ + G + S L+AA K + E +++
Sbjct: 526 HGHGEEVLKLVS----KMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQL 570
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 110/463 (23%), Positives = 205/463 (44%), Gaps = 61/463 (13%)
Query: 26 HDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRY 85
HD V +ST +S L + D G+ IH ++K GF + LL +Y
Sbjct: 239 HDEV-NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVE 297
Query: 86 ARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTS 145
A VF + K L ++N ++ +++ G+ ++LGL+ ++ SG+ ++ TF+ L A +
Sbjct: 298 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT 357
Query: 146 TSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEK 205
+ GRI+H ++ + + + ++ AL Y K G ++ +R V M +
Sbjct: 358 PD------FFEKGRILHGLVVVSGLFY--NQIIGNALVSMYGKIGEMSESRRVLLQMPRR 409
Query: 206 NVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAM-IEGYSKTSECATRSLEVYID 264
+V++ +LI GY + DK + F M +EG S
Sbjct: 410 DVVAWNALIGGYAE-----------DEDPDKALAAFQTMRVEGVSS-------------- 444
Query: 265 MQRLNFRPNISTFASIIGACSMVA-AFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCG 323
N T S++ AC + E G+ + + ++ F + ++LI MY+KCG
Sbjct: 445 --------NYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCG 496
Query: 324 RVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSAL 383
+ S+ +F+ + +N+ +W +M+ +G +E L+L KM+ +GV + +F L
Sbjct: 497 DLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR-SFGVSLDQFSFSEGL 555
Query: 384 SACAHAGLVDKGLEIFQSMENEYKVKPRMEH----YACVVDLLGRAGRLNQAWEFVMRMP 439
SA A ++++G ++ + VK EH + D+ + G + E V +P
Sbjct: 556 SAAAKLAVLEEGQQL-----HGLAVKLGFEHDSFIFNAAADMYSKCGEIG---EVVKMLP 607
Query: 440 ERPNSDV--WAALLSSCRLHGNTEMAKLAASELFKLNANGRPG 480
N + W L+S+ HG E E+ ++ +PG
Sbjct: 608 PSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGI--KPG 648
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 137/290 (47%), Gaps = 15/290 (5%)
Query: 206 NVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDM 265
+V ST+++ Y GL + +F++ D+++V + +++ GYS E +++Y M
Sbjct: 76 DVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGE-PEEVIDIYKGM 134
Query: 266 QRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRV 325
+ N ++ + +I +C ++ +G+Q+ Q++K+ + + ++LI M G V
Sbjct: 135 RGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNV 194
Query: 326 VDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSA 385
+ +FD M +++ SW S+ Y +NG +E+ +F M+ + V N T + LS
Sbjct: 195 DYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV-NSTTVSTLLSV 253
Query: 386 CAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGR----AGRLNQAWEFVMRMPER 441
H G I + VK + CV + L R AGR +A +MP +
Sbjct: 254 LGHVDHQKWGRGI-----HGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK 308
Query: 442 PNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAA 491
+ W +L++S N + A L + ++G+ YV ++ LAA
Sbjct: 309 -DLISWNSLMASFV---NDGRSLDALGLLCSMISSGKSVNYVTFTSALAA 354
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 115/228 (50%), Gaps = 7/228 (3%)
Query: 236 KDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAA-FEVGQ 294
++ V +N M+ G + +E + M L +P+ AS++ AC + F G
Sbjct: 4 RNEVSWNTMMSGIVRVG-LYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGV 62
Query: 295 QVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNG 354
QV + K+ + + +A++ +Y G V SR+VF+ M +NV SWTS++ GY G
Sbjct: 63 QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG 122
Query: 355 FPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIF-QSMENEYKVKPRME 413
P+E +++++ M+ E GV N + +S+C G +I Q +++ + K +E
Sbjct: 123 EPEEVIDIYKGMRGE-GVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVE 181
Query: 414 HYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTE 461
+ ++ +LG G ++ A +M ER ++ W ++ ++ +G+ E
Sbjct: 182 N--SLISMLGSMGNVDYANYIFDQMSER-DTISWNSIAAAYAQNGHIE 226
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 212 bits (539), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 147/541 (27%), Positives = 251/541 (46%), Gaps = 64/541 (11%)
Query: 28 FVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYAR 87
F P +T L N L + S G+++H K+G ++ + L+ Y KC L A
Sbjct: 147 FSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAE 206
Query: 88 QVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTS-- 145
+F +++DK+ ++N MIGAY + G EE++ + + + ++ T +L A S
Sbjct: 207 VLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHE 266
Query: 146 --------------------------------------TSGRNVAPLGDLGRIVHVQILK 167
S + + +G L IV K
Sbjct: 267 PLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVG-LTSIVSCYAEK 325
Query: 168 ADVDV-------------EKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLI 214
D+D+ + D V + K+ I ++ + + + T ++
Sbjct: 326 GDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVV 385
Query: 215 SGYMNQ-GLFKDAECI---FQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLN- 269
+G + F D E + F++ + ++ +N++I G ++ A+ + EV+ M
Sbjct: 386 NGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGR-ASTAFEVFHQMMLTGG 444
Query: 270 FRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSR 329
P+ T AS++ CS + +G+++ ++ F + +ALIDMY+KCG V +
Sbjct: 445 LLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAE 504
Query: 330 RVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHA 389
VF + +W SMI GY +G AL + +M+ E G+ P+ +TFL LSAC H
Sbjct: 505 SVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMR-EKGLKPDEITFLGVLSACNHG 563
Query: 390 GLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAA 449
G VD+G F++M E+ + P ++HYA +V LLGRA +A + +M +P+S VW A
Sbjct: 564 GFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGA 623
Query: 450 LLSSCRLHGNTEMAKLAASELFKLN-ANGRPGAYVALSNTLAAAEKWDSVSELREVMKER 508
LLS+C +H E+ + A ++F L+ NG G YV +SN A WD V +R +MK+
Sbjct: 624 LLSACIIHRELEVGEYVARKMFMLDYKNG--GLYVLMSNLYATEAMWDDVVRVRNMMKDN 681
Query: 509 G 509
G
Sbjct: 682 G 682
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/535 (21%), Positives = 215/535 (40%), Gaps = 96/535 (17%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQ 111
+ + +H+ K+G + LL LYLK C+ A+ +FD++ ++ +N +I Y +
Sbjct: 70 EQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRN 129
Query: 112 GQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPL-GDLGRIVH---VQILK 167
G ++ L +L G FS ++T+ N+ P G G + V +
Sbjct: 130 GYECDAWKLFIVMLQQG-------FS-----PSATTLVNLLPFCGQCGFVSQGRSVHGVA 177
Query: 168 ADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAE 227
A +E D + AL Y K + A +F M +K+ +S ++I Y GL ++A
Sbjct: 178 AKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAI 237
Query: 228 CIFQKTVDK---------------------------------DIVVFNAMIEGYSKTSEC 254
+F+ +K DI V +++ YS+ C
Sbjct: 238 TVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCG-C 296
Query: 255 ATRSLEVYI---------------------DM----------QRLNFRPNISTFASIIGA 283
+ +Y DM ++L + + I+
Sbjct: 297 LVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHG 356
Query: 284 CSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSW 343
C + ++G + +K+ + + LI MYSK V +F+ + + + SW
Sbjct: 357 CKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISW 416
Query: 344 TSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIF-QSM 402
S+I G ++G A E+F +M + G++P+ +T S L+ C+ ++ G E+ ++
Sbjct: 417 NSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTL 476
Query: 403 ENEYKVKPRMEHYAC--VVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNT 460
N ++ E++ C ++D+ + G QA E V + + P + W +++S L G
Sbjct: 477 RNNFE----NENFVCTALIDMYAKCGNEVQA-ESVFKSIKAPCTATWNSMISGYSLSG-- 529
Query: 461 EMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSE----LREVMKERGIS 511
+ A S ++ G + L+A V E R ++KE GIS
Sbjct: 530 -LQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGIS 583
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 127/266 (47%), Gaps = 19/266 (7%)
Query: 233 TVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSM-VAAFE 291
T+ +D+ F+++++ E ++ + ++ D+ R + PN T + + A + +F+
Sbjct: 8 TLYRDLSYFHSLLKS-CIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFK 66
Query: 292 VG-QQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGY 350
+ +QVQ+ L K+ + + ++L+++Y K G V ++ +FD M +++ W ++I GY
Sbjct: 67 LQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGY 126
Query: 351 GKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIF-----QSMENE 405
+NG+ +A +LF M ++ G P+ T ++ L C G V +G + +E +
Sbjct: 127 SRNGYECDAWKLFIVM-LQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELD 185
Query: 406 YKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKL 465
+VK + + + L A E + R + ++ W ++ + G E A
Sbjct: 186 SQVKNAL------ISFYSKCAELGSA-EVLFREMKDKSTVSWNTMIGAYSQSGLQEEAIT 238
Query: 466 AASELFKLNANGRPGAYVALSNTLAA 491
+F+ N P V + N L+A
Sbjct: 239 VFKNMFEKNVEISP---VTIINLLSA 261
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 141/490 (28%), Positives = 246/490 (50%), Gaps = 45/490 (9%)
Query: 26 HDFVPHSTLLSNTLQYYINSDTPSS-GQTIHSHIL-KTGFVPNTNISIKLLVLYLKCNCL 83
+ F+P S L+++ L + S + H+ +L + +S L+ +YLK +
Sbjct: 142 YGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDH 201
Query: 84 RYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKAS 143
A VFD + K ++ MI + E + L R +
Sbjct: 202 AAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAM------------------- 242
Query: 144 TSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMS 203
N+ P R+ + +L A V++ L + ++G A R
Sbjct: 243 ---QRENLRP----NRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERL------ 289
Query: 204 EKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYI 263
+ + ++ Y G + +F+ + +D+V++++MI GY++T +C + + +
Sbjct: 290 ------TAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDC-SEVMNLLN 342
Query: 264 DMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCG 323
M++ N T +I+ AC+ V SQ++K F HI LG+ALIDMY+KCG
Sbjct: 343 QMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCG 402
Query: 324 RVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSAL 383
+ +R VF + +K++ SW+SMI+ YG +G EALE+F+ M I+ G + + FL+ L
Sbjct: 403 SLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGM-IKGGHEVDDMAFLAIL 461
Query: 384 SACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPN 443
SAC HAGLV++ IF + +Y + +EHYAC ++LLGR G+++ A+E + MP +P+
Sbjct: 462 SACNHAGLVEEAQTIF-TQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPS 520
Query: 444 SDVWAALLSSCRLHGNTEMA-KLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELR 502
+ +W++LLS+C HG ++A K+ A+EL K + P YV LS + + + E+R
Sbjct: 521 ARIWSSLLSACETHGRLDVAGKIIANELMKSEPDN-PANYVLLSKIHTESGNYHAAEEVR 579
Query: 503 EVMKERGISK 512
VM+ R ++K
Sbjct: 580 RVMQRRKLNK 589
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 121/468 (25%), Positives = 206/468 (44%), Gaps = 61/468 (13%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G +H LK G +T +S L+ +Y K + R+VFD++ + +Y +I + +
Sbjct: 66 GAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQ 125
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
G + E++ L++ + GF L AS + + R+ H +L D
Sbjct: 126 DGLLYEAMKLIKEMY-----FYGFIPKSELVASLLALCTRMGSSSKVARMFHALVL-VDE 179
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
+++ +L TAL D Y+K A A VFD M KN +S T++ISG C+
Sbjct: 180 RMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISG-----------CVA 228
Query: 231 QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAF 290
+ + + +F A MQR N RPN T S++ AC
Sbjct: 229 NQNYEMGVDLFRA---------------------MQRENLRPNRVTLLSVLPAC---VEL 264
Query: 291 EVGQQVQSQLMKTPF----FGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSM 346
G + ++ F +L +A + MY +CG V SR +F+ ++V W+SM
Sbjct: 265 NYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSM 324
Query: 347 IDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEY 406
I GY + G E + L +M+ E G+ N VT L+ +SAC ++ L+ F S +
Sbjct: 325 ISGYAETGDCSEVMNLLNQMRKE-GIEANSVTLLAIVSACTNSTLLS-----FASTVHSQ 378
Query: 407 KVKPR-MEHYA---CVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEM 462
+K M H ++D+ + G L+ A E + E+ + W++++++ LHG+
Sbjct: 379 ILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEK-DLVSWSSMINAYGLHGHGS- 436
Query: 463 AKLAASELFK-LNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERG 509
A E+FK + G +A L+A V E + + + G
Sbjct: 437 ---EALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAG 481
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 145/339 (42%), Gaps = 42/339 (12%)
Query: 23 LQNHDFVPHSTLLSNTLQYYINSDTPSS-GQTIHSHILKTGFVPNTNISIKLLVLYLKCN 81
+Q + P+ L + L + + SS + IH + G + ++ + +Y +C
Sbjct: 242 MQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCG 301
Query: 82 CLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILK 141
+ +R +F+ + + + ++ MI Y + G E + L+ ++ G + + T I+
Sbjct: 302 NVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVS 361
Query: 142 ASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDV 201
A T+++ L VH QILK +L AL D Y K G ++ AR VF
Sbjct: 362 ACTNST------LLSFASTVHSQILKC--GFMSHILLGNALIDMYAKCGSLSAAREVFYE 413
Query: 202 MSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEV 261
++EK+++S +S+I+ Y G +A + +F MI+G + + A
Sbjct: 414 LTEKDLVSWSSMINAYGLHGHGSEA-----------LEIFKGMIKGGHEVDDMA------ 456
Query: 262 YIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSK 321
F +I+ AC+ E Q + +Q K ++ + I++ +
Sbjct: 457 ---------------FLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGR 501
Query: 322 CGRVVDSRRVFDHMHQK-NVFSWTSMIDGYGKNGFPDEA 359
G++ D+ V +M K + W+S++ +G D A
Sbjct: 502 FGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVA 540
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 104/237 (43%), Gaps = 16/237 (6%)
Query: 275 STFASIIGACSMV-AAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFD 333
+ S+I AC+ F +G Q+ +K + ++LI MY+K R R+VFD
Sbjct: 47 AILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFD 106
Query: 334 HMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVD 393
M ++ S+ S+I+ ++G EA++L ++M YG +P S L+ C G
Sbjct: 107 EMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYF-YGFIPKSELVASLLALCTRMGSSS 165
Query: 394 KGLEIFQSMENEYKVKPRMEH----YACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAA 449
K +F ++ V RM+ +VD+ + A+ +M E N W A
Sbjct: 166 KVARMFHAL---VLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQM-EVKNEVSWTA 221
Query: 450 LLSSCRLHGNTEMAKLAASELFKL--NANGRPGAYVALSNTLAAAEKWDSVSELREV 504
++S C + N EM +LF+ N RP LS A E S ++E+
Sbjct: 222 MISGCVANQNYEM----GVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEI 274
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 142/474 (29%), Positives = 242/474 (51%), Gaps = 52/474 (10%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ IH + K GF + + L+ Y C R A +VF ++ + + ++ +I + +
Sbjct: 125 GKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTR 184
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILK--A 168
G +E+L ++ V L + ++ +SGR V L LG+ +H ILK +
Sbjct: 185 TGLYKEALDTFSKMDVE-PNLATYVCVLV------SSGR-VGCL-SLGKGIHGLILKRAS 235
Query: 169 DVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAEC 228
+ +E + AL D YVK +++ DA
Sbjct: 236 LISLETGN----ALIDMYVKCEQLS-------------------------------DAMR 260
Query: 229 IFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLN-FRPNISTFASIIGACSMV 287
+F + KD V +N+MI G E + +++++ MQ + +P+ S++ AC+ +
Sbjct: 261 VFGELEKKDKVSWNSMISGLVHC-ERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASL 319
Query: 288 AAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMI 347
A + G+ V ++ +G+A++DMY+KCG + + +F+ + KNVF+W +++
Sbjct: 320 GAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALL 379
Query: 348 DGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMEN-EY 406
G +G E+L F++M ++ G PN VTFL+AL+AC H GLVD+G F M++ EY
Sbjct: 380 GGLAIHGHGLESLRYFEEM-VKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREY 438
Query: 407 KVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGN-TEMAKL 465
+ P++EHY C++DLL RAG L++A E V MP +P+ + A+LS+C+ G E+ K
Sbjct: 439 NLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKE 498
Query: 466 AASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
+ G YV LSN AA +WD V+ +R +MK +GISK S++
Sbjct: 499 ILDSFLDIEFED-SGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYI 551
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 144/361 (39%), Gaps = 87/361 (24%)
Query: 49 SSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAY 108
S G+ IH ILK + + L+ +Y+KC L A +VF +L K ++N MI
Sbjct: 221 SLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGL 280
Query: 109 LKQGQVEESLGLVRRLLV-SGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILK 167
+ + +E++ L + SG K DG + +L A S D GR VH IL
Sbjct: 281 VHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAV------DHGRWVHEYILT 334
Query: 168 ADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAE 227
A ++ D + TA+ D Y K G I A +F+ + KNV + +L+ G
Sbjct: 335 A--GIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGL---------- 382
Query: 228 CIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMV 287
I G+ SL + +M +L F+PN+ TF + + AC
Sbjct: 383 ----------------AIHGH------GLESLRYFEEMVKLGFKPNLVTFLAALNACCHT 420
Query: 288 AAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQK--NVFS--- 342
G V + RR F M + N+F
Sbjct: 421 -----------------------------------GLVDEGRRYFHKMKSREYNLFPKLE 445
Query: 343 -WTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAG-LVDKGLEIFQ 400
+ MID + G DEALEL + M ++ P+ + LSAC + G L++ EI
Sbjct: 446 HYGCMIDLLCRAGLLDEALELVKAMPVK----PDVRICGAILSACKNRGTLMELPKEILD 501
Query: 401 S 401
S
Sbjct: 502 S 502
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 113/249 (45%), Gaps = 11/249 (4%)
Query: 269 NFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDS 328
F P++ TF + AC + G+Q+ + K F+ I + ++L+ Y CG ++
Sbjct: 101 GFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNA 160
Query: 329 RRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAH 388
+VF M ++V SWT +I G+ + G EAL+ F KM +E PN T++ L +
Sbjct: 161 CKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVE----PNLATYVCVLVSSGR 216
Query: 389 AGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWA 448
G + G I + + +E ++D+ + +L+ A + E+ + W
Sbjct: 217 VGCLSLGKGIHGLILKRASL-ISLETGNALIDMYVKCEQLSDAMRVFGEL-EKKDKVSWN 274
Query: 449 ALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELR---EVM 505
+++S +H + L + ++ +P ++ L++ L+A +V R E +
Sbjct: 275 SMISGL-VHCERSKEAIDLFSLMQTSSGIKPDGHI-LTSVLSACASLGAVDHGRWVHEYI 332
Query: 506 KERGISKDT 514
GI DT
Sbjct: 333 LTAGIKWDT 341
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%)
Query: 30 PHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQV 89
P +L++ L + G+ +H +IL G +T+I ++ +Y KC + A ++
Sbjct: 304 PDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEI 363
Query: 90 FDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTST 146
F+ +R K + +N ++G G ESL ++ G K + TF L A T
Sbjct: 364 FNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHT 420
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 135/529 (25%), Positives = 245/529 (46%), Gaps = 49/529 (9%)
Query: 30 PHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQV 89
P +S L N G+ H+ + G + + LL Y K + YA V
Sbjct: 272 PTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMV 331
Query: 90 FDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGR 149
FD + +K + +N +I Y++QG VE+++ + + + + K D T + ++ A+ T
Sbjct: 332 FDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENL 391
Query: 150 NVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVIS 209
LG+ V ++ E D VL + + D Y K G I A+ VFD EK++I
Sbjct: 392 K------LGKEVQCYCIRHSF--ESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLIL 443
Query: 210 STSLISGYMNQGLFKDAECIFQ----KTVDKDIVVFNAMIEGYSKTSE------------ 253
+L++ Y GL +A +F + V +++ +N +I + +
Sbjct: 444 WNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQ 503
Query: 254 ----------------------CATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFE 291
C+ ++ MQ RPN + + AC+ +A+
Sbjct: 504 SSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLH 563
Query: 292 VGQQVQSQLMKT-PFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGY 350
+G+ + +++ + + ++L+DMY+KCG + + +VF + +MI Y
Sbjct: 564 IGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAY 623
Query: 351 GKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKP 410
G EA+ L++ ++ G+ P+ +T + LSAC HAG +++ +EIF + ++ +KP
Sbjct: 624 ALYGNLKEAIALYRSLE-GVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKP 682
Query: 411 RMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASEL 470
+EHY +VDLL AG +A + MP +P++ + +L++SC TE+ + +L
Sbjct: 683 CLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKL 742
Query: 471 FKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
+ G YV +SN A WD V ++RE+MK +G+ K CSW+
Sbjct: 743 LESEPE-NSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWI 790
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 203/407 (49%), Gaps = 45/407 (11%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ +H +++K+G ++ L +Y KC L A +VFD++ D+ A+N ++ Y++
Sbjct: 192 GRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQ 251
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
G+ EE++ L + G + T S L AS + G IV+
Sbjct: 252 NGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVN-------- 303
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
+E D++L T+L + Y K G I YA VFD M EK+V++ +ISGY+ QGL +DA I+
Sbjct: 304 GMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDA--IY 361
Query: 231 QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAF 290
C LE + + T A+++ A +
Sbjct: 362 M----------------------CQLMRLE--------KLKYDCVTLATLMSAAARTENL 391
Query: 291 EVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGY 350
++G++VQ ++ F I L S ++DMY+KCG +VD+++VFD +K++ W +++ Y
Sbjct: 392 KLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAY 451
Query: 351 GKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKP 410
++G EAL LF MQ+E GV PN +T+ + + G VD+ ++F M++ + P
Sbjct: 452 AESGLSGEALRLFYGMQLE-GVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSS-GIIP 509
Query: 411 RMEHYACVVDLLGRAGRLNQAWEFVMRMPE---RPNSDVWAALLSSC 454
+ + +++ + + G +A F+ +M E RPN+ LS+C
Sbjct: 510 NLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSAC 556
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 160/352 (45%), Gaps = 43/352 (12%)
Query: 49 SSGQTIHSHILKTG--FVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIG 106
S+G+ IH+ ILK G + N I KL++ Y KC+ L A +F LR + + ++ +IG
Sbjct: 87 STGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIG 146
Query: 107 AYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQIL 166
+ G E +L +L + D F + KA + GR VH ++
Sbjct: 147 VKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALK------WSRFGRGVHGYVV 200
Query: 167 KADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDA 226
K+ +E + ++L D Y K G + A VFD + ++N ++ +L+ GY+ G K+
Sbjct: 201 KS--GLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNG--KNE 256
Query: 227 ECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSM 286
E I ++ DM++ P T ++ + A +
Sbjct: 257 EAI------------------------------RLFSDMRKQGVEPTRVTVSTCLSASAN 286
Query: 287 VAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSM 346
+ E G+Q + + LG++L++ Y K G + + VFD M +K+V +W +
Sbjct: 287 MGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLI 346
Query: 347 IDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEI 398
I GY + G ++A+ + Q M++E + + VT + +SA A + G E+
Sbjct: 347 ISGYVQQGLVEDAIYMCQLMRLE-KLKYDCVTLATLMSAAARTENLKLGKEV 397
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 151/332 (45%), Gaps = 44/332 (13%)
Query: 99 SAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLG 158
++Y + + + K G+++E+L LV + ++ + IL+ R+++ G
Sbjct: 36 TSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYE--RDLST----G 89
Query: 159 RIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYM 218
+ +H +ILK +++ + T L Y K + A +F + +NV S ++I
Sbjct: 90 KQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKC 149
Query: 219 NQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFA 278
GL + A F + ++ +I N ++ PN+
Sbjct: 150 RIGLCEGALMGFVEMLENEIFPDNFVV--------------------------PNVCK-- 181
Query: 279 SIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQK 338
AC + G+ V ++K+ + + S+L DMY KCG + D+ +VFD + +
Sbjct: 182 ----ACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDR 237
Query: 339 NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKG--- 395
N +W +++ GY +NG +EA+ LF M+ + GV P VT + LSA A+ G V++G
Sbjct: 238 NAVAWNALMVGYVQNGKNEEAIRLFSDMR-KQGVEPTRVTVSTCLSASANMGGVEEGKQS 296
Query: 396 --LEIFQSMENEYKVKPRMEHYACVVDLLGRA 425
+ I ME + + + ++ C V L+ A
Sbjct: 297 HAIAIVNGMELDNILGTSLLNFYCKVGLIEYA 328
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 209 bits (531), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 139/463 (30%), Positives = 237/463 (51%), Gaps = 46/463 (9%)
Query: 51 GQTIHSHILKTGFVPN-TNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYL 109
G+++H ++ PN ++S+ L+ LY +C L V + D+ + A+N +I Y
Sbjct: 322 GKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYA 381
Query: 110 KQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKAD 169
+G V ++LGL R+++ K D FT + +S S A L LG+ +H +++ D
Sbjct: 382 HRGMVIQALGLFRQMVTQRIKPDAFTLA------SSISACENAGLVPLGKQIHGHVIRTD 435
Query: 170 VDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECI 229
V D+ + +L D Y K+G + A TVF+ + ++V++ S++ G+ G +A
Sbjct: 436 V---SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEA--- 489
Query: 230 FQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAA 289
I +F+ M Y + +E TF ++I ACS + +
Sbjct: 490 --------ISLFDYMYHSYLEMNEV---------------------TFLAVIQACSSIGS 520
Query: 290 FEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDG 349
E G+ V +L+ + + +ALIDMY+KCG + + VF M +++ SW+SMI+
Sbjct: 521 LEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINA 579
Query: 350 YGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVK 409
YG +G A+ F +M +E G PN V F++ LSAC H+G V++G F M++ + V
Sbjct: 580 YGMHGRIGSAISTFNQM-VESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKS-FGVS 637
Query: 410 PRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASE 469
P EH+AC +DLL R+G L +A+ + MP ++ VW +L++ CR+H ++ K ++
Sbjct: 638 PNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKND 697
Query: 470 LFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISK 512
L + + G Y LSN A +W+ LR MK + K
Sbjct: 698 LSDIVTDD-TGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKK 739
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 204/444 (45%), Gaps = 51/444 (11%)
Query: 54 IHSHILKTGFVPNTNISI-KLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQG 112
+H+H+L TG + + + KL+ Y +R VF+ Y +I +
Sbjct: 20 LHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCH 79
Query: 113 QVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDV 172
++ ++ L RL+ ++ F F +L+A + +G VH +I+K VD
Sbjct: 80 LLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHL-----SVGGKVHGRIIKGGVD- 133
Query: 173 EKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQK 232
D V+ T+L Y + G ++ A VFD M +++++ ++L+S + G A +F+
Sbjct: 134 -DDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKC 192
Query: 233 TVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEV 292
VD + P+ T S++ C+ + +
Sbjct: 193 MVDDGV--------------------------------EPDAVTMISVVEGCAELGCLRI 220
Query: 293 GQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGK 352
+ V Q+ + F L ++L+ MYSKCG ++ S R+F+ + +KN SWT+MI Y +
Sbjct: 221 ARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNR 280
Query: 353 NGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRM 412
F ++AL F +M I+ G+ PN VT S LS+C GL+ +G + ++ P
Sbjct: 281 GEFSEKALRSFSEM-IKSGIEPNLVTLYSVLSSCGLIGLIREGKSV-HGFAVRRELDPNY 338
Query: 413 EHYA-CVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELF 471
E + +V+L G+L+ E V+R+ N W +L+S L+ + M + A LF
Sbjct: 339 ESLSLALVELYAECGKLSDC-ETVLRVVSDRNIVAWNSLIS---LYAHRGMV-IQALGLF 393
Query: 472 KLNANGR--PGAYVALSNTLAAAE 493
+ R P A+ L+++++A E
Sbjct: 394 RQMVTQRIKPDAF-TLASSISACE 416
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 173/355 (48%), Gaps = 50/355 (14%)
Query: 49 SSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAY 108
S G +H I+K G + I LL +Y + L A +VFD + + L A++ ++ +
Sbjct: 118 SVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSC 177
Query: 109 LKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDL--GRIVHVQIL 166
L+ G+V ++L + + ++ G + D T +++ A LG L R VH QI
Sbjct: 178 LENGEVVKALRMFKCMVDDGVEPDAVTMISVVEG--------CAELGCLRIARSVHGQIT 229
Query: 167 KADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDA 226
+ D+ D+ LC +L Y K G + + +F+ +++KN +S T++IS Y N+G F
Sbjct: 230 RKMFDL--DETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSY-NRGEF--- 283
Query: 227 ECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSM 286
SE A RS + +M + PN+ T S++ +C +
Sbjct: 284 -------------------------SEKALRS---FSEMIKSGIEPNLVTLYSVLSSCGL 315
Query: 287 VAAFEVGQQVQSQLMK---TPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSW 343
+ G+ V ++ P + + L AL+++Y++CG++ D V + +N+ +W
Sbjct: 316 IGLIREGKSVHGFAVRRELDPNYESLSL--ALVELYAECGKLSDCETVLRVVSDRNIVAW 373
Query: 344 TSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEI 398
S+I Y G +AL LF++M + + P+ T S++SAC +AGLV G +I
Sbjct: 374 NSLISLYAHRGMVIQALGLFRQM-VTQRIKPDAFTLASSISACENAGLVPLGKQI 427
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 146/327 (44%), Gaps = 55/327 (16%)
Query: 30 PHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQV 89
P + L++++ N+ G+ IH H+++T V + + L+ +Y K + A V
Sbjct: 403 PDAFTLASSISACENAGLVPLGKQIHGHVIRTD-VSDEFVQNSLIDMYSKSGSVDSASTV 461
Query: 90 FDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGR 149
F+ ++ +++ +N M+ + + G E++ L + S +++ TF +++A +S
Sbjct: 462 FNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSS---- 517
Query: 150 NVAPLGDL--GRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNV 207
+G L G+ VH +++ + + KD TAL D Y K G + A TVF MS +++
Sbjct: 518 ----IGSLEKGKWVHHKLIISGL---KDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSI 570
Query: 208 ISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQR 267
+S +S+I+ Y G A I FN M+E +K
Sbjct: 571 VSWSSMINAYGMHGRIGSA-----------ISTFNQMVESGTK----------------- 602
Query: 268 LNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMK----TPFFGHIKLGSALIDMYSKCG 323
PN F +++ AC + E G + LMK +P H + ID+ S+ G
Sbjct: 603 ----PNEVVFMNVLSACGHSGSVEEG-KYYFNLMKSFGVSPNSEHF---ACFIDLLSRSG 654
Query: 324 RVVDSRRVFDHM-HQKNVFSWTSMIDG 349
+ ++ R M + W S+++G
Sbjct: 655 DLKEAYRTIKEMPFLADASVWGSLVNG 681
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 208 bits (530), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 137/492 (27%), Positives = 234/492 (47%), Gaps = 54/492 (10%)
Query: 46 DTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCL----RYARQVFDDLRDKTLSAY 101
+T ++ HS + G NT KLL +L L YA +FD + Y
Sbjct: 22 NTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVY 81
Query: 102 NYMIGAYLKQGQVEESLGLVRRLLVSGEKLDG-----FTFSMILKASTSTSGRNVAPLGD 156
+ MI + Q LGL LL+ E+ + TF ++ A A
Sbjct: 82 DTMIRICSRSSQ--PHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLK------ACFFS 133
Query: 157 LGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISG 216
+G+ +H ++K V L+D +V+ G ++
Sbjct: 134 VGKQIHCWVVKNGV----------FLSDGHVQTG----------------------VLRI 161
Query: 217 YMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNIST 276
Y+ L DA +F + D+V ++ ++ GY + + LEV+ +M P+ +
Sbjct: 162 YVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCG-LGSEGLEVFKEMLVRGIEPDEFS 220
Query: 277 FASIIGACSMVAAFEVGQQVQSQLMKTPFF-GHIKLGSALIDMYSKCGRVVDSRRVFDHM 335
+ + AC+ V A G+ + + K + + +G+AL+DMY+KCG + + VF+ +
Sbjct: 221 VTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKL 280
Query: 336 HQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKG 395
++NVFSW ++I GY G+ +A +++ E G+ P+ V L L+ACAH G +++G
Sbjct: 281 TRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEG 340
Query: 396 LEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCR 455
+ ++ME Y + P+ EHY+C+VDL+ RAGRL+ A + + +MP +P + VW ALL+ CR
Sbjct: 341 RTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCR 400
Query: 456 LHGNTEMAKLAASELFKL---NANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISK 512
H N E+ +LA L L N A V LSN + ++ ++R ++++RGI K
Sbjct: 401 THKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRK 460
Query: 513 DTACSWVGADSV 524
S + D +
Sbjct: 461 TPGWSLLEVDGI 472
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 147/454 (32%), Positives = 233/454 (51%), Gaps = 45/454 (9%)
Query: 66 NTNISIKLLVLYLKCNCL-RYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRL 124
N +S KL++ Y K N L + VF + + + ++N +IG + + G +S+ L R+
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 124
Query: 125 L-VSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALT 183
S + D FT +IL+A +++ A GDL +HV LK + + +AL
Sbjct: 125 WRESCVRPDDFTLPLILRACSAS---REAKSGDL---IHVLCLK--LGFSSSLFVSSALV 176
Query: 184 DSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNA 243
YV G++ +AR +FD M + D V++ A
Sbjct: 177 IMYVDMGKLLHARKLFDDMPVR-------------------------------DSVLYTA 205
Query: 244 MIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKT 303
M GY + E A L ++ +M F + S++ AC + A + G+ V ++
Sbjct: 206 MFGGYVQQGE-AMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRR 264
Query: 304 PFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELF 363
+ LG+A+ DMY KC + + VF +M +++V SW+S+I GYG +G + +LF
Sbjct: 265 CSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLF 324
Query: 364 QKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLG 423
+M E G+ PN VTFL LSACAH GLV+K F+ M+ EY + P ++HYA V D +
Sbjct: 325 DEMLKE-GIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQ-EYNIVPELKHYASVADCMS 382
Query: 424 RAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYV 483
RAG L +A +F+ MP +P+ V A+LS C+++GN E+ + A EL +L + YV
Sbjct: 383 RAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPR-KASYYV 441
Query: 484 ALSNTLAAAEKWDSVSELREVMKERGISKDTACS 517
L+ +AA ++D LR+ MKE+ ISK CS
Sbjct: 442 TLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCS 475
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 167/407 (41%), Gaps = 87/407 (21%)
Query: 45 SDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDL--RDKTLSAYN 102
S SG IH LK GF + +S L+++Y+ L +AR++FDD+ RD L Y
Sbjct: 147 SREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVL--YT 204
Query: 103 YMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDL--GRI 160
M G Y++QG+ L + R + SG LD +L A LG L G+
Sbjct: 205 AMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMA--------CGQLGALKHGKS 256
Query: 161 VHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQ 220
VH ++ + + L A+TD YVK + YA TVF MS ++VIS +SLI GY
Sbjct: 257 VHGWCIRRCSCLGLN--LGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGY--- 311
Query: 221 GLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASI 280
+D D+V+ S +++ +M + PN TF +
Sbjct: 312 ------------GLDGDVVM-----------------SFKLFDEMLKEGIEPNAVTFLGV 342
Query: 281 IGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNV 340
+ AC+ E + + +K +++ D S+ G + ++ + + M K
Sbjct: 343 LSACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVK-- 400
Query: 341 FSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQ 400
PDEA+ G V LS C G V+ G + +
Sbjct: 401 ---------------PDEAV---------MGAV---------LSGCKVYGNVEVGERVAR 427
Query: 401 SMENEYKVKPR-MEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDV 446
+ ++KPR +Y + L AGR ++A M E+ S V
Sbjct: 428 EL---IQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKV 471
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 142/462 (30%), Positives = 231/462 (50%), Gaps = 66/462 (14%)
Query: 86 ARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLL------------------VS 127
A ++F + K +A+N M+ YL+ G+V+++L L +++ S
Sbjct: 147 AERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERS 206
Query: 128 GEKLDGFTFSMILKASTSTSGRNV---------APLGDLGRIVHVQILKADVDVEKDDVL 178
GE LD F +L+ ++ R AP +G VH I+K
Sbjct: 207 GEALD--LFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGF-------- 256
Query: 179 CTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDI 238
L + YV S SLI+ Y N D+ +F + V + +
Sbjct: 257 ---LYEEYV----------------------SASLITFYANCKRIGDSRKVFDEKVHEQV 291
Query: 239 VVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQS 298
V+ A++ GYS + +L ++ M R + PN STFAS + +CS + + G+++
Sbjct: 292 AVWTALLSGYSLNKK-HEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHG 350
Query: 299 QLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDE 358
+K +G++L+ MYS G V D+ VF + +K++ SW S+I G ++G
Sbjct: 351 VAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKW 410
Query: 359 ALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYK-VKPRMEHYAC 417
A +F +M I P+ +TF LSAC+H G ++KG ++F M + + +++HY C
Sbjct: 411 AFVIFGQM-IRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTC 469
Query: 418 VVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANG 477
+VD+LGR G+L +A E + RM +PN VW ALLS+CR+H + + + AA+ +F L++
Sbjct: 470 MVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKS 529
Query: 478 RPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
AYV LSN A+A +W +VS+LR MK+ GI K SWV
Sbjct: 530 -SAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWV 570
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 189/393 (48%), Gaps = 28/393 (7%)
Query: 86 ARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTS 145
AR+VF+ + +S Y MI Y + ++ ++L L D ++ ++
Sbjct: 54 AREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNL----------FDEMPVRDVVSWNSM 103
Query: 146 TSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEK 205
SG GD+ V + D E+ V TA+ + ++G++ A +F M K
Sbjct: 104 ISG--CVECGDMNTAVKL----FDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVK 157
Query: 206 NVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDM 265
+ + S++ GY+ G DA +F++ K+++ + MI G + +E + +L+++ +M
Sbjct: 158 DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQ-NERSGEALDLFKNM 216
Query: 266 QRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRV 325
R + F +I AC+ AF +G QV ++K F + ++LI Y+ C R+
Sbjct: 217 LRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRI 276
Query: 326 VDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSA 385
DSR+VFD + V WT+++ GY N ++AL +F M + ++PN TF S L++
Sbjct: 277 GDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGM-LRNSILPNQSTFASGLNS 335
Query: 386 CAHAGLVDKGLEIFQSMENEYKVKPRMEHYACV----VDLLGRAGRLNQAWEFVMRMPER 441
C+ G +D G E+ + VK +E A V V + +G +N A +++ ++
Sbjct: 336 CSALGTLDWGKEM-----HGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKK 390
Query: 442 PNSDVWAALLSSCRLHGNTEMAKLAASELFKLN 474
W +++ C HG + A + ++ +LN
Sbjct: 391 SIVS-WNSIIVGCAQHGRGKWAFVIFGQMIRLN 422
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 147/348 (42%), Gaps = 79/348 (22%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G +H I+K GF+ +S L+ Y C + +R+VFD+ + ++ + ++ Y
Sbjct: 244 GIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSL 303
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRN-VAPLG--DLGRIVHVQILK 167
+ E++L + +L + S++ ST SG N + LG D G+ +H +K
Sbjct: 304 NKKHEDALSIFSGMLRN---------SILPNQSTFASGLNSCSALGTLDWGKEMHGVAVK 354
Query: 168 ADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAE 227
++ TD++V N SL+ Y + G DA
Sbjct: 355 LGLE-----------TDAFVGN----------------------SLVVMYSDSGNVNDAV 381
Query: 228 CIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMV 287
+F K K IV +N++I G ++ + ++ M RLN P+ TF ++ ACS
Sbjct: 382 SVFIKIFKKSIVSWNSIIVGCAQHGR-GKWAFVIFGQMIRLNKEPDEITFTGLLSACSHC 440
Query: 288 AAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMI 347
E G+++ F ++ G ID + + +T M+
Sbjct: 441 GFLEKGRKL---------FYYMSSGINHID--------------------RKIQHYTCMV 471
Query: 348 DGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKG 395
D G+ G EA EL ++M ++ PN + +L+ LSAC VD+G
Sbjct: 472 DILGRCGKLKEAEELIERMVVK----PNEMVWLALLSACRMHSDVDRG 515
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 146/328 (44%), Gaps = 20/328 (6%)
Query: 191 RIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSK 250
RI AR VF+ + +V T +I+GY DA +F + +D+V +N+MI G +
Sbjct: 50 RIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVE 109
Query: 251 TSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQ--QVQSQLMKTPFFGH 308
+ T +++++ +M ++ ++ +++ C F G+ Q + + P
Sbjct: 110 CGDMNT-AVKLFDEMP----ERSVVSWTAMVNGC-----FRSGKVDQAERLFYQMP-VKD 158
Query: 309 IKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQI 368
++++ Y + G+V D+ ++F M KNV SWT+MI G +N EAL+LF+ M +
Sbjct: 159 TAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNM-L 217
Query: 369 EYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHY--ACVVDLLGRAG 426
+ F ++ACA+A G+++ + K+ E Y A ++
Sbjct: 218 RCCIKSTSRPFTCVITACANAPAFHMGIQVHGLI---IKLGFLYEEYVSASLITFYANCK 274
Query: 427 RLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALS 486
R+ + + V VW ALLS L+ E A S + + + + +
Sbjct: 275 RIGDSRK-VFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGL 333
Query: 487 NTLAAAEKWDSVSELREVMKERGISKDT 514
N+ +A D E+ V + G+ D
Sbjct: 334 NSCSALGTLDWGKEMHGVAVKLGLETDA 361
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 150/530 (28%), Positives = 259/530 (48%), Gaps = 66/530 (12%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQ 111
Q +HS + K+ + + +L Y + L AR++FD ++++ +N +I AY K
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 112 GQVEESLGLVRRLLVSGEKLDGFTFSMILKA---STSTSG----RNVAPLGDLG--RIVH 162
Q L L ++L S + D FT++ + + S T G +A + LG +I
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICG 144
Query: 163 VQILKA----DVDVEKDDVLCT----------ALTDSYVKNGRIAYARTVFDVMSEK--- 205
I+KA + VE + C+ + Y G +F++M +
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQ 204
Query: 206 -NVISSTSLISGYMNQGL-----------------------------FKDAECI------ 229
N + +L SG ++ L + CI
Sbjct: 205 PNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSV 264
Query: 230 FQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAA 289
F + D+V +++I GYS+ +L ++ +++ +P+ A ++G+C+ ++
Sbjct: 265 FNSISEPDLVACSSLITGYSRCGN-HKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSD 323
Query: 290 FEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDG 349
G++V S +++ IK+ SALIDMYSKCG + + +F + +KN+ S+ S+I G
Sbjct: 324 SVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILG 383
Query: 350 YGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVK 409
G +GF A E F ++ +E G++P+ +TF + L C H+GL++KG EIF+ M++E+ ++
Sbjct: 384 LGLHGFASTAFEKFTEI-LEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIE 442
Query: 410 PRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASE 469
P+ EHY +V L+G AG+L +A+EFVM + + +S + ALLS C +H NT +A++ A
Sbjct: 443 PQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAEN 502
Query: 470 LFKLNANGRPGAY-VALSNTLAAAEKWDSVSELREVMKERGISKDTACSW 518
+ K N R Y V LSN A +WD V LR+ + E K SW
Sbjct: 503 IHK-NGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGISW 551
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 206 bits (523), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 125/433 (28%), Positives = 224/433 (51%), Gaps = 23/433 (5%)
Query: 100 AYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGR 159
++N +I Y + G EE+L + + +G K D +F +L +S + G+
Sbjct: 227 SWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKI------GK 280
Query: 160 IVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMN 219
VH ++LK K + + + D Y K G + YA + + N+ S++S+I GY +
Sbjct: 281 EVHARVLKNGSYSNK--FVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSS 338
Query: 220 QGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRL-----NFRPNI 274
QG +A+ +F +K++VV+ AM GY R + +++ R P+
Sbjct: 339 QGKMVEAKRLFDSLSEKNLVVWTAMFLGY-----LNLRQPDSVLELARAFIANETNTPDS 393
Query: 275 STFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDH 334
S++GACS+ A E G+++ ++T KL +A +DMYSKCG V + R+FD
Sbjct: 394 LVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDS 453
Query: 335 MHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDK 394
+++ + +MI G +G ++ + F+ M E G P+ +TF++ LSAC H GLV +
Sbjct: 454 SFERDTVMYNAMIAGCAHHGHEAKSFQHFEDM-TEGGFKPDEITFMALLSACRHRGLVLE 512
Query: 395 GLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPE-RPNSDVWAALLSS 453
G + F+SM Y + P HY C++DL G+A RL++A E + + + ++ + A L++
Sbjct: 513 GEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNA 572
Query: 454 CRLHGNTEMAKLAASELFKLNANGRPGA-YVALSNTLAAAEKWDSVSELREVMKERGISK 512
C + NTE+ K +L + G G+ Y+ ++N A++ +WD + +R M+ + +
Sbjct: 573 CSWNKNTELVKEVEEKLLVI--EGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEI 630
Query: 513 DTACSWVGADSVY 525
+ CSW D +
Sbjct: 631 FSGCSWANIDKQF 643
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 126/581 (21%), Positives = 229/581 (39%), Gaps = 133/581 (22%)
Query: 55 HSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQV 114
H +K+G S +L+ LY K LR AR VFD++ ++ + ++N +I AY+K V
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 115 EESLGLVRRLLVSGE-KLDGFTFSMILKASTSTSG---RNVAPLGDLGRIVHVQILKADV 170
+E+ R L S + D T++ +L T G + G++ R K
Sbjct: 71 KEA----RELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHR-------KEKD 119
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVM----SEKNVISSTSLISGYMNQGLFKDA 226
D+ DD T + K + Y + V+ ++ + +SLI Y G FK+
Sbjct: 120 DIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEV 179
Query: 227 ECIFQKT----------------------VDKDIVVF------------NAMIEGYSKTS 252
IF + +DK + VF N +I GY++
Sbjct: 180 CNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNG 239
Query: 253 ECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLG 312
+L++ + M+ + + +F +++ S + + ++G++V ++++K + + +
Sbjct: 240 -YEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVS 298
Query: 313 SALIDMYSKC-------------------------------GRVVDSRRVFDHMHQKNVF 341
S ++D+Y KC G++V+++R+FD + +KN+
Sbjct: 299 SGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLV 358
Query: 342 SWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIF-Q 400
WT+M GY PD LEL + P+ + +S L AC+ ++ G EI
Sbjct: 359 VWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGH 418
Query: 401 SMENEYKVKPRMEHYACVVDLLGRAGRLNQA----------------------------- 431
S+ + ++ VD+ + G + A
Sbjct: 419 SLRTGILMDKKL--VTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEA 476
Query: 432 --WEFVMRMPE---RPNSDVWAALLSSCRLHGNT-EMAKLAASELFKLNANGRPGAYVAL 485
++ M E +P+ + ALLS+CR G E K S + N + G Y +
Sbjct: 477 KSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCM 536
Query: 486 SNTLAAAEKWDSVSELREVMKERGISKD--------TACSW 518
+ A + D EL E + + + KD ACSW
Sbjct: 537 IDLYGKAYRLDKAIELMEGIDQ--VEKDAVILGAFLNACSW 575
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 144/490 (29%), Positives = 248/490 (50%), Gaps = 59/490 (12%)
Query: 52 QTIHSHILKTGFVPNTNISI----KLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGA 107
+ +H+ L+T + P ++ K+L L + + YA +VFD + + + +N +I A
Sbjct: 65 KQLHAFTLRTTY-PEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRA 123
Query: 108 YLKQ-GQVEESLGLVRRLLVSGEK-LDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQI 165
+ EE+ L R++L GE D TF +LKA G + G+ VH QI
Sbjct: 124 CAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSE------GKQVHCQI 177
Query: 166 LKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKD 225
+K D YV NG LI Y + G
Sbjct: 178 VKHGFG-----------GDVYVNNG----------------------LIHLYGSCGCLDL 204
Query: 226 AECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACS 285
A +F + ++ +V +N+MI+ + E + +L+++ +MQR +F P+ T S++ AC+
Sbjct: 205 ARKVFDEMPERSLVSWNSMIDALVRFGEYDS-ALQLFREMQR-SFEPDGYTMQSVLSACA 262
Query: 286 MVAAFEVGQQVQSQLMK---TPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFS 342
+ + +G + L++ + + ++LI+MY KCG + + +VF M ++++ S
Sbjct: 263 GLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLAS 322
Query: 343 WTSMIDGYGKNGFPDEALELFQKM-QIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQS 401
W +MI G+ +G +EA+ F +M V PN VTF+ L AC H G V+KG + F
Sbjct: 323 WNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDM 382
Query: 402 MENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHG-NT 460
M +Y ++P +EHY C+VDL+ RAG + +A + VM MP +P++ +W +LL +C G +
Sbjct: 383 MVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASV 442
Query: 461 EMAKLAASELFKL-----NANGR-PGAYVALSNTLAAAEKWDSVSELREVMKERGISKDT 514
E+++ A + ++NG GAYV LS A+A +W+ V +R++M E GI K+
Sbjct: 443 ELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEP 502
Query: 515 ACSWVGADSV 524
CS + + +
Sbjct: 503 GCSSIEINGI 512
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 144/314 (45%), Gaps = 50/314 (15%)
Query: 49 SSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAY 108
S G+ +H I+K GF + ++ L+ LY C CL AR+VFD++ +++L ++N MI A
Sbjct: 168 SEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDAL 227
Query: 109 LKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLG--DLGRIVHVQIL 166
++ G+ + +L L R + S E DG+T +L A A LG LG H +L
Sbjct: 228 VRFGEYDSALQLFREMQRSFEP-DGYTMQSVLSA--------CAGLGSLSLGTWAHAFLL 278
Query: 167 -KADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKD 225
K DVDV D ++ +L + Y K G + A VF M ++++ S ++I G+ G ++
Sbjct: 279 RKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEE 338
Query: 226 AECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACS 285
A F + VDK R N RPN TF ++ AC+
Sbjct: 339 AMNFFDRMVDK------------------------------RENVRPNSVTFVGLLIACN 368
Query: 286 MVAAFEVGQQVQSQLMK----TPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQK-NV 340
G+Q +++ P H ++D+ ++ G + ++ + M K +
Sbjct: 369 HRGFVNKGRQYFDMMVRDYCIEPALEHY---GCIVDLIARAGYITEAIDMVMSMPMKPDA 425
Query: 341 FSWTSMIDGYGKNG 354
W S++D K G
Sbjct: 426 VIWRSLLDACCKKG 439
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 205 bits (522), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 233/482 (48%), Gaps = 47/482 (9%)
Query: 43 INSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYN 102
+N G IH + K G + + LL +Y K L+ A ++F + K + YN
Sbjct: 263 LNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYN 322
Query: 103 YMIGAYLKQGQV-----EESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDL 157
MI +L+ ++ E+ L + G + TFS++LKA ++ A +
Sbjct: 323 AMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSA------AKTLEY 376
Query: 158 GRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGY 217
GR +H I K + + D+ + +AL + Y G F S++++ S TS+I +
Sbjct: 377 GRQIHALICKNNF--QSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCH 434
Query: 218 MNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTF 277
+ + A +F++ I RP T
Sbjct: 435 VQNEQLESAFDLFRQLFSSHI--------------------------------RPEEYTV 462
Query: 278 ASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQ 337
+ ++ AC+ AA G+Q+Q +K+ + ++ I MY+K G + + +VF +
Sbjct: 463 SLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQN 522
Query: 338 KNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLE 397
+V ++++MI ++G +EAL +F+ M+ +G+ PN FL L AC H GLV +GL+
Sbjct: 523 PDVATYSAMISSLAQHGSANEALNIFESMKT-HGIKPNQQAFLGVLIACCHGGLVTQGLK 581
Query: 398 IFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLH 457
FQ M+N+Y++ P +H+ C+VDLLGR GRL+ A ++ + + W ALLSSCR++
Sbjct: 582 YFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVY 641
Query: 458 GNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACS 517
++ + K A L +L G+YV L N + S E+RE+M++RG+ K+ A S
Sbjct: 642 KDSVIGKRVAERLMELEPEA-SGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALS 700
Query: 518 WV 519
W+
Sbjct: 701 WI 702
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 194/417 (46%), Gaps = 43/417 (10%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ +H ++ G + L+ +Y KC L A +FD ++ ++N +I Y++
Sbjct: 167 GELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVR 226
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
G EE L L+ ++ G L + +LKA G + + + + A +
Sbjct: 227 VGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNE-----GFIEKGMAIHCYTAKL 281
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
+E D V+ TAL D Y KNG + A +F +M KNV++ ++ISG++ D
Sbjct: 282 GMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITD----- 336
Query: 231 QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAF 290
E ++ + ++++DMQR P+ STF+ ++ ACS
Sbjct: 337 ----------------------EASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTL 374
Query: 291 EVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGY 350
E G+Q+ + + K F +GSALI++Y+ G D + F ++++ SWTSMID +
Sbjct: 375 EYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCH 434
Query: 351 GKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKP 410
+N + A +LF+++ + P T +SACA + G +I Y +K
Sbjct: 435 VQNEQLESAFDLFRQL-FSSHIRPEEYTVSLMMSACADFAALSSGEQI-----QGYAIKS 488
Query: 411 RMEHYACV----VDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMA 463
++ + V + + ++G + A + + + + P+ ++A++SS HG+ A
Sbjct: 489 GIDAFTSVKTSSISMYAKSGNMPLANQVFIEV-QNPDVATYSAMISSLAQHGSANEA 544
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 148/324 (45%), Gaps = 50/324 (15%)
Query: 157 LGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISG 216
LG++ H ++K+ ++ + L + Y K + +AR +FD M E+N+IS
Sbjct: 65 LGKLAHGHMIKSSLNPCLYLL--NNLLNMYCKCRELGFARQLFDRMPERNIIS------- 115
Query: 217 YMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNIST 276
FN++I GY++ +++E++++ + N + + T
Sbjct: 116 ------------------------FNSLISGYTQMG-FYEQAMELFLEAREANLKLDKFT 150
Query: 277 FASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMH 336
+A +G C ++G+ + ++ + L + LIDMYSKCG++ + +FD
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 337 QKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACA---HAGLVD 393
+++ SW S+I GY + G +E L L KM + G+ S L AC + G ++
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRD-GLNLTTYALGSVLKACCINLNEGFIE 269
Query: 394 KGLEIFQSMENEYKVKPRMEHYACV----VDLLGRAGRLNQAWEFVMRMPERPNSDVWAA 449
KG+ I + Y K ME V +D+ + G L +A + MP + N + A
Sbjct: 270 KGMAI-----HCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSK-NVVTYNA 323
Query: 450 LLSSCRLHGNTEMAKLAASELFKL 473
++S E+ A+SE FKL
Sbjct: 324 MISG--FLQMDEITDEASSEAFKL 345
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 205 bits (521), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 180/309 (58%), Gaps = 9/309 (2%)
Query: 213 LISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTS--ECATRSLEVYIDMQRLNF 270
+I M G A+ + + D++++ +N MI GY + E A ++L+ + +
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFT--DI 161
Query: 271 RPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRR 330
+PN +FAS + AC+ + + V S ++ + + L SAL+D+Y+KCG + SR
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 331 VFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAG 390
VF + + +V W +MI G+ +G EA+ +F +M+ E+ V P+ +TFL L+ C+H G
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEH-VSPDSITFLGLLTTCSHCG 280
Query: 391 LVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAAL 450
L+++G E F M + ++P++EHY +VDLLGRAGR+ +A+E + MP P+ +W +L
Sbjct: 281 LLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSL 340
Query: 451 LSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGI 510
LSS R + N E+ ++A L K + G YV LSN ++ +KW+S ++RE+M + GI
Sbjct: 341 LSSSRTYKNPELGEIAIQNLSK----AKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGI 396
Query: 511 SKDTACSWV 519
K SW+
Sbjct: 397 RKAKGKSWL 405
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 118/266 (44%), Gaps = 45/266 (16%)
Query: 86 ARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLL-VSGEKLDGFTFSMILKAST 144
A++V + D+ + +N MIG Y++ Q EE+L ++ +L + K + F+F+ L A
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAA-- 174
Query: 145 STSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSE 204
A LGDL V L D +E + +L +AL D Y K G I +R VF +
Sbjct: 175 ------CARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKR 228
Query: 205 KNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYID 264
+V ++I+G+ GL AT ++ V+ +
Sbjct: 229 NDVSIWNAMITGFATHGL--------------------------------ATEAIRVFSE 256
Query: 265 MQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLG--SALIDMYSKC 322
M+ + P+ TF ++ CS E G++ LM F KL A++D+ +
Sbjct: 257 MEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFG-LMSRRFSIQPKLEHYGAMVDLLGRA 315
Query: 323 GRVVDSRRVFDHMH-QKNVFSWTSMI 347
GRV ++ + + M + +V W S++
Sbjct: 316 GRVKEAYELIESMPIEPDVVIWRSLL 341
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 205 bits (521), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 157/550 (28%), Positives = 255/550 (46%), Gaps = 100/550 (18%)
Query: 51 GQTIHSHILKTGFVPNTNISIK--LLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAY 108
G +H H+L + + N+ + L+ +Y KC + YARQVFD + ++ + ++ +I Y
Sbjct: 78 GINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGY 137
Query: 109 LKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLG-DLGRIVHVQILK 167
++ G +E L +L S + FT S +L + G+ V L LG +H I
Sbjct: 138 VQAGNEQEGFCLFSSML-SHCFPNEFTLSSVLTSCRYEPGKQVHGLALKLG--LHCSIYV 194
Query: 168 ADVDVEKDDVLCTALTDSY--VKNGRIAY-ARTVFDVMSEKNVISSTSLISGYMNQGLFK 224
A+ A+ Y +G AY A TVF+ + KN+++ S+I+ + L K
Sbjct: 195 AN-----------AVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGK 243
Query: 225 DAECIFQK-----------------------------------------TVDKDIV---- 239
A +F + TV +V
Sbjct: 244 KAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTE 303
Query: 240 VFNAMIEGYSKTSECATRSLEVYIDMQR----LNFRPNISTFA----------------- 278
V A+I+ YS+ E T +++++M + + I+ FA
Sbjct: 304 VATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDPERAIHLFGQLRQE 363
Query: 279 ----------SIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDS 328
S++ AC+ + + +Q++K F L ++LI Y+KCG +
Sbjct: 364 KLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLC 423
Query: 329 RRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAH 388
RVFD M ++V SW SM+ Y +G D L +FQKM I P+ TF++ LSAC+H
Sbjct: 424 MRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDIN----PDSATFIALLSACSH 479
Query: 389 AGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWA 448
AG V++GL IF+SM + + P++ HYACV+D+L RA R +A E + +MP P++ VW
Sbjct: 480 AGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWI 539
Query: 449 ALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKER 508
ALL SCR HGNT + KLAA +L +L +Y+ +SN A ++ + + M+
Sbjct: 540 ALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETW 599
Query: 509 GISKDTACSW 518
+ K+ SW
Sbjct: 600 RVRKEPDLSW 609
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
Query: 276 TFASIIGACSMVAAFEVGQQVQSQLMKTPFF--GHIKLGSALIDMYSKCGRVVDSRRVFD 333
+A++ AC+ G + ++ P+ ++ L + LI+MY+KCG ++ +R+VFD
Sbjct: 61 AYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFD 120
Query: 334 HMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSAC 386
M ++NV SWT++I GY + G E LF M PN T S L++C
Sbjct: 121 TMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSH--CFPNEFTLSSVLTSC 171
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 13/152 (8%)
Query: 3 NGILRPFFSSRALFSPHQPF-----LQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSH 57
NGI+ F A++ P + L+ P S+ L+ T +IH+
Sbjct: 339 NGIITAF----AVYDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQ 394
Query: 58 ILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEES 117
++K GF+ +T ++ L+ Y KC L +VFDD+ + + ++N M+ AY GQV+
Sbjct: 395 VIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSI 454
Query: 118 LGLVRRLLVSGEKLDGFTFSMILKASTSTSGR 149
L + +++ ++ D TF +L A S +GR
Sbjct: 455 LPVFQKMDINP---DSATFIALLSA-CSHAGR 482
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/431 (30%), Positives = 223/431 (51%), Gaps = 50/431 (11%)
Query: 102 NYMIGAYLKQGQ-VEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRI 160
N+ + YL+ G+ ++ L R S +D F+ +K S++ ++ GR
Sbjct: 32 NHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLD-----GRQ 86
Query: 161 VHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQ 220
+H + K + + T+L Y G + YAR VFD EK
Sbjct: 87 IHALVRKLGFNAVIQ--IQTSLVGFYSSVGDVDYARQVFDETPEK--------------- 129
Query: 221 GLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASI 280
++IV++ AMI Y++ +E + ++E++ M+ +
Sbjct: 130 ---------------QNIVLWTAMISAYTE-NENSVEAIELFKRMEAEKIELDGVIVTVA 173
Query: 281 IGACSMVAAFEVGQQVQSQLMKTP--FFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQK 338
+ AC+ + A ++G+++ S+ +K + L ++L++MY K G +R++FD +K
Sbjct: 174 LSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRK 233
Query: 339 NVFSWTSMIDGYGKNGFPDEALELFQKMQI-----EYGVVPNFVTFLSALSACAHAGLVD 393
+V ++TSMI GY NG E+LELF+KM+ + + PN VTF+ L AC+H+GLV+
Sbjct: 234 DVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVE 293
Query: 394 KGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSS 453
+G F+SM +Y +KPR H+ C+VDL R+G L A EF+ +MP +PN+ +W LL +
Sbjct: 294 EGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGA 353
Query: 454 CRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKD 513
C LHGN E+ + +F+L+ + G YVALSN A+ WD S++R+ +++R +
Sbjct: 354 CSLHGNVELGEEVQRRIFELDRD-HVGDYVALSNIYASKGMWDEKSKMRDRVRKRRMP-- 410
Query: 514 TACSWVGADSV 524
SW+ S+
Sbjct: 411 -GKSWIELGSI 420
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 173/396 (43%), Gaps = 60/396 (15%)
Query: 2 NNGILRPFFSS----RALFSPHQPFLQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSH 57
+N L+ + S +AL F Q+ FV ++L + G+ IH+
Sbjct: 31 SNHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHAL 90
Query: 58 ILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDK-TLSAYNYMIGAYLKQGQVEE 116
+ K GF I L+ Y + YARQVFD+ +K + + MI AY + E
Sbjct: 91 VRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVE 150
Query: 117 SLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLG--DLGRIVHVQILKADVDVEK 174
++ L +R+ +LDG ++ L A A LG +G ++ + +K +
Sbjct: 151 AIELFKRMEAEKIELDGVIVTVALSA--------CADLGAVQMGEEIYSRSIKRKRRLAM 202
Query: 175 DDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQ--K 232
D L +L + YVK+G AR +FD K+V + TS+I GY G +++ +F+ K
Sbjct: 203 DLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMK 262
Query: 233 TVD--KDIVV--------------------------FNAMIEGYS-KTSE---------- 253
T+D +D V+ F +MI Y+ K E
Sbjct: 263 TIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLF 322
Query: 254 CATRSL-EVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLG 312
C + L + + + ++ +PN + +++GACS+ E+G++VQ ++ + H+
Sbjct: 323 CRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELD-RDHVGDY 381
Query: 313 SALIDMYSKCGRVVDSRRVFDHMHQKNV--FSWTSM 346
AL ++Y+ G + ++ D + ++ + SW +
Sbjct: 382 VALSNIYASKGMWDEKSKMRDRVRKRRMPGKSWIEL 417
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 140/523 (26%), Positives = 255/523 (48%), Gaps = 41/523 (7%)
Query: 30 PHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQV 89
P ++ L + L+ N S + +H ++ K GFV NT +S L+ Y + L A +V
Sbjct: 53 PDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKV 112
Query: 90 FDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGR 149
FD++ D + ++N ++ Y++ G+ +E + L L S + F+F+ L A
Sbjct: 113 FDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLH-- 170
Query: 150 NVAPLGDLGRIVHVQILKADVDVEKDDVLC-TALTDSYVKNGRIAYARTVFDVMSEKNVI 208
L LG +H +++K + +EK +V+ L D Y K G + A VF M EK+ +
Sbjct: 171 ----LSPLGACIHSKLVK--LGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTV 224
Query: 209 SSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKT----------------- 251
S ++++ G + F + + D V +N +I+ + K+
Sbjct: 225 SWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPN 284
Query: 252 -------------SECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQS 298
SE + + E + M R + + + ++ A + +A G + +
Sbjct: 285 SSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHA 344
Query: 299 QLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDE 358
K + + SALIDMYSKCG + + +F M +KN+ W MI GY +NG E
Sbjct: 345 CAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIE 404
Query: 359 ALELFQKMQIEYGVVPNFVTFLSALSACAHAGL-VDKGLEIFQSMENEYKVKPRMEHYAC 417
A++LF +++ E + P+ TFL+ L+ C+H + ++ L F+ M NEY++KP +EH
Sbjct: 405 AIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCS 464
Query: 418 VVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKL-NAN 476
++ +G+ G + QA + + + W ALL +C + + AK A+++ +L +A+
Sbjct: 465 LIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDAD 524
Query: 477 GRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
Y+ +SN A E+W V ++R++M+E G+ K+ SW+
Sbjct: 525 KDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWI 567
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 92/193 (47%), Gaps = 2/193 (1%)
Query: 271 RPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRR 330
+P+ S ++ + +Q+ + K F + +L ++L+ Y + D+ +
Sbjct: 52 KPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHK 111
Query: 331 VFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAG 390
VFD M +V SW S++ GY ++G E + LF ++ V PN +F +AL+ACA
Sbjct: 112 VFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELH-RSDVFPNEFSFTAALAACARLH 170
Query: 391 LVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAAL 450
L G I + K + C++D+ G+ G ++ A V + E ++ W A+
Sbjct: 171 LSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDA-VLVFQHMEEKDTVSWNAI 229
Query: 451 LSSCRLHGNTEMA 463
++SC +G E+
Sbjct: 230 VASCSRNGKLELG 242
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/474 (27%), Positives = 238/474 (50%), Gaps = 50/474 (10%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ H ++ GF N IS L LY AR+VFD++ + + + ++ A+ K
Sbjct: 182 GRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSK 241
Query: 111 QGQVEESLGLVRRLLVSGEKL--DGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKA 168
EE+LGL + G+ L DG TF +L A G+L R+
Sbjct: 242 NDLYEEALGLFYAMH-RGKGLVPDGSTFGTVLTAC-----------GNLRRL-------- 281
Query: 169 DVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAEC 228
K G+ + + + + + NV+ +SL+ Y G ++A
Sbjct: 282 -------------------KQGKEIHGKLITNGIGS-NVVVESSLLDMYGKCGSVREARQ 321
Query: 229 IFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVA 288
+F K+ V ++A++ GY + E +++E++ +M+ ++ F +++ AC+ +A
Sbjct: 322 VFNGMSKKNSVSWSALLGGYCQNGE-HEKAIEIFREMEE----KDLYCFGTVLKACAGLA 376
Query: 289 AFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMID 348
A +G+++ Q ++ FG++ + SALID+Y K G + + RV+ M +N+ +W +M+
Sbjct: 377 AVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLS 436
Query: 349 GYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKV 408
+NG +EA+ F M ++ G+ P++++F++ L+AC H G+VD+G F M Y +
Sbjct: 437 ALAQNGRGEEAVSFFNDM-VKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGI 495
Query: 409 KPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGN-TEMAKLAA 467
KP EHY+C++DLLGRAG +A + R R ++ +W LL C + + + +A+ A
Sbjct: 496 KPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIA 555
Query: 468 SELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWVGA 521
+ +L +YV LSN A + +R++M RG++K SW+ A
Sbjct: 556 KRMMELEPKYHM-SYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWIDA 608
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 129/262 (49%), Gaps = 6/262 (2%)
Query: 203 SEKNVISSTSLISGYMNQGL-FKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEV 261
+++NV SL+S Y G ++ +F KD + + +M+ GY E ++LEV
Sbjct: 94 TDRNV--GNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKE-HVKALEV 150
Query: 262 YIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSK 321
+++M N T +S + ACS + +G+ ++ F + + S L +Y
Sbjct: 151 FVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGV 210
Query: 322 CGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLS 381
VD+RRVFD M + +V WT+++ + KN +EAL LF M G+VP+ TF +
Sbjct: 211 NREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGT 270
Query: 382 ALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPER 441
L+AC + + +G EI + + + + ++D+ G+ G + +A + M ++
Sbjct: 271 VLTACGNLRRLKQGKEIHGKLITN-GIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKK 329
Query: 442 PNSDVWAALLSSCRLHGNTEMA 463
NS W+ALL +G E A
Sbjct: 330 -NSVSWSALLGGYCQNGEHEKA 350
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 140/347 (40%), Gaps = 52/347 (14%)
Query: 28 FVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYAR 87
VP + L N G+ IH ++ G N + LL +Y KC +R AR
Sbjct: 261 LVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREAR 320
Query: 88 QVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTS 147
QVF+ + K +++ ++G Y + G+ E+++ + R + E+ D + F +LKA +
Sbjct: 321 QVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM----EEKDLYCFGTVLKACAGLA 376
Query: 148 GRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNV 207
LG+ +H Q YV+ G NV
Sbjct: 377 AVR------LGKEIHGQ---------------------YVRRGCFG------------NV 397
Query: 208 ISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQR 267
I ++LI Y G A ++ K ++++ +NAM+ ++ ++ + DM +
Sbjct: 398 IVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGR-GEEAVSFFNDMVK 456
Query: 268 LNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLG----SALIDMYSKCG 323
+P+ +F +I+ AC + G+ + K+ +G IK G S +ID+ + G
Sbjct: 457 KGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKS--YG-IKPGTEHYSCMIDLLGRAG 513
Query: 324 RVVDSRRVFDHMHQKNVFS-WTSMIDGYGKNGFPDEALELFQKMQIE 369
++ + + +N S W ++ N E K +E
Sbjct: 514 LFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMME 560
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 135/463 (29%), Positives = 227/463 (49%), Gaps = 51/463 (11%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDL--RDKTLSAYNYMIGAY 108
G +H I N IS KL+ LY C A +VFD + RD + A+N +I Y
Sbjct: 111 GVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGY 170
Query: 109 LKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKA 168
+ GQ E+++ L ++ G K D FTF +LKA + G +H ++K
Sbjct: 171 AELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQI------GEAIHRDLVKE 224
Query: 169 DVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAEC 228
D + AL Y K G I AR VFD++ K
Sbjct: 225 GFGY--DVYVLNALVVMYAKCGDIVKARNVFDMIPHK----------------------- 259
Query: 229 IFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVA 288
D V +N+M+ GY +L+++ M + P+ +S++ + V
Sbjct: 260 --------DYVSWNSMLTGYLHHG-LLHEALDIFRLMVQNGIEPDKVAISSVL---ARVL 307
Query: 289 AFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMID 348
+F+ G+Q+ +++ + + +ALI +YSK G++ + +FD M +++ SW ++I
Sbjct: 308 SFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIIS 367
Query: 349 GYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKV 408
+ KN L+ F++M P+ +TF+S LS CA+ G+V+ G +F M EY +
Sbjct: 368 AHSKN---SNGLKYFEQMH-RANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGI 423
Query: 409 KPRMEHYACVVDLLGRAGRLNQAWEFVMR-MPERPNSDVWAALLSSCRLHGNTEMAKLAA 467
P+MEHYAC+V+L GRAG + +A+ +++ M VW ALL +C LHGNT++ ++AA
Sbjct: 424 DPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAA 483
Query: 468 SELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGI 510
LF+L + + L + A++ + V +R++M +RG+
Sbjct: 484 QRLFELEPDNEHN-FELLIRIYSKAKRAEDVERVRQMMVDRGL 525
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 16/240 (6%)
Query: 277 FASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMH 336
FAS++ C + A + G +V + ++ + S L+ +Y+ CG + VFD M
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 337 QKNV--FSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDK 394
+++ F+W S+I GY + G ++A+ L+ +M E GV P+ TF L AC G V
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMALYFQMA-EDGVKPDRFTFPRVLKACGGIGSVQI 213
Query: 395 GLEIFQSMENE---YKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALL 451
G I + + E Y V +V + + G + +A +P + + W ++L
Sbjct: 214 GEAIHRDLVKEGFGYDVYV----LNALVVMYAKCGDIVKARNVFDMIPHK-DYVSWNSML 268
Query: 452 SSCRLHGNTEMAKLAASELFKLNA-NGRPGAYVALSNTLAAAEKWDSVSELREVMKERGI 510
+ HG A ++F+L NG VA+S+ LA + +L + RG+
Sbjct: 269 TGYLHHGLLH----EALDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQLHGWVIRRGM 324
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 124/469 (26%), Positives = 219/469 (46%), Gaps = 76/469 (16%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G +H I+K+GF N + L+ +Y KC + AR + + + + ++N MI ++
Sbjct: 246 GVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVR 305
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
QG + E+L + R+ K+D FT IL
Sbjct: 306 QGLIGEALSMFGRMHERDMKIDDFTIPSILN----------------------------- 336
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
C AL+ + +K A+ V + ++++ +L+ Y +G+ A +F
Sbjct: 337 --------CFALSRTEMKIASSAHCLIVKTGYATYKLVNN-ALVDMYAKRGIMDSALKVF 387
Query: 231 QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAF 290
+ ++KD++ + A++ G + +L+++ +M+ P+ AS++ A + +
Sbjct: 388 EGMIEKDVISWTALVTGNTHNGS-YDEALKLFCNMRVGGITPDKIVTASVLSASAELTLL 446
Query: 291 EVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGY 350
E GQQV +K+ F + + ++L+ MY+KCG + D+ +F+ M +++ +WT +I GY
Sbjct: 447 EFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGY 506
Query: 351 GKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKP 410
KNG ++A F M+ YG+ P P
Sbjct: 507 AKNGLLEDAQRYFDSMRTVYGITPG----------------------------------P 532
Query: 411 RMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASEL 470
EHYAC++DL GR+G + + + +M P++ VW A+L++ R HGN E + AA L
Sbjct: 533 --EHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTL 590
Query: 471 FKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
+L N YV LSN +AA + D + +R +MK R ISK+ CSWV
Sbjct: 591 MELEPNNAV-PYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWV 638
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 125/485 (25%), Positives = 206/485 (42%), Gaps = 92/485 (18%)
Query: 18 PHQPFLQN-HDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHIL------KTGFVPNTNIS 70
P +PF H + + L SN L D SG+ + + + F NT
Sbjct: 12 PLKPFGSCIHSYADRTKLHSNLLL----GDLSKSGRVDEARQMFDKMPERDEFTWNT--- 64
Query: 71 IKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEK 130
++V Y L A ++F K ++N +I Y K G E+ L + G K
Sbjct: 65 --MIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIK 122
Query: 131 LDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNG 190
+ +T +L+ TS L G +H +K D++ + V L Y +
Sbjct: 123 PNEYTLGSVLRMCTSLV------LLLRGEQIHGHTIKTGFDLDVNVV--NGLLAMYAQCK 174
Query: 191 RIAYARTVFDVMS-EKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYS 249
RI+ A +F+ M EKN ++ TS M+ GYS
Sbjct: 175 RISEAEYLFETMEGEKNNVTWTS-------------------------------MLTGYS 203
Query: 250 KTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHI 309
+ A +++E + D++R + N TF S++ AC+ V+A VG QV ++K+ F +I
Sbjct: 204 QNG-FAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNI 262
Query: 310 KLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQK---- 365
+ SALIDMY+KC + +R + + M +V SW SMI G + G EAL +F +
Sbjct: 263 YVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHER 322
Query: 366 -MQIEYGVVPNFVTFLS------ALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACV 418
M+I+ +P+ + + +++ AH +V G ++ + N +
Sbjct: 323 DMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNN------------AL 370
Query: 419 VDLLGRAGRLNQAWEFVMRMPERPNSDV--WAALLSSCRLHGNTEMAKLAASELFKLNAN 476
VD+ + G ++ A + M E+ DV W AL++ GNT + E KL N
Sbjct: 371 VDMYAKRGIMDSALKVFEGMIEK---DVISWTALVT-----GNTHNG--SYDEALKLFCN 420
Query: 477 GRPGA 481
R G
Sbjct: 421 MRVGG 425
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/435 (29%), Positives = 213/435 (48%), Gaps = 20/435 (4%)
Query: 23 LQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNC 82
+ H F P+ + L S G+ IH ++K G + L+ Y KC
Sbjct: 307 MPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGN 366
Query: 83 LRYARQVFDDLRDKTLSAYNYMIGAYL-KQGQVEESLGLVRRLLVSGEKLDGFTFSMILK 141
L +R FD +RDK + +N ++ Y K G + L L ++L G + +TFS LK
Sbjct: 367 LEDSRLCFDYIRDKNIVCWNALLSGYANKDGPI--CLSLFLQMLQMGFRPTEYTFSTALK 424
Query: 142 ASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDV 201
+ T + + H I++ + E +D + ++L SY KN + A + D
Sbjct: 425 SCCVTELQQL----------HSVIVR--MGYEDNDYVLSSLMRSYAKNQLMNDALLLLDW 472
Query: 202 MSEKNVISSTSLISG-YMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLE 260
S + ++++G Y +G + ++ + D V +N I S+ S+ +E
Sbjct: 473 ASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSR-SDYHEEVIE 531
Query: 261 VYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPF-FGHIKLGSALIDMY 319
++ M + N RP+ TF SI+ CS + +G + + KT F + + LIDMY
Sbjct: 532 LFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMY 591
Query: 320 SKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTF 379
KCG + +VF+ +KN+ +WT++I G +G+ EALE F K + G P+ V+F
Sbjct: 592 GKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKF-KETLSLGFKPDRVSF 650
Query: 380 LSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMP 439
+S L+AC H G+V +G+ +FQ M+ +Y V+P M+HY C VDLL R G L +A + MP
Sbjct: 651 ISILTACRHGGMVKEGMGLFQKMK-DYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMP 709
Query: 440 ERPNSDVWAALLSSC 454
++ VW L C
Sbjct: 710 FPADAPVWRTFLDGC 724
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 132/494 (26%), Positives = 214/494 (43%), Gaps = 89/494 (18%)
Query: 28 FVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTG-FVPNTNISIKLLVLYLKCNCLRYA 86
++P+ + +S L S +G +H LK G F+ + + LL LY + + L A
Sbjct: 111 YLPNQSTVSGLLS--CASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMA 168
Query: 87 RQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTST 146
QVF+D+ K+L +N+M+ +G ++E + R L+ G L +F +LK +
Sbjct: 169 EQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCV 228
Query: 147 SGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKN 206
D+ + +H K +D E V
Sbjct: 229 KDL------DISKQLHCSATKKGLDCEISVV----------------------------- 253
Query: 207 VISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQ 266
SLIS Y G AE +FQ DIV +NA+I +K SE ++L++++ M
Sbjct: 254 ----NSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAK-SENPLKALKLFVSMP 308
Query: 267 RLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVV 326
F PN T+ S++G S+V G+Q+ L+K I LG+ALID Y+KCG +
Sbjct: 309 EHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLE 368
Query: 327 DSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSAC 386
DSR FD++ KN+ W +++ GY P L LF +M ++ G P TF +AL +C
Sbjct: 369 DSRLCFDYIRDKNIVCWNALLSGYANKDGPI-CLSLFLQM-LQMGFRPTEYTFSTALKSC 426
Query: 387 A-------HAGLVDKGLEIFQSMENEYKVKPRMEHYA----------------------- 416
H+ +V G E +N+Y + M YA
Sbjct: 427 CVTELQQLHSVIVRMGYE-----DNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVP 481
Query: 417 --CVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFK-- 472
V + R G+ +++ + + + E+P++ W +++C E ELFK
Sbjct: 482 LNIVAGIYSRRGQYHESVKLISTL-EQPDTVSWNIAIAACSRSDYHE----EVIELFKHM 536
Query: 473 LNANGRPGAYVALS 486
L +N RP Y +S
Sbjct: 537 LQSNIRPDKYTFVS 550
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 97/239 (40%), Gaps = 47/239 (19%)
Query: 178 LCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKD 237
+C + Y K G ++ A VFD M E+N +S
Sbjct: 51 VCNNIISLYEKLGEVSLAGKVFDQMPERNKVS---------------------------- 82
Query: 238 IVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQ 297
FN +I+GYSK + ++ V+ +M+ + PN ST + ++ S+ G Q+
Sbjct: 83 ---FNTIIKGYSKYGD-VDKAWGVFSEMRYFGYLPNQSTVSGLLSCASL--DVRAGTQLH 136
Query: 298 SQLMKTPFF-GHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFP 356
+K F +G+ L+ +Y + + + +VF+ M K++ +W M+ G GF
Sbjct: 137 GLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFL 196
Query: 357 DEALELFQKMQIEYGVVPNFVTFLSALSACA-----------HAGLVDKGLEIFQSMEN 404
E + F+++ + G +FL L + H KGL+ S+ N
Sbjct: 197 KECMFFFREL-VRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVN 254
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 93/202 (46%), Gaps = 16/202 (7%)
Query: 315 LIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVP 374
+I +Y K G V + +VFD M ++N S+ ++I GY K G D+A +F +M+ +G +P
Sbjct: 55 IISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRY-FGYLP 113
Query: 375 NFVTFLSALSACA----HAGLVDKGLEIFQS--MENEYKVKPRMEHYACVVDLLGRAGRL 428
N T +S L +CA AG GL + M + + C++ L GR L
Sbjct: 114 NQST-VSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFV-------GTCLLCLYGRLDLL 165
Query: 429 NQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNT 488
A + MP + + + W ++S G + EL ++ A+ +++ +
Sbjct: 166 EMAEQVFEDMPFK-SLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKG 224
Query: 489 LAAAEKWDSVSELREVMKERGI 510
++ + D +L ++G+
Sbjct: 225 VSCVKDLDISKQLHCSATKKGL 246
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 195 bits (496), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 136/470 (28%), Positives = 237/470 (50%), Gaps = 43/470 (9%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRY-ARQVFDDLRDKTLSAYNYMIGAYL 109
G+ IHS +K GF +T++ L+ +Y+KC+ A +VF + + ++ +I +
Sbjct: 344 GKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLV 403
Query: 110 KQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKAD 169
G V++ GL+ ++ + + T S +L+A + R+V + + +H +L+
Sbjct: 404 DHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKL--RHVRRVLE----IHAYLLRRH 457
Query: 170 VDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECI 229
VD E V+ +L D+Y + ++ YA V M ++ I+ TSL++ + G + A
Sbjct: 458 VDGEM--VVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMA--- 512
Query: 230 FQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAA 289
+ V N M Y D R + + I A + + A
Sbjct: 513 --------LSVINYM-----------------YGD----GIRMDQLSLPGFISASANLGA 543
Query: 290 FEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDG 349
E G+ + +K+ F G + ++L+DMYSKCG + D+++VF+ + +V SW ++ G
Sbjct: 544 LETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSG 603
Query: 350 YGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVK 409
NGF AL F++M+++ P+ VTFL LSAC++ L D GLE FQ M+ Y ++
Sbjct: 604 LASNGFISSALSAFEEMRMKE-TEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIE 662
Query: 410 PRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASE 469
P++EHY +V +LGRAGRL +A V M +PN+ ++ LL +CR GN + + A++
Sbjct: 663 PQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANK 722
Query: 470 LFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
L A P Y+ L++ + K + + R +M E+ +SK S V
Sbjct: 723 GLAL-APSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTV 771
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 210/451 (46%), Gaps = 52/451 (11%)
Query: 49 SSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAY 108
S G +H ++KTGF N+ + L LY KC + A ++F L++ ++ MI +
Sbjct: 141 SYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSL 200
Query: 109 LKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLG-DLGRIVHVQILK 167
+ + E+L ++ +G + FTF +L AS+ LG + G+ +H I+
Sbjct: 201 VGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSF--------LGLEFGKTIHSNIIV 252
Query: 168 ADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAE 227
+ + + VL T+L D Y + ++ A V + E++V TS++SG++ K+A
Sbjct: 253 RGIPL--NVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEA- 309
Query: 228 CIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMV 287
+ +++M+ L +PN T+++I+ CS V
Sbjct: 310 -------------------------------VGTFLEMRSLGLQPNNFTYSAILSLCSAV 338
Query: 288 AAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKC-GRVVDSRRVFDHMHQKNVFSWTSM 346
+ + G+Q+ SQ +K F +G+AL+DMY KC V++ RVF M NV SWT++
Sbjct: 339 RSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTL 398
Query: 347 IDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEY 406
I G +GF + L +M ++ V PN VT L AC+ V + LEI + +
Sbjct: 399 ILGLVDHGFVQDCFGLLMEM-VKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRH 457
Query: 407 KVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLA 466
V M +VD + +++ AW + M R N + +L++ G EMA
Sbjct: 458 -VDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNI-TYTSLVTRFNELGKHEMALSV 515
Query: 467 ASELF----KLNANGRPGAYVALSNTLAAAE 493
+ ++ +++ PG +++ S L A E
Sbjct: 516 INYMYGDGIRMDQLSLPG-FISASANLGALE 545
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 175/359 (48%), Gaps = 46/359 (12%)
Query: 42 YINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAY 101
+ S++ G IH ++K G + N ++ LL LYLK + + AR++FD++ +T+ A+
Sbjct: 33 FCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAW 92
Query: 102 NYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDL--GR 159
MI A+ K + +L L ++ SG + FTFS ++ R+ A L D+ G
Sbjct: 93 TVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVV--------RSCAGLRDISYGG 144
Query: 160 IVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMN 219
VH ++K E + V+ ++L+D Y K G+ A +F + + IS T +IS +
Sbjct: 145 RVHGSVIKTGF--EGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVG 202
Query: 220 QGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFAS 279
+++A L+ Y +M + PN TF
Sbjct: 203 ARKWREA--------------------------------LQFYSEMVKAGVPPNEFTFVK 230
Query: 280 IIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKN 339
++GA S + E G+ + S ++ ++ L ++L+D YS+ ++ D+ RV + +++
Sbjct: 231 LLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQD 289
Query: 340 VFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEI 398
VF WTS++ G+ +N EA+ F +M+ G+ PN T+ + LS C+ +D G +I
Sbjct: 290 VFLWTSVVSGFVRNLRAKEAVGTFLEMR-SLGLQPNNFTYSAILSLCSAVRSLDFGKQI 347
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 152/349 (43%), Gaps = 67/349 (19%)
Query: 157 LGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISG 216
+G +H ++K + +E D LC L Y+K I AR +FD MS + V + T
Sbjct: 41 IGLHIHCPVIKFGL-LENLD-LCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWT----- 93
Query: 217 YMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNIST 276
MI ++K+ E A+ +L ++ +M PN T
Sbjct: 94 --------------------------VMISAFTKSQEFAS-ALSLFEEMMASGTHPNEFT 126
Query: 277 FASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMH 336
F+S++ +C+ + G +V ++KT F G+ +GS+L D+YSKCG+ ++ +F +
Sbjct: 127 FSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQ 186
Query: 337 QKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACA--------- 387
+ SWT MI EAL+ + +M ++ GV PN TF+ L A +
Sbjct: 187 NADTISWTMMISSLVGARKWREALQFYSEM-VKAGVPPNEFTFVKLLGASSFLGLEFGKT 245
Query: 388 -HAGLVDKGLEI--------------FQSMENEYKV-----KPRMEHYACVVDLLGRAGR 427
H+ ++ +G+ + F ME+ +V + + + VV R R
Sbjct: 246 IHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLR 305
Query: 428 LNQAWEFVMRMPE---RPNSDVWAALLSSCRLHGNTEMAKLAASELFKL 473
+A + M +PN+ ++A+LS C + + K S+ K+
Sbjct: 306 AKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKV 354
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 75/156 (48%), Gaps = 7/156 (4%)
Query: 50 SGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYL 109
+G+ +H + +K+GF ++ L+ +Y KC L A++VF+++ + ++N ++
Sbjct: 546 TGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLA 605
Query: 110 KQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKAD 169
G + +L + + + D TF ++L A ++GR L DLG + + Q++K
Sbjct: 606 SNGFISSALSAFEEMRMKETEPDSVTFLILLSA--CSNGR----LTDLG-LEYFQVMKKI 658
Query: 170 VDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEK 205
++E L + GR+ A V + M K
Sbjct: 659 YNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLK 694
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 144/519 (27%), Positives = 246/519 (47%), Gaps = 34/519 (6%)
Query: 6 LRPFFSSRALFSPHQPFLQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVP 65
+R F +SR + P L+ V S +++ Q +H+ ++ +G
Sbjct: 7 IRQFVTSRFIV-PGTGLLKGFKLVEDSNSITHLFQ-------------VHARLITSGNFW 52
Query: 66 NTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLL 125
+++ +I+LL + Y ++ + L N + AYL +++LG +L
Sbjct: 53 DSSWAIRLLKSSSRFGDSSYTVSIYRSI--GKLYCANPVFKAYLVSSSPKQALGFYFDIL 110
Query: 126 VSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCT--ALT 183
G D +TF ++ T D G++ H Q +K D VL +L
Sbjct: 111 RFGFVPDSYTFVSLISCIEKTC------CVDSGKMCHGQAIKHGCD----QVLPVQNSLM 160
Query: 184 DSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNA 243
Y G + A+ +F + +++++S S+I+G + G A +F + DK+I+ +N
Sbjct: 161 HMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNI 220
Query: 244 MIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKT 303
MI Y + S+ ++ +M R F+ N ST ++ AC A + G+ V + L++T
Sbjct: 221 MISAYLGANNPGV-SISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRT 279
Query: 304 PFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELF 363
+ + +ALIDMY KC V +RR+FD + +N +W MI + +G P+ LELF
Sbjct: 280 FLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELF 339
Query: 364 QKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLG 423
+ M I + P+ VTF+ L CA AGLV +G + M +E+++KP H C+ +L
Sbjct: 340 EAM-INGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYS 398
Query: 424 RAGRLNQAWEFVMRMPER---PNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPG 480
AG +A E + +P+ P S WA LLSS R GN + + A L + +
Sbjct: 399 SAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYK- 457
Query: 481 AYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
Y L N + +W+ V+ +RE++KER I + C V
Sbjct: 458 YYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLV 496
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 191 bits (486), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 202/393 (51%), Gaps = 14/393 (3%)
Query: 132 DGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGR 191
D TF + KA + ++ L + +H Q L+ + D L Y
Sbjct: 114 DFHTFPFVFKACAAKKNGDLT----LVKTLHCQALR--FGLLSDLFTLNTLIRVYSLIAP 167
Query: 192 IAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKT 251
I A +FD +++V++ LI G + A +F +D+V +N++I GY++
Sbjct: 168 IDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQM 227
Query: 252 SECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKL 311
+ C +++++ +M L +P+ S + AC+ ++ G+ + + F L
Sbjct: 228 NHC-REAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFL 286
Query: 312 GSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYG 371
+ L+D Y+KCG + + +F+ K +F+W +MI G +G + ++ F+KM + G
Sbjct: 287 ATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKM-VSSG 345
Query: 372 VVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQA 431
+ P+ VTF+S L C+H+GLVD+ +F M + Y V M+HY C+ DLLGRAG + +A
Sbjct: 346 IKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEA 405
Query: 432 WEFVMRMPE----RPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSN 487
E + +MP+ R W+ LL CR+HGN E+A+ AA+ + L+ G Y +
Sbjct: 406 AEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPED-GGVYKVMVE 464
Query: 488 TLAAAEKWDSVSELREVM-KERGISKDTACSWV 519
A AE+W+ V ++RE++ +++ + K+ S V
Sbjct: 465 MYANAERWEEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 135/369 (36%), Gaps = 94/369 (25%)
Query: 86 ARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTS 145
AR++FD + + L ++N +I Y + E++ L ++ G K D L A
Sbjct: 202 ARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQ 261
Query: 146 TSGRNVAPLGDL--GRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMS 203
+ GD G+ +H + + + D L T L D Y K G I A +F++ S
Sbjct: 262 S--------GDWQKGKAIHDYTKRKRLFI--DSFLATGLVDFYAKCGFIDTAMEIFELCS 311
Query: 204 EKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYI 263
+K + + ++I+G G + F+K V I
Sbjct: 312 DKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGI------------------------- 346
Query: 264 DMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCG 323
+P+ TF S++ CS S L+D
Sbjct: 347 -------KPDGVTFISVLVGCSH--------------------------SGLVD------ 367
Query: 324 RVVDSRRVFDHMH-----QKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVT 378
++R +FD M + + + M D G+ G +EA E+ ++M + G +
Sbjct: 368 ---EARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLA 424
Query: 379 FLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEH--YACVVDLLGRAGRLNQAWEFVM 436
+ L C G +EI + N K + Y +V++ A R WE V+
Sbjct: 425 WSGLLGGCRIHG----NIEIAEKAANRVKALSPEDGGVYKVMVEMYANAER----WEEVV 476
Query: 437 RMPERPNSD 445
++ E + D
Sbjct: 477 KVREIIDRD 485
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%)
Query: 30 PHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQV 89
P + + +TL S G+ IH + + ++ ++ L+ Y KC + A ++
Sbjct: 247 PDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEI 306
Query: 90 FDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMIL 140
F+ DKTL +N MI G E ++ R+++ SG K DG TF +L
Sbjct: 307 FELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVL 357
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/475 (25%), Positives = 242/475 (50%), Gaps = 7/475 (1%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ +H I + N + L+ +Y + + AR++FD + ++ ++N +I Y
Sbjct: 203 GRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTS 262
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
+ ++ E+ L+ R+ +SG + T++ I +G + L + + + + V
Sbjct: 263 EEKLGEAFKLLDRMYLSGVEASIVTWNTI-AGGCLEAGNYIGALNCVVGMRNCNVRIGSV 321
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVIS-STSLISGYMNQGLFKDAECI 229
+ C+ + +K G++ + + ++ + SLI+ Y + A +
Sbjct: 322 AMINGLKACSHI--GALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIV 379
Query: 230 FQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAA 289
FQ+ + +N++I G++ S + +M F PN T ASI+ + V
Sbjct: 380 FQQVEANSLSTWNSIISGFAYNERSEETSF-LLKEMLLSGFHPNHITLASILPLFARVGN 438
Query: 290 FEVGQQVQSQLMKTPFFGH-IKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMID 348
+ G++ +++ + + L ++L+DMY+K G ++ ++RVFD M +++ ++TS+ID
Sbjct: 439 LQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLID 498
Query: 349 GYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKV 408
GYG+ G + AL F+ M G+ P+ VT ++ LSAC+H+ LV +G +F ME+ + +
Sbjct: 499 GYGRLGKGEVALAWFKDMD-RSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGI 557
Query: 409 KPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAAS 468
+ R+EHY+C+VDL RAG L++A + +P P+S + A LL +C +HGNT + + AA
Sbjct: 558 RLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAAD 617
Query: 469 ELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWVGADS 523
+L G Y+ L++ A W + ++ ++ + G+ K + + DS
Sbjct: 618 KLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDS 672
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 206/428 (48%), Gaps = 28/428 (6%)
Query: 25 NHDFVPHST--LLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNC 82
+H+FV +S+ LLS + + N P GQ +H+H + +G ++ + KL+ Y N
Sbjct: 78 SHEFVLYSSASLLSTCVGF--NEFVP--GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNL 133
Query: 83 LRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKA 142
L A+ + ++ +N +IG+Y++ + +ES+ + +R++ G + D FT+ ++KA
Sbjct: 134 LDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKA 193
Query: 143 STSTSGRNVAPLGDL--GRIVHVQILKADVDVEKDDV-LCTALTDSYVKNGRIAYARTVF 199
A L D GR+VH I +V + ++ +C AL Y + G++ AR +F
Sbjct: 194 --------CAALLDFAYGRVVHGSI---EVSSHRCNLYVCNALISMYKRFGKVDVARRLF 242
Query: 200 DVMSEKNVISSTSLISGYMNQ----GLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECA 255
D MSE++ +S ++I+ Y ++ FK + ++ V+ IV +N + G +
Sbjct: 243 DRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGN-Y 301
Query: 256 TRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGH--IKLGS 313
+L + M+ N R + + ACS + A + G+ ++++ F H + +
Sbjct: 302 IGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRN 361
Query: 314 ALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVV 373
+LI MYS+C + + VF + ++ +W S+I G+ N +E L ++M + G
Sbjct: 362 SLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLS-GFH 420
Query: 374 PNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWE 433
PN +T S L A G + G E + K + + +VD+ ++G + A
Sbjct: 421 PNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKR 480
Query: 434 FVMRMPER 441
M +R
Sbjct: 481 VFDSMRKR 488
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/475 (25%), Positives = 242/475 (50%), Gaps = 7/475 (1%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ +H I + N + L+ +Y + + AR++FD + ++ ++N +I Y
Sbjct: 203 GRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTS 262
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
+ ++ E+ L+ R+ +SG + T++ I +G + L + + + + V
Sbjct: 263 EEKLGEAFKLLDRMYLSGVEASIVTWNTI-AGGCLEAGNYIGALNCVVGMRNCNVRIGSV 321
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVIS-STSLISGYMNQGLFKDAECI 229
+ C+ + +K G++ + + ++ + SLI+ Y + A +
Sbjct: 322 AMINGLKACSHI--GALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIV 379
Query: 230 FQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAA 289
FQ+ + +N++I G++ S + +M F PN T ASI+ + V
Sbjct: 380 FQQVEANSLSTWNSIISGFAYNERSEETSF-LLKEMLLSGFHPNHITLASILPLFARVGN 438
Query: 290 FEVGQQVQSQLMKTPFFGH-IKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMID 348
+ G++ +++ + + L ++L+DMY+K G ++ ++RVFD M +++ ++TS+ID
Sbjct: 439 LQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLID 498
Query: 349 GYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKV 408
GYG+ G + AL F+ M G+ P+ VT ++ LSAC+H+ LV +G +F ME+ + +
Sbjct: 499 GYGRLGKGEVALAWFKDMD-RSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGI 557
Query: 409 KPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAAS 468
+ R+EHY+C+VDL RAG L++A + +P P+S + A LL +C +HGNT + + AA
Sbjct: 558 RLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAAD 617
Query: 469 ELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWVGADS 523
+L G Y+ L++ A W + ++ ++ + G+ K + + DS
Sbjct: 618 KLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDS 672
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 206/428 (48%), Gaps = 28/428 (6%)
Query: 25 NHDFVPHST--LLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNC 82
+H+FV +S+ LLS + + N P GQ +H+H + +G ++ + KL+ Y N
Sbjct: 78 SHEFVLYSSASLLSTCVGF--NEFVP--GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNL 133
Query: 83 LRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKA 142
L A+ + ++ +N +IG+Y++ + +ES+ + +R++ G + D FT+ ++KA
Sbjct: 134 LDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKA 193
Query: 143 STSTSGRNVAPLGDL--GRIVHVQILKADVDVEKDDV-LCTALTDSYVKNGRIAYARTVF 199
A L D GR+VH I +V + ++ +C AL Y + G++ AR +F
Sbjct: 194 --------CAALLDFAYGRVVHGSI---EVSSHRCNLYVCNALISMYKRFGKVDVARRLF 242
Query: 200 DVMSEKNVISSTSLISGYMNQ----GLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECA 255
D MSE++ +S ++I+ Y ++ FK + ++ V+ IV +N + G +
Sbjct: 243 DRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGN-Y 301
Query: 256 TRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGH--IKLGS 313
+L + M+ N R + + ACS + A + G+ ++++ F H + +
Sbjct: 302 IGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRN 361
Query: 314 ALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVV 373
+LI MYS+C + + VF + ++ +W S+I G+ N +E L ++M + G
Sbjct: 362 SLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLS-GFH 420
Query: 374 PNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWE 433
PN +T S L A G + G E + K + + +VD+ ++G + A
Sbjct: 421 PNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKR 480
Query: 434 FVMRMPER 441
M +R
Sbjct: 481 VFDSMRKR 488
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 138/477 (28%), Positives = 241/477 (50%), Gaps = 31/477 (6%)
Query: 51 GQTIHSHILKTGF--VPNTNISIKLLVLYLKCNCLRYARQVFDD--LRDKTLSAYNYMIG 106
G+ +H+ + +G P + +S L Y + A+++FD+ L +K + ++
Sbjct: 25 GKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLS 84
Query: 107 AYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQIL 166
++ + G + S+ L + ++D + + A L DLG +
Sbjct: 85 SFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVC--------AKLEDLGFAQQGHGV 136
Query: 167 KADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMN-QGLFKD 225
+ V +C AL D Y K G ++ + +F+ + EK+V+S T ++ + +GL +
Sbjct: 137 AVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERG 196
Query: 226 AECIFQKTVDKDIVVFNAMIEGYSKTSECATRS-LEVYIDMQ-RLNFRPNISTFASIIGA 283
E +F + +++ V + M+ GY TR LE+ +M R N T S++ A
Sbjct: 197 RE-VFHEMPERNAVAWTVMVAGYLGAG--FTREVLELLAEMVFRCGHGLNFVTLCSMLSA 253
Query: 284 CSMVAAFEVGQQVQSQLMKTPF-------FGHIKLGSALIDMYSKCGRVVDSRRVFDHMH 336
C+ VG+ V +K + + +G+AL+DMY+KCG + S VF M
Sbjct: 254 CAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMR 313
Query: 337 QKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGL 396
++NV +W ++ G +G +++F +M E V P+ +TF + LSAC+H+G+VD+G
Sbjct: 314 KRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE--VKPDDLTFTAVLSACSHSGIVDEGW 371
Query: 397 EIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMR-MPERPNSDVWAALLSSCR 455
F S+ Y ++P+++HYAC+VDLLGRAG + +A E +MR MP PN V +LL SC
Sbjct: 372 RCFHSLRF-YGLEPKVDHYACMVDLLGRAGLIEEA-EILMREMPVPPNEVVLGSLLGSCS 429
Query: 456 LHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISK 512
+HG E+A+ EL +++ G + +SN A + D LR +++RGI K
Sbjct: 430 VHGKVEIAERIKRELIQMSP-GNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRK 485
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 140/486 (28%), Positives = 237/486 (48%), Gaps = 70/486 (14%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLKCNC-----LRYARQVFDDLRDKTLSAYNYMIG 106
+ + SH L G ++ + +LL +C L +A Q+F + + +N +I
Sbjct: 20 KQLQSHFLTAGHFQSSFLRSRLLE---RCAISPFGDLSFAVQIFRYIPKPLTNDWNAIIR 76
Query: 107 AYLKQGQVEESLGLVRRLLVSGE------KLDGFTFSMILKASTSTSGRNVAPLGDLGRI 160
+ + R +L ++D T S LKA A
Sbjct: 77 GFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACAR------ALCSSAMDQ 130
Query: 161 VHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQ 220
+H QI + + D +LCT L D+Y KNG + A +FD M ++V S +LI+G
Sbjct: 131 LHCQINRRGLSA--DSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAG---- 184
Query: 221 GLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASI 280
++ G A+ ++E+Y M+ R + T +
Sbjct: 185 -----------------------LVSGNR-----ASEAMELYKRMETEGIRRSEVTVVAA 216
Query: 281 IGACSMVAAFEVGQQVQSQLMKTPFFGH----IKLGSALIDMYSKCGRVVDSRRVFDHMH 336
+GACS + + G+ + F G+ + + +A IDMYSKCG V + +VF+
Sbjct: 217 LGACSHLGDVKEGENI--------FHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFT 268
Query: 337 -QKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKG 395
+K+V +W +MI G+ +G ALE+F K++ + G+ P+ V++L+AL+AC HAGLV+ G
Sbjct: 269 GKKSVVTWNTMITGFAVHGEAHRALEIFDKLE-DNGIKPDDVSYLAALTACRHAGLVEYG 327
Query: 396 LEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCR 455
L +F +M + V+ M+HY CVVDLL RAGRL +A + + M P+ +W +LL +
Sbjct: 328 LSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASE 386
Query: 456 LHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTA 515
++ + EMA++A+ E+ ++ N G +V LSN AA +W V +R+ M+ + + K
Sbjct: 387 IYSDVEMAEIASREIKEMGVNN-DGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPG 445
Query: 516 CSWVGA 521
S++ A
Sbjct: 446 LSYIEA 451
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 127/481 (26%), Positives = 225/481 (46%), Gaps = 46/481 (9%)
Query: 76 LYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFT 135
+Y KC A +F + L ++N MI A+ + G ++ L + + VS F+
Sbjct: 438 MYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEV-VSEYSCSKFS 496
Query: 136 FSMILKASTSTS-------GRNV-APLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYV 187
S +L TS G++V L LG + + + +D ++
Sbjct: 497 LSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCA 556
Query: 188 KNGRIAYARTVFDVMSEK-----NVISSTSLISGYMNQGLFKDAECIFQKTV----DKDI 238
+G + F MS + ++I+ IS N GL C + + D
Sbjct: 557 SSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDT 616
Query: 239 VVFNAMIEGYSKTSE--------------------CATRSL-------EVYIDMQRLNFR 271
+ N +I Y + + C +L EV+ + L
Sbjct: 617 QLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLE 676
Query: 272 PNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRV 331
PN TF ++ A + + + G Q L++ F + + +AL+DMYS CG + +V
Sbjct: 677 PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKV 736
Query: 332 FDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGL 391
F + ++ +W S+I +G +G ++A+ELF+++ + PN +F+S LSAC+H+G
Sbjct: 737 FRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGF 796
Query: 392 VDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALL 451
+D+GL ++ ME ++ VKP EH +VD+LGRAG+L +A+EF+ + E + VW ALL
Sbjct: 797 IDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALL 856
Query: 452 SSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGIS 511
S+C HG+T++ K A LF++ + Y++L+NT W+ LR+++++ +
Sbjct: 857 SACNYHGDTKLGKEVAEVLFEMEPD-NASYYISLANTYVGLGGWEEAVRLRKMVEDNALK 915
Query: 512 K 512
K
Sbjct: 916 K 916
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/512 (23%), Positives = 214/512 (41%), Gaps = 69/512 (13%)
Query: 7 RPFFSSRALFSPHQPFLQN-HDFVPHST---------LLSNTLQYYINSDTPSSGQTIHS 56
R F SS + SP P + N D +P L + L+ ++ + +++H
Sbjct: 54 RHFTSS--VLSPVTPIVHNLFDELPERENRTMESSFMFLRDVLRSFMMRTETETPRSVHC 111
Query: 57 HILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEE 116
LK G + + S KLL Y + L + +FD+L++K + +N MI A + G+
Sbjct: 112 FALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIA 171
Query: 117 SLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDD 176
++GL ++ G + D T + A +S + + L + + D
Sbjct: 172 AVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSM--------LHCLAIETGLVGDS 223
Query: 177 VLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDK 236
LC AL + Y K ++ AEC+F +
Sbjct: 224 SLCNALMNLYAKGENLS-------------------------------SAECVFTHMEHR 252
Query: 237 DIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQV 296
DIV +N ++ +SL+ + M + TF+ +I ACS + +G+ +
Sbjct: 253 DIVSWNTIMTKCLANGH-PRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESL 311
Query: 297 QSQLMKTPFF--GHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNG 354
++K+ + H+ +G+++I MYSKCG + VF+ + ++V S ++++G+ NG
Sbjct: 312 HGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANG 371
Query: 355 FPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEH 414
+EA + +MQ + P+ T +S S C +G + + Y V+ M+
Sbjct: 372 MFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAV-----HGYTVRMEMQS 426
Query: 415 YA-----CVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASE 469
A V+D+ G+ G QA E + + + W +++S+ +G T AK
Sbjct: 427 RALEVINSVIDMYGKCGLTTQA-ELLFKTTTHRDLVSWNSMISAFSQNGFTHKAK----N 481
Query: 470 LFKLNANGRPGAYVALSNTLAAAEKWDSVSEL 501
LFK + + +LS LA DS L
Sbjct: 482 LFKEVVSEYSCSKFSLSTVLAILTSCDSSDSL 513
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/485 (21%), Positives = 198/485 (40%), Gaps = 86/485 (17%)
Query: 51 GQTIHSHILKTGFVPNTNISI--KLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAY 108
G+++H ++K+G+ P ++S+ ++ +Y KC A VF++L + + + N ++ +
Sbjct: 308 GESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGF 367
Query: 109 LKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDL-----GRIVHV 163
G EE+ G++ ++ + +D ++ +T + GDL GR VH
Sbjct: 368 AANGMFEEAFGILNQM----QSVDK------IQPDIATVVSITSICGDLSFSREGRAVHG 417
Query: 164 QILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQG-- 221
++ ++ +V+ ++ D Y K G A +F + ++++S S+IS + G
Sbjct: 418 YTVRMEMQSRALEVI-NSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFT 476
Query: 222 -----LFKDA---------------------------------ECIFQKTVD-------- 235
LFK+ C QK D
Sbjct: 477 HKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRL 536
Query: 236 ------KDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLN-FRPNISTFASIIGACSMVA 288
+D+ +N++I G + + SL + M R R ++ T I A +
Sbjct: 537 ETMSETRDLTSWNSVISGCASSGH-HLESLRAFQAMSREGKIRHDLITLLGTISASGNLG 595
Query: 289 AFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMID 348
G+ +K+ +L + LI MY +C + + +VF + N+ SW +I
Sbjct: 596 LVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVIS 655
Query: 349 GYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIF-QSMENEYK 407
+N E +LF+ +++E PN +TF+ LSA G G++ + ++
Sbjct: 656 ALSQNKAGREVFQLFRNLKLE----PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQ 711
Query: 408 VKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAA 467
P + A +VD+ G L + V R + W +++S+ HG E A
Sbjct: 712 ANPFVS--AALVDMYSSCGMLETGMK-VFRNSGVNSISAWNSVISAHGFHGMGE----KA 764
Query: 468 SELFK 472
ELFK
Sbjct: 765 MELFK 769
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 188 bits (478), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 124/463 (26%), Positives = 228/463 (49%), Gaps = 42/463 (9%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ IH+H++ GFV ++ L +Y +C ++ +F+++ ++ + ++ +I AY +
Sbjct: 228 GKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKR 287
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
GQ +++ ++ S + TF+ + A S L R+V + L +V
Sbjct: 288 IGQEVKAVETFIKMRNSQVPPNEQTFASMFSACAS-----------LSRLVWGEQLHCNV 336
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
L L DS + S S++ Y G A +F
Sbjct: 337 -------LSLGLNDS---------------------LSVSNSMMKMYSTCGNLVSASVLF 368
Query: 231 QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAF 290
Q +DI+ ++ +I GY + + + M++ +P AS++ +A
Sbjct: 369 QGMRCRDIISWSTIIGGYCQAG-FGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVI 427
Query: 291 EVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGY 350
E G+QV + + + + S+LI+MYSKCG + ++ +F + ++ S T+MI+GY
Sbjct: 428 EGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGY 487
Query: 351 GKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKP 410
++G EA++LF+K ++ G P+ VTF+S L+AC H+G +D G F M+ Y ++P
Sbjct: 488 AEHGKSKEAIDLFEK-SLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRP 546
Query: 411 RMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASEL 470
EHY C+VDLL RAGRL+ A + + M + + VW LL +C+ G+ E + AA +
Sbjct: 547 AKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERI 606
Query: 471 FKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKD 513
+L+ A V L+N ++ + + +R+ MK +G+ K+
Sbjct: 607 LELDPTC-ATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKE 648
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 172/376 (45%), Gaps = 45/376 (11%)
Query: 25 NHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLR 84
+H P +++LS L+ S + G+++H++ +KT + + + LL +Y + +
Sbjct: 101 DHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKID 160
Query: 85 YARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKAST 144
+ +VF ++ + + +I + G+ +E L + S E D +TF++ LKA
Sbjct: 161 KSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACA 220
Query: 145 STSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTA--LTDSYVKNGRIAYARTVFDVM 202
R V G+ +H ++ LC A L Y + G + +F+ M
Sbjct: 221 GL--RQV----KYGKAIHTHVIVRGFVT----TLCVANSLATMYTECGEMQDGLCLFENM 270
Query: 203 SEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVY 262
SE++V+S TSLI Y K + +++ +++E +
Sbjct: 271 SERDVVSWTSLIVAY--------------KRIGQEV------------------KAVETF 298
Query: 263 IDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKC 322
I M+ PN TFAS+ AC+ ++ G+Q+ ++ + + ++++ MYS C
Sbjct: 299 IKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTC 358
Query: 323 GRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSA 382
G +V + +F M +++ SW+++I GY + GF +E + F M+ + G P S
Sbjct: 359 GNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMR-QSGTKPTDFALASL 417
Query: 383 LSACAHAGLVDKGLEI 398
LS + +++ G ++
Sbjct: 418 LSVSGNMAVIEGGRQV 433
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 128/307 (41%), Gaps = 72/307 (23%)
Query: 185 SYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAM 244
S + G + AR VFD M +++S TS+I Y + D+ +++F+AM
Sbjct: 49 SLINAGNLRAARQVFDKMPHGDIVSWTSIIKRY-----------VTANNSDEALILFSAM 97
Query: 245 IEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTP 304
R ++ + P+ S + ++ AC + G+ + + +KT
Sbjct: 98 ------------RVVDHAVS-------PDTSVLSVVLKACGQSSNIAYGESLHAYAVKTS 138
Query: 305 FFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQ 364
+ +GS+L+DMY + G++ S RVF M +N +WT++I G G E L F
Sbjct: 139 LLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFS 198
Query: 365 KM-----------------------QIEYG-------VVPNFVTFLSALSACA----HAG 390
+M Q++YG +V FVT L ++ A G
Sbjct: 199 EMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECG 258
Query: 391 LVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPER---PNSDVW 447
+ GL +F++M V + ++ R G+ +A E ++M PN +
Sbjct: 259 EMQDGLCLFENMSERDVVS-----WTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTF 313
Query: 448 AALLSSC 454
A++ S+C
Sbjct: 314 ASMFSAC 320
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 85/211 (40%), Gaps = 25/211 (11%)
Query: 30 PHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQV 89
P L++ L N G+ +H+ L G N+ + L+ +Y KC ++ A +
Sbjct: 409 PTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMI 468
Query: 90 FDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTS-- 147
F + + + MI Y + G+ +E++ L + L G + D TF +L A T +
Sbjct: 469 FGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQL 528
Query: 148 -----------------------GRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTD 184
G V L GR+ + + ++ +KDDV+ T L
Sbjct: 529 DLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLI 588
Query: 185 SYVKNGRIAYARTVFDVMSEKNVISSTSLIS 215
+ G I R + + E + +T+L++
Sbjct: 589 ACKAKGDIERGRRAAERILELDPTCATALVT 619
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 131/472 (27%), Positives = 229/472 (48%), Gaps = 46/472 (9%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLK--CNCLRYARQVFDDL-RDKTLSAYNYMIGAY 108
+ IHSH++ G + +I LL L +A+ +FD D + S +NY+I +
Sbjct: 22 RKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLIRGF 81
Query: 109 LKQGQVEESLGLVRRLLVSG-EKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILK 167
S+ R+L+S + D FTF+ LK+ RI
Sbjct: 82 SNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCE--------------RI------- 120
Query: 168 ADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAE 227
K C + S +++G + + I +TSL+ Y G + A
Sbjct: 121 ------KSIPKCLEIHGSVIRSGFL------------DDAIVATSLVRCYSANGSVEIAS 162
Query: 228 CIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMV 287
+F + +D+V +N MI +S ++L +Y M + T +++ +C+ V
Sbjct: 163 KVFDEMPVRDLVSWNVMICCFSHVG-LHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHV 221
Query: 288 AAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMI 347
+A +G + + + +ALIDMY+KCG + ++ VF+ M +++V +W SMI
Sbjct: 222 SALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMI 281
Query: 348 DGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYK 407
GYG +G EA+ F+KM + GV PN +TFL L C+H GLV +G+E F+ M +++
Sbjct: 282 IGYGVHGHGVEAISFFRKM-VASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFH 340
Query: 408 VKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAA 467
+ P ++HY C+VDL GRAG+L + E + + +W LL SC++H N E+ ++A
Sbjct: 341 LTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAM 400
Query: 468 SELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
+L +L A G YV +++ +AA + + +R++++ + SW+
Sbjct: 401 KKLVQLEAFN-AGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWI 451
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 204/387 (52%), Gaps = 14/387 (3%)
Query: 131 LDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNG 190
D FT+ +LKAS++ L + + L + E + TAL Y+ G
Sbjct: 119 FDSFTYLFLLKASSNPR------FPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGG 172
Query: 191 RIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSK 250
+ A VFD M E+N ++ +I+G N G F+ A C +K ++ +V + +I+GY++
Sbjct: 173 NMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYAR 232
Query: 251 TSECATRSLEVYIDMQRLN-FRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFG-H 308
+ ++ ++ M + +PN T +I+ A + ++ V + + K F
Sbjct: 233 VDK-PKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCD 291
Query: 309 IKLGSALIDMYSKCGRVVDSRRVFDHMH--QKNVFSWTSMIDGYGKNGFPDEALELFQKM 366
I++ ++LID Y+KCG + + + F + +KN+ SWT+MI + +G EA+ +F+ M
Sbjct: 292 IRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDM 351
Query: 367 QIEYGVVPNFVTFLSALSACAHAGLVDKG-LEIFQSMENEYKVKPRMEHYACVVDLLGRA 425
+ G+ PN VT +S L+AC+H GL ++ LE F +M NEYK+ P ++HY C+VD+L R
Sbjct: 352 E-RLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRK 410
Query: 426 GRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVAL 485
GRL +A + + +P + VW LL +C ++ + E+A+ +L +L G YV +
Sbjct: 411 GRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELE-RSHGGDYVLM 469
Query: 486 SNTLAAAEKWDSVSELREVMKERGISK 512
SN ++ R+ M RG++K
Sbjct: 470 SNIFCGTGRFLDAQRFRKQMDVRGVAK 496
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 185 bits (470), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 123/393 (31%), Positives = 202/393 (51%), Gaps = 10/393 (2%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQ 111
+ IH+ I+K + + +L+ + +YA VF+ L+ + +N MI +
Sbjct: 37 KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVN 96
Query: 112 GQVEESLGLVRRLLVSGE-KLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
+ E+L L +++S + + D FTF ++KA ++S LG VH +KA
Sbjct: 97 HKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIR------LGTQVHGLAIKAGF 150
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
D L D Y K G+ R VFD M ++++S T+++ G ++ AE +F
Sbjct: 151 --FNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVF 208
Query: 231 QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAF 290
+ +++V + AMI Y K + +++ MQ + +PN T +++ A + + +
Sbjct: 209 NQMPMRNVVSWTAMITAYVKNRR-PDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSL 267
Query: 291 EVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGY 350
+G+ V K F LG+ALIDMYSKCG + D+R+VFD M K++ +W SMI
Sbjct: 268 SMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSL 327
Query: 351 GKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKP 410
G +G +EAL LF++M+ E V P+ +TF+ LSACA+ G V GL F M Y + P
Sbjct: 328 GVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISP 387
Query: 411 RMEHYACVVDLLGRAGRLNQAWEFVMRMPERPN 443
EH AC++ LL +A + +A V M P+
Sbjct: 388 IREHNACMIQLLEQALEVEKASNLVESMDSDPD 420
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Query: 23 LQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNC 82
+Q D P+ + N LQ + S G+ +H + K GFV + + L+ +Y KC
Sbjct: 242 MQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGS 301
Query: 83 LRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGE-KLDGFTFSMILK 141
L+ AR+VFD ++ K+L+ +N MI + G EE+L L + + D TF +L
Sbjct: 302 LQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLS 361
Query: 142 ASTST 146
A +T
Sbjct: 362 ACANT 366
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 185 bits (469), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 140/520 (26%), Positives = 248/520 (47%), Gaps = 68/520 (13%)
Query: 22 FLQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFV--PNTNISIKLLVLYLK 79
Q V ST L L+ I+S + G+ +H+ + G P+ + KLL +Y K
Sbjct: 72 LFQQGSKVKRSTYLK-LLESCIDSGSIHLGRILHA---RFGLFTEPDVFVETKLLSMYAK 127
Query: 80 CNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMI 139
C C+ AR+VFD +R++ L ++ MIGAY ++ + E L R ++ G D F F I
Sbjct: 128 CGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKI 187
Query: 140 LKASTSTSGRNVAPLGDL--GRIVHVQILKADVDVEKDDVLCTALTDS----YVKNGRIA 193
L+ A GD+ G+++H ++K + C +++S Y K G +
Sbjct: 188 LQG--------CANCGDVEAGKVIHSVVIKLGMSS------CLRVSNSILAVYAKCGELD 233
Query: 194 YARTVFDVMSEKNVISSTSLISGYMNQGLFKDA----ECIFQKTVDKDIVVFNAMIEGYS 249
+A F M E++VI+ S++ Y G ++A + + ++ + +V +N +I GY+
Sbjct: 234 FATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYN 293
Query: 250 KTSECAT-----RSLEVY-------------------------IDMQRLNFR----PNIS 275
+ +C + +E + +DM R F PN
Sbjct: 294 QLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAV 353
Query: 276 TFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHM 335
T S + ACS + G +V S +K F + +G++L+DMYSKCG++ D+R+VFD +
Sbjct: 354 TIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSV 413
Query: 336 HQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKG 395
K+V++W SMI GY + G+ +A ELF +MQ + + PN +T+ + +S G +
Sbjct: 414 KNKDVYTWNSMITGYCQAGYCGKAYELFTRMQ-DANLRPNIITWNTMISGYIKNGDEGEA 472
Query: 396 LEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPER---PNSDVWAALLS 452
+++FQ ME + KV+ + ++ + G+ ++A E +M PNS +LL
Sbjct: 473 MDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLP 532
Query: 453 SCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAA 492
+C +M + + + N + AL++T A +
Sbjct: 533 ACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKS 572
Score = 185 bits (469), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 141/546 (25%), Positives = 241/546 (44%), Gaps = 102/546 (18%)
Query: 29 VPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQ 88
+P L LQ N +G+ IHS ++K G +S +L +Y KC L +A +
Sbjct: 178 LPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATK 237
Query: 89 VFDDLRDKTLSAYN-----------------------------------YMIGAYLKQGQ 113
F +R++ + A+N +IG Y + G+
Sbjct: 238 FFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGK 297
Query: 114 VEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGR-------------NVAP-----LG 155
+ ++ L++++ G D FT++ ++ R V P +
Sbjct: 298 CDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMS 357
Query: 156 DLGRIVHVQILKADVDVEK--------DDVLC-TALTDSYVKNGRIAYARTVFDVMSEKN 206
+ ++++ +V DDVL +L D Y K G++ AR VFD + K+
Sbjct: 358 AVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKD 417
Query: 207 VISSTSLISGYMNQGLFKDAECIFQKTVDKD----IVVFNAMIEGYSKTSE--------- 253
V + S+I+GY G A +F + D + I+ +N MI GY K +
Sbjct: 418 VYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQ 477
Query: 254 -----------CAT---------------RSLEVYIDMQRLNFRPNISTFASIIGACSMV 287
AT +LE++ MQ F PN T S++ AC+ +
Sbjct: 478 RMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANL 537
Query: 288 AAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMI 347
++ +++ +++ + +AL D Y+K G + SR +F M K++ +W S+I
Sbjct: 538 LGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLI 597
Query: 348 DGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYK 407
GY +G AL LF +M+ + G+ PN T S + A G VD+G ++F S+ N+Y
Sbjct: 598 GGYVLHGSYGPALALFNQMKTQ-GITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYH 656
Query: 408 VKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAA 467
+ P +EH + +V L GRA RL +A +F+ M + + +W + L+ CR+HG+ +MA AA
Sbjct: 657 IIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAA 716
Query: 468 SELFKL 473
LF L
Sbjct: 717 ENLFSL 722
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/455 (27%), Positives = 211/455 (46%), Gaps = 51/455 (11%)
Query: 72 KLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKL 131
+++ Y+ + A ++F ++ +K YN ++ + + G ++L L +L G +L
Sbjct: 356 EMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVEL 415
Query: 132 DGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGR 191
F+ + + A S + V+ +H +K + + TAL D + R
Sbjct: 416 TDFSLTSAVDACGLVSEKKVS------EQIHGFCIKFGTAF--NPCIQTALLDMCTRCER 467
Query: 192 IAYARTVFDVMSEKNVISS---TSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGY 248
+A A +FD N+ SS TS+I GY GL A +F +T+
Sbjct: 468 MADAEEMFD-QWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTL-------------- 512
Query: 249 SKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGH 308
C + +++D L I+ C + E+G Q+ +K +F
Sbjct: 513 -----CEQK---LFLDEVSLTL---------ILAVCGTLGFREMGYQIHCYALKAGYFSD 555
Query: 309 IKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGY--GKNGFPDEALELFQKM 366
I LG++LI MY+KC D+ ++F+ M + +V SW S+I Y +NG DEAL L+ +M
Sbjct: 556 ISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNG--DEALALWSRM 613
Query: 367 QIEYGVVPNFVTFLSALSACAH--AGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGR 424
E + P+ +T +SA + + + ++F SM+ Y ++P EHY V +LG
Sbjct: 614 N-EKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGH 672
Query: 425 AGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVA 484
G L +A + + MP +P V ALL SCR+H NT +AK A + P Y+
Sbjct: 673 WGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPET-PSEYIL 731
Query: 485 LSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
SN +A+ W +RE M+ERG K A SW+
Sbjct: 732 KSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWI 766
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 186/362 (51%), Gaps = 28/362 (7%)
Query: 49 SSGQTIHSHILKTGFVPNTNISIKLLVLYLK-----CNCLRYARQVFDDLRDKTLSAYNY 103
S G IH I+K+GF+ + +S L+ LY K C+ + ++FD++ + ++++N
Sbjct: 198 SLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVL---KLFDEIPQRDVASWNT 254
Query: 104 MIGAYLKQGQVEESLGLVRRL-LVSGEKLDGFTFSMILKASTSTS----GRNVAPLGDLG 158
++ + +K+G+ ++ L + V G +D FT S +L + T +S GR + G
Sbjct: 255 VVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELH-----G 309
Query: 159 RIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYM 218
R + + +++ ++ V AL Y K + +++++M ++ ++ T +I+ YM
Sbjct: 310 RAIRIGLMQ-ELSVN------NALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYM 362
Query: 219 NQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFA 278
+ G+ A IF +K+ + +NA++ G+ + ++L+++ DM + +
Sbjct: 363 SFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGH-GLKALKLFTDMLQRGVELTDFSLT 421
Query: 279 SIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHM--H 336
S + AC +V+ +V +Q+ +K + + +AL+DM ++C R+ D+ +FD +
Sbjct: 422 SAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSN 481
Query: 337 QKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGL 396
+ + TS+I GY +NG PD+A+ LF + E + + V+ L+ C G + G
Sbjct: 482 LDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGY 541
Query: 397 EI 398
+I
Sbjct: 542 QI 543
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 107/206 (51%), Gaps = 10/206 (4%)
Query: 199 FDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRS 258
F + E+ +LIS Y+ G ++A +F +V + A+I G+S+ + +
Sbjct: 106 FLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLN-LEIEA 164
Query: 259 LEVYIDMQRLNF-RPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALID 317
L+V+ M++ +PN TF +I+ AC V+ F +G Q+ ++K+ F + + ++L+
Sbjct: 165 LKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMS 224
Query: 318 MYSK-----CGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGV 372
+Y K C V+ ++FD + Q++V SW +++ K G +A +LF +M G
Sbjct: 225 LYDKDSGSSCDDVL---KLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGF 281
Query: 373 VPNFVTFLSALSACAHAGLVDKGLEI 398
+ T + LS+C + ++ +G E+
Sbjct: 282 GVDSFTLSTLLSSCTDSSVLLRGREL 307
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/353 (20%), Positives = 150/353 (42%), Gaps = 46/353 (13%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQ 111
+ +H+ LK T + L+ YLK R A VF L T+ +Y +I + +
Sbjct: 100 KAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRL 158
Query: 112 GQVEESLGLVRRLLVSG-EKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV 170
E+L + R+ +G + + +TF IL A S + LG +H I+K+
Sbjct: 159 NLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFS------LGIQIHGLIVKSGF 212
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIF 230
L +V N ++ + +K+ SS D +F
Sbjct: 213 -----------LNSVFVSNSLMS--------LYDKDSGSSCD------------DVLKLF 241
Query: 231 QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLN-FRPNISTFASIIGACSMVAA 289
+ +D+ +N ++ K + + ++ +++ +M R+ F + T ++++ +C+ +
Sbjct: 242 DEIPQRDVASWNTVVSSLVKEGK-SHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSV 300
Query: 290 FEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDG 349
G+++ + ++ + + +ALI YSK + +++ M ++ ++T MI
Sbjct: 301 LLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITA 360
Query: 350 YGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSM 402
Y G D A+E+F + + N +T+ + ++ G K L++F M
Sbjct: 361 YMSFGMVDSAVEIFANVTEK-----NTITYNALMAGFCRNGHGLKALKLFTDM 408
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 117/275 (42%), Gaps = 20/275 (7%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLS--AYNYMIGAYL 109
+ IH +K G N I LL + +C + A ++FD S A +IG Y
Sbjct: 437 EQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYA 496
Query: 110 KQGQVEESLGLVRRLLVSGEK-LDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKA 168
+ G ++++ L R L + LD + ++IL + R ++G +H LKA
Sbjct: 497 RNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFR------EMGYQIHCYALKA 550
Query: 169 DVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAEC 228
D L +L Y K A +F+ M E +VIS SLIS Y+ Q +A
Sbjct: 551 GY--FSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALA 608
Query: 229 IF----QKTVDKDIVVFNAMIEGYSKTSECATRSL-EVYIDMQRL-NFRPNISTFASIIG 282
++ +K + DI+ +I + T S ++++ M+ + + P + + +
Sbjct: 609 LWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFV- 667
Query: 283 ACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALID 317
++ + + ++ + + P + + AL+D
Sbjct: 668 --RVLGHWGLLEEAEDTINSMPVQPEVSVLRALLD 700
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 54/107 (50%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G IH + LK G+ + ++ L+ +Y KC A ++F+ +R+ + ++N +I Y+
Sbjct: 540 GYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYIL 599
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDL 157
Q +E+L L R+ K D T ++++ A T ++ DL
Sbjct: 600 QRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDL 646
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 210/426 (49%), Gaps = 22/426 (5%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
G+ IH+ +K V +T +S + +Y+KC+ L AR+VFD R K L ++ + Y
Sbjct: 282 GKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAM 341
Query: 111 QGQVEESLGLV-----RRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQI 165
G E+ L R ++ L G+ + + + ++ + V I
Sbjct: 342 SGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWI 401
Query: 166 LKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKD 225
L +C+ ++D V+ G+ A+ ++ + NVI + +L+ Y G +
Sbjct: 402 LN----------VCSGISD--VQMGKQAHG-FIYRHGYDTNVIVANALLDMYGKCGTLQS 448
Query: 226 AECIFQKTVD-KDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGAC 284
A F++ + +D V +NA++ G ++ + ++L + MQ + +P+ T A+++ C
Sbjct: 449 ANIWFRQMSELRDEVSWNALLTGVARVGR-SEQALSFFEGMQ-VEAKPSKYTLATLLAGC 506
Query: 285 SMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWT 344
+ + A +G+ + L++ + + + A++DMYSKC + VF +++ W
Sbjct: 507 ANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWN 566
Query: 345 SMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMEN 404
S+I G +NG E ELF ++ E GV P+ VTFL L AC G V+ G + F SM
Sbjct: 567 SIIRGCCRNGRSKEVFELFMLLENE-GVKPDHVTFLGILQACIREGHVELGFQYFSSMST 625
Query: 405 EYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAK 464
+Y + P++EHY C+++L + G L+Q EF++ MP P + + +C+ + +++
Sbjct: 626 KYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGA 685
Query: 465 LAASEL 470
AA L
Sbjct: 686 WAAKRL 691
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 218/427 (51%), Gaps = 20/427 (4%)
Query: 52 QTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQ 111
+ +H ++K G+ N ++ ++ +Y KC + AR+VFD++ + + ++N ++ YL+
Sbjct: 182 RQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEM 241
Query: 112 GQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVD 171
G +E++ + ++L + T S ++ A + R++A ++G+++H +K +
Sbjct: 242 GFNDEAVVMFFKMLELNVRPLNHTVSSVMLACS----RSLAL--EVGKVIHAIAVK--LS 293
Query: 172 VEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQ 231
V D V+ T++ D YVK R+ AR VFD K++ S TS +SGY GL ++A +F
Sbjct: 294 VVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFD 353
Query: 232 KTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFE 291
+++IV +NAM+ GY E +L+ M++ + T I+ CS ++ +
Sbjct: 354 LMPERNIVSWNAMLGGYVHAHE-WDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQ 412
Query: 292 VGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQ-KNVFSWTSMIDGY 350
+G+Q + + + ++ + +AL+DMY KCG + + F M + ++ SW +++ G
Sbjct: 413 MGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGV 472
Query: 351 GKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSM-ENEYKVK 409
+ G ++AL F+ MQ+E P+ T + L+ CA+ ++ G I + + YK+
Sbjct: 473 ARVGRSEQALSFFEGMQVE--AKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKID 530
Query: 410 PRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASE 469
+ +VD+ + + A E R + +W +++ C +G ++ E
Sbjct: 531 VVIR--GAMVDMYSKCRCFDYAIEVFKEAATR-DLILWNSIIRGCCRNGRSK----EVFE 583
Query: 470 LFKLNAN 476
LF L N
Sbjct: 584 LFMLLEN 590
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 162/359 (45%), Gaps = 53/359 (14%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
+ + SH++ +P + + + Y KC C+ AR++F+++ ++ ++N +I A +
Sbjct: 80 ARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQ 139
Query: 111 QGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILK--- 167
G +E + RR+ G + +F+ +LK+ L R +H ++K
Sbjct: 140 NGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLR------LLRQLHCAVVKYGY 193
Query: 168 -ADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDA 226
+VD+E T++ D Y K ++ AR VFD + + +S ++ Y+ G
Sbjct: 194 SGNVDLE------TSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGF---- 243
Query: 227 ECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSM 286
D+ +V+F M+E LN RP T +S++ ACS
Sbjct: 244 -------NDEAVVMFFKMLE---------------------LNVRPLNHTVSSVMLACSR 275
Query: 287 VAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSM 346
A EVG+ + + +K + +++ DMY KC R+ +RRVFD K++ SWTS
Sbjct: 276 SLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSA 335
Query: 347 IDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENE 405
+ GY +G EA ELF M N V++ + L HA D+ L+ M E
Sbjct: 336 MSGYAMSGLTREARELFDLMPER-----NIVSWNAMLGGYVHAHEWDEALDFLTLMRQE 389
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 137/294 (46%), Gaps = 8/294 (2%)
Query: 214 ISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPN 273
I Y G DA +F++ ++D +NA+I ++ + ++ M R R
Sbjct: 103 IEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNG-VSDEVFRMFRRMNRDGVRAT 161
Query: 274 ISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFD 333
++FA ++ +C ++ + +Q+ ++K + G++ L ++++D+Y KC + D+RRVFD
Sbjct: 162 ETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFD 221
Query: 334 HMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVD 393
+ + SW ++ Y + GF DEA+ +F KM +E V P T S + AC+ + ++
Sbjct: 222 EIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKM-LELNVRPLNHTVSSVMLACSRSLALE 280
Query: 394 KGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSS 453
G ++ ++ + V V D+ + RL A V + W + +S
Sbjct: 281 VG-KVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESA-RRVFDQTRSKDLKSWTSAMSG 338
Query: 454 CRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKE 507
+ G T A+ ELF L ++ A+ A +WD + +M++
Sbjct: 339 YAMSGLTREAR----ELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQ 388
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 277 FASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMH 336
+ + +CS A ++VQS L+ I L + I+ Y KCG V D+R +F+ M
Sbjct: 64 YERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMP 123
Query: 337 QKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACA 387
+++ SW ++I +NG DE +F++M + GV +F L +C
Sbjct: 124 ERDGGSWNAVITACAQNGVSDEVFRMFRRMNRD-GVRATETSFAGVLKSCG 173
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%)
Query: 30 PHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQV 89
P L+ L N + G+ IH +++ G+ + I ++ +Y KC C YA +V
Sbjct: 494 PSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEV 553
Query: 90 FDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKA 142
F + + L +N +I + G+ +E L L G K D TF IL+A
Sbjct: 554 FKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQA 606
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/470 (25%), Positives = 228/470 (48%), Gaps = 40/470 (8%)
Query: 51 GQTIHSHILKTGF-VPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYL 109
G+ +HS ++K+G+ + N ++ L+ Y C L + + F+ + +K + ++N ++
Sbjct: 232 GKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCA 291
Query: 110 KQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKAD 169
G V +SL L ++ G++ F L + S G+ +H +LK
Sbjct: 292 DYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQS------GKQIHCYVLKMG 345
Query: 170 VDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECI 229
DV V +AL D Y K I + ++ + N+ SL++ M+ G+ KD
Sbjct: 346 FDVSSLHVQ-SALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDI--- 401
Query: 230 FQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAA 289
I +F MI+ + E ++ ++ L+ + + +C++V
Sbjct: 402 --------IEMFGLMIDEGTGIDEVTLSTV-----LKALSL-----SLPESLHSCTLVHC 443
Query: 290 FEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDG 349
+ K+ + + + +LID Y+K G+ SR+VFD + N+F TS+I+G
Sbjct: 444 CAI---------KSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIING 494
Query: 350 YGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVK 409
Y +NG + +++ ++M ++P+ VT LS LS C+H+GLV++G IF S+E++Y +
Sbjct: 495 YARNGMGTDCVKMLREMD-RMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGIS 553
Query: 410 PRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASE 469
P + YAC+VDLLGRAG + +A +++ + W++LL SCR+H N + + AA
Sbjct: 554 PGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEV 613
Query: 470 LFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWV 519
L L Y+ +S ++ ++RE+ R + ++ S V
Sbjct: 614 LMNLEPENF-AVYIQVSKFYFEIGDFEISRQIREIAASRELMREIGYSSV 662
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 131/283 (46%), Gaps = 27/283 (9%)
Query: 192 IAYARTVFDVMSEKN----VISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEG 247
IA R F E+N V + I + G A F + +D+V +N +I G
Sbjct: 27 IATPRMDFSSFLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISG 86
Query: 248 YSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFG 307
S+ C+ R++E+Y +M R + STF S++ CS G QV +++ F
Sbjct: 87 NSRYG-CSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGC 145
Query: 308 HIKLGSALIDMYSKCGRVVD-SRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKM 366
++ + SAL+ +Y+ C R+VD + ++FD M +N+ ++ + + G E++ +M
Sbjct: 146 NMFVRSALVGLYA-CLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRM 204
Query: 367 QIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQ-------SMENEYKVKPRMEHYACVV 419
++E GV N +T+ + C+H LV +G ++ ++ N + +++Y+
Sbjct: 205 ELE-GVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACG 263
Query: 420 DLLGRAGRLNQAWEFVMRMPERPNSDV--WAALLSSCRLHGNT 460
DL G N P DV W +++S C +G+
Sbjct: 264 DLSGSMRSFNAV----------PEKDVISWNSIVSVCADYGSV 296
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 149/339 (43%), Gaps = 47/339 (13%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRY---ARQVFDDLRDKTLSAYNYMIGA 107
G +H ++ GF N + L+ LY CLR A ++FD++ D+ L+ N ++
Sbjct: 131 GIQVHCRVISLGFGCNMFVRSALVGLY---ACLRLVDVALKLFDEMLDRNLAVCNLLLRC 187
Query: 108 YLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILK 167
+ + G+ + + R+ + G +G T+ +++ + R V G+ +H ++K
Sbjct: 188 FCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHD--RLVYE----GKQLHSLVVK 241
Query: 168 ADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAE 227
+ ++ + + L D Y G ++ + F+ + EK+VIS S++S + G D
Sbjct: 242 SGWNI-SNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLD-- 298
Query: 228 CIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMV 287
SL+++ MQ RP+I F S + CS
Sbjct: 299 ------------------------------SLDLFSKMQFWGKRPSIRPFMSFLNFCSRN 328
Query: 288 AAFEVGQQVQSQLMKTPF-FGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSM 346
+ + G+Q+ ++K F + + SALIDMY KC + +S ++ + N+ S+
Sbjct: 329 SDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSL 388
Query: 347 IDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSA 385
+ G + +E+F M I+ G + VT + L A
Sbjct: 389 MTSLMHCGITKDIIEMFGLM-IDEGTGIDEVTLSTVLKA 426
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 137/314 (43%), Gaps = 42/314 (13%)
Query: 86 ARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTS 145
A + FD++ + + YN +I + G ++ L ++ G + TF +L +
Sbjct: 65 AHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCS- 123
Query: 146 TSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEK 205
D++ C + G + R V +
Sbjct: 124 -----------------------------DELFC--------REGIQVHCR-VISLGFGC 145
Query: 206 NVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDM 265
N+ ++L+ Y L A +F + +D+++ V N ++ + +T E + R EVY+ M
Sbjct: 146 NMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGE-SKRLFEVYLRM 204
Query: 266 QRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPF-FGHIKLGSALIDMYSKCGR 324
+ N T+ +I CS G+Q+ S ++K+ + +I + + L+D YS CG
Sbjct: 205 ELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGD 264
Query: 325 VVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALS 384
+ S R F+ + +K+V SW S++ G ++L+LF KMQ +G P+ F+S L+
Sbjct: 265 LSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQF-WGKRPSIRPFMSFLN 323
Query: 385 ACAHAGLVDKGLEI 398
C+ + G +I
Sbjct: 324 FCSRNSDIQSGKQI 337
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 145/340 (42%), Gaps = 53/340 (15%)
Query: 15 LFSPHQPFLQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGF-VPNTNISIKL 73
LFS Q + + P + L+ + NSD SG+ IH ++LK GF V + ++ L
Sbjct: 302 LFSKMQFWGKRPSIRPFMSFLNFCSR---NSDI-QSGKQIHCYVLKMGFDVSSLHVQSAL 357
Query: 74 LVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDG 133
+ +Y KCN + + ++ L L N ++ + + G ++ + + ++ G +D
Sbjct: 358 IDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDE 417
Query: 134 FTFSMILKASTSTSGRNVAPLGDLGRIVHVQILK----ADVDVEKDDVLCTALTDSYVKN 189
T S +LKA + + ++ +VH +K ADV V +L D+Y K+
Sbjct: 418 VTLSTVLKALSLSLPESLHSC----TLVHCCAIKSGYAADVAVS------CSLIDAYTKS 467
Query: 190 GRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYS 249
G+ +R VFD + N+ TS+I+GY G+
Sbjct: 468 GQNEVSRKVFDELDTPNIFCLTSIINGYARNGM--------------------------- 500
Query: 250 KTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQL-MKTPFFGH 308
T +++ +M R+N P+ T S++ CS E G+ + L K
Sbjct: 501 -----GTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPG 555
Query: 309 IKLGSALIDMYSKCGRVVDSRRVFDHMH-QKNVFSWTSMI 347
KL + ++D+ + G V + R+ + +W+S++
Sbjct: 556 RKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLL 595
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 188/356 (52%), Gaps = 34/356 (9%)
Query: 77 YLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTF 136
+ K L AR+ FD + +K++ ++N M+ Y + G E++L L +L G + + T+
Sbjct: 208 FAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTW 267
Query: 137 SMILKAST----STSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRI 192
+++ A + + R++ L D R+ +K TAL D + K I
Sbjct: 268 VIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVK------------TALLDMHAKCRDI 315
Query: 193 AYARTVFDVM-SEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKT 251
AR +F+ + +++N+++ ++ISGY G A +F +++V +N++I GY+
Sbjct: 316 QSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHN 375
Query: 252 SECATRSLEVYIDMQRL-NFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIK 310
+ A ++E + DM + +P+ T S++ AC +A E+G + + K IK
Sbjct: 376 GQAAL-AIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRK----NQIK 430
Query: 311 LGSA----LIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKM 366
L + LI MY++ G + +++RVFD M +++V S+ ++ + NG E L L KM
Sbjct: 431 LNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKM 490
Query: 367 QIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLL 422
+ E G+ P+ VT+ S L+AC AGL+ +G IF+S+ N P +HYAC +DLL
Sbjct: 491 KDE-GIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN-----PLADHYAC-MDLL 539
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 180/434 (41%), Gaps = 92/434 (21%)
Query: 80 CNCLR----YARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFT 135
C LR Y R +FD + + N M + K + L L + G D F+
Sbjct: 49 CTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFS 108
Query: 136 FSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYA 195
F +++K++ G G + Q L + KD + + D YVK+ + A
Sbjct: 109 FPVVIKSA-----------GRFG--ILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESA 155
Query: 196 RTVFD-------------------------------VMSEKNVISSTSLISGYMNQGLFK 224
R VFD +M E +V+S T +I+G+ +
Sbjct: 156 RKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLE 215
Query: 225 DAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGAC 284
+A F + +K +V +NAM+ GY++ +L ++ DM RL RPN +T+ +I AC
Sbjct: 216 NARKYFDRMPEKSVVSWNAMLSGYAQNG-FTEDALRLFNDMLRLGVRPNETTWVIVISAC 274
Query: 285 SMVAAFEVGQQVQSQLMKTPFFGHIKLG----SALIDMYSKCGRVVDSRRV--------- 331
S F + L+K ++L +AL+DM++KC + +RR+
Sbjct: 275 S----FRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRN 330
Query: 332 -----------------------FDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQI 368
FD M ++NV SW S+I GY NG A+E F+ M I
Sbjct: 331 LVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDM-I 389
Query: 369 EYG-VVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGR 427
+YG P+ VT +S LSAC H ++ G I + ++K Y ++ + R G
Sbjct: 390 DYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKN-QIKLNDSGYRSLIFMYARGGN 448
Query: 428 LNQAWEFVMRMPER 441
L +A M ER
Sbjct: 449 LWEAKRVFDEMKER 462
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 179/373 (47%), Gaps = 42/373 (11%)
Query: 25 NHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLR 84
NH F+P+ + + L+ G+ +HS ++K + + L+ +Y KC +
Sbjct: 277 NHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEIS 336
Query: 85 YARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKAST 144
R+VFD + ++ + +I A+ ++G EE++ L R + + T IL+A
Sbjct: 337 DCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACG 396
Query: 145 STSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSE 204
S A L LG+ +H QI+K + E
Sbjct: 397 SVG----ALL--LGKELHAQIIKNSI---------------------------------E 417
Query: 205 KNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYID 264
KNV ++L+ Y G +DA + Q+ +D+V + AMI G S + +L+ +
Sbjct: 418 KNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGH-ESEALDFLKE 476
Query: 265 MQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGR 324
M + PN T++S + AC+ + +G+ + S K ++ +GSALI MY+KCG
Sbjct: 477 MIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGF 536
Query: 325 VVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALS 384
V ++ RVFD M +KN+ SW +MI GY +NGF EAL+L +M+ E V +++ F + LS
Sbjct: 537 VSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYI-FATILS 595
Query: 385 ACAHAGLVDKGLE 397
C L D+ +E
Sbjct: 596 TCGDIEL-DEAVE 607
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 213/465 (45%), Gaps = 55/465 (11%)
Query: 20 QPFLQNHDFVPHSTLLSNTLQYYINSDTPSS------GQTIHSHILKTGFVPNTNISIKL 73
+ F D+V H +N + + S G+ +H +++K G V N + L
Sbjct: 166 EAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVG-VGNLIVESSL 224
Query: 74 LVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDG 133
+ Y +C L A + FD + +K + ++ +I A ++G +++G+ +L +
Sbjct: 225 VYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNE 284
Query: 134 FTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLC-TALTDSYVKNGRI 192
FT ILKA + GR VH ++K + K DV T+L D Y K G I
Sbjct: 285 FTVCSILKACSEEKALR------FGRQVHSLVVKRMI---KTDVFVGTSLMDMYAKCGEI 335
Query: 193 AYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTS 252
+ R VFD MS +N ++ TS+I+ + +G ++A +F+
Sbjct: 336 SDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRI-------------------- 375
Query: 253 ECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLG 312
M+R + N T SI+ AC V A +G+++ +Q++K ++ +G
Sbjct: 376 ------------MKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIG 423
Query: 313 SALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGV 372
S L+ +Y KCG D+ V + ++V SWT+MI G G EAL+ ++M I+ GV
Sbjct: 424 STLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEM-IQEGV 482
Query: 373 VPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAW 432
PN T+ SAL ACA++ + G I + + + A ++ + + G +++A+
Sbjct: 483 EPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSA-LIHMYAKCGFVSEAF 541
Query: 433 EFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANG 477
MPE+ N W A++ +G + A ++++ A G
Sbjct: 542 RVFDSMPEK-NLVSWKAMIMGYARNG---FCREALKLMYRMEAEG 582
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 191/414 (46%), Gaps = 49/414 (11%)
Query: 83 LRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKA 142
L YAR+VFD + +K + MI YLK G +E+ L + G + FT +
Sbjct: 133 LVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR---FTNERMFVC 189
Query: 143 STSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVM 202
+ R +LGR VH ++K V + ++ ++L Y + G + A FD+M
Sbjct: 190 LLNLCSRRAEF--ELGRQVHGNMVKVGVG---NLIVESSLVYFYAQCGELTSALRAFDMM 244
Query: 203 SEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVY 262
EK D++ + A+I S+ +++ ++
Sbjct: 245 EEK-------------------------------DVISWTAVISACSRKGH-GIKAIGMF 272
Query: 263 IDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKC 322
I M F PN T SI+ ACS A G+QV S ++K + +G++L+DMY+KC
Sbjct: 273 IGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKC 332
Query: 323 GRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSA 382
G + D R+VFD M +N +WTS+I + + GF +EA+ LF+ M+ + ++ N +T +S
Sbjct: 333 GEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRH-LIANNLTVVSI 391
Query: 383 LSACAHAGLVDKGLEIF-QSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPER 441
L AC G + G E+ Q ++N ++ + + +V L + G A+ + ++P R
Sbjct: 392 LRACGSVGALLLGKELHAQIIKN--SIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSR 449
Query: 442 PNSDV--WAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAE 493
DV W A++S C G+ A E+ + P Y + A +E
Sbjct: 450 ---DVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSE 500
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 134/282 (47%), Gaps = 35/282 (12%)
Query: 182 LTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVF 241
L S V+ G + YAR VFD M EKN ++ T++I GY+ GL +A +F+ V I
Sbjct: 123 LISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFT 182
Query: 242 NAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLM 301
N +R+ F ++ CS A FE+G+QV ++
Sbjct: 183 N-----------------------ERM--------FVCLLNLCSRRAEFELGRQVHGNMV 211
Query: 302 KTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALE 361
K G++ + S+L+ Y++CG + + R FD M +K+V SWT++I + G +A+
Sbjct: 212 KVGV-GNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIG 270
Query: 362 LFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDL 421
+F M + + +PN T S L AC+ + G ++ S+ + +K + ++D+
Sbjct: 271 MFIGM-LNHWFLPNEFTVCSILKACSEEKALRFGRQV-HSLVVKRMIKTDVFVGTSLMDM 328
Query: 422 LGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMA 463
+ G ++ + M R N+ W +++++ G E A
Sbjct: 329 YAKCGEISDCRKVFDGMSNR-NTVTWTSIIAAHAREGFGEEA 369
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 5/152 (3%)
Query: 309 IKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQI 368
I G+ LI + G +V +R+VFD M +KN +WT+MIDGY K G DEA LF+ +
Sbjct: 117 IYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDY-V 175
Query: 369 EYGV-VPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGR 427
++G+ N F+ L+ C+ + G ++ +M +E + +V + G
Sbjct: 176 KHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVE--SSLVYFYAQCGE 233
Query: 428 LNQAWEFVMRMPERPNSDVWAALLSSCRLHGN 459
L A M E + W A++S+C G+
Sbjct: 234 LTSALR-AFDMMEEKDVISWTAVISACSRKGH 264
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 197/420 (46%), Gaps = 43/420 (10%)
Query: 35 LSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLR 94
LSN + + + G H+ +K G + + L+ +Y KC + AR+VFD++
Sbjct: 217 LSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIV 276
Query: 95 DKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPL 154
++ + + MI + E+LGL R ++S EK+ + S+IL G +V L
Sbjct: 277 ERDIVVWGAMIAGLAHNKRQWEALGLFR-TMISEEKI--YPNSVILTTILPVLG-DVKAL 332
Query: 155 GDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLI 214
LG+ VH +LK+ VE+ V + L D Y K G +A R VF ++N IS T+L+
Sbjct: 333 -KLGKEVHAHVLKSKNYVEQPFVH-SGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALM 390
Query: 215 SGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNI 274
SGY G F A L + MQ+ FRP++
Sbjct: 391 SGYAANGRFDQA--------------------------------LRSIVWMQQEGFRPDV 418
Query: 275 STFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDH 334
T A+++ C+ + A + G+++ +K F ++ L ++L+ MYSKCG R+FD
Sbjct: 419 VTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDR 478
Query: 335 MHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDK 394
+ Q+NV +WT+MID Y +N +E+F+ M + P+ VT L+ C+ +
Sbjct: 479 LEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKH-RPDSVTMGRVLTVCSDLKALKL 537
Query: 395 GLEIF-QSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSS 453
G E+ ++ E++ P + A ++ + G+ G L A F S W A++ +
Sbjct: 538 GKELHGHILKKEFESIPFVS--ARIIKMYGKCGDLRSA-NFSFDAVAVKGSLTWTAIIEA 594
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 184/405 (45%), Gaps = 46/405 (11%)
Query: 30 PHSTLLSNTLQYYINSDTPSSGQTIHSHILKT-GFVPNTNISIKLLVLYLKCNCLRYARQ 88
P+S +L+ L + G+ +H+H+LK+ +V + L+ LY KC + R+
Sbjct: 314 PNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRR 373
Query: 89 VFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSG 148
VF + + ++ ++ Y G+ +++L + + G + D T + +L
Sbjct: 374 VFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRA 433
Query: 149 RNVAPLGDLGRIVHVQILKADVDVEKDDV-LCTALTDSYVKNGRIAYARTVFDVMSEKNV 207
G+ +H LK ++ +V L T+L Y K G Y +FD + ++NV
Sbjct: 434 IK------QGKEIHCYALK---NLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNV 484
Query: 208 ISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRS-LEVYIDMQ 266
+ T++I Y+ C R+ +EV+ M
Sbjct: 485 KAWTAMIDCYVEN---------------------------------CDLRAGIEVFRLML 511
Query: 267 RLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVV 326
RP+ T ++ CS + A ++G+++ ++K F + + +I MY KCG +
Sbjct: 512 LSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLR 571
Query: 327 DSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSAC 386
+ FD + K +WT++I+ YG N +A+ F++M + G PN TF + LS C
Sbjct: 572 SANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQM-VSRGFTPNTFTFTAVLSIC 630
Query: 387 AHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQA 431
+ AG VD+ F M Y ++P EHY+ V++LL R GR+ +A
Sbjct: 631 SQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 111/459 (24%), Positives = 196/459 (42%), Gaps = 65/459 (14%)
Query: 22 FLQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCN 81
+L+ ++T S L+ + + G+ +H HI G N + KL+ +Y C
Sbjct: 101 YLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACG 160
Query: 82 CLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQ--VEESLGLVRRLLVSGEKLDGFTFSMI 139
++ A++VFD+ + ++N ++ + G+ ++ L + G L+ ++ S +
Sbjct: 161 SVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNV 220
Query: 140 LKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVF 199
K+ S L + + L + L T+L D Y K G++ AR VF
Sbjct: 221 FKSFAGASA--------LRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVF 272
Query: 200 DVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEG--YSKTSECATR 257
D + V++DIVV+ AMI G ++K A
Sbjct: 273 D-------------------------------EIVERDIVVWGAMIAGLAHNKRQWEALG 301
Query: 258 SLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKT------PFFGHIKL 311
I +++ PN +I+ V A ++G++V + ++K+ PF +
Sbjct: 302 LFRTMISEEKIY--PNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPF-----V 354
Query: 312 GSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYG 371
S LID+Y KCG + RRVF Q+N SWT+++ GY NG D+AL MQ E G
Sbjct: 355 HSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQE-G 413
Query: 372 VVPNFVTFLSALSACAHAGLVDKGLEIF-QSMENEYKVKPRMEHYACVVDLLGRAGRLNQ 430
P+ VT + L CA + +G EI +++N + P + ++ + + G
Sbjct: 414 FRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLF--LPNVSLVTSLMVMYSKCGVPEY 471
Query: 431 AWEFVMRMPERPNSDVWAALL----SSCRLHGNTEMAKL 465
R+ +R N W A++ +C L E+ +L
Sbjct: 472 PIRLFDRLEQR-NVKAWTAMIDCYVENCDLRAGIEVFRL 509
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 130/314 (41%), Gaps = 47/314 (14%)
Query: 22 FLQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCN 81
++Q F P ++ L G+ IH + LK F+PN ++ L+V+Y KC
Sbjct: 408 WMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCG 467
Query: 82 CLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILK 141
Y ++FD L + + A+ MI Y++ + + + R +L+S + D T +L
Sbjct: 468 VPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLT 527
Query: 142 ASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDV 201
+ LG+ +H ILK + E + + Y K G + A FD
Sbjct: 528 VCSDLKALK------LGKELHGHILKK--EFESIPFVSARIIKMYGKCGDLRSANFSFDA 579
Query: 202 MSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEV 261
++ K ++ T++I Y LF+DA F++ V +
Sbjct: 580 VAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSR------------------------- 614
Query: 262 YIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMK----TPFFGHIKLGSALID 317
F PN TF +++ CS + + + +++ P H L +I+
Sbjct: 615 -------GFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSL---VIE 664
Query: 318 MYSKCGRVVDSRRV 331
+ ++CGRV +++R+
Sbjct: 665 LLNRCGRVEEAQRL 678
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 121/209 (57%), Gaps = 1/209 (0%)
Query: 254 CATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGS 313
C R + I++ P+ F + +C+ + + E ++V +++ F G KL +
Sbjct: 216 CQRRLYKDAIELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNN 275
Query: 314 ALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVV 373
+I M+ +C + D++RVFDHM K++ SW M+ Y NG D+AL LF++M ++G+
Sbjct: 276 MVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEM-TKHGLK 334
Query: 374 PNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWE 433
PN TFL+ ACA G +++ F SM+NE+ + P+ EHY V+ +LG+ G L +A +
Sbjct: 335 PNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQ 394
Query: 434 FVMRMPERPNSDVWAALLSSCRLHGNTEM 462
++ +P P +D W A+ + RLHG+ ++
Sbjct: 395 YIRDLPFEPTADFWEAMRNYARLHGDIDL 423
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 128/510 (25%), Positives = 231/510 (45%), Gaps = 58/510 (11%)
Query: 8 PFFSSRAL-FSPHQPFLQNHDFV-PHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVP 65
P F+S A + H F ++V P+S+ ++ +Q + G +++S I+K G+
Sbjct: 177 PDFASYAFPLTTHMAF----EYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSD 232
Query: 66 NTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLL 125
N + +L +Y C L AR++FD + ++ A+N MI LK ++E+ L R +L
Sbjct: 233 NVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNML 292
Query: 126 VSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKAD--VDVEKDDVLCTALT 183
+SG FT+S++L + + LG+++H +I+ +D D+ D+ AL
Sbjct: 293 MSGVDPTQFTYSIVLNGCSKLGSYS------LGKLIHARIIVSDSLADLPLDN----ALL 342
Query: 184 DSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNA 243
D Y G + A VF + N++S S+ISG G + A ++++ +
Sbjct: 343 DMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTP---- 398
Query: 244 MIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKT 303
RP+ TF++ I A + F G+ + Q+ K
Sbjct: 399 ---------------------------RPDEYTFSAAISATAEPERFVHGKLLHGQVTKL 431
Query: 304 PFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELF 363
+ + +G+ L+ MY K +++VFD M +++V WT MI G+ + G + A++ F
Sbjct: 432 GYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFF 491
Query: 364 QKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLG 423
+M E F + S + AC+ ++ +G E+F + M +VD+ G
Sbjct: 492 IEMYREKNRSDGF-SLSSVIGACSDMAMLRQG-EVFHCLAIRTGFDCVMSVCGALVDMYG 549
Query: 424 RAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANG-RPGAY 482
+ G+ A E + + P+ W ++L + HG M + A S ++ NG P A
Sbjct: 550 KNGKYETA-ETIFSLASNPDLKCWNSMLGAYSQHG---MVEKALSFFEQILENGFMPDAV 605
Query: 483 VALSNTLAAAEKWDSVSE--LREVMKERGI 510
LS A + + ++ L MKE+GI
Sbjct: 606 TYLSLLAACSHRGSTLQGKFLWNQMKEQGI 635
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/423 (23%), Positives = 194/423 (45%), Gaps = 38/423 (8%)
Query: 73 LLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLD 132
L+ +Y++C+ L AR+VFD + + + + + A + + SL + +
Sbjct: 28 LISMYVRCSSLEQARKVFDKMPQRNIVTL-FGLSAVFEYVSMGSSL--------HSQIIK 78
Query: 133 GFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRI 192
+F MI PL ++ V V++ + C ++T +K R
Sbjct: 79 LGSFQMIF----------FMPLNEIASSV-VELTRK----------CVSIT--VLKRARQ 115
Query: 193 AYAR--TVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSK 250
+A T + ++ ++ +LIS Y+ G + A +F K +++V +NA+ YS+
Sbjct: 116 IHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSR 175
Query: 251 TSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIK 310
+ A+ + + M +PN STF S++ C+++ +G + SQ++K + ++
Sbjct: 176 NPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVV 235
Query: 311 LGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEY 370
+ ++++ MYS CG + +RR+FD ++ ++ +W +MI G KN ++ L F+ M +
Sbjct: 236 VQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMS- 294
Query: 371 GVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQ 430
GV P T+ L+ C+ G G I + + A ++D+ G + +
Sbjct: 295 GVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNA-LLDMYCSCGDMRE 353
Query: 431 AWEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLA 490
A+ +V PN W +++S C +G E A L L ++ + RP Y + A
Sbjct: 354 AF-YVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRM-STPRPDEYTFSAAISA 411
Query: 491 AAE 493
AE
Sbjct: 412 TAE 414
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 153/342 (44%), Gaps = 44/342 (12%)
Query: 51 GQTIHSHILKTGFVPNTN---ISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGA 107
+ IH+ +L G T + L+ +Y++C L AR+VFD + + + +YN + A
Sbjct: 113 ARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSA 172
Query: 108 YLKQGQVEE-SLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQIL 166
Y + + L + K + TF+ +++
Sbjct: 173 YSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCA---------------------- 210
Query: 167 KADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDA 226
V +D ++ ++L +K G NV+ TS++ Y + G + A
Sbjct: 211 -----VLEDVLMGSSLNSQIIKLGY------------SDNVVVQTSVLGMYSSCGDLESA 253
Query: 227 ECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSM 286
IF ++D V +N MI G K + L + +M P T++ ++ CS
Sbjct: 254 RRIFDCVNNRDAVAWNTMIVGSLKNDKIED-GLMFFRNMLMSGVDPTQFTYSIVLNGCSK 312
Query: 287 VAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSM 346
+ ++ +G+ + ++++ + + L +AL+DMY CG + ++ VF +H N+ SW S+
Sbjct: 313 LGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSI 372
Query: 347 IDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAH 388
I G +NGF ++A+ +++++ P+ TF +A+SA A
Sbjct: 373 ISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAE 414
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 121/483 (25%), Positives = 223/483 (46%), Gaps = 61/483 (12%)
Query: 51 GQTIHSHILKTGFVPNTNISI--KLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAY 108
G+ IH + + +G V N+ + ++ +Y + YA VF + D+ + ++N +I +
Sbjct: 152 GEQIHGNAICSG-VSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSC 210
Query: 109 LKQGQVEESLG---LVRRLLVSGEKLDGFTFSMILKAST-----STSGRNVAPLGDLGRI 160
G E +L L+R + + + D +T SM++ + S + +A +G +
Sbjct: 211 SDSGNKEVALDQFWLMREMEI---QPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFL 267
Query: 161 VHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQ 220
+ +L A +D+ C L DS VK
Sbjct: 268 SNSIVLGAGIDMFSK---CNRLDDS-VK-------------------------------- 291
Query: 221 GLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASI 280
LF++ E D V+ N+MI YS C +L ++I + RP+ TF+S+
Sbjct: 292 -LFRELE-------KWDSVLCNSMIGSYSWHC-CGEDALRLFILAMTQSVRPDKFTFSSV 342
Query: 281 IGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNV 340
+ + + V + G V S ++K F + ++L++MY K G V + VF K++
Sbjct: 343 LSSMNAVM-LDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDL 401
Query: 341 FSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQ 400
W ++I G +N E+L +F ++ + + P+ VT + L AC +AG V++G++IF
Sbjct: 402 IFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFS 461
Query: 401 SMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNT 460
SME + V P EHYAC+++LL R G +N+A + ++P P+S +W +L + G+T
Sbjct: 462 SMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDT 521
Query: 461 EMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDTACSWVG 520
+A+ A + + + Y+ L +W++ +LR M E + S +
Sbjct: 522 RLAETVAKTMLE-SEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKIS 580
Query: 521 ADS 523
+S
Sbjct: 581 IES 583
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 168/370 (45%), Gaps = 13/370 (3%)
Query: 29 VPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQ 88
+P S S + + S +P+ + +H+ +L+ GFV T + L LY K + A Q
Sbjct: 1 MPSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQ 60
Query: 89 VFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSG 148
+FDD+ DK +N + K G + +L L D ++ +T SG
Sbjct: 61 LFDDIPDKNTITWNVCLKGLFKNGYLNNALDL----------FDEMPERDVVSWNTMISG 110
Query: 149 RNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVI 208
+ G V + + ++ + A + V++G + + +S N++
Sbjct: 111 LVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLV 170
Query: 209 SSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRL 268
S++ Y G+F A +F D+D+V +N +I S + +L+ + M+ +
Sbjct: 171 VWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGN-KEVALDQFWLMREM 229
Query: 269 NFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDS 328
+P+ T + ++ CS + G+Q + +K F + + A IDM+SKC R+ DS
Sbjct: 230 EIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDS 289
Query: 329 RRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAH 388
++F + + + SMI Y + ++AL LF + + V P+ TF S LS+ +
Sbjct: 290 VKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLF-ILAMTQSVRPDKFTFSSVLSS-MN 347
Query: 389 AGLVDKGLEI 398
A ++D G ++
Sbjct: 348 AVMLDHGADV 357
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 102/227 (44%), Gaps = 44/227 (19%)
Query: 272 PNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRV 331
P+ F+ ++ + + + + V +QL++ F G+ + +Y K G V+++ ++
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQL 61
Query: 332 FDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGL 391
FD + KN +W + G KNG+ + AL+LF +M E VV ++ T +S L +C G
Sbjct: 62 FDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMP-ERDVV-SWNTMISGLVSC---GF 116
Query: 392 VDKGLEIFQSMENEYKVKPR-------------MEH--------------------YACV 418
+ G+ +F M+ ++++P + H + V
Sbjct: 117 HEYGIRVFFDMQ-RWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSV 175
Query: 419 VDLLGRAGRLNQAWEFVMRMPERPNSDV--WAALLSSCRLHGNTEMA 463
+D+ R G + A + M +R DV W L+ SC GN E+A
Sbjct: 176 MDMYRRLGVFDYALSVFLTMEDR---DVVSWNCLILSCSDSGNKEVA 219
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 116/220 (52%), Gaps = 10/220 (4%)
Query: 268 LNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGS--ALIDMYSKCGRV 325
+N+ ++S + C + + V ++ + H+ L S L++MYS CG
Sbjct: 248 MNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKI--SASVSHLDLSSNHVLLEMYSNCGLA 305
Query: 326 VDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSA 385
++ VF+ M +KN+ +W +I + KNGF ++A+++F + + E G +P+ F A
Sbjct: 306 NEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFK-EEGNIPDGQLFRGIFYA 364
Query: 386 CAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSD 445
C G VD+GL F+SM +Y + P +E Y +V++ G L++A EFV RMP PN D
Sbjct: 365 CGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVD 424
Query: 446 VWAALLSSCRLHGNTEMAKLAAS-----ELFKLNANGRPG 480
VW L++ R+HGN E+ A + +LN R G
Sbjct: 425 VWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSREG 464
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 149/288 (51%), Gaps = 16/288 (5%)
Query: 168 ADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMS----EKNVISSTSLISGYMNQGLF 223
++ ++ D V+ T + DS KNG + YA ++FD M +V+ TSL++G N G +
Sbjct: 169 VEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRW 228
Query: 224 KDAECIF----QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFAS 279
+DA+ + ++ + D++ FNA+I+ + K + + E+Y +M R++ PNI T+ S
Sbjct: 229 RDADSLLRGMTKRKIKPDVITFNALIDAFVKEGK-FLDAEELYNEMIRMSIAPNIFTYTS 287
Query: 280 IIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQK- 338
+I M + +Q+ + F + ++LI+ + KC +V D+ ++F M QK
Sbjct: 288 LINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG 347
Query: 339 ---NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKG 395
N ++T++I G+G+ G P+ A E+F M + GV PN T+ L + G V K
Sbjct: 348 LTGNTITYTTLIQGFGQVGKPNVAQEVFSHM-VSRGVPPNIRTYNVLLHCLCYNGKVKKA 406
Query: 396 LEIFQSMENEYK--VKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPER 441
L IF+ M+ V P + Y ++ L G+L +A M +R
Sbjct: 407 LMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKR 454
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 87/431 (20%), Positives = 175/431 (40%), Gaps = 63/431 (14%)
Query: 29 VPHSTLLSNTL-QYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYAR 87
V H N L + S P + ++K GF P+ L+ + N + A
Sbjct: 103 VSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAM 162
Query: 88 QVFDDLRDKTLSA----YNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKAS 143
+ + + + + Y +I + K G V +L L ++ G + D ++ ++
Sbjct: 163 SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG- 221
Query: 144 TSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMS 203
SGR L R + + +K DV + AL D++VK G+ A +++ M
Sbjct: 222 LCNSGR-WRDADSLLRGMTKRKIKPDV------ITFNALIDAFVKEGKFLDAEELYNEMI 274
Query: 204 E----KNVISSTSLISGYMNQGLFKDAECIF----QKTVDKDIVVFNAMIEGYSKTSECA 255
N+ + TSLI+G+ +G +A +F K D+V + ++I G+ K +
Sbjct: 275 RMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKK-V 333
Query: 256 TRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSAL 315
+++++ +M + N T+ ++I V V Q+V S ++ +I+ + L
Sbjct: 334 DDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVL 393
Query: 316 IDMYSKCGRVVDSRRVFDHMHQK-------NVFSWTSMIDGYGKNGFPDEALELFQKMQI 368
+ G+V + +F+ M ++ N++++ ++ G NG ++AL +F+ M+
Sbjct: 394 LHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRK 453
Query: 369 E----------------------------------YGVVPNFVTFLSALSACAHAGLVDK 394
GV PN VT+ + +S GL +
Sbjct: 454 REMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHE 513
Query: 395 GLEIFQSMENE 405
+F+ M+ +
Sbjct: 514 AHVLFRKMKED 524
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 122/284 (42%), Gaps = 37/284 (13%)
Query: 234 VDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVG 293
V D+ N ++ + ++S+ S M +L F P+I TF S+I F +G
Sbjct: 103 VSHDLYTCNLLMNCFCQSSQPYLAS-SFLGKMMKLGFEPDIVTFTSLIN------GFCLG 155
Query: 294 QQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKN 353
+++ + + + +++M K +V +T++ID KN
Sbjct: 156 NRMEEAM---------SMVNQMVEMGIK----------------PDVVMYTTIIDSLCKN 190
Query: 354 GFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRME 413
G + AL LF +M+ YG+ P+ V + S ++ ++G + + M K+KP +
Sbjct: 191 GHVNYALSLFDQME-NYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKR-KIKPDVI 248
Query: 414 HYACVVDLLGRAGRLNQAWEF---VMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASEL 470
+ ++D + G+ A E ++RM PN + +L++ + G + A+ +
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM 308
Query: 471 FKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDT 514
AY +L N +K D ++ M ++G++ +T
Sbjct: 309 ETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 101/192 (52%), Gaps = 1/192 (0%)
Query: 284 CSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSW 343
C A E + V ++ + +A+I+MYS C V D+ +VF+ M + N +
Sbjct: 129 CGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTL 188
Query: 344 TSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSME 403
M+ + NG+ +EA++LF + + E G PN F S C G V +G FQ+M
Sbjct: 189 CVMMRCFVNNGYGEEAIDLFTRFK-EEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMY 247
Query: 404 NEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMA 463
EY + P MEHY V +L +G L++A FV RMP P+ DVW L++ R+HG+ E+
Sbjct: 248 REYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELG 307
Query: 464 KLAASELFKLNA 475
A + KL+A
Sbjct: 308 DRCAELVEKLDA 319
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 101/192 (52%), Gaps = 3/192 (1%)
Query: 284 CSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSW 343
C A + + V + + I +++I+MYS CG V D+ VF+ M ++N+ +W
Sbjct: 191 CGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETW 250
Query: 344 TSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSME 403
+I + KNG ++A++ F + + E G P+ F AC G +++GL F+SM
Sbjct: 251 CGVIRCFAKNGQGEDAIDTFSRFKQE-GNKPDGEMFKEIFFACGVLGDMNEGLLHFESMY 309
Query: 404 NEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSSCRLHGNTEMA 463
EY + P MEHY +V +L G L++A FV M PN D+W L++ R+HG+ +
Sbjct: 310 KEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVHGDLILG 367
Query: 464 KLAASELFKLNA 475
+ +L+A
Sbjct: 368 DRCQDMVEQLDA 379
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/436 (22%), Positives = 197/436 (45%), Gaps = 36/436 (8%)
Query: 100 AYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGR 159
+N +I + E++ L+ R++ G + D FT+ ++ + GD+
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNG--------LCKRGDIDL 238
Query: 160 IVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEK----NVISSTSLIS 215
+ + +E D V+ T + D+ + A +F M K NV++ SLI
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 216 GYMNQGLFKDAECIF----QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFR 271
N G + DA + ++ ++ ++V F+A+I+ + K + + ++Y +M + +
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK-LVEAEKLYDEMIKRSID 357
Query: 272 PNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRV 331
P+I T++S+I M + + + ++ F ++ + LI + K RV + +
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 332 FDHMHQK----NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACA 387
F M Q+ N ++ ++I G + G D A ++F+KM + GV P+ +T+ L
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM-VSDGVPPDIITYSILLDGLC 476
Query: 388 HAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMP---ERPNS 444
G ++K L +F+ ++ K++P + Y +++ + +AG++ W+ + +PN
Sbjct: 477 KYGKLEKALVVFEYLQKS-KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 535
Query: 445 DVWAALLSS-CRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWD----SVS 499
++ ++S CR G E A E+ + G Y NTL A D + +
Sbjct: 536 IIYTTMISGFCR-KGLKEEADALFREMKEDGTLPNSGTY----NTLIRARLRDGDKAASA 590
Query: 500 ELREVMKERGISKDTA 515
EL + M+ G D +
Sbjct: 591 ELIKEMRSCGFVGDAS 606
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/381 (20%), Positives = 177/381 (46%), Gaps = 26/381 (6%)
Query: 98 LSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDL 157
L +YN +I + ++ Q+ +L ++ +++ G + D T S +L G+ ++ L
Sbjct: 115 LYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCH--GKRISEAVAL 172
Query: 158 GRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVM----SEKNVISSTSL 213
+ V ++ + + V L + + + A + D M + ++ + ++
Sbjct: 173 VDQMFV------MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTV 226
Query: 214 ISGYMNQGLFKDAECIFQK----TVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLN 269
++G +G A + +K ++ D+V++ +I+ +L ++ +M
Sbjct: 227 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN-VNDALNLFTEMDNKG 285
Query: 270 FRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSR 329
RPN+ T+ S+I + ++ S +++ ++ SALID + K G++V++
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345
Query: 330 RVFDHMHQK----NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSA 385
+++D M ++ ++F+++S+I+G+ + DEA +F+ M I PN VT+ + +
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM-ISKDCFPNVVTYNTLIKG 404
Query: 386 CAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPER---P 442
A V++G+E+F+ M V + Y ++ L +AG + A + +M P
Sbjct: 405 FCKAKRVEEGMELFREMSQRGLVGNTVT-YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP 463
Query: 443 NSDVWAALLSSCRLHGNTEMA 463
+ ++ LL +G E A
Sbjct: 464 DIITYSILLDGLCKYGKLEKA 484
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/507 (20%), Positives = 213/507 (42%), Gaps = 65/507 (12%)
Query: 28 FVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYAR 87
+ P+ LS+ L Y +S S + + TG+ PNT
Sbjct: 147 YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNT-------------------- 186
Query: 88 QVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTS 147
+N +I + E++ L+ R++ G + D T+ +++
Sbjct: 187 -----------VTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG----- 230
Query: 148 GRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEK-- 205
+ GD ++ +E ++ + D K + A +F M K
Sbjct: 231 ---LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 287
Query: 206 --NVISSTSLISGYMNQGLFKDAECIF----QKTVDKDIVVFNAMIEGYSKTSECATRSL 259
NV++ +SLIS N G + DA + ++ ++ D+ F+A+I+ + K + +
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK-LVEAE 346
Query: 260 EVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMY 319
++Y +M + + P+I T++S+I M + +Q+ ++ F + + LI +
Sbjct: 347 KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGF 406
Query: 320 SKCGRVVDSRRVFDHMHQK----NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPN 375
K RV + VF M Q+ N ++ +I G + G D A E+F++M + GV PN
Sbjct: 407 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM-VSDGVPPN 465
Query: 376 FVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFV 435
+T+ + L G ++K + +F+ ++ K++P + Y +++ + +AG++ W+
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRS-KMEPTIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 436 MRMP---ERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAA 492
+ +P+ + ++S G+ E A E+ + G Y NTL A
Sbjct: 525 CNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCY----NTLIRA 580
Query: 493 EKWD----SVSELREVMKERGISKDTA 515
D + +EL + M+ G + D +
Sbjct: 581 RLRDGDREASAELIKEMRSCGFAGDAS 607
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 94/466 (20%), Positives = 196/466 (42%), Gaps = 102/466 (21%)
Query: 104 MIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHV 163
++ Y ++ E++ LV ++ V+G + + TF+ ++ G +H
Sbjct: 157 LLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIH----------------GLFLHN 200
Query: 164 QILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLF 223
+ +A AL D V G + ++++ +++G +G
Sbjct: 201 KASEA-----------MALIDRMVAKG------------CQPDLVTYGVVVNGLCKRG-- 235
Query: 224 KDAECIF-------QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNIST 276
D + F Q ++ ++++N +I+G K +L ++ +M+ RPN+ T
Sbjct: 236 -DTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH-MDDALNLFKEMETKGIRPNVVT 293
Query: 277 FASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMH 336
++S+I + ++ S +++ + SALID + K G++V++ +++D M
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 337 QK----NVFSWTSMIDGY-----------------GKNGFPD------------------ 357
++ ++ +++S+I+G+ K+ FPD
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413
Query: 358 EALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYAC 417
E +E+F++M + G+V N VT+ + AG D EIF+ M ++ V P + Y
Sbjct: 414 EGMEVFREMS-QRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYNT 471
Query: 418 VVDLLGRAGRLNQA---WEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELF-KL 473
++D L + G+L +A +E++ R P + ++ G E +LF L
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE----DGWDLFCNL 527
Query: 474 NANGRPGAYVALSNTLAAAEKWDSVSE---LREVMKERGISKDTAC 516
+ G VA + ++ + S E L + MKE G ++ C
Sbjct: 528 SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 573
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 107/253 (42%), Gaps = 9/253 (3%)
Query: 265 MQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGR 324
MQ L N T++ +I + + V ++MK + +I S+L++ Y R
Sbjct: 107 MQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR 166
Query: 325 VVDSRRVFDHM----HQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFL 380
+ ++ + D M +Q N ++ ++I G + EA+ L +M + G P+ VT+
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRM-VAKGCQPDLVTYG 225
Query: 381 SALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPE 440
++ G D + ME + K++P + Y ++D L + ++ A M
Sbjct: 226 VVVNGLCKRGDTDLAFNLLNKME-QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMET 284
Query: 441 ---RPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDS 497
RPN +++L+S +G A S++ + N + AL + K
Sbjct: 285 KGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVE 344
Query: 498 VSELREVMKERGI 510
+L + M +R I
Sbjct: 345 AEKLYDEMVKRSI 357
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 8/206 (3%)
Query: 274 ISTFASIIGA---CSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRR 330
I F ++G C V A E + V + TP + +I+MYS C D+
Sbjct: 109 IVDFPRLLGLAKLCGEVEALEEARVVHDCI--TPL--DARSYHTVIEMYSGCRSTDDALN 164
Query: 331 VFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAG 390
VF+ M ++N +W +MI KNG + A+++F + IE G P+ F + AC G
Sbjct: 165 VFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRF-IEEGNKPDKEIFKAVFFACVSIG 223
Query: 391 LVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAAL 450
+++GL F+SM +Y + ME Y V+++L G L++A +FV RM P+ ++W L
Sbjct: 224 DINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETL 283
Query: 451 LSSCRLHGNTEMAKLAASELFKLNAN 476
++ C + G E+ A + KL+A+
Sbjct: 284 MNLCWVQGYLELGDRFAELIKKLDAS 309
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/440 (20%), Positives = 195/440 (44%), Gaps = 36/440 (8%)
Query: 100 AYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGR 159
+N +I + + E++ LV R++V G + D T+ +++ + GD+
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNG--------LCKRGDIDL 239
Query: 160 IVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEK----NVISSTSLIS 215
+ + +E V+ + D+ + A +F M K NV++ SLI
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 216 GYMNQGLFKDAECIF----QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFR 271
N G + DA + ++ ++ ++V F+A+I+ + K + + ++Y +M + +
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK-LVEAEKLYDEMIKRSID 358
Query: 272 PNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRV 331
P+I T++S+I M + + + ++ F ++ + LI + K RV + +
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL 418
Query: 332 FDHMHQK----NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACA 387
F M Q+ N ++T++I G+ + D A +F++M + GV+P+ +T+ L
Sbjct: 419 FREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQM-VSDGVLPDIMTYSILLDGLC 477
Query: 388 HAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMP---ERPNS 444
+ G V+ L +F+ ++ K++P + Y +++ + +AG++ W+ + +PN
Sbjct: 478 NNGKVETALVVFEYLQRS-KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 536
Query: 445 DVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNT-LAAAEKWDSVSELRE 503
+ ++S G E A E+ + G Y L L +K S +RE
Sbjct: 537 VTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIRE 596
Query: 504 VMKERGISKDTACSWVGADS 523
+ +C +VG S
Sbjct: 597 M---------RSCRFVGDAS 607
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 152/320 (47%), Gaps = 28/320 (8%)
Query: 98 LSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDL 157
L Y+ +I + ++ Q+ +L ++ +++ G + D T + +L R + +
Sbjct: 116 LYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCH-GNRISDAVSLV 174
Query: 158 GRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEK----NVISSTSL 213
G++V ++ + D L ++ R + A + D M K ++++ +
Sbjct: 175 GQMV-------EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIV 227
Query: 214 ISGYMNQG-------LFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQ 266
++G +G L K E Q ++ +V++N +I+ +L ++ +M
Sbjct: 228 VNGLCKRGDIDLALSLLKKME---QGKIEPGVVIYNTIIDALCNYKN-VNDALNLFTEMD 283
Query: 267 RLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVV 326
RPN+ T+ S+I + ++ S +++ ++ SALID + K G++V
Sbjct: 284 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 343
Query: 327 DSRRVFDHMHQK----NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSA 382
++ +++D M ++ ++F+++S+I+G+ + DEA +F+ M I PN VT+ +
Sbjct: 344 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM-ISKDCFPNVVTYNTL 402
Query: 383 LSACAHAGLVDKGLEIFQSM 402
+ A VD+G+E+F+ M
Sbjct: 403 IKGFCKAKRVDEGMELFREM 422
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 180/392 (45%), Gaps = 50/392 (12%)
Query: 104 MIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMIL-------KASTSTS------GRN 150
++ Y ++ +++ LV +++ G K D FTF+ ++ KAS + + R
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 151 VAP-LGDLGRIVHVQILKADVD-------------VEKDDVLCTALTDSYVKNGRIAYAR 196
P L G +V+ + D+D ++ + V+ + DS K + A
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAV 278
Query: 197 TVFDVMSEK----NVISSTSLISGYMNQGLFKDA----ECIFQKTVDKDIVVFNAMIEGY 248
+F M K NV++ SLI+ N G + DA + +K ++ ++V FNA+I+ +
Sbjct: 279 DLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAF 338
Query: 249 SKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGH 308
K + + +++ +M + + P+ T+ +I M + +Q+ ++ +
Sbjct: 339 FKEGK-LVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPN 397
Query: 309 IKLGSALIDMYSKCGRVVDSRRVFDHMHQK----NVFSWTSMIDGYGKNGFPDEALELFQ 364
I+ + LI+ + KC RV D +F M Q+ N ++T++I G+ + G D A +F+
Sbjct: 398 IQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFK 457
Query: 365 KMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEH----YACVVD 420
+M + V + +T+ L G +D L IF+ Y K ME Y +++
Sbjct: 458 QM-VSNRVPTDIMTYSILLHGLCSYGKLDTALVIFK-----YLQKSEMELNIFIYNTMIE 511
Query: 421 LLGRAGRLNQAWEFVMRMPERPNSDVWAALLS 452
+ +AG++ +AW+ + +P+ + ++S
Sbjct: 512 GMCKAGKVGEAWDLFCSLSIKPDVVTYNTMIS 543
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/421 (19%), Positives = 175/421 (41%), Gaps = 48/421 (11%)
Query: 28 FVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYAR 87
+ P LS+ L Y +S S + +++ G+ P+T L+ N A
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 88 QVFDDLRDK----TLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKAS 143
+ D + + L Y ++ K+G ++ +L L+ ++ + K + F+ I+ +
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSL 268
Query: 144 -------------TSTSGRNVAP-----------LGDLGRIVHVQILKADV---DVEKDD 176
T + + P L + GR L +++ + +
Sbjct: 269 CKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNV 328
Query: 177 VLCTALTDSYVKNGRIAYARTVFDVMSEKNV----ISSTSLISGYMNQGLFKDAECIFQK 232
V AL D++ K G++ A + + M ++++ I+ LI+G+ +A+ +F+
Sbjct: 329 VTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKF 388
Query: 233 TVDKD----IVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVA 288
V KD I +N +I G+ K +E++ +M + N T+ +II
Sbjct: 389 MVSKDCLPNIQTYNTLINGFCKCKR-VEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAG 447
Query: 289 AFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQK----NVFSWT 344
+ Q V Q++ I S L+ G++ + +F ++ + N+F +
Sbjct: 448 DCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYN 507
Query: 345 SMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMEN 404
+MI+G K G EA +LF + I+ P+ VT+ + +S L+ + ++F+ M+
Sbjct: 508 TMIEGMCKAGKVGEAWDLFCSLSIK----PDVVTYNTMISGLCSKRLLQEADDLFRKMKE 563
Query: 405 E 405
+
Sbjct: 564 D 564
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 124/288 (43%), Gaps = 18/288 (6%)
Query: 238 IVVFNAMIEGYSKTSECATRSLEVYI----DMQRLNFRPNISTFASIIGACSMVAAFEVG 293
IV FN ++ +K ++ E+ I MQ L ++ T++ I + +
Sbjct: 83 IVEFNKLLSAVAKMNK-----FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLA 137
Query: 294 QQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHM----HQKNVFSWTSMIDG 349
V +++MK + I S+L++ Y R+ D+ + D M ++ + F++T++I G
Sbjct: 138 LAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG 197
Query: 350 YGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVK 409
+ EA+ L +M ++ G P+ VT+ + ++ G +D L + ME ++K
Sbjct: 198 LFLHNKASEAVALVDQM-VQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKME-AARIK 255
Query: 410 PRMEHYACVVDLLGRAGRLNQAWEFVMRMPE---RPNSDVWAALLSSCRLHGNTEMAKLA 466
+ + ++D L + + A + M RPN + +L++ +G A
Sbjct: 256 ANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRL 315
Query: 467 ASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDT 514
S + + N + AL + K +L E M +R I DT
Sbjct: 316 LSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 125/256 (48%), Gaps = 16/256 (6%)
Query: 188 KNGRIAYARTVFDVMSEK----NVISSTSLISGYMNQGLFKDAECIFQKTVD----KDIV 239
K GR++ A +F+ + E +V S TSLIS + N G +++A +F+K + ++
Sbjct: 185 KEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLI 244
Query: 240 VFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQ 299
+N ++ + K + + M+ P+ T+ ++I C + + QV +
Sbjct: 245 TYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEE 304
Query: 300 LMKTPFFGHIKLG-SALIDMYSKCGRVVDSRRVFDHM----HQKNVFSWTSMIDGYGKNG 354
MK F + K+ +AL+D+Y K R ++ +V + M ++ ++ S+I Y ++G
Sbjct: 305 -MKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDG 363
Query: 355 FPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEH 414
DEA+EL +M E G P+ T+ + LS AG V+ + IF+ M N KP +
Sbjct: 364 MLDEAMELKNQMA-EKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNA-GCKPNICT 421
Query: 415 YACVVDLLGRAGRLNQ 430
+ + + G G+ +
Sbjct: 422 FNAFIKMYGNRGKFTE 437
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/408 (20%), Positives = 173/408 (42%), Gaps = 58/408 (14%)
Query: 73 LLVLYLKCNCLRYARQVFDDLR----DKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSG 128
LL +Y K + + A +V +++ ++ YN +I AY + G ++E++ L ++ G
Sbjct: 320 LLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379
Query: 129 EKLDGFTFSMIL------------------------KASTSTSGRNVAPLGDLGRIVHVQ 164
K D FT++ +L K + T + G+ G+ +
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMM 439
Query: 165 ILKADVDV---EKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISS----TSLISGY 217
+ +++V D V L + +NG + VF M + +LIS Y
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499
Query: 218 MNQGLFKDAECIFQKTVD----KDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPN 273
G F+ A ++++ +D D+ +N ++ ++ +S +V +M+ +PN
Sbjct: 500 SRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGG-MWEQSEKVLAEMEDGRCKPN 558
Query: 274 ISTFASIIGACSMVAAFEVGQQV--QSQLMKTPFFGHIK----LGSALIDMYSKCGRVVD 327
T+ CS++ A+ G+++ L + + G I+ L L+ + SKC + +
Sbjct: 559 ELTY------CSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPE 612
Query: 328 SRRVFDHMHQK----NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSAL 383
+ R F + ++ ++ + SM+ YG+ +A + M+ E G P+ T+ S +
Sbjct: 613 AERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMK-ERGFTPSMATYNSLM 671
Query: 384 SACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQA 431
+ + K EI + + + +KP + Y V+ R R+ A
Sbjct: 672 YMHSRSADFGKSEEILREILAK-GIKPDIISYNTVIYAYCRNTRMRDA 718
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/399 (20%), Positives = 158/399 (39%), Gaps = 57/399 (14%)
Query: 27 DFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYA 86
D V +TLL+ Q ++S+ SG + + + GFVP L+ Y +C A
Sbjct: 453 DIVTWNTLLAVFGQNGMDSEV--SG--VFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Query: 87 RQVFDDLRD----KTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKA 142
V+ + D LS YN ++ A + G E+S ++ + K + T+ +L A
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Query: 143 STSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVM 202
+G+ + + L V+ +++ + K VL + D
Sbjct: 569 --YANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCD------------------ 608
Query: 203 SEKNVISSTSLISGYMNQGLFKDAECIFQKTVDK----DIVVFNAMIEGYSKTSECATRS 258
L +AE F + ++ DI N+M+ Y + A ++
Sbjct: 609 -------------------LLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVA-KA 648
Query: 259 LEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDM 318
V M+ F P+++T+ S++ S A F +++ +++ I + +I
Sbjct: 649 NGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYA 708
Query: 319 YSKCGRVVDSRRVFDHMHQK----NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVP 374
Y + R+ D+ R+F M +V ++ + I Y + +EA+ + + M I++G P
Sbjct: 709 YCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYM-IKHGCRP 767
Query: 375 NFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRME 413
N T+ S + D+ + + N P+ E
Sbjct: 768 NQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAPKGE 806
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 109/473 (23%), Positives = 207/473 (43%), Gaps = 73/473 (15%)
Query: 39 LQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCN----CLRYARQVFDDLR 94
+ Y+++ G + +++K G + I LV K CL R++ D
Sbjct: 161 FRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGV 220
Query: 95 DKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPL 154
T+ + ++ ++G+VE+S L++ V G K + +T++ I+ A R+ + +
Sbjct: 221 KITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQ--RDFSGV 278
Query: 155 GDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISS---- 210
+ ++++K D V + V T L + VKNG+++ A +FD M E+ + S
Sbjct: 279 EGV-----LKVMKKD-GVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVY 332
Query: 211 TSLISGYMNQGLFKDAECIFQKTVDKDI-------------------------------- 238
TSLIS +G K A +F + +K +
Sbjct: 333 TSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQS 392
Query: 239 -------VVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFE 291
VVFN +I+GY + S+ +Y M++ F+ ++ T +I + + ++
Sbjct: 393 KGVNITQVVFNTLIDGYCRKGMVDEASM-IYDVMEQKGFQADVFTCNTIASCFNRLKRYD 451
Query: 292 VGQQVQSQLMKTPFFGHIKLGSA----LIDMYSKCGRVVDSRRVFDHMH----QKNVFSW 343
+Q ++M+ G +KL + LID+Y K G V +++R+F M Q N ++
Sbjct: 452 EAKQWLFRMME----GGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITY 507
Query: 344 TSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSME 403
MI Y K G EA +L M+ G+ P+ T+ S + A VD+ + +F M
Sbjct: 508 NVMIYAYCKQGKIKEARKLRANMEAN-GMDPDSYTYTSLIHGECIADNVDEAMRLFSEMG 566
Query: 404 NEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERP---NSDVWAALLSS 453
+ + Y ++ L +AG+ ++A+ M + ++ V+ AL+ S
Sbjct: 567 LK-GLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGS 618
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 146/323 (45%), Gaps = 14/323 (4%)
Query: 211 TSLISGYMNQGLFKDAECIFQKTVD----KDIVVFNAMIEGYSKTSECATRSLEVYIDMQ 266
+SL+ G +G ++A + ++ VD ++ V+NA+I+ K + L ++ M
Sbjct: 336 SSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAEL-LFDRMG 394
Query: 267 RLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVV 326
++ RPN T++ +I + +++ T + ++LI+ + K G +
Sbjct: 395 KIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDIS 454
Query: 327 DSRRVFDHMHQK----NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSA 382
+ M K V ++TS++ GY G ++AL L+ +M + G+ P+ TF +
Sbjct: 455 AAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK-GIAPSIYTFTTL 513
Query: 383 LSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPER- 441
LS AGL+ +++F M E+ VKP Y +++ G +++A+EF+ M E+
Sbjct: 514 LSGLFRAGLIRDAVKLFNEMA-EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKG 572
Query: 442 --PNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVS 499
P++ + L+ L G AK+ L K N Y L + K +
Sbjct: 573 IVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEAL 632
Query: 500 ELREVMKERGISKDTACSWVGAD 522
+ + M +RG+ D C V D
Sbjct: 633 SVCQEMVQRGVDLDLVCYGVLID 655
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 104/472 (22%), Positives = 187/472 (39%), Gaps = 77/472 (16%)
Query: 100 AYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGR 159
Y+ +I + ++G+++ +L + ++ +G KL + ++ ++ GD+
Sbjct: 404 TYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGH--------CKFGDISA 455
Query: 160 IVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISS----TSLIS 215
+ +E V T+L Y G+I A ++ M+ K + S T+L+S
Sbjct: 456 AEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLS 515
Query: 216 GYMNQGLFKDAECIFQKTVDKDI----VVFNAMIEGYSKTSECATRSLEVYIDMQRLNFR 271
G GL +DA +F + + ++ V +N MIEGY + + +++ E +M
Sbjct: 516 GLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGD-MSKAFEFLKEMTEKGIV 574
Query: 272 PNISTFASII------GACSMVAAFEVG-QQVQSQLMKTPFFGHI-------KLGSAL-- 315
P+ ++ +I G S F G + +L + + G + KL AL
Sbjct: 575 PDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSV 634
Query: 316 --------IDMYSKC-GRVVDS------RRVF----DHMHQKNV----FSWTSMIDGYGK 352
+D+ C G ++D R++F MH + + +TSMID K
Sbjct: 635 CQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSK 694
Query: 353 NGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRM 412
G EA ++ M I G VPN VT+ + ++ AG V++ E+ S P
Sbjct: 695 TGDFKEAFGIWDLM-INEGCVPNEVTYTAVINGLCKAGFVNEA-EVLCSKMQPVSSVPNQ 752
Query: 413 EHYACVVDLLGRAGRLNQAWEFVMRMPERPNSDVWAALLSS-----------CRLHGNTE 461
Y C +D+L + E M+ ++ + LL++ CR G E
Sbjct: 753 VTYGCFLDILTKG-------EVDMQKAVELHNAILKGLLANTATYNMLIRGFCR-QGRIE 804
Query: 462 MAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKD 513
A + + + Y + N L EL M E+GI D
Sbjct: 805 EASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPD 856
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/376 (19%), Positives = 154/376 (40%), Gaps = 75/376 (19%)
Query: 82 CLRYARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILK 141
CLR++ + +A + ++ K+G++EE+L LV+R++ G + F ++ ++
Sbjct: 325 CLRFS---------PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALID 375
Query: 142 ASTSTSGRNVAPLGDLGRIVHVQILKAD----VDVEKDDVLCTALTDSYVKNGRIAYART 197
+ GR H L D + + +DV + L D + + G++ A +
Sbjct: 376 SLCK------------GRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALS 423
Query: 198 VFDVMSEK----NVISSTSLISGYMNQGLFKDAECIFQKTVDKD----IVVFNAMIEGYS 249
M + +V SLI+G+ G AE + ++K +V + +++ GY
Sbjct: 424 FLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYC 483
Query: 250 KTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHI 309
+ ++L +Y +M P+I TF +++
Sbjct: 484 SKGK-INKALRLYHEMTGKGIAPSIYTFTTLL---------------------------- 514
Query: 310 KLGSALIDMYSKCGRVVDSRRVFDHMHQKNV----FSWTSMIDGYGKNGFPDEALELFQK 365
S L + G + D+ ++F+ M + NV ++ MI+GY + G +A E ++
Sbjct: 515 ---SGLF----RAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKE 567
Query: 366 MQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRA 425
M E G+VP+ ++ + G + ++F ++ + Y ++ R
Sbjct: 568 MT-EKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEICYTGLLHGFCRE 625
Query: 426 GRLNQAWEFVMRMPER 441
G+L +A M +R
Sbjct: 626 GKLEEALSVCQEMVQR 641
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 82/172 (47%), Gaps = 6/172 (3%)
Query: 235 DKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQ 294
D +IV +N +I+G K + ++ + D+ + +P++ T+ +++ V FE+G
Sbjct: 259 DVNIVPYNVLIDGLCKKQK-VWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGL 317
Query: 295 QVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDS----RRVFDHMHQKNVFSWTSMIDGY 350
++ +++ F S+L++ K G++ ++ +RV D N+F + ++ID
Sbjct: 318 EMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSL 377
Query: 351 GKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSM 402
K EA LF +M + G+ PN VT+ + G +D L M
Sbjct: 378 CKGRKFHEAELLFDRMG-KIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 183/408 (44%), Gaps = 33/408 (8%)
Query: 98 LSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDL 157
+SA+ +++ A +G+V ++L R ++ G ++ + + +LK G +V +
Sbjct: 217 VSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLK------GLSVDQIEVA 270
Query: 158 GRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNV----ISSTSL 213
R++ L D + V L + + K G + A +F VM ++ + I+ ++L
Sbjct: 271 SRLLS---LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTL 327
Query: 214 ISGYMNQGLFKDAECIFQKTVDK----DIVVFNAMIEGYSKTSECATRSLEVYIDMQRLN 269
I GY G+ +F + + K D+VVF++ I+ Y K+ + AT S+ VY M
Sbjct: 328 IDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASV-VYKRMLCQG 386
Query: 270 FRPNISTFASII-GACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDS 328
PN+ T+ +I G C +E + Q++K I S+LID + KCG +
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYE-AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 329 RRVFDHM----HQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALS 384
+++ M + +V + ++DG K G A+ KM + + N V F S +
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKM-LGQSIRLNVVVFNSLID 504
Query: 385 ACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPE---R 441
D+ L++F+ M Y +KP + + V+ + GRL +A RM +
Sbjct: 505 GWCRLNRFDEALKVFRLM-GIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLE 563
Query: 442 PNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTL 489
P++ + L+ + H M +LF L + A +A+ N +
Sbjct: 564 PDALAYCTLIDAFCKH----MKPTIGLQLFDLMQRNKISADIAVCNVV 607
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 178/418 (42%), Gaps = 47/418 (11%)
Query: 30 PHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLL----VLYLKCNCLRY 85
P S+ + + SG ++ ++K G+ P+ I L+ L + +R+
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483
Query: 86 ARQVFDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTS 145
+ ++ + +N +I + + + +E+L + R + + G K D TF+ +++ S
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSI- 542
Query: 146 TSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEK 205
GR L R+ + + E D + L D++ K+ + +FD+M ++
Sbjct: 543 MEGRLEEALFLFFRMFKMGL-------EPDALAYCTLIDAFCKHMKPTIGLQLFDLM-QR 594
Query: 206 NVISSTSLISGYMNQGLFK-----DAECIFQKTVD----KDIVVFNAMIEGYSKTSECAT 256
N IS+ + + LFK DA F ++ DIV +N MI GY C+
Sbjct: 595 NKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGY-----CSL 649
Query: 257 RSLE----VYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLG 312
R L+ ++ ++ F PN T +I + ++ S + + +
Sbjct: 650 RRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY 709
Query: 313 SALIDMYSKCGRVVDSRRVFDHMHQK----NVFSWTSMIDGYGKNGFPDEALELFQKMQI 368
L+D +SK + S ++F+ M +K ++ S++ +IDG K G DEA +F + I
Sbjct: 710 GCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ-AI 768
Query: 369 EYGVVPNFVTFLSALSA-CAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRA 425
+ ++P+ V + + C LV+ L + N VKP DLL RA
Sbjct: 769 DAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN--GVKPD--------DLLQRA 816
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 94/444 (21%), Positives = 181/444 (40%), Gaps = 86/444 (19%)
Query: 54 IHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDK----------------- 96
++ ILK G P+ L+ + KC LR +++D+
Sbjct: 413 MYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLS 472
Query: 97 ----------------------TLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGF 134
+ +N +I + + + +E+L + R + + G K D
Sbjct: 473 KQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVA 532
Query: 135 TFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAY 194
TF+ +++ S GR L R+ + + E D + L D++ K+ +
Sbjct: 533 TFTTVMRVSI-MEGRLEEALFLFFRMFKMGL-------EPDALAYCTLIDAFCKHMKPTI 584
Query: 195 ARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSEC 254
+FD+M ++N IS+ + + LFK C + K FN +IEG
Sbjct: 585 GLQLFDLM-QRNKISADIAVCNVVIHLLFK---CHRIEDASK---FFNNLIEG------- 630
Query: 255 ATRSLEVYIDMQRLNFRPNISTFASII-GACSMVAAFEVGQQVQSQLMKTPFFGHIKLGS 313
P+I T+ ++I G CS+ + +++ L TPF + +
Sbjct: 631 --------------KMEPDIVTYNTMICGYCSL-RRLDEAERIFELLKVTPFGPNTVTLT 675
Query: 314 ALIDMYSKCGRVVDSRRVFDHMHQK----NVFSWTSMIDGYGKNGFPDEALELFQKMQIE 369
LI + K + + R+F M +K N ++ ++D + K+ + + +LF++MQ E
Sbjct: 676 ILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQ-E 734
Query: 370 YGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLN 429
G+ P+ V++ + G VD+ IF + K+ P + YA ++ + GRL
Sbjct: 735 KGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA-KLLPDVVAYAILIRGYCKVGRLV 793
Query: 430 QA---WEFVMRMPERPNSDVWAAL 450
+A +E ++R +P+ + AL
Sbjct: 794 EAALLYEHMLRNGVKPDDLLQRAL 817
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 173/396 (43%), Gaps = 47/396 (11%)
Query: 28 FVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYAR 87
F+P ++ S L Y N+ + + + G V + ++ + K + AR
Sbjct: 479 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 538
Query: 88 QVFDDLRD----KTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKAS 143
+ F+++R+ + Y +I AYLK +V + L +L G + T+S ++
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598
Query: 144 TSTSGRNVAPLGDLGRI--------VHVQILKADVDVEKDDVLC-TALTDSYVKNGRIAY 194
+G+ R+ V + + D + E+ +V+ AL D + K+ R+
Sbjct: 599 CK-AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 657
Query: 195 ARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSEC 254
AR + D MS + + + +V++A+I+G K +
Sbjct: 658 ARKLLDAMS---------------------------MEGCEPNQIVYDALIDGLCKVGK- 689
Query: 255 ATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSA 314
+ EV +M F + T++S+I V ++ +V S++++ ++ + +
Sbjct: 690 LDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTE 749
Query: 315 LIDMYSKCGRVVDSRRVFDHMHQK----NVFSWTSMIDGYGKNGFPDEALELFQKMQIEY 370
+ID K G+ ++ ++ M +K NV ++T+MIDG+G G + LEL ++M +
Sbjct: 750 MIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK- 808
Query: 371 GVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEY 406
GV PN+VT+ + C G +D + + M+ +
Sbjct: 809 GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTH 844
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/445 (19%), Positives = 187/445 (42%), Gaps = 38/445 (8%)
Query: 101 YNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNV-APLGDLGR 159
+N ++ AY G + L+++++ G + G+ IL S ++ L DL
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGH-MPGYVVYNILIGSICGDKDSLNCDLLDLAE 433
Query: 160 IVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMN 219
+ ++L A V + K +V ++ T G+ A +V M + I TS S +N
Sbjct: 434 KAYSEMLAAGVVLNKINV--SSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLN 491
Query: 220 ----QGLFKDAECIFQKT----VDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFR 271
+ A +F++ + D+ + M++ + K ++ + + +M+ +
Sbjct: 492 YLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAG-LIEQARKWFNEMREVGCT 550
Query: 272 PNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRV 331
PN+ T+ ++I A ++ ++ +I SALID + K G+V + ++
Sbjct: 551 PNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQI 610
Query: 332 FDHM--------------------HQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYG 371
F+ M + NV ++ +++DG+ K+ +EA +L M +E G
Sbjct: 611 FERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME-G 669
Query: 372 VVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQA 431
PN + + + + G +D+ E+ M +E+ + Y+ ++D + R + A
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEM-SEHGFPATLYTYSSLIDRYFKVKRQDLA 728
Query: 432 WEFVMRMPER---PNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNT 488
+ + +M E PN ++ ++ G T+ A + + Y A+ +
Sbjct: 729 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDG 788
Query: 489 LAAAEKWDSVSELREVMKERGISKD 513
K ++ EL E M +G++ +
Sbjct: 789 FGMIGKIETCLELLERMGSKGVAPN 813
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 149/317 (47%), Gaps = 28/317 (8%)
Query: 100 AYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGR 159
+ ++ +G+V ++L LV R++ G + G + + K + S N+ L +
Sbjct: 12 TFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNL-----LSK 66
Query: 160 IVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEK----NVISSTSLIS 215
+ I KA V V+ A+ D K+G +A+ +F M +K +VI+ + +I
Sbjct: 67 MEETHI-KAHV------VIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMID 119
Query: 216 GYMNQGLFKDAECIF----QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFR 271
+ G + DAE + ++ ++ D+V F+A+I K + + + E+Y DM R
Sbjct: 120 SFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGK-VSEAEEIYGDMLRRGIF 178
Query: 272 PNISTFASII-GACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRR 330
P T+ S+I G C + + + S K+ + S LI+ Y K RV +
Sbjct: 179 PTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTF-STLINGYCKAKRVDNGME 237
Query: 331 VFDHMHQK----NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSAC 386
+F MH++ N ++T++I G+ + G D A +L M I GV PN++TF S L++
Sbjct: 238 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVM-ISSGVAPNYITFQSMLASL 296
Query: 387 AHAGLVDKGLEIFQSME 403
+ K I + ++
Sbjct: 297 CSKKELRKAFAILEDLQ 313
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 127/290 (43%), Gaps = 14/290 (4%)
Query: 175 DDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKT- 233
D V T L + GR+ A + D M E+ ++I+G G + A + K
Sbjct: 9 DVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKME 68
Query: 234 ---VDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAF 290
+ +V++NA+I+ K + ++ +M P++ T++ +I + +
Sbjct: 69 ETHIKAHVVIYNAIIDRLCKDGH-HIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRW 127
Query: 291 EVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVF----SWTSM 346
+Q+ +++ + SALI+ K G+V ++ ++ M ++ +F ++ SM
Sbjct: 128 TDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSM 187
Query: 347 IDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEY 406
IDG+ K ++A + M P+ VTF + ++ A VD G+EIF M
Sbjct: 188 IDGFCKQDRLNDAKRMLDSMA-SKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 246
Query: 407 KVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPER---PNSDVWAALLSS 453
V + Y ++ + G L+ A + + M PN + ++L+S
Sbjct: 247 IVANTVT-YTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLAS 295
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 118/282 (41%), Gaps = 14/282 (4%)
Query: 237 DIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQV 296
D+V F ++ G C R L+ + R+ + +II + E +
Sbjct: 9 DVVTFTTLMNGLC----CEGRVLQALALVDRM-VEEGHQPYGTIINGLCKMGDTESALNL 63
Query: 297 QSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVF----SWTSMIDGYGK 352
S++ +T H+ + +A+ID K G + ++ +F MH K +F +++ MID + +
Sbjct: 64 LSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCR 123
Query: 353 NGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRM 412
+G +A +L + M IE + P+ VTF + ++A G V + EI+ M + P
Sbjct: 124 SGRWTDAEQLLRDM-IERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR-GIFPTT 181
Query: 413 EHYACVVDLLGRAGRLNQAWEFVMRMPER---PNSDVWAALLSSCRLHGNTEMAKLAASE 469
Y ++D + RLN A + M + P+ ++ L++ + E
Sbjct: 182 ITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 241
Query: 470 LFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGIS 511
+ + Y L + D+ +L VM G++
Sbjct: 242 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVA 283
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/404 (21%), Positives = 178/404 (44%), Gaps = 41/404 (10%)
Query: 21 PFLQNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKC 80
P L + V H LS+ P ++K GF P+ LL Y
Sbjct: 116 PLLCTCNIVMHCVCLSSQ---------PCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHW 166
Query: 81 NCLRYARQVFDDLR----DKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTF 136
N + A +FD + + Y +I K + ++ L ++ +G + + T+
Sbjct: 167 NRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTY 226
Query: 137 SMILKASTSTSGRNVAPLGDLGRIVHVQILKADV---DVEKDDVLCTALTDSYVKNGRIA 193
+ + V L ++GR L D+ +E + + TAL D++VK G++
Sbjct: 227 NAL-----------VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLM 275
Query: 194 YARTVFDVMSE----KNVISSTSLISGYMNQGLFKDAECIF----QKTVDKDIVVFNAMI 245
A+ +++VM + +V + SLI+G GL +A +F + + V++ +I
Sbjct: 276 EAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLI 335
Query: 246 EGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPF 305
G+ K+ ++++ +M + N T+ +I +V +V Q+V +Q+
Sbjct: 336 HGFCKSKR-VEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRA 394
Query: 306 FGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQK----NVFSWTSMIDGYGKNGFPDEALE 361
I+ + L+D G+V + +F++M ++ N+ ++T +I G K G ++A +
Sbjct: 395 PPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFD 454
Query: 362 LFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENE 405
LF + G+ PN +T+ + +S GL+ + +F+ M+ +
Sbjct: 455 LFCSL-FSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKED 497
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 136/292 (46%), Gaps = 19/292 (6%)
Query: 180 TALTDSYVKNGRIAYARTVFDVM----SEKNVISSTSLISGYMNQGLFKDAECIF----Q 231
T L KN + +A +F+ M S NV++ +L++G G + DA + +
Sbjct: 192 TTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMK 251
Query: 232 KTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFE 291
+ ++ +++ F A+I+ + K + + E+Y M +++ P++ T+ S+I M +
Sbjct: 252 RRIEPNVITFTALIDAFVKVGK-LMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLD 310
Query: 292 VGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQK----NVFSWTSMI 347
+Q+ + + + + + + LI + K RV D ++F M QK N ++T +I
Sbjct: 311 EARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLI 370
Query: 348 DGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYK 407
GY G PD A E+F +M P+ T+ L G V+K L IF+ M +
Sbjct: 371 QGYCLVGRPDVAQEVFNQMSSRRA-PPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKR-E 428
Query: 408 VKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPE---RPNSDVWAALLSS-CR 455
+ + Y ++ + + G++ A++ + +PN + ++S CR
Sbjct: 429 MDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 480
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 164/350 (46%), Gaps = 18/350 (5%)
Query: 180 TALTDSYVKNGRIAYARTVFDVMS----EKNVISSTSLISGYMNQGLFKDAECIFQKTV- 234
T L D + + R++ A + M E ++++ SL++G+ + F +A + + V
Sbjct: 118 TTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVG 177
Query: 235 ---DKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFE 291
+ ++V++N +I+ + + T +L+V M+++ RP++ T+ S+I +
Sbjct: 178 LGYEPNVVIYNTIIDSLCEKGQVNT-ALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWG 236
Query: 292 VGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQK----NVFSWTSMI 347
V ++ S +M+ + SALID+Y K G+++++++ ++ M Q+ N+ ++ S+I
Sbjct: 237 VSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLI 296
Query: 348 DGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYK 407
+G +G DEA ++ + + G PN VT+ + ++ A VD G++I M +
Sbjct: 297 NGLCIHGLLDEAKKVLNVL-VSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRD-G 354
Query: 408 VKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPE---RPNSDVWAALLSSCRLHGNTEMAK 464
V Y + +AG+ + A + + RM P+ + LL HG A
Sbjct: 355 VDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKAL 414
Query: 465 LAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDT 514
+ +L K Y + L A+K + L + +G+S D
Sbjct: 415 VRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDV 464
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 133/303 (43%), Gaps = 14/303 (4%)
Query: 223 FKDAECIFQKTVDK----DIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFA 278
F DA +F + IV F+ ++ +K ++ + ++ ++ L ++ +F
Sbjct: 60 FNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEA-VISLFRHLEMLGISHDLYSFT 118
Query: 279 SIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHM--- 335
++I A + ++MK F I +L++ + R ++ + D +
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 336 -HQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDK 394
++ NV + ++ID + G + AL++ + M+ + G+ P+ VT+ S ++ H+G
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMK-KMGIRPDVVTYNSLITRLFHSGTWGV 237
Query: 395 GLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPER---PNSDVWAALL 451
I M + P + ++ ++D+ G+ G+L +A + M +R PN + +L+
Sbjct: 238 SARILSDMM-RMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLI 296
Query: 452 SSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGIS 511
+ +HG + AK + L Y L N A++ D ++ VM G+
Sbjct: 297 NGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVD 356
Query: 512 KDT 514
DT
Sbjct: 357 GDT 359
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 135/323 (41%), Gaps = 60/323 (18%)
Query: 101 YNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKA--STSTSGRNVAPLGDLG 158
YN +I + ++GQV +L +++ + G + D T++ ++ + T G + L D+
Sbjct: 187 YNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMM 246
Query: 159 RIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEK----NVISSTSLI 214
R+ + D + +AL D Y K G++ A+ ++ M ++ N+++ SLI
Sbjct: 247 RM----------GISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLI 296
Query: 215 SGYMNQGLFKDAECIFQKTVDK----DIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNF 270
+G GL +A+ + V K + V +N +I GY K +++ M R
Sbjct: 297 NGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKR-VDDGMKILCVMSRDGV 355
Query: 271 RPNISTFASIIGACSMVAAFEVGQQVQSQLMKTP--------------FFGHIKLGSALI 316
+ T+ ++ F ++V +++ H K+G AL+
Sbjct: 356 DGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALV 415
Query: 317 DM---------------------YSKCGRVVDSRRVFDHMHQK----NVFSWTSMIDGYG 351
+ K +V D+ +F + K +V ++ +M+ G
Sbjct: 416 RLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLR 475
Query: 352 KNGFPDEALELFQKMQIEYGVVP 374
+ EA EL++KMQ E G++P
Sbjct: 476 RKRLWREAHELYRKMQKEDGLMP 498
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 191/429 (44%), Gaps = 32/429 (7%)
Query: 100 AYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGD--- 156
A N +I ++ K G++ ++ L+R ++S +D T++ ++ SG L D
Sbjct: 131 ALNVLIHSFCKVGRLSFAISLLRNRVIS---IDTVTYNTVI------SGLCEHGLADEAY 181
Query: 157 --LGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLI 214
L +V + IL D V L D + K G A+ + D +SE N+I+ T L+
Sbjct: 182 QFLSEMVKMGILP-------DTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILL 234
Query: 215 SGYMNQGLFKDA-ECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPN 273
S Y N ++A + D D+V F+++I K + L + +M+ ++ PN
Sbjct: 235 SSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGL-LLREMEEMSVYPN 293
Query: 274 ISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFD 333
T+ +++ + + + SQ++ + + + L+D K G + ++ + F
Sbjct: 294 HVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFK 353
Query: 334 HMHQK----NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHA 389
+ + NV ++T+++DG K G A + +M +E V+PN VT+ S ++
Sbjct: 354 MLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQM-LEKSVIPNVVTYSSMINGYVKK 412
Query: 390 GLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRM---PERPNSDV 446
G++++ + + + ME++ V P Y V+D L +AG+ A E M N+ +
Sbjct: 413 GMLEEAVSLLRKMEDQ-NVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYI 471
Query: 447 WAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMK 506
AL++ + G + K ++ Y +L + ++ E M+
Sbjct: 472 LDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQ 531
Query: 507 ERGISKDTA 515
ERG+ D
Sbjct: 532 ERGMPWDVV 540
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 106/503 (21%), Positives = 199/503 (39%), Gaps = 48/503 (9%)
Query: 58 ILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTL----SAYNYMIGAYLKQGQ 113
+L+ VPN L+ K L A + + +K++ Y+ MI Y+K+G
Sbjct: 355 LLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGM 414
Query: 114 VEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVA--------------------- 152
+EE++ L+R++ +GFT+ ++ +A
Sbjct: 415 LEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDA 474
Query: 153 ---PLGDLGRIVHVQILKADV---DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEK- 205
L +GRI V+ L D+ V D + T+L D + K G A + M E+
Sbjct: 475 LVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERG 534
Query: 206 ---NVISSTSLISGYMNQGLFKDA---ECIFQKTVDKDIVVFNAMIEGYSKTSECATRSL 259
+V+S LISG + G + + +K ++ DI FN M+ K + + L
Sbjct: 535 MPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGD-SEGIL 593
Query: 260 EVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMY 319
+++ M+ +P++ + ++G E + +Q+M ++ +D
Sbjct: 594 KLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTS 653
Query: 320 SKCGRVVDSRRVFDHMHQKNVF----SWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPN 375
SK R + + + + + ++I K G +A + M+ G +P+
Sbjct: 654 SKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEAR-GFIPD 712
Query: 376 FVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFV 435
VTF S + V K L + M E + P + Y ++ L AG + + +++
Sbjct: 713 TVTFNSLMHGYFVGSHVRKALSTYSVMM-EAGISPNVATYNTIIRGLSDAGLIKEVDKWL 771
Query: 436 MRMPER---PNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAA 492
M R P+ + AL+S GN + + E+ + Y L + A
Sbjct: 772 SEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANV 831
Query: 493 EKWDSVSELREVMKERGISKDTA 515
K EL + M +RG+S +T+
Sbjct: 832 GKMLQARELLKEMGKRGVSPNTS 854
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 112/515 (21%), Positives = 216/515 (41%), Gaps = 53/515 (10%)
Query: 28 FVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYAR 87
F+P + L+ +S + ++ +++ G +P +L K L
Sbjct: 199 FLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVD 258
Query: 88 QVFDDLRDKTLS----AYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKAS 143
+++ +++ + + YN +I + K G++EE+ + SG + ++F+ +++
Sbjct: 259 KIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGY 318
Query: 144 TSTSGRNVAPLGDLGRIVHVQILKADV--DVEKDDVLCTALTDSYVKNGRIAYARTVFDV 201
L D V ++L A + ++ AL D GRI AR +
Sbjct: 319 CKQG------LFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDF----GRIDDARELLSS 368
Query: 202 MSEKNVISSTSLISGYMNQGLFKDAECIFQK----TVDKDIVVFNAMIEGYSKTS--ECA 255
M+ +V+S +L+ GY+ G F +A +F + IV +N +I+G ++ E A
Sbjct: 369 MAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGA 428
Query: 256 TRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMK-----------TP 304
R E +M P++ T+ +++ + +V ++++ T
Sbjct: 429 QRLKE---EMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTR 485
Query: 305 FFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPDEALELFQ 364
G ++LG + K R+ + DH H ++ + IDG K G +A+E FQ
Sbjct: 486 AVGELRLGDS-----DKAFRLHEEMVATDH-HAPDLTIYNVRIDGLCKVGNLVKAIE-FQ 538
Query: 365 KMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGR 424
+ G+VP+ VT+ + + G ++ M + ++ P + Y ++ +
Sbjct: 539 RKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRK-RLYPSVITYFVLIYGHAK 597
Query: 425 AGRLNQAWEFVMRMPE---RPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPG- 480
AGRL QA+++ M + RPN ALL GN + A L K+ G P
Sbjct: 598 AGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDE---AYRYLCKMEEEGIPPN 654
Query: 481 --AYVALSNTLAAAEKWDSVSELREVMKERGISKD 513
+Y L + EKW+ V +L + M ++ I D
Sbjct: 655 KYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPD 689
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 103/489 (21%), Positives = 204/489 (41%), Gaps = 82/489 (16%)
Query: 54 IHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLS----AYNYMIGAYL 109
I ++ +G PN I L+ +L+ + A +V +++++ ++ YN +I
Sbjct: 439 IVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLS 498
Query: 110 KQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKAD 169
K +++E+ + ++ +G K + FT+ + S A +V+ ++ +
Sbjct: 499 KAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD-------KYVKEMR-E 550
Query: 170 VDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFK----- 224
V + VLCT L + Y K G++ A + + M ++ ++ + MN GLFK
Sbjct: 551 CGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMN-GLFKNDKVD 609
Query: 225 DAECIFQ----KTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASI 280
DAE IF+ K + D+ + +I G+SK S ++ +M PN+ + +
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS-SIFDEMVEEGLTPNVIIYNML 668
Query: 281 IGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQK-- 338
+G + + G + ++ + D M K
Sbjct: 669 LGG-----------------------------------FCRSGEIEKAKELLDEMSVKGL 693
Query: 339 --NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGL 396
N ++ ++IDGY K+G EA LF +M+++ G+VP+ + + + C V++ +
Sbjct: 694 HPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK-GLVPDSFVYTTLVDGCCRLNDVERAI 752
Query: 397 EIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPE-------RPNSDVWAA 449
IF + N+ + +++ + + G+ E + R+ + +PN +
Sbjct: 753 TIFGT--NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810
Query: 450 LLSSCRLHGNTEMAKLAASELFK--LNANGRPGAYVALSNTLAAAEKWDSVSELREVMKE 507
++ GN E AA ELF NAN P + ++ L +K +E+ V E
Sbjct: 811 MIDYLCKEGNLE----AAKELFHQMQNANLMP-TVITYTSLLNGYDKMGRRAEMFPVFDE 865
Query: 508 ---RGISKD 513
GI D
Sbjct: 866 AIAAGIEPD 874
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 147/307 (47%), Gaps = 49/307 (15%)
Query: 104 MIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHV 163
++ Y ++ +++ LV +++ G K D FTF+ ++ G +H
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH----------------GLFLHN 202
Query: 164 QILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLF 223
+ +A AL D V+ G + ++++ ++++G +G
Sbjct: 203 KASEA-----------VALVDQMVQRG------------CQPDLVTYGTVVNGLCKRGDI 239
Query: 224 KDAECIFQK----TVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFAS 279
A + +K ++ D+V++N +I+G K +L ++ +M RP++ T++S
Sbjct: 240 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH-MDDALNLFTEMDNKGIRPDVFTYSS 298
Query: 280 IIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQK- 338
+I + ++ S +++ ++ SALID + K G++V++ +++D M ++
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358
Query: 339 ---NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKG 395
++F+++S+I+G+ + DEA +F+ M I PN VT+ + + A V++G
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELM-ISKDCFPNVVTYSTLIKGFCKAKRVEEG 417
Query: 396 LEIFQSM 402
+E+F+ M
Sbjct: 418 MELFREM 424
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 154/351 (43%), Gaps = 57/351 (16%)
Query: 101 YNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRI 160
YN +I K ++++L L + G + D FT+S ++ N D R+
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC-----NYGRWSDASRL 315
Query: 161 VHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEK----NVISSTSLISG 216
+ I + + + V +AL D++VK G++ A ++D M ++ ++ + +SLI+G
Sbjct: 316 LSDMIERK---INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 372
Query: 217 YMNQGLFKDAECIFQKTVDKD----IVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRP 272
+ +A+ +F+ + KD +V ++ +I+G+ K +E++ +M +
Sbjct: 373 FCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR-VEEGMELFREMSQRGLVG 431
Query: 273 NISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHI--------------KLGSALI-- 316
N T+ ++I + Q V Q++ +I KL A++
Sbjct: 432 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 491
Query: 317 ----------DMYS---------KCGRVVDSRRVFDHMHQK----NVFSWTSMIDGYGKN 353
D+Y+ K G+V D +F ++ K NV ++ +MI G+ +
Sbjct: 492 EYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRK 551
Query: 354 GFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMEN 404
G +EA L +KM+ E G +PN T+ + + A G + E+ + M +
Sbjct: 552 GSKEEADSLLKKMK-EDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRS 601
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 127/287 (44%), Gaps = 18/287 (6%)
Query: 238 IVVFNAMIEGYSKTSECATRSLEVYI----DMQRLNFRPNISTFASIIGACSMVAAFEVG 293
IV FN ++ +K ++ E+ I MQ L ++ T++ I + +
Sbjct: 83 IVEFNKLLSAVAKMNK-----FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLA 137
Query: 294 QQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHM----HQKNVFSWTSMIDG 349
V +++MK + I S+L++ Y R+ D+ + D M ++ + F++T++I G
Sbjct: 138 LAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG 197
Query: 350 YGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVK 409
+ EA+ L +M ++ G P+ VT+ + ++ G +D L + + ME + K++
Sbjct: 198 LFLHNKASEAVALVDQM-VQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKME-KGKIE 255
Query: 410 PRMEHYACVVDLLGRAGRLNQAWEFVMRMPE---RPNSDVWAALLSSCRLHGNTEMAKLA 466
+ Y ++D L + ++ A M RP+ +++L+S +G A
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315
Query: 467 ASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKD 513
S++ + N + AL + K +L + M +R I D
Sbjct: 316 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 172/365 (47%), Gaps = 42/365 (11%)
Query: 102 NYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMIL-------KASTSTS------G 148
N ++ + ++ +++ LV +++ G K D TF+ ++ KAS + +
Sbjct: 152 NSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQ 211
Query: 149 RNVAP-LGDLGRIVHVQILKADVD-------------VEKDDVLCTALTDSYVKNGRIAY 194
R P L G +V+ + D D +E + V+ + + DS K
Sbjct: 212 RGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD 271
Query: 195 ARTVFDVMSEK----NVISSTSLISGYMNQGLFKDAECIF----QKTVDKDIVVFNAMIE 246
A +F M K NVI+ +SLIS N G + DA + ++ ++ ++V F+A+I+
Sbjct: 272 ALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALID 331
Query: 247 GYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFF 306
+ K + ++ ++Y +M + + PNI T++S+I M+ +Q+ +++
Sbjct: 332 AFVKKGK-LVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCL 390
Query: 307 GHIKLGSALIDMYSKCGRVVDSRRVFDHMHQK----NVFSWTSMIDGYGKNGFPDEALEL 362
++ + LI+ + K RV +F M Q+ N ++T++I G+ + D A +
Sbjct: 391 PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 450
Query: 363 FQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLL 422
F++M + GV PN +T+ L G + K + +F+ ++ ++P + Y +++ +
Sbjct: 451 FKQM-VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS-TMEPDIYTYNIMIEGM 508
Query: 423 GRAGR 427
+AG+
Sbjct: 509 CKAGK 513
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 125/276 (45%), Gaps = 47/276 (17%)
Query: 173 EKDDVLCTALTDSYVKNGRIAYARTVFDVMSE----KNVISSTSLISGYMNQGLFKDAEC 228
E D V +L + + RI+ A + D M E + ++ T+LI G +A
Sbjct: 145 EPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVA 204
Query: 229 IFQKTVDK----DIVVFNAMIEGYSKTSE------------------------------C 254
+ + V + D+V + A++ G K + C
Sbjct: 205 LIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLC 264
Query: 255 ATR----SLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIK 310
R +L ++ +M+ RPN+ T++S+I + ++ S +++ ++
Sbjct: 265 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLV 324
Query: 311 LGSALIDMYSKCGRVVDSRRVFDHMHQK----NVFSWTSMIDGYGKNGFPDEALELFQKM 366
SALID + K G++V + ++++ M ++ N+F+++S+I+G+ EA ++ + M
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM 384
Query: 367 QIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSM 402
I +PN VT+ + ++ A VDKG+E+F+ M
Sbjct: 385 -IRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREM 419
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 108/253 (42%), Gaps = 9/253 (3%)
Query: 265 MQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGR 324
M+ L N+ T+ +I + + + ++MK + I ++L++ + R
Sbjct: 104 MEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNR 163
Query: 325 VVDSRRVFDHM----HQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFL 380
+ D+ + D M ++ + ++T++I G + EA+ L +M ++ G P+ VT+
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRM-VQRGCQPDLVTYG 222
Query: 381 SALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPE 440
+ ++ G D L + ME K++ + Y+ V+D L + + A M
Sbjct: 223 AVVNGLCKRGDTDLALNLLNKMEAA-KIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 281
Query: 441 ---RPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDS 497
RPN +++L+S +G A S++ + N + AL + K
Sbjct: 282 KGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVK 341
Query: 498 VSELREVMKERGI 510
+L E M +R I
Sbjct: 342 AEKLYEEMIKRSI 354
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/443 (22%), Positives = 184/443 (41%), Gaps = 66/443 (14%)
Query: 87 RQVFDD-LRDKT---LSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKA 142
+QV+ + L DK + YN M+ Y K G VEE+ V +++ +G D FT+
Sbjct: 203 KQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTY------ 256
Query: 143 STSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVM 202
T+L Y + + A VF+ M
Sbjct: 257 -------------------------------------TSLIMGYCQRKDLDSAFKVFNEM 279
Query: 203 ----SEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKD----IVVFNAMIEGYSKTSEC 254
+N ++ T LI G +A +F K D + + + +I+ SE
Sbjct: 280 PLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLC-GSER 338
Query: 255 ATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSA 314
+ +L + +M+ +PNI T+ +I + FE +++ Q+++ ++ +A
Sbjct: 339 KSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNA 398
Query: 315 LIDMYSKCGRVVDSRRVFDHMHQK----NVFSWTSMIDGYGKNGFPDEALELFQKMQIEY 370
LI+ Y K G + D+ V + M + N ++ +I GY K+ +A+ + KM +E
Sbjct: 399 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNV-HKAMGVLNKM-LER 456
Query: 371 GVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQ 430
V+P+ VT+ S + +G D + S+ N+ + P Y ++D L ++ R+ +
Sbjct: 457 KVLPDVVTYNSLIDGQCRSGNFDSAYRLL-SLMNDRGLVPDQWTYTSMIDSLCKSKRVEE 515
Query: 431 AWEFVMRMPER---PNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSN 487
A + + ++ PN ++ AL+ G + A L ++ N + AL +
Sbjct: 516 ACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIH 575
Query: 488 TLAAAEKWDSVSELREVMKERGI 510
L A K + L E M + G+
Sbjct: 576 GLCADGKLKEATLLEEKMVKIGL 598
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 107/486 (22%), Positives = 201/486 (41%), Gaps = 70/486 (14%)
Query: 56 SHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLS----AYNYMIGAYLKQ 111
S I++ G P+ L++ Y + L A +VF+++ K AY ++I
Sbjct: 242 SKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVA 301
Query: 112 GQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVD 171
+++E++ L ++ T+++++K+ + ++ A +L + + +K ++
Sbjct: 302 RRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEAL--NLVKEMEETGIKPNIH 359
Query: 172 VEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEK----NVISSTSLISGYMNQGLFKDA- 226
T L DS + AR + M EK NVI+ +LI+GY +G+ +DA
Sbjct: 360 TY------TVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAV 413
Query: 227 ---ECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGA 283
E + + + + +N +I+GY K++ +++ V M P++ T+ S+I
Sbjct: 414 DVVELMESRKLSPNTRTYNELIKGYCKSN--VHKAMGVLNKMLERKVLPDVVTYNSLIDG 471
Query: 284 CSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQK----N 339
F+ ++ S + +++ID K RV ++ +FD + QK N
Sbjct: 472 QCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPN 531
Query: 340 VFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSA-CAHAGL------- 391
V +T++IDGY K G DEA + +KM + +PN +TF + + CA L
Sbjct: 532 VVMYTALIDGYCKAGKVDEAHLMLEKM-LSKNCLPNSLTFNALIHGLCADGKLKEATLLE 590
Query: 392 ---------------------------VDKGLEIFQSMENEYKVKPRMEHYACVVDLLGR 424
D FQ M + KP Y + R
Sbjct: 591 EKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSS-GTKPDAHTYTTFIQTYCR 649
Query: 425 AGRLNQAWEFVMRMPER---PNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANG-RPG 480
GRL A + + +M E P+ +++L+ +G+ A L ++ G P
Sbjct: 650 EGRLLDAEDMMAKMRENGVSPDLFTYSSLIKG---YGDLGQTNFAFDVLKRMRDTGCEPS 706
Query: 481 AYVALS 486
+ LS
Sbjct: 707 QHTFLS 712
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 122/247 (49%), Gaps = 20/247 (8%)
Query: 172 VEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEK----NVISSTSLISGYMNQGLFKDAE 227
++ D V+ TA+ D K+G A+ +F M EK NV++ +I + + G + DA+
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 228 CIF----QKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASII-G 282
+ +K ++ DIV F+A+I + K + + + E+Y +M R + P T+ S+I G
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERK-VSEAEEIYKEMLRWSIFPTTITYNSMIDG 124
Query: 283 ACSMVAAFEVGQQVQSQLMK--TPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQK-- 338
C + + + S K +P + S LI+ Y K RV + +F MH++
Sbjct: 125 FCKQDRVDDAKRMLDSMASKGCSP---DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGI 181
Query: 339 --NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGL 396
N ++T++I G+ + G D A +L +M I GV P+++TF L+ + K
Sbjct: 182 VANTVTYTTLIHGFCQVGDLDAAQDLLNEM-ISCGVAPDYITFHCMLAGLCSKKELRKAF 240
Query: 397 EIFQSME 403
I + ++
Sbjct: 241 AILEDLQ 247
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 122/253 (48%), Gaps = 10/253 (3%)
Query: 265 MQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGR 324
M++ FRP S + ++IGA S V ++ + Q+ + + + L + LI ++K GR
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGR 218
Query: 325 VVDSRRVFDHMHQK----NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFL 380
V + + D M ++ + ID +GK G D A + F +++ G+ P+ VT+
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEAN-GLKPDEVTYT 277
Query: 381 SALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPE 440
S + A +D+ +E+F+ +E +V P Y ++ G AG+ ++A+ + R
Sbjct: 278 SMIGVLCKANRLDEAVEMFEHLEKNRRV-PCTYAYNTMIMGYGSAGKFDEAYSLLERQRA 336
Query: 441 R---PNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDS 497
+ P+ + +L+ R G + A L E K +A Y L + L A K D+
Sbjct: 337 KGSIPSVIAYNCILTCLRKMGKVDEA-LKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDT 395
Query: 498 VSELREVMKERGI 510
ELR+ M++ G+
Sbjct: 396 AFELRDSMQKAGL 408
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/479 (21%), Positives = 203/479 (42%), Gaps = 46/479 (9%)
Query: 59 LKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTL----SAYNYMIGAYLKQGQV 114
+K PN + L+ + + L A ++ D ++ L N M+ K ++
Sbjct: 369 MKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428
Query: 115 EESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRI-----VHVQILKAD 169
+E+ + + D TF ++ LG +GR+ V+ ++L D
Sbjct: 429 DEACAMFEEMDYKVCTPDEITFCSLIDG-----------LGKVGRVDDAYKVYEKML--D 475
Query: 170 VDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAE-- 227
D + ++ T+L ++ +GR ++ M +N L++ YM+ +FK E
Sbjct: 476 SDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMD-CMFKAGEPE 534
Query: 228 ---CIFQKTVDK----DIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASI 280
+F++ + D ++ +I G K A + E++ M+ + + +
Sbjct: 535 KGRAMFEEIKARRFVPDARSYSILIHGLIKAG-FANETYELFYSMKEQGCVLDTRAYNIV 593
Query: 281 IGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQK-- 338
I Q+ ++ F + ++ID +K R+ ++ +F+ K
Sbjct: 594 IDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRI 653
Query: 339 --NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGL 396
NV ++S+IDG+GK G DEA + +++ ++ G+ PN T+ S L A A +++ L
Sbjct: 654 ELNVVIYSSLIDGFGKVGRIDEAYLILEEL-MQKGLTPNLYTWNSLLDALVKAEEINEAL 712
Query: 397 EIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQA---WEFVMRMPERPNSDVWAALLSS 453
FQSM+ E K P Y +++ L + + N+A W+ + + +P++ + ++S
Sbjct: 713 VCFQSMK-ELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISG 771
Query: 454 CRLHGNTEMAKLAASELFKLNANGRP--GAYVALSNTLAAAEKWDSVSELREVMKERGI 510
GN A A + FK N G P Y A+ L+ + L E + RG+
Sbjct: 772 LAKAGNIAEAG-ALFDRFKANG-GVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 111/516 (21%), Positives = 208/516 (40%), Gaps = 74/516 (14%)
Query: 57 HILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDL----RDKTLSAYNYMIGAYLKQG 112
I G P+ ++ + K N L A ++F+ L R AYN MI Y G
Sbjct: 263 EIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAG 322
Query: 113 QVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDV 172
+ +E+ L+ R G ++ IL L +G++ + LK ++
Sbjct: 323 KFDEAYSLLERQRAKGSIPSVIAYNCILTC-----------LRKMGKVD--EALKVFEEM 369
Query: 173 EKD------------DVLCTA--------LTDSYVKNGRIAYARTV-------------- 198
+KD D+LC A L DS K G RTV
Sbjct: 370 KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLD 429
Query: 199 -----FDVMSEK----NVISSTSLISGYMNQGLFKDAECIFQKTVDKDI----VVFNAMI 245
F+ M K + I+ SLI G G DA +++K +D D +V+ ++I
Sbjct: 430 EACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLI 489
Query: 246 EGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPF 305
+ + ++Y DM N P++ + + E G+ + ++ F
Sbjct: 490 KNFFNHGR-KEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRF 548
Query: 306 FGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQK----NVFSWTSMIDGYGKNGFPDEALE 361
+ S LI K G ++ +F M ++ + ++ +IDG+ K G ++A +
Sbjct: 549 VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQ 608
Query: 362 LFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDL 421
L ++M+ + G P VT+ S + A +D+ +F+ +++ +++ + Y+ ++D
Sbjct: 609 LLEEMKTK-GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK-RIELNVVIYSSLIDG 666
Query: 422 LGRAGRLNQAW---EFVMRMPERPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGR 478
G+ GR+++A+ E +M+ PN W +LL + A + + +L
Sbjct: 667 FGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPN 726
Query: 479 PGAYVALSNTLAAAEKWDSVSELREVMKERGISKDT 514
Y L N L K++ + M+++G+ T
Sbjct: 727 QVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPST 762
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/408 (19%), Positives = 180/408 (44%), Gaps = 47/408 (11%)
Query: 62 GFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRD----KTLSAYNYMIGAYLKQGQVEES 117
GF P+ N I++++ +K N LR V +R SAY +IGA+ +
Sbjct: 128 GFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMM 187
Query: 118 LGLVRRL--------------LVSGEKLDGFTFSMI----------LKASTSTSGRNVAP 153
L L +++ L+ G +G S + L A +
Sbjct: 188 LTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDS 247
Query: 154 LGDLGRIVHVQILKADVD---VEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISS 210
G +G++ +++ ++ D+V T++ K R+ A +F+ + + +
Sbjct: 248 FGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPC 307
Query: 211 T----SLISGYMNQGLFKDAECIFQKTVDK----DIVVFNAMIEGYSKTSECATRSLEVY 262
T ++I GY + G F +A + ++ K ++ +N ++ K + +L+V+
Sbjct: 308 TYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGK-VDEALKVF 366
Query: 263 IDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKC 322
+M++ + PN+ST+ +I + +++ + K F +++ + ++D K
Sbjct: 367 EEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKS 425
Query: 323 GRVVDSRRVFDHMHQK----NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVT 378
++ ++ +F+ M K + ++ S+IDG GK G D+A ++++KM ++ N +
Sbjct: 426 QKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKM-LDSDCRTNSIV 484
Query: 379 FLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAG 426
+ S + + G + G +I++ M N+ P ++ +D + +AG
Sbjct: 485 YTSLIKNFFNHGRKEDGHKIYKDMINQ-NCSPDLQLLNTYMDCMFKAG 531
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/451 (21%), Positives = 202/451 (44%), Gaps = 42/451 (9%)
Query: 86 ARQVFDDLRDKTLS----AYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILK 141
A +FD + + L+ +N +I +G+V E+ LV +++ G +D T+ I+
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 142 ASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDV 201
+ +GD +++ + ++ D V+ +A+ D K+G + A+ +F
Sbjct: 270 G--------MCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 202 MSEK----NVISSTSLISGYMNQGLFKDAECIF----QKTVDKDIVVFNAMIEGYSKTSE 253
M EK NV + +I G+ + G + DA+ + ++ ++ D++ FNA+I K +
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 254 CATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGS 313
+ R F P+ T+ S+I F+ + + LM +P + +
Sbjct: 382 LFEAEKLCDEMLHRCIF-PDTVTYNSMIYGFCKHNRFDDAKHM-FDLMASP---DVVTFN 436
Query: 314 ALIDMYSKCGRVVDSRRVFDHMHQK----NVFSWTSMIDGYGKNGFPDEALELFQKMQIE 369
+ID+Y + RV + ++ + ++ N ++ ++I G+ + + A +LFQ+M I
Sbjct: 437 TIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM-IS 495
Query: 370 YGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLN 429
+GV P+ +T L +++ LE+F+ ++ K+ Y ++ + + +++
Sbjct: 496 HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMS-KIDLDTVAYNIIIHGMCKGSKVD 554
Query: 430 QAWEFVMRMP---ERPNSDVWAALLSSCRLHGNTEMAKLAASELF-KLNANGRP---GAY 482
+AW+ +P P+ + ++S G + ++ A+ LF K+ NG Y
Sbjct: 555 EAWDLFCSLPIHGVEPDVQTYNVMISG--FCGKSAISD--ANVLFHKMKDNGHEPDNSTY 610
Query: 483 VALSNTLAAAEKWDSVSELREVMKERGISKD 513
L A + D EL M+ G S D
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/431 (21%), Positives = 186/431 (43%), Gaps = 61/431 (14%)
Query: 100 AYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGR 159
++ ++ + +G+V E++ LV R++ ++ D T S ++ GR L + R
Sbjct: 142 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLING-LCLKGRVSEALVLIDR 200
Query: 160 IVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISS----TSLIS 215
+V + D+V + + K+G A A +F M E+N+ +S + +I
Sbjct: 201 MVEYGF-------QPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVID 253
Query: 216 GYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNIS 275
G F DA L ++ +M+ + ++
Sbjct: 254 SLCKDGSFDDA--------------------------------LSLFNEMEMKGIKADVV 281
Query: 276 TFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHM 335
T++S+IG ++ G ++ +++ + SALID++ K G++++++ +++ M
Sbjct: 282 TYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM 341
Query: 336 HQKNV----FSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGL 391
+ + ++ S+IDG+ K EA ++F M + G P+ VT+ +++ A
Sbjct: 342 ITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM-VSKGCEPDIVTYSILINSYCKAKR 400
Query: 392 VDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPER---PNSDVWA 448
VD G+ +F+ + ++ + P Y +V ++G+LN A E M R P+ +
Sbjct: 401 VDDGMRLFREISSKGLI-PNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYG 459
Query: 449 ALLSSCRLHGNTEMAKLAASELFKLNANGR----PGAYVALSNTLAAAEKWDSVSELREV 504
LL L N E+ K A E+F+ R G Y + + + A K D L
Sbjct: 460 ILLDG--LCDNGELNK--ALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 515
Query: 505 MKERGISKDTA 515
+ ++G+ D
Sbjct: 516 LSDKGVKPDVV 526
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/437 (20%), Positives = 182/437 (41%), Gaps = 74/437 (16%)
Query: 24 QNHDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCL 83
Q D V STL++ S + +++ GF P+ +L K
Sbjct: 171 QRPDLVTVSTLINGLCL----KGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS 226
Query: 84 RYARQVFDDLRDKTLSA----YNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMI 139
A +F + ++ + A Y+ +I + K G +++L L + + G K D T+S +
Sbjct: 227 ALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 286
Query: 140 LKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVF 199
+ N D +++ I + ++ D V +AL D +VK G++ A+ ++
Sbjct: 287 IGGLC-----NDGKWDDGAKMLREMIGR---NIIPDVVTFSALIDVFVKEGKLLEAKELY 338
Query: 200 DVMSEKNV----ISSTSLISGYMNQGLFKDAECIFQKTVDK----DIVVFNAMIEGYSKT 251
+ M + + I+ SLI G+ + +A +F V K DIV ++ +I Y K
Sbjct: 339 NEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA 398
Query: 252 SECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKL 311
+ ++ ++ PN T+ +++ L
Sbjct: 399 KR-VDDGMRLFREISSKGLIPNTITYNTLV-----------------------------L 428
Query: 312 GSALIDMYSKCGRVVDSRRVFDHMHQK----NVFSWTSMIDGYGKNGFPDEALELFQKMQ 367
G + + G++ ++ +F M + +V ++ ++DG NG ++ALE+F+KMQ
Sbjct: 429 G------FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482
Query: 368 ---IEYGV-VPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLG 423
+ G+ + N + + +A VD +F S+ ++ VKP + Y ++ L
Sbjct: 483 KSRMTLGIGIYNII-----IHGMCNASKVDDAWSLFCSLSDK-GVKPDVVTYNVMIGGLC 536
Query: 424 RAGRLNQAWEFVMRMPE 440
+ G L++A +M E
Sbjct: 537 KKGSLSEADMLFRKMKE 553
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/288 (19%), Positives = 116/288 (40%), Gaps = 25/288 (8%)
Query: 26 HDFVPHSTLLSNTLQYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRY 85
+ +P S + ++ + +++ ++ G P+T L+ + K NCL
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 368
Query: 86 ARQVFDDLRDK----TLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILK 141
A Q+FD + K + Y+ +I +Y K +V++ + L R + G + T++ ++
Sbjct: 369 ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVL 428
Query: 142 ASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDV 201
+ N A + + + V V L D NG + A +F+
Sbjct: 429 GFCQSGKLNAAK-----ELFQEMVSRG---VPPSVVTYGILLDGLCDNGELNKALEIFEK 480
Query: 202 MSEKNVISSTS----LISGYMNQGLFKDAECIF----QKTVDKDIVVFNAMIEGYSKTSE 253
M + + +I G N DA +F K V D+V +N MI G K
Sbjct: 481 MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 540
Query: 254 CATRSLEVYIDMQRLNFRPNISTFASII----GACSMVAAFEVGQQVQ 297
+ + ++ M+ P+ T+ +I G ++++ E+ ++++
Sbjct: 541 LSEADM-LFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMK 587
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 129/269 (47%), Gaps = 15/269 (5%)
Query: 177 VLCTALTDSYVKNGRIAYARTVFDVMSEK----NVISSTSLISGYMNQGLFKDA----EC 228
V+ + D K+ ++ A + + M + +V++ SLISG + G + DA C
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSC 246
Query: 229 IFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVA 288
+ ++ + D+ FNA+I+ K + + E Y +M R + P+I T++ +I M +
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGR-VSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYS 305
Query: 289 AFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQ----KNVFSWT 344
+ +++ ++ F + S LI+ Y K +V ++F M Q +N ++T
Sbjct: 306 RLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYT 365
Query: 345 SMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMEN 404
+I GY + G + A E+F++M + GV PN +T+ L G ++K L I M+
Sbjct: 366 ILIQGYCRAGKLNVAEEIFRRM-VFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQK 424
Query: 405 EYKVKPRMEHYACVVDLLGRAGRLNQAWE 433
+ + Y ++ + +AG + AW+
Sbjct: 425 N-GMDADIVTYNIIIRGMCKAGEVADAWD 452
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 152/342 (44%), Gaps = 22/342 (6%)
Query: 179 CTALTDSYVKNGRIAYARTVFDVM----SEKNVISSTSLISGYMNQGLFKDAECIFQKTV 234
C L + + + +++ A + M E ++++ SL++G+ DA +F + V
Sbjct: 119 CNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMV 178
Query: 235 ----DKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAF 290
++V++N +I+G K+ + +L++ M++ P++ T+ S+I +
Sbjct: 179 GMGYKPNVVIYNTIIDGLCKSKQ-VDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRW 237
Query: 291 EVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQK----NVFSWTSM 346
++ S + K + + +ALID K GRV ++ ++ M ++ ++ +++ +
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297
Query: 347 IDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEY 406
I G DEA E+F M + G P+ VT+ ++ + V+ G+++F M
Sbjct: 298 IYGLCMYSRLDEAEEMFGFM-VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356
Query: 407 KVKPRMEHYACVVDLLGRAGRLNQAWEFVMRM---PERPNSDVWAALLSSCRLHGNTEMA 463
V+ + Y ++ RAG+LN A E RM PN + LL +G E A
Sbjct: 357 VVRNTVT-YTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKA 415
Query: 464 KLAASELFKLNANGRPGAYVALSNTLA----AAEKWDSVSEL 501
+ +++ K + Y + + A+ WD L
Sbjct: 416 LVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSL 457
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 160/398 (40%), Gaps = 60/398 (15%)
Query: 29 VPHSTLLSNTL-QYYINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYAR 87
+PH+ N L + S + ++K G P+ LL + + + + A
Sbjct: 112 IPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDAL 171
Query: 88 QVFDDL----RDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKAS 143
+FD + + YN +I K QV+ +L L+ R+ G D T++ ++
Sbjct: 172 YMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGL 231
Query: 144 TSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMS 203
S SGR D R+V + ++ D AL D+ VK GR++ A ++ M
Sbjct: 232 CS-SGR----WSDATRMVSCMTKR---EIYPDVFTFNALIDACVKEGRVSEAEEFYEEMI 283
Query: 204 EK----NVISSTSLISGYMNQGLFKDAECIFQKTVDK----DIVVFNAMIEGYSKTSE-- 253
+ ++++ + LI G +AE +F V K D+V ++ +I GY K+ +
Sbjct: 284 RRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVE 343
Query: 254 ----------------------------CATRSL----EVYIDMQRLNFRPNISTFASII 281
C L E++ M PNI T+ ++
Sbjct: 344 HGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLL 403
Query: 282 GACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQK--- 338
E + + + K I + +I K G V D+ ++ ++ +
Sbjct: 404 HGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLM 463
Query: 339 -NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPN 375
+++++T+M+ G K G EA LF+KM+ E G++PN
Sbjct: 464 PDIWTYTTMMLGLYKKGLRREADALFRKMK-EDGILPN 500
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/451 (21%), Positives = 204/451 (45%), Gaps = 42/451 (9%)
Query: 86 ARQVFDDLRDKTLS----AYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILK 141
A +FD + + L+ +N +I +G+V E+ LV +++ G +D T+ I+
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 142 ASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDV 201
+ +GD +++ + ++ D V+ +A+ D K+G + A+ +F
Sbjct: 270 G--------MCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 202 MSEK----NVISSTSLISGYMNQGLFKDAECIF----QKTVDKDIVVFNAMIEGYSKTSE 253
M EK NV + +I G+ + G + DA+ + ++ ++ D++ FNA+I K +
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 254 CATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGS 313
+ ++ +M P+ T+ S+I F+ + + LM +P + +
Sbjct: 382 -LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM-FDLMASP---DVVTFN 436
Query: 314 ALIDMYSKCGRVVDSRRVFDHMHQK----NVFSWTSMIDGYGKNGFPDEALELFQKMQIE 369
+ID+Y + RV + ++ + ++ N ++ ++I G+ + + A +LFQ+M I
Sbjct: 437 TIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM-IS 495
Query: 370 YGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLN 429
+GV P+ +T L +++ LE+F+ ++ K+ Y ++ + + +++
Sbjct: 496 HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMS-KIDLDTVAYNIIIHGMCKGSKVD 554
Query: 430 QAWEFVMRMP---ERPNSDVWAALLSSCRLHGNTEMAKLAASELF-KLNANGRP---GAY 482
+AW+ +P P+ + ++S G + ++ A+ LF K+ NG Y
Sbjct: 555 EAWDLFCSLPIHGVEPDVQTYNVMISG--FCGKSAISD--ANVLFHKMKDNGHEPDNSTY 610
Query: 483 VALSNTLAAAEKWDSVSELREVMKERGISKD 513
L A + D EL M+ G S D
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 103/481 (21%), Positives = 199/481 (41%), Gaps = 83/481 (17%)
Query: 84 RYARQVFDDLRDKTL----SAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMI 139
R+A + DD+ + S YN +I A G E+L + +++ +G D T +++
Sbjct: 63 RWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIV 122
Query: 140 LKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVF 199
L S SGR + + + +++K V D + K G+ + A +F
Sbjct: 123 L--SAYKSGRQYSKA-----LSYFELMKG-AKVRPDTTTFNIIIYCLSKLGQSSQALDLF 174
Query: 200 DVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSL 259
+ M EK AEC D+V F +++ YS E
Sbjct: 175 NSMREKR-------------------AEC------RPDVVTFTSIMHLYSVKGEIEN-CR 208
Query: 260 EVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMY 319
V+ M +PNI ++ +++GA ++ V + + + + L++ Y
Sbjct: 209 AVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSY 268
Query: 320 SKCGRVVDSRRVFDHMHQK----NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPN 375
+ + ++ VF M ++ NV ++ ++ID YG NGF EA+E+F++M+ + G+ PN
Sbjct: 269 GRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQD-GIKPN 327
Query: 376 FVTFLSALSACA-----------------------------------HAGLVDKGLEIFQ 400
V+ + L+AC+ +A ++K + ++Q
Sbjct: 328 VVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQ 387
Query: 401 SMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERP---NSDVWAALLSSCRLH 457
SM + KVK + ++ R + +A ++ M + +V++++L +
Sbjct: 388 SMRKK-KVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQ 446
Query: 458 GNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDT-AC 516
G A+ +++ AY ++ + A+EKW EL M+ GI D+ AC
Sbjct: 447 GQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIAC 506
Query: 517 S 517
S
Sbjct: 507 S 507
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 179/399 (44%), Gaps = 38/399 (9%)
Query: 65 PNTNISIKLLVLYLKCNCLRYARQVFDDLRDK----TLSAYNYMIGAYLKQGQVEESLGL 120
P+T L+ Y K A ++FD+++D T Y ++G Y K G+VE++L L
Sbjct: 231 PDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDL 290
Query: 121 VRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADV---DVEKDDV 177
+ +G +T++ ++K LG GR+ D+ + D V
Sbjct: 291 FEEMKRAGCSPTVYTYTELIKG-----------LGKAGRVDEAYGFYKDMLRDGLTPDVV 339
Query: 178 LCTALTDSYVKNGRIAYARTVFDVMS----EKNVISSTSLISG-YMNQGLFKDAECIFQK 232
L + K GR+ VF M V+S ++I + ++ + F K
Sbjct: 340 FLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDK 399
Query: 233 ----TVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVA 288
+V ++ +I+GY KT+ ++L + +M F P + + S+I A
Sbjct: 400 MKADSVSPSEFTYSILIDGYCKTNR-VEKALLLLEEMDEKGFPPCPAAYCSLINALGKAK 458
Query: 289 AFEVGQQVQSQLMKTPFFGHI--KLGSALIDMYSKCGRVVDSRRVFDHMHQK----NVFS 342
+E ++ +L + FG++ ++ + +I + KCG++ ++ +F+ M + +V++
Sbjct: 459 RYEAANELFKELKEN--FGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYA 516
Query: 343 WTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSM 402
+ +++ G K G +EA L +KM+ E G + + L+ A G+ + +E+F+++
Sbjct: 517 YNALMSGMVKAGMINEANSLLRKME-ENGCRADINSHNIILNGFARTGVPRRAIEMFETI 575
Query: 403 ENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPER 441
++ +KP Y ++ AG +A + M ++
Sbjct: 576 KHS-GIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDK 613
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 151/365 (41%), Gaps = 31/365 (8%)
Query: 171 DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISS----TSLISGYMNQGLFKDA 226
D D + +AL SY K GR A +FD M + + + T+L+ Y G + A
Sbjct: 228 DCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKA 287
Query: 227 ECIFQKT----VDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIG 282
+F++ + + +I+G K + Y DM R P++ +++
Sbjct: 288 LDLFEEMKRAGCSPTVYTYTELIKGLGKAGR-VDEAYGFYKDMLRDGLTPDVVFLNNLMN 346
Query: 283 ACSMVAAFEVGQQVQSQLMK---TPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKN 339
V E V S++ TP + + + ++ V + FD M +
Sbjct: 347 ILGKVGRVEELTNVFSEMGMWRCTPTV--VSYNTVIKALFESKAHVSEVSSWFDKMKADS 404
Query: 340 V----FSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKG 395
V F+++ +IDGY K ++AL L ++M E G P + S ++A A +
Sbjct: 405 VSPSEFTYSILIDGYCKTNRVEKALLLLEEMD-EKGFPPCPAAYCSLINALGKAKRYEAA 463
Query: 396 LEIFQSM-ENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPER---PNSDVWAALL 451
E+F+ + EN V R+ YA ++ G+ G+L++A + M + P+ + AL+
Sbjct: 464 NELFKELKENFGNVSSRV--YAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALM 521
Query: 452 SSCRLHGNTEMAKLAASELFKLNANG---RPGAYVALSNTLAAAEKWDSVSELREVMKER 508
S G M A S L K+ NG ++ + N A E+ E +K
Sbjct: 522 SGMVKAG---MINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHS 578
Query: 509 GISKD 513
GI D
Sbjct: 579 GIKPD 583
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 117/257 (45%), Gaps = 11/257 (4%)
Query: 260 EVYIDM-QRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDM 318
EVY +M + P+ T++++I + + + ++ ++ K+ + L+ +
Sbjct: 218 EVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGI 277
Query: 319 YSKCGRVVDSRRVFDHMHQ----KNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVP 374
Y K G+V + +F+ M + V+++T +I G GK G DEA ++ M + G+ P
Sbjct: 278 YFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDM-LRDGLTP 336
Query: 375 NFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVD-LLGRAGRLNQAWE 433
+ V + ++ G V++ +F M ++ P + Y V+ L +++
Sbjct: 337 DVVFLNNLMNILGKVGRVEELTNVFSEM-GMWRCTPTVVSYNTVIKALFESKAHVSEVSS 395
Query: 434 FVMRMPE---RPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLA 490
+ +M P+ ++ L+ E A L E+ + P AY +L N L
Sbjct: 396 WFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALG 455
Query: 491 AAEKWDSVSELREVMKE 507
A+++++ +EL + +KE
Sbjct: 456 KAKRYEAANELFKELKE 472
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 103/481 (21%), Positives = 199/481 (41%), Gaps = 83/481 (17%)
Query: 84 RYARQVFDDLRDKTL----SAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMI 139
R+A + DD+ + S YN +I A G E+L + +++ +G D T +++
Sbjct: 195 RWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIV 254
Query: 140 LKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVF 199
L S SGR + + + +++K V D + K G+ + A +F
Sbjct: 255 L--SAYKSGRQYSKA-----LSYFELMKG-AKVRPDTTTFNIIIYCLSKLGQSSQALDLF 306
Query: 200 DVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSL 259
+ M EK AEC D+V F +++ YS E
Sbjct: 307 NSMREKR-------------------AEC------RPDVVTFTSIMHLYSVKGEIEN-CR 340
Query: 260 EVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMY 319
V+ M +PNI ++ +++GA ++ V + + + + L++ Y
Sbjct: 341 AVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSY 400
Query: 320 SKCGRVVDSRRVFDHMHQK----NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPN 375
+ + ++ VF M ++ NV ++ ++ID YG NGF EA+E+F++M+ + G+ PN
Sbjct: 401 GRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQD-GIKPN 459
Query: 376 FVTFLSALSACA-----------------------------------HAGLVDKGLEIFQ 400
V+ + L+AC+ +A ++K + ++Q
Sbjct: 460 VVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQ 519
Query: 401 SMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERP---NSDVWAALLSSCRLH 457
SM + KVK + ++ R + +A ++ M + +V++++L +
Sbjct: 520 SMRKK-KVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQ 578
Query: 458 GNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKDT-AC 516
G A+ +++ AY ++ + A+EKW EL M+ GI D+ AC
Sbjct: 579 GQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIAC 638
Query: 517 S 517
S
Sbjct: 639 S 639
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 133/268 (49%), Gaps = 11/268 (4%)
Query: 204 EKNVISSTSLISGYMNQGLFKDAECIFQKTVD----KDIVVFNAMIEGYSKTSECATRSL 259
E +V++ +SLI+G+ DA + K + D+V++N +I+G K ++
Sbjct: 136 EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIG-LVNDAV 194
Query: 260 EVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMY 319
E++ M+R R + T+ S++ + ++ ++ ++ +A+ID++
Sbjct: 195 ELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVF 254
Query: 320 SKCGRVVDSRRVFDHMHQK----NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPN 375
K G+ ++ ++++ M ++ +VF++ S+I+G +G DEA ++ M + G +P+
Sbjct: 255 VKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM-VTKGCLPD 313
Query: 376 FVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFV 435
VT+ + ++ + VD+G ++F+ M V + Y ++ +AGR + A E
Sbjct: 314 VVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTIT-YNTIIQGYFQAGRPDAAQEIF 372
Query: 436 MRMPERPNSDVWAALLSSCRLHGNTEMA 463
RM RPN ++ LL ++ E A
Sbjct: 373 SRMDSRPNIRTYSILLYGLCMNWRVEKA 400
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 156/349 (44%), Gaps = 26/349 (7%)
Query: 98 LSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDL 157
L +YN +I + + +L +V +++ G + D T S ++ G V DL
Sbjct: 104 LYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQ--GNRVFDAIDL 161
Query: 158 GRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNV----ISSTSL 213
+ + DV V+ + D K G + A +FD M V ++ SL
Sbjct: 162 VSKMEEMGFRPDV------VIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSL 215
Query: 214 ISGYMNQGLFKDAECIFQKTVDKDIV----VFNAMIEGYSKTSECATRSLEVYIDMQRLN 269
++G G + DA + + V +DIV F A+I+ + K + + ++++Y +M R
Sbjct: 216 VAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGK-FSEAMKLYEEMTRRC 274
Query: 270 FRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSR 329
P++ T+ S+I M + +Q+ ++ + + LI+ + K RV +
Sbjct: 275 VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGT 334
Query: 330 RVFDHMHQK----NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSA 385
++F M Q+ + ++ ++I GY + G PD A E+F +M PN T+ L
Sbjct: 335 KLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR----PNIRTYSILLYG 390
Query: 386 CAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEF 434
V+K L +F++M+ +++ + Y V+ + + G + AW+
Sbjct: 391 LCMNWRVEKALVLFENMQKS-EIELDITTYNIVIHGMCKIGNVEDAWDL 438
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 142/320 (44%), Gaps = 58/320 (18%)
Query: 101 YNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRI 160
YN +I K G V +++ L R+ G + D T++ ++ A SGR D R+
Sbjct: 177 YNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV-AGLCCSGR----WSDAARL 231
Query: 161 VHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEK----NVISSTSLISG 216
+ +++ D+ + + TA+ D +VK G+ + A +++ M+ + +V + SLI+G
Sbjct: 232 MRDMVMR---DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288
Query: 217 YMNQGLFKDAECIFQKTVDK----DIVVFNAMIEGYSKTS----------ECATRSL--- 259
G +A+ + V K D+V +N +I G+ K+ E A R L
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348
Query: 260 ---------------------EVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQS 298
E++ R++ RPNI T++ ++ M E +
Sbjct: 349 TITYNTIIQGYFQAGRPDAAQEIF---SRMDSRPNIRTYSILLYGLCMNWRVEKALVLFE 405
Query: 299 QLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQK----NVFSWTSMIDGYGKNG 354
+ K+ I + +I K G V D+ +F + K +V S+T+MI G+ +
Sbjct: 406 NMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKR 465
Query: 355 FPDEALELFQKMQIEYGVVP 374
D++ L++KMQ E G++P
Sbjct: 466 QWDKSDLLYRKMQ-EDGLLP 484
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 107/470 (22%), Positives = 196/470 (41%), Gaps = 102/470 (21%)
Query: 99 SAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLG 158
+ +N +I +G+V E++ LV R++ +G + D T++ I+ + ++A DL
Sbjct: 159 TTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL--DLL 216
Query: 159 RIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISST----SLI 214
R + + +KADV + + DS ++G I A ++F M K + SS SL+
Sbjct: 217 RKMEERNVKADVFTY------STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 215 SGYMNQGLFKDAECIFQKTVDKDIV----VFNAMIEGYSKT----------SECATRSLE 260
G G + D + + V ++IV FN +++ + K E TR +
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
Query: 261 VYI--------------------DMQRLNFR----PNISTFASIIGACSMVAAFEVGQQV 296
I +M L R P+I TF S+I MV
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVK-------- 382
Query: 297 QSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQK----NVFSWTSMIDGYGK 352
RV D +VF ++ ++ N +++ ++ G+ +
Sbjct: 383 ---------------------------RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415
Query: 353 NGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRM 412
+G A ELFQ+M + +GV+P+ +T+ L G ++K LEIF+ ++ + K+ +
Sbjct: 416 SGKIKLAEELFQEM-VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ-KSKMDLGI 473
Query: 413 EHYACVVDLLGRAGRLNQAWEFVMRMP---ERPNSDVWAALLSSCRLHGNTEMAKLAASE 469
Y +++ + + G++ AW +P +PN + ++S G+ A +
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL--- 530
Query: 470 LFKLNANGRPGAYVALSNTLAAAEKWD----SVSELREVMKERGISKDTA 515
L K+ +G NTL A D + ++L E MK G S D +
Sbjct: 531 LRKMEEDGNAPNDCTY-NTLIRAHLRDGDLTASAKLIEEMKSCGFSADAS 579
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 156/347 (44%), Gaps = 46/347 (13%)
Query: 97 TLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGD 156
+L +N ++ +K+ R+++ SG D +T+ +++K + T+ +GD
Sbjct: 146 SLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTN-----RIGD 200
Query: 157 LGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISG 216
+++ QI+K V + V+ L + KNG++ AR++ M E N ++ LIS
Sbjct: 201 GFKLL--QIMKTS-GVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDVTFNILISA 257
Query: 217 YMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNIST 276
Y N+ QK + +++ G+ T+ +EV + R++
Sbjct: 258 YCNE----------QKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVS------- 300
Query: 277 FASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMH 336
A EV ++V+S+ K + + L+ Y G++ ++R F M
Sbjct: 301 -----------EALEVLERVESKGGKV----DVVACNTLVKGYCALGKMRVAQRFFIEME 345
Query: 337 QK----NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLV 392
+K NV ++ +I GY G D AL+ F M+ + + NF TF + + + G
Sbjct: 346 RKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTD-AIRWNFATFNTLIRGLSIGGRT 404
Query: 393 DKGLEIFQSMENEYKVK-PRMEHYACVVDLLGRAGRLNQAWEFVMRM 438
D GL+I + M++ V R++ Y CV+ + R A EF+++M
Sbjct: 405 DDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKM 451
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/446 (21%), Positives = 188/446 (42%), Gaps = 84/446 (18%)
Query: 104 MIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMIL-------KASTSTS------GRN 150
++ Y ++ +++ LV +++ G + D TF+ ++ KAS + + R
Sbjct: 161 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
Query: 151 VAP-LGDLGRIVHVQILKADVD-------------VEKDDVLCTALTDSYVKNGRIAYAR 196
P L G +V+ + D D +E D V+ + DS K + A
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 280
Query: 197 TVFDVMSEK----NVISSTSLISGYMNQGLFKDAECIF----QKTVDKDIVVFNAMIEGY 248
+F M K NV++ +SLIS + G + DA + +K ++ ++V FNA+I+ +
Sbjct: 281 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 340
Query: 249 SKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGH 308
K + + ++Y DM + + P+I T+ S++ M + +Q+ ++ F
Sbjct: 341 VKEGK-FVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD 399
Query: 309 IKLGSALIDMYSKCGRVVDSRRVFDHMHQK------------------------------ 338
+ + LI + K RV D +F M +
Sbjct: 400 VVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 459
Query: 339 ---------NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHA 389
++ +++ ++DG NG ++ALE+F MQ + + + + + + A
Sbjct: 460 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ-KSEIKLDIYIYTTMIEGMCKA 518
Query: 390 GLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPER---PNSDV 446
G VD G ++F S+ + VKP + Y ++ L L +A+ + +M E PNS
Sbjct: 519 GKVDDGWDLFCSLSLK-GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 577
Query: 447 WAALLSSCRLHGNTEMAKLAASELFK 472
+ L+ + G+ K A++EL +
Sbjct: 578 YNTLIRAHLRDGD----KAASAELIR 599
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 121/287 (42%), Gaps = 18/287 (6%)
Query: 238 IVVFNAMIEGYSKTSECATRSLEVYID----MQRLNFRPNISTFASIIGACSMVAAFEVG 293
IV FN ++ +K + +V I MQRL + T+ +I + +
Sbjct: 85 IVEFNKLLSAIAKM-----KKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLA 139
Query: 294 QQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHM----HQKNVFSWTSMIDG 349
+ ++MK + I S+L++ Y R+ D+ + D M ++ + ++T++I G
Sbjct: 140 LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 199
Query: 350 YGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVK 409
+ EA+ L +M ++ G PN VT+ ++ G D L + ME K++
Sbjct: 200 LFLHNKASEAVALVDRM-VQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAA-KIE 257
Query: 410 PRMEHYACVVDLLGRAGRLNQAWEFVMRMPE---RPNSDVWAALLSSCRLHGNTEMAKLA 466
+ + ++D L + ++ A M RPN +++L+S +G A
Sbjct: 258 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 317
Query: 467 ASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGISKD 513
S++ + N + AL + K+ +L + M +R I D
Sbjct: 318 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 111/481 (23%), Positives = 202/481 (41%), Gaps = 77/481 (16%)
Query: 98 LSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDL 157
+SA+ +++ A +G+V ++L R ++ G ++ + + +LK G +V +
Sbjct: 217 VSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLK------GLSVDQIEVA 270
Query: 158 GRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNV----ISSTSL 213
R++ L D + V L + + K G + A +F VM ++ + I+ ++L
Sbjct: 271 SRLLS---LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTL 327
Query: 214 ISGYMNQGLFKDAECIFQKTVDK----DIVVFNAMIEGYSKTSECATRSLEVYIDMQRLN 269
I GY G+ +F + + K D+VVF++ I+ Y K+ + AT S+ VY M
Sbjct: 328 IDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASV-VYKRMLCQG 386
Query: 270 FRPNISTFASII-GACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDS 328
PN+ T+ +I G C +E + Q++K I S+LID + KCG +
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYE-AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 329 RRVFDHMHQK---------------------------------------NVFSWTSMIDG 349
+++ M + NV + S+IDG
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Query: 350 YGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSA-------CAHAGLVDKGLEIFQSM 402
+ + DEAL++F+ M I YG+ P+ TF + + C H GL++F M
Sbjct: 506 WCRLNRFDEALKVFRLMGI-YGIKPDVATFTTVMRVSIMEDAFCKHMKPT-IGLQLFDLM 563
Query: 403 ENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPE---RPNSDVWAALLSS-CRLHG 458
+ K+ + V+ LL + R+ A +F + E P+ + ++ C L
Sbjct: 564 QRN-KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 622
Query: 459 NTEMAKLAASELFKLNANGRPGAYVA-LSNTLAAAEKWDSVSELREVMKERGISKDTACS 517
E ++ EL K+ G + L + L D + +M E+G SK A +
Sbjct: 623 LDEAERIF--ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG-SKPNAVT 679
Query: 518 W 518
+
Sbjct: 680 Y 680
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/428 (20%), Positives = 185/428 (43%), Gaps = 66/428 (15%)
Query: 60 KTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLS----AYNYMIGAYLKQGQVE 115
+ G P+ L+ Y K L ++F K + ++ I Y+K G +
Sbjct: 314 QRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLA 373
Query: 116 ESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKD 175
+ + +R+L G + T+++++K GR G G QILK + E
Sbjct: 374 TASVVYKRMLCQGISPNVVTYTILIKG-LCQDGRIYEAFGMYG-----QILKRGM--EPS 425
Query: 176 DVLCTALTDSYVKNGRIAYARTVFDVMSE----KNVISSTSLISGYMNQGLFKDAE---- 227
V ++L D + K G + +++ M + +V+ L+ G QGL A
Sbjct: 426 IVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSV 485
Query: 228 CIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMV 287
+ +++ ++VVFN++I+G+ + + +L+V+ M +P+++TF +++ M
Sbjct: 486 KMLGQSIRLNVVVFNSLIDGWCRLNR-FDEALKVFRLMGIYGIKPDVATFTTVMRVSIME 544
Query: 288 AAF------EVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHM----HQ 337
AF +G Q+ + + I + + +I + KC R+ D+ + F+++ +
Sbjct: 545 DAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME 604
Query: 338 KNVFSWTSMIDGYGKNGFPDEALELFQKMQI----------------------------- 368
++ ++ +MI GY DEA +F+ +++
Sbjct: 605 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 664
Query: 369 -----EYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLG 423
E G PN VT+ + + + ++ ++F+ M+ E + P + Y+ ++D L
Sbjct: 665 FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQ-EKGISPSIVSYSIIIDGLC 723
Query: 424 RAGRLNQA 431
+ GR+++A
Sbjct: 724 KRGRVDEA 731
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 169/394 (42%), Gaps = 41/394 (10%)
Query: 54 IHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDL----RDKTLSAYNYMIGAYL 109
++ ILK G P+ L+ + KC LR +++D+ + Y ++
Sbjct: 413 MYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLS 472
Query: 110 KQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKAD 169
KQG + ++ ++L +L+ F+ ++ + + A + R++ + +K D
Sbjct: 473 KQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL--KVFRLMGIYGIKPD 530
Query: 170 VDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFK----- 224
V + + + D++ K+ + +FD+M ++N IS+ + + LFK
Sbjct: 531 VATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLM-QRNKISADIAVCNVVIHLLFKCHRIE 589
Query: 225 DAECIFQKTVD----KDIVVFNAMIEGYSKTSECATRSLE----VYIDMQRLNFRPNIST 276
DA F ++ DIV +N MI GY C+ R L+ ++ ++ F PN T
Sbjct: 590 DASKFFNNLIEGKMEPDIVTYNTMICGY-----CSLRRLDEAERIFELLKVTPFGPNTVT 644
Query: 277 FASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMH 336
+I + ++ S + + + L+D +SK + S ++F+ M
Sbjct: 645 LTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQ 704
Query: 337 QK----NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSA-CAHAGL 391
+K ++ S++ +IDG K G DEA +F + I+ ++P+ V + + C L
Sbjct: 705 EKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ-AIDAKLLPDVVAYAILIRGYCKVGRL 763
Query: 392 VDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRA 425
V+ L + N VKP DLL RA
Sbjct: 764 VEAALLYEHMLRN--GVKPD--------DLLQRA 787
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 157/317 (49%), Gaps = 22/317 (6%)
Query: 98 LSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDL 157
L YN +I + ++ Q+ +L L+ +++ G + T S +L G+ ++ D
Sbjct: 120 LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCH--GKRIS---DA 174
Query: 158 GRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEK----NVISSTSL 213
+V + ++ D + T L + + + A + D M ++ N+++ +
Sbjct: 175 VALVDQMV---EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 214 ISGYMNQGLFKDAECIFQK----TVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLN 269
++G +G A + K ++ ++V+++ +I+ K +L ++ +M+
Sbjct: 232 VNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRH-EDDALNLFTEMENKG 290
Query: 270 FRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSR 329
RPN+ T++S+I + ++ S +++ ++ +ALID + K G++V++
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE 350
Query: 330 RVFDHMHQK----NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSA 385
+++D M ++ ++F+++S+I+G+ + DEA +F+ M I PN VT+ + ++
Sbjct: 351 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM-ISKDCFPNVVTYNTLING 409
Query: 386 CAHAGLVDKGLEIFQSM 402
A +D+G+E+F+ M
Sbjct: 410 FCKAKRIDEGVELFREM 426
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/411 (20%), Positives = 173/411 (42%), Gaps = 77/411 (18%)
Query: 104 MIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMIL-------KASTSTS------GRN 150
++ Y ++ +++ LV +++ G + D TF+ ++ KAS + + R
Sbjct: 161 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
Query: 151 VAP-LGDLGRIVHVQILKADVD-------------VEKDDVLCTALTDSYVKNGRIAYAR 196
P L G +V+ + D+D +E + V+ + + DS K A
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 280
Query: 197 TVFDVMSEK----NVISSTSLISGYMNQGLFKDAECIF----QKTVDKDIVVFNAMIEGY 248
+F M K NVI+ +SLIS N + DA + ++ ++ ++V FNA+I+ +
Sbjct: 281 NLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAF 340
Query: 249 SKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGH 308
K + + ++Y +M + + P+I T++S+I M + + + ++ F +
Sbjct: 341 VKEGK-LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 399
Query: 309 IKLGSALIDMYSKCGRVVDSRRVFDHMHQK------------------------------ 338
+ + LI+ + K R+ + +F M Q+
Sbjct: 400 VVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 459
Query: 339 ---------NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHA 389
N+ ++ +++DG KNG ++A+ +F+ +Q + P T+ + A
Sbjct: 460 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ-RSKMEPTIYTYNIMIEGMCKA 518
Query: 390 GLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPE 440
G V+ G ++F S+ + VKP + Y ++ R G +A +M E
Sbjct: 519 GKVEDGWDLFCSLSLK-GVKPDVIIYNTMISGFCRKGLKEEADALFRKMRE 568
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 112/257 (43%), Gaps = 11/257 (4%)
Query: 265 MQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGR 324
MQRL N+ T+ +I + + + ++MK + I S+L++ Y R
Sbjct: 111 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 325 VVDSRRVFDHM----HQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFL 380
+ D+ + D M ++ + ++T++I G + EA+ L +M ++ G PN VT+
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM-VQRGCQPNLVTYG 229
Query: 381 SALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPE 440
++ G +D + ME K++ + Y+ V+D L + + A M
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKMEAA-KIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 288
Query: 441 ---RPNSDVWAALLSS-CRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWD 496
RPN +++L+S C ++ ++L S++ + N + AL + K
Sbjct: 289 KGVRPNVITYSSLISCLCNYERWSDASRL-LSDMIERKINPNVVTFNALIDAFVKEGKLV 347
Query: 497 SVSELREVMKERGISKD 513
+L + M +R I D
Sbjct: 348 EAEKLYDEMIKRSIDPD 364
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 138/304 (45%), Gaps = 24/304 (7%)
Query: 149 RNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVI 208
RN + +G L V + + + + + + + V+ G I YA VFD MS + V+
Sbjct: 155 RNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVV 214
Query: 209 SSTS----LISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSEC----ATRSLE 260
+S ++ G G ++A+ + + + NA T+ C R++
Sbjct: 215 PDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCT-LILTALCENGLVNRAIW 273
Query: 261 VYIDMQRLNFRPNISTFASII-GAC---SMVAAFEVGQQVQSQLMKTPFFGHIKLGSALI 316
+ M L F+PN+ F S+I G C S+ AFE+ +++ K + H +ALI
Sbjct: 274 YFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTH----TALI 329
Query: 317 DMYSKCGRVVDSRRVFDHM-----HQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYG 371
D K G + R+F + ++ NV ++TSMI GY K + A LF +M+ E G
Sbjct: 330 DGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMK-EQG 388
Query: 372 VVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQA 431
+ PN T+ + ++ AG + E+ M +E P + Y +D L + R +A
Sbjct: 389 LFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDE-GFMPNIYTYNAAIDSLCKKSRAPEA 447
Query: 432 WEFV 435
+E +
Sbjct: 448 YELL 451
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 88/466 (18%), Positives = 192/466 (41%), Gaps = 58/466 (12%)
Query: 62 GFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTL----SAYNYMIGAYLKQGQVEES 117
G P++ +L + ++ + YA VFD++ + + S+Y M+ + G+++E+
Sbjct: 177 GLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEA 236
Query: 118 LGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDV 177
+ ++ G D T ++IL
Sbjct: 237 DRWLTGMIQRGFIPDNATCTLIL------------------------------------- 259
Query: 178 LCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTV--- 234
TAL ++ + N I Y R + D+ + N+I+ TSLI G +G K A + ++ V
Sbjct: 260 --TALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNG 317
Query: 235 -DKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLN-FRPNISTFASIIGACSMVAAFEV 292
++ A+I+G K ++ +++ + R + ++PN+ T+ S+IG
Sbjct: 318 WKPNVYTHTALIDGLCKRGW-TEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNR 376
Query: 293 GQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQK----NVFSWTSMID 348
+ + S++ + F ++ + LI+ + K G + + + M + N++++ + ID
Sbjct: 377 AEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAID 436
Query: 349 GYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKV 408
K EA EL K G+ + VT+ + +++ L F M N+
Sbjct: 437 SLCKKSRAPEAYELLNK-AFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRM-NKTGF 494
Query: 409 KPRMEHYACVVDLLGRAGRLNQA---WEFVMRMPERPNSDVWAALLSSCRLHGNTEMAKL 465
+ M ++ R ++ ++ ++ V+ + P + + +++S G+ ++A
Sbjct: 495 EADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALK 554
Query: 466 AASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVMKERGIS 511
+ + Y +L + L D +L E M +RG+S
Sbjct: 555 YFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLS 600
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 110/482 (22%), Positives = 194/482 (40%), Gaps = 81/482 (16%)
Query: 50 SGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLR----DKTLSAYNYMI 105
S ++ + K G VPN+ I L+ KCN + A Q+ +++ +N +I
Sbjct: 235 SALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVI 294
Query: 106 GAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVA-------PLGDL- 157
K ++ E+ +V R+L+ G D T+ ++ + A P ++
Sbjct: 295 LGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIV 354
Query: 158 ------------GRIVHVQILKADVDVEKDDV--LCT--ALTDSYVKNGRIAYARTVFDV 201
GR+ + + +D+ V +CT +L Y K G + A V
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414
Query: 202 MSEK----NVISSTSLISGYMNQGLFKDAECIFQKT----VDKDIVVFNAMIEGYSKTSE 253
M K NV S T L+ G+ G +A + + + + V FN +I + K
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 254 CATRSLEVYIDMQRLNFRPNISTFASII-GACS-------------MVAAFEVGQQVQSQ 299
++E++ +M R +P++ TF S+I G C M++ V V
Sbjct: 475 -IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 533
Query: 300 LMKTPFF--GHIKLG-------------------SALIDMYSKCGRVVDSRRVFDHM--- 335
+ F G IK ++LI + G V +R +F+ M
Sbjct: 534 TLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 593
Query: 336 -HQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDK 394
H + S +I+G ++G +EA+E FQK + G P+ VTF S ++ AG ++
Sbjct: 594 GHAPSNISCNILINGLCRSGMVEEAVE-FQKEMVLRGSTPDIVTFNSLINGLCRAGRIED 652
Query: 395 GLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPER---PNSDVWAALL 451
GL +F+ ++ E + P + ++ L + G + A + E PN W+ LL
Sbjct: 653 GLTMFRKLQAE-GIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILL 711
Query: 452 SS 453
S
Sbjct: 712 QS 713
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 112/239 (46%), Gaps = 13/239 (5%)
Query: 239 VVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASII-GACSMVAAFEVGQQVQ 297
V++ +I SK + +L++ +M + P+ TF +I G C E + V
Sbjct: 253 VIYQTLIHSLSKCNR-VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVN 311
Query: 298 SQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNVFSWTSMIDGYGKNGFPD 357
L++ I G L++ K GRV ++ +F + + + + ++I G+ +G D
Sbjct: 312 RMLIRGFAPDDITYG-YLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLD 370
Query: 358 EALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYAC 417
+A + M YG+VP+ T+ S + GLV LE+ M N+ KP + Y
Sbjct: 371 DAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK-GCKPNVYSYTI 429
Query: 418 VVDLLGRAGRLNQAWEFVMRMPE---RPNSDVWAALLSS-CRLHGNTEMAKLAASELFK 472
+VD + G++++A+ + M +PN+ + L+S+ C+ H E A E+F+
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPE-----AVEIFR 483
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 164/355 (46%), Gaps = 23/355 (6%)
Query: 97 TLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGD 156
TL N ++ G+V +++ L+ R++ +G + + T+ +LK SG+ +
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKV-MCKSGQTALAMEL 234
Query: 157 LGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEK----NVISSTS 212
L ++ +I + D V + + D K+G + A +F+ M K ++I T+
Sbjct: 235 LRKMEERKI-------KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287
Query: 213 LISGYMNQGLFKDAECIFQKTVDK----DIVVFNAMIEGYSKTSECATRSLEVYIDMQRL 268
LI G+ G + D + + + + D+V F+A+I+ + K + + E++ +M +
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGK-LREAEELHKEMIQR 346
Query: 269 NFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDS 328
P+ T+ S+I + + ++ +I+ + LI+ Y K + D
Sbjct: 347 GISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDG 406
Query: 329 RRVFDHMHQKNV----FSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALS 384
+F M + V ++ ++I G+ + G + A ELFQ+M + V P+ V++ L
Sbjct: 407 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM-VSRRVRPDIVSYKILLD 465
Query: 385 ACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMP 439
G +K LEIF+ +E K++ + Y ++ + A +++ AW+ +P
Sbjct: 466 GLCDNGEPEKALEIFEKIEKS-KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 519
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 180/389 (46%), Gaps = 41/389 (10%)
Query: 100 AYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGR 159
Y ++ K GQ ++ L+R++ KLD +S+I+ + A +L
Sbjct: 214 TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF--NLFN 271
Query: 160 IVHVQILKADVDVEKDDVLCTALTDSYVKNGRIA-YARTVFDVMSEK---NVISSTSLIS 215
+ ++ KAD+ ++ T L + GR A+ + D++ K +V++ ++LI
Sbjct: 272 EMEIKGFKADI------IIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALID 325
Query: 216 GYMNQGLFKDAECI----FQKTVDKDIVVFNAMIEGYSKTSEC--ATRSLEVYIDMQRLN 269
++ +G ++AE + Q+ + D V + ++I+G+ K ++ A L++ +
Sbjct: 326 CFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK---G 382
Query: 270 FRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSR 329
PNI TF +I + G ++ ++ + LI + + G++ ++
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 330 RVFDHMHQK----NVFSWTSMIDGYGKNGFPDEALELFQ-----KMQIEYGVVPNFVTFL 380
+F M + ++ S+ ++DG NG P++ALE+F+ KM+++ G+ N +
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIY-NII--- 498
Query: 381 SALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPE 440
+ +A VD ++F S+ + VKP ++ Y ++ L + G L++A +M E
Sbjct: 499 --IHGMCNASKVDDAWDLFCSLPLK-GVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555
Query: 441 ---RPNSDVWAALLSSCRLHGN-TEMAKL 465
PN + L+ + G+ T+ AKL
Sbjct: 556 DGHSPNGCTYNILIRAHLGEGDATKSAKL 584
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 104/250 (41%), Gaps = 9/250 (3%)
Query: 273 NISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVF 332
N+ T + +I C + +++K + S LI+ GRV ++ +
Sbjct: 106 NLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELV 165
Query: 333 DHM----HQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAH 388
D M H+ + + ++++G NG +A+ L +M +E G PN VT+ L
Sbjct: 166 DRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM-VETGFQPNEVTYGPVLKVMCK 224
Query: 389 AGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPER---PNSD 445
+G +E+ + ME E K+K Y+ ++D L + G L+ A+ M + +
Sbjct: 225 SGQTALAMELLRKME-ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII 283
Query: 446 VWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELREVM 505
++ L+ G + ++ K A+ AL + K EL + M
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
Query: 506 KERGISKDTA 515
+RGIS DT
Sbjct: 344 IQRGISPDTV 353
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/446 (21%), Positives = 189/446 (42%), Gaps = 84/446 (18%)
Query: 104 MIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMIL-------KASTSTS------GRN 150
++ Y ++ +++ LV +++ G + D TF+ ++ KAS + + R
Sbjct: 86 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 145
Query: 151 VAP-LGDLGRIVHVQILKADVD-------------VEKDDVLCTALTDSYVKNGRIAYAR 196
P L G +V+ + D+D +E D V+ + DS K + A
Sbjct: 146 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 205
Query: 197 TVFDVMSEK----NVISSTSLISGYMNQGLFKDAECIF----QKTVDKDIVVFNAMIEGY 248
+F M K NV++ +SLIS + G + DA + +K ++ ++V FNA+I+ +
Sbjct: 206 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 265
Query: 249 SKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGH 308
K + + +++ DM + + P+I T+ S+I M + +Q+ ++ F
Sbjct: 266 VKEGK-FVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 324
Query: 309 IKLGSALIDMYSKCGRVVDSRRVFDHMHQK------------------------------ 338
+ + LI + K RV D +F M +
Sbjct: 325 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 384
Query: 339 ---------NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHA 389
++ +++ ++DG NG ++ALE+F MQ + + + + + + A
Sbjct: 385 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ-KSEIKLDIYIYTTMIEGMCKA 443
Query: 390 GLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPER---PNSDV 446
G VD G ++F S+ + VKP + Y ++ L L +A+ + +M E P+S
Sbjct: 444 GKVDDGWDLFCSLSLK-GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 502
Query: 447 WAALLSSCRLHGNTEMAKLAASELFK 472
+ L+ + G+ K A++EL +
Sbjct: 503 YNTLIRAHLRDGD----KAASAELIR 524
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 110/256 (42%), Gaps = 9/256 (3%)
Query: 265 MQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGR 324
MQRL N+ T+ +I + + + ++MK + I S+L++ Y R
Sbjct: 36 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 95
Query: 325 VVDSRRVFDHM----HQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFL 380
+ D+ + D M ++ + ++T++I G + EA+ L +M ++ G PN VT+
Sbjct: 96 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM-VQRGCQPNLVTYG 154
Query: 381 SALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPE 440
++ G +D + ME K++ + + ++D L + ++ A M
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAA-KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 213
Query: 441 ---RPNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDS 497
RPN +++L+S +G A S++ + N + AL + K+
Sbjct: 214 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 273
Query: 498 VSELREVMKERGISKD 513
+L + M +R I D
Sbjct: 274 AEKLHDDMIKRSIDPD 289
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 137/323 (42%), Gaps = 44/323 (13%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSAYNYMIGAYLK 110
+ HI+K+ P +LL++++ C L RQ+FD + + ++ + ++
Sbjct: 107 AHELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIE 166
Query: 111 QGQVEESLGLVRRLLVSGEK----LDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQIL 166
G E++ L +L +K + + +LKA R+ +LG+ VH
Sbjct: 167 MGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMI--RDF----ELGKQVHALCH 220
Query: 167 KADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDA 226
K E+D L +L Y + + A V +S N ++ + ++ +G F++
Sbjct: 221 KLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEV 280
Query: 227 ECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSM 286
+ +I+M + N+S F++++ ACS
Sbjct: 281 --------------------------------IRDFIEMGNHGIKKNVSVFSNVLKACSW 308
Query: 287 VA-AFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVF-DHMHQKNVFSWT 344
V+ GQQV + +K F + LI+MY K G+V D+ +VF + +V W
Sbjct: 309 VSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWN 368
Query: 345 SMIDGYGKNGFPDEALELFQKMQ 367
+M+ Y +NG EA++L +M+
Sbjct: 369 AMVASYMQNGIYIEAIKLLYQMK 391
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
Query: 23 LQNHDFVPHSTLLSNTLQY--YINSDTPSSGQTIHSHILKTGFVPNTNISIKLLVLYLKC 80
+ NH + ++ SN L+ ++ SD SGQ +H++ +K GF + I +L+ +Y K
Sbjct: 287 MGNHGIKKNVSVFSNVLKACSWV-SDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKY 345
Query: 81 NCLRYARQVFDDLRDKT-LSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEK 130
++ A +VF +D+T +S +N M+ +Y++ G E++ L+ ++ +G K
Sbjct: 346 GKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGIK 396
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/369 (21%), Positives = 174/369 (47%), Gaps = 43/369 (11%)
Query: 101 YNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRI 160
+N ++ A +K + + + L +++ V G + D +TF++++ ++A L LG++
Sbjct: 88 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLA-LSILGKM 146
Query: 161 VHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQ 220
+ + E D V +L + + + R++ A ++ D M E GY
Sbjct: 147 LKLG-------YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE----------IGY--- 186
Query: 221 GLFKDAECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASI 280
DIV +NA+I+ KT + + + +++R RPN+ T+ ++
Sbjct: 187 --------------KPDIVAYNAIIDSLCKTKR-VNDAFDFFKEIERKGIRPNVVTYTAL 231
Query: 281 IGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQ--- 337
+ + + ++ S ++K ++ SAL+D + K G+V++++ +F+ M +
Sbjct: 232 VNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI 291
Query: 338 -KNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGL 396
++ +++S+I+G + DEA ++F M + G + + V++ + ++ A V+ G+
Sbjct: 292 DPDIVTYSSLINGLCLHDRIDEANQMFDLM-VSKGCLADVVSYNTLINGFCKAKRVEDGM 350
Query: 397 EIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPERPNS-DVWAALLSSCR 455
++F+ M V + Y ++ +AG +++A EF +M S D+W +
Sbjct: 351 KLFREMSQRGLVSNTV-TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Query: 456 LHGNTEMAK 464
L N E+ K
Sbjct: 410 LCDNGELEK 418
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 172/372 (46%), Gaps = 32/372 (8%)
Query: 53 TIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRD----KTLSAYNYMIGAY 108
+I +LK G+ P+ L+ + + N + A + D + + + AYN +I +
Sbjct: 141 SILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSL 200
Query: 109 LKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKA 168
K +V ++ + + G + + T++ ++ ++S D R++ I K
Sbjct: 201 CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS-----RWSDAARLLSDMIKKK 255
Query: 169 DVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMS----EKNVISSTSLISGYMNQGLFK 224
+ + + +AL D++VKNG++ A+ +F+ M + ++++ +SLI+G
Sbjct: 256 ---ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312
Query: 225 DAECIFQKTVDK----DIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASI 280
+A +F V K D+V +N +I G+ K ++++ +M + N T+ ++
Sbjct: 313 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKR-VEDGMKLFREMSQRGLVSNTVTYNTL 371
Query: 281 IGACSMVAAFEVGQQVQSQLMKTPFFG---HIKLGSALIDMYSKCGRVVDSRRVFDHMHQ 337
I + Q+ SQ+ FFG I + L+ G + + +F+ M +
Sbjct: 372 IQGFFQAGDVDKAQEFFSQM---DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK 428
Query: 338 K----NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVD 393
+ ++ ++T++I G K G +EA LF + ++ G+ P+ VT+ + +S GL+
Sbjct: 429 REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK-GLKPDIVTYTTMMSGLCTKGLLH 487
Query: 394 KGLEIFQSMENE 405
+ ++ M+ E
Sbjct: 488 EVEALYTKMKQE 499
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/265 (18%), Positives = 121/265 (45%), Gaps = 9/265 (3%)
Query: 258 SLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALID 317
+++++ DM + P+I F ++ A + ++V + ++ + + +I+
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 318 MYSKCGRVVDSRRVFDHM----HQKNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVV 373
+ C +V + + M ++ + + S+++G+ + +A+ L KM +E G
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM-VEIGYK 187
Query: 374 PNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWE 433
P+ V + + + + V+ + F+ +E + ++P + Y +V+ L + R + A
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK-GIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 434 FVMRMPER---PNSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLA 490
+ M ++ PN ++ALL + +G AK E+ +++ + Y +L N L
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306
Query: 491 AAEKWDSVSELREVMKERGISKDTA 515
++ D +++ ++M +G D
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVV 331
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 162/382 (42%), Gaps = 65/382 (17%)
Query: 101 YNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDLGRI 160
Y+ +I + K V+++L L + G + D FT+S + ++ L + GR
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL-----------ISCLCNYGRW 291
Query: 161 VHVQILKADV---DVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEK----NVISSTSL 213
L +D+ + + V +L D++ K G++ A +FD M ++ N+++ SL
Sbjct: 292 SDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 351
Query: 214 ISGYMNQGLFKDAECIFQKTVDKD----IVVFNAMIEGYSKTSECATRSLEVYIDMQRLN 269
I+G+ +A+ IF V KD +V +N +I G+ K + +E++ DM R
Sbjct: 352 INGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKK-VVDGMELFRDMSRRG 410
Query: 270 FRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSR 329
N T+ ++I + + Q V Q++ +I + L+D K G++ +
Sbjct: 411 LVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 470
Query: 330 RVFDHMHQK---------------------------------------NVFSWTSMIDGY 350
VF+++ + +V ++ +MI G+
Sbjct: 471 VVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGF 530
Query: 351 GKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKP 410
K G +EA LF KM+ E G +P+ T+ + + A G E+ + M + +
Sbjct: 531 CKKGLKEEAYTLFIKMK-EDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS-CRFAG 588
Query: 411 RMEHYACVVDLLGRAGRLNQAW 432
Y V D+L GRL++ +
Sbjct: 589 DASTYGLVTDML-HDGRLDKGF 609
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/432 (19%), Positives = 188/432 (43%), Gaps = 26/432 (6%)
Query: 98 LSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVAPLGDL 157
L YN MI ++ Q+ +L ++ +++ G T + +L G ++
Sbjct: 100 LYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCH--GNRIS----- 152
Query: 158 GRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEK----NVISSTSL 213
V + ++ + D V T L ++ + + A + + M K ++++ ++
Sbjct: 153 -EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV 211
Query: 214 ISGYMNQGLFKDAECIFQK----TVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLN 269
I+G +G A + K ++ D+V+++ +I+ K +L ++ +M
Sbjct: 212 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRH-VDDALNLFTEMDNKG 270
Query: 270 FRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSR 329
RP++ T++S+I + ++ S +++ ++ ++LID ++K G+++++
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330
Query: 330 RVFDHMHQK----NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSA 385
++FD M Q+ N+ ++ S+I+G+ + DEA ++F M + +P+ VT+ + ++
Sbjct: 331 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM-VSKDCLPDVVTYNTLING 389
Query: 386 CAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVMRMPE---RP 442
A V G+E+F+ M V + Y ++ +A + A +M P
Sbjct: 390 FCKAKKVVDGMELFRDMSRRGLVGNTVT-YTTLIHGFFQASDCDNAQMVFKQMVSDGVHP 448
Query: 443 NSDVWAALLSSCRLHGNTEMAKLAASELFKLNANGRPGAYVALSNTLAAAEKWDSVSELR 502
N + LL +G E A + L K Y +S + A K + +L
Sbjct: 449 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLF 508
Query: 503 EVMKERGISKDT 514
+ +G+ D
Sbjct: 509 CSLSLKGVKPDV 520
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 123/247 (49%), Gaps = 20/247 (8%)
Query: 172 VEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEK----NVISSTSLISGYMNQGLFKDAE 227
+++D V+ T L D+ KN + A V M ++ NV++ +SLI+G G DAE
Sbjct: 44 IKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAE 103
Query: 228 CIFQ----KTVDKDIVVFNAMIEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASII-G 282
K ++ +++ F+A+I+ Y+K + ++ VY M +++ PN+ T++S+I G
Sbjct: 104 RRLHEMDSKKINPNVITFSALIDAYAKRGKL-SKVDSVYKMMIQMSIDPNVFTYSSLIYG 162
Query: 283 ACSMVAAFEVGQQVQSQLMK--TPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQK-- 338
C E + + + K TP ++ S L + + K RV D ++ D M Q+
Sbjct: 163 LCMHNRVDEAIKMLDLMISKGCTP---NVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGV 219
Query: 339 --NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGL 396
N S ++I GY + G D AL +F M G++PN ++ L+ G V+K L
Sbjct: 220 AANTVSCNTLIKGYFQAGKIDLALGVFGYMT-SNGLIPNIRSYNIVLAGLFANGEVEKAL 278
Query: 397 EIFQSME 403
F+ M+
Sbjct: 279 SRFEHMQ 285
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 100/207 (48%), Gaps = 10/207 (4%)
Query: 204 EKNVISSTSLISGYMNQGLFKDAECIFQKT----VDKDIVVFNAMIEGYSKTSECATRSL 259
E ++++++SL++G+ KDA + + + +D+VV +I+ K + +L
Sbjct: 10 EPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCK-NRLVVPAL 68
Query: 260 EVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMY 319
EV M+ PN+ T++S+I ++ ++ ++ SALID Y
Sbjct: 69 EVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAY 128
Query: 320 SKCGRVVDSRRVFDHMHQ----KNVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPN 375
+K G++ V+ M Q NVF+++S+I G + DEA+++ M I G PN
Sbjct: 129 AKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLM-ISKGCTPN 187
Query: 376 FVTFLSALSACAHAGLVDKGLEIFQSM 402
VT+ + + + VD G+++ M
Sbjct: 188 VVTYSTLANGFFKSSRVDDGIKLLDDM 214
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/417 (21%), Positives = 179/417 (42%), Gaps = 55/417 (13%)
Query: 51 GQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDK----TLSAYNYMIG 106
G + + + GF P L+ LY K + A +V ++++ L Y+ MI
Sbjct: 468 GLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMIN 527
Query: 107 AYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKA--STSTSGRNVAPLGDLGRIVHVQ 164
++K + + ++ G K D ++ I+ A R + + ++ ++ H
Sbjct: 528 GFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRP 587
Query: 165 ILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFK 224
+ + + Y K+G + + VFD+M + + +G +N GL
Sbjct: 588 TTRTFMPI----------IHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLIN-GL-- 634
Query: 225 DAECIFQKTVDKDIVVFNAM-IEGYSKTSECATRSLEVYIDMQRLNFRPNISTFASIIGA 283
+ ++ ++K + + + M + G S T+ ++ Y + +G
Sbjct: 635 ----VEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY----------------ASVGD 674
Query: 284 CSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYSKCGRVVDSRRVFDHMHQKNV--- 340
AFE ++Q++ + F + AL+ K GR+ + V M +N+
Sbjct: 675 TG--KAFEYFTRLQNEGLDVDIFTY----EALLKACCKSGRMQSALAVTKEMSARNIPRN 728
Query: 341 -FSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIF 399
F + +IDG+ + G EA +L Q+M+ E GV P+ T+ S +SAC+ AG +++ +
Sbjct: 729 SFVYNILIDGWARRGDVWEAADLIQQMKKE-GVKPDIHTYTSFISACSKAGDMNRATQTI 787
Query: 400 QSMENEYKVKPRMEHYACVVDLLGRAGRLNQA---WEFVMRMPERPNSDVWAALLSS 453
+ ME VKP ++ Y ++ RA +A +E + M +P+ V+ LL+S
Sbjct: 788 EEME-ALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTS 843
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/369 (17%), Positives = 153/369 (41%), Gaps = 81/369 (21%)
Query: 73 LLVLYLKCNCLRYARQVFDDLRDKTLSA----YNYMIGAYLKQGQVEESLGLVRRLLVSG 128
++ Y + + AR+ F+ +R + ++ Y +I AY ++E+L VR++ G
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374
Query: 129 EKLDGFTFSMILKASTSTSGRNVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVK 188
++ T+S+I+ G + H + AD ++ + L S
Sbjct: 375 IEMSLVTYSVIV--------------GGFSKAGHAEA--ADYWFDEAKRIHKTLNASIY- 417
Query: 189 NGRIAYARTVFDVMSEKNVISSTSLISGYMNQGLFKDAECIFQKTVDKDIVVFNAMIEGY 248
G+I YA N+ + +L+ +G +D I +++ M++GY
Sbjct: 418 -GKIIYAHC-----QTCNMERAEALVREMEEEG------------IDAPIAIYHTMMDGY 459
Query: 249 SKTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGH 308
+ ++ + L V+ ++ F P + T+
Sbjct: 460 TMVAD-EKKGLVVFKRLKECGFTPTVVTYG------------------------------ 488
Query: 309 IKLGSALIDMYSKCGRVVDSRRVFDHMHQK----NVFSWTSMIDGYGKNGFPDEALELFQ 364
LI++Y+K G++ + V M ++ N+ +++ MI+G+ K A +F+
Sbjct: 489 -----CLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFE 543
Query: 365 KMQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGR 424
M ++ G+ P+ + + + +SA G +D+ ++ + M+ + + +P + ++ +
Sbjct: 544 DM-VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ-KLRHRPTTRTFMPIIHGYAK 601
Query: 425 AGRLNQAWE 433
+G + ++ E
Sbjct: 602 SGDMRRSLE 610
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/449 (21%), Positives = 190/449 (42%), Gaps = 50/449 (11%)
Query: 50 SGQTIHSHILKTGFVPNTNISIKLLVLYLKCNCLRYARQVFDDLRDKTLSA-----YNYM 104
+ + S ILK GFV +++I LL+ + + LR A +VFD + + A Y+ +
Sbjct: 213 AAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSIL 272
Query: 105 IGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGRNVA--------PLGD 156
I + G++EE+ GL ++ G + T+++++KA + A P G
Sbjct: 273 IHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGC 332
Query: 157 LGRI----VHVQILKADVDVEKDDVLC---------------TALTDSYVKNGRIAYART 197
+ V + L D +E+ + +C AL + Y K+GR+ A
Sbjct: 333 KPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFE 392
Query: 198 VFDVMSEK----NVISSTSLISGYMNQGLFKDAECIFQKTVDK----DIVVFNAMIEGYS 249
+ VM ++ NV + L+ G G A + ++ +D DIV +N +I+G
Sbjct: 393 LLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLC 452
Query: 250 KTSECATRSLEVYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHI 309
+ T + ++ M + P+ TF +II A +V +++
Sbjct: 453 REGHMNT-AYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDE 511
Query: 310 KLGSALIDMYSKCGRVVDSRRVFDHMHQKNVF----SWTSMIDGYGKNGFPDEALELFQK 365
G+ LID K G+ D+ + + + + + S ++D K E L + K
Sbjct: 512 VTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGK 571
Query: 366 MQIEYGVVPNFVTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRA 425
+ + G+VP+ VT+ + + +G + I + M+ P + Y +++ L +
Sbjct: 572 IN-KLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLS-GCLPNVYPYTIIINGLCQF 629
Query: 426 GRLNQAWEFVMRMPE---RPNSDVWAALL 451
GR+ +A + + M + PN + ++
Sbjct: 630 GRVEEAEKLLSAMQDSGVSPNHVTYTVMV 658
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 156/362 (43%), Gaps = 19/362 (5%)
Query: 90 FDDLRDKTLSAYNYMIGAYLKQGQVEESLGLVRRLLVSGEKLDGFTFSMILKASTSTSGR 149
FD+LR+ NY + L + LG + + + DGF MI T +
Sbjct: 147 FDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMI-DYRTIVNAL 205
Query: 150 NVAPLGDLGRIVHVQILKADVDVEKDDVLCTALTDSYVKNGRIAYARTVFDVMSEK---- 205
+ + +ILK + D + T+L + + + A VFDVMS++
Sbjct: 206 CKNGYTEAAEMFMSKILK--IGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCA 263
Query: 206 -NVISSTSLISGYMNQGLFKDA----ECIFQKTVDKDIVVFNAMIEGYSKTSECATRSLE 260
N +S + LI G G ++A + + +K + +I+ ++
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRG-LIDKAFN 322
Query: 261 VYIDMQRLNFRPNISTFASIIGACSMVAAFEVGQQVQSQLMKTPFFGHIKLGSALIDMYS 320
++ +M +PN+ T+ +I E V +++K F + +ALI+ Y
Sbjct: 323 LFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYC 382
Query: 321 KCGRVVDSRRVFDHMHQK----NVFSWTSMIDGYGKNGFPDEALELFQKMQIEYGVVPNF 376
K GRVV + + M ++ NV ++ +++G + G P +A+ L ++M ++ G+ P+
Sbjct: 383 KDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRM-LDNGLSPDI 441
Query: 377 VTFLSALSACAHAGLVDKGLEIFQSMENEYKVKPRMEHYACVVDLLGRAGRLNQAWEFVM 436
V++ + G ++ ++ SM N + ++P + +++ + G+ + A F+
Sbjct: 442 VSYNVLIDGLCREGHMNTAYKLLSSM-NCFDIEPDCLTFTAIINAFCKQGKADVASAFLG 500
Query: 437 RM 438
M
Sbjct: 501 LM 502