Miyakogusa Predicted Gene
- Lj6g3v1984610.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1984610.2 Non Chatacterized Hit- tr|I1L9D9|I1L9D9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6985
PE=,77.73,0,Cysteine proteinases,NULL; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; UCH,Peptidase C19, ubiqu,CUFF.60416.2
(630 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G22285.1 | Symbols: | Ubiquitin C-terminal hydrolases superf... 677 0.0
AT4G22350.2 | Symbols: | Ubiquitin C-terminal hydrolases superf... 676 0.0
AT4G22350.1 | Symbols: | Ubiquitin C-terminal hydrolases superf... 668 0.0
AT4G22410.1 | Symbols: | Ubiquitin C-terminal hydrolases superf... 487 e-137
AT5G22030.1 | Symbols: UBP8 | ubiquitin-specific protease 8 | ch... 62 1e-09
AT5G22030.2 | Symbols: UBP8 | ubiquitin-specific protease 8 | ch... 62 1e-09
AT2G40930.1 | Symbols: UBP5, ATUBP5, PDE323 | ubiquitin-specific... 59 1e-08
AT1G32850.1 | Symbols: UBP11 | ubiquitin-specific protease 11 | ... 57 3e-08
AT5G10790.1 | Symbols: UBP22 | ubiquitin-specific protease 22 | ... 55 1e-07
AT4G22420.1 | Symbols: | Ubiquitin-specific protease family C19... 53 8e-07
AT4G10570.1 | Symbols: UBP9 | ubiquitin-specific protease 9 | ch... 50 4e-06
AT4G30890.3 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 50 4e-06
AT4G30890.2 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 50 4e-06
AT4G30890.1 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 50 4e-06
AT4G10590.1 | Symbols: UBP10 | ubiquitin-specific protease 10 | ... 50 5e-06
AT4G10590.2 | Symbols: UBP10 | ubiquitin-specific protease 10 | ... 50 5e-06
>AT4G22285.1 | Symbols: | Ubiquitin C-terminal hydrolases
superfamily protein | chr4:11779063-11781898 REVERSE
LENGTH=541
Length = 541
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/623 (58%), Positives = 417/623 (66%), Gaps = 113/623 (18%)
Query: 22 DLRRQRVDKEEEDSSP----IANPLSGLANNYADI-----DEEEEKDAN----IQRKNDG 68
+++R+RV E DS P NPL LAN Y D +E+++ A + + +G
Sbjct: 17 EVKRKRV-MERSDSPPPPLGFNNPLLPLANTYDDDDEEEENEQKKSQARGNGVAKGEGNG 75
Query: 69 SQHNGHKYQXXXXXXXXXXXQFGGRNSRHVEVRKDCPYLDTVNRQVLDFDFEKFCSVSLS 128
++ G + + G++SRHVEVR+DCPYLDTVNRQVLDFDFE+FCSVSLS
Sbjct: 76 NKVKGEAQEEVDDDEDDDVSKGKGKHSRHVEVRRDCPYLDTVNRQVLDFDFERFCSVSLS 135
Query: 129 NLNVYACLVCGKYFQGRGRKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLDDI 188
NLNVYACLVCGKYFQGR +KSHAYTHSLEAGHHVYINL TEKVYCLPD YEINDPSLDDI
Sbjct: 136 NLNVYACLVCGKYFQGRSQKSHAYTHSLEAGHHVYINLLTEKVYCLPDSYEINDPSLDDI 195
Query: 189 RHVLNPRLTAKEVEQLDKNKQWSRALDGSSYLPGMVGLNNIKETDFVNVTIQSLMRVTPL 248
RHVLNPR + +V +LDKN+QWSRALDGS YLPGMVGLNNI++T+FVNVTIQSLMRVTPL
Sbjct: 196 RHVLNPRFSRAQVNELDKNRQWSRALDGSDYLPGMVGLNNIQKTEFVNVTIQSLMRVTPL 255
Query: 249 RNFFLIPENYQHCKSPLVQRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGAQ 308
RNFFLIPENYQHCKSPLV RFGELTRKIWHARNFKGQVS
Sbjct: 256 RNFFLIPENYQHCKSPLVHRFGELTRKIWHARNFKGQVS--------------------- 294
Query: 309 SDPVEFMSWLLNTLHADLKTSKKNMSIIYECFQGELEVVKEIPNRMIIDKKEDGEDQNNV 368
P EF L A +K SKK
Sbjct: 295 --PHEF-------LQAVMKASKK------------------------------------- 308
Query: 369 EKLSRFRIGAQSDPVEFMSWLLNTLHADLKTSKKNMSIIYECFQGELEVVKEIPNRMIID 428
RFRIG QSDPVEFMSWLLNTLH DL+TSK SII++CFQGELEVVKE
Sbjct: 309 ----RFRIGQQSDPVEFMSWLLNTLHMDLRTSKDASSIIHKCFQGELEVVKEF------- 357
Query: 429 KKEDGEDQNNVEKLSDGGTQRNAFLKETSKXXXXXXXXXXXXXXXXKDVMEKNIIPQVPL 488
Q N K E S+ KDVMEKNIIPQV L
Sbjct: 358 -------QGNENK-------------EISRMSFLMLGLDLPPPPLFKDVMEKNIIPQVAL 397
Query: 489 FNILKKFDGETVTEVVRPHIARMQYRVTRLPKYMIIHMRRFTKNNFFVEKNPTLVNFPVK 548
F++LKKFDGETVTEVVRP +ARM+YRV + P+Y++ HM RF KNNFF EKNPTLVNFPVK
Sbjct: 398 FDLLKKFDGETVTEVVRPKLARMRYRVIKSPRYLMFHMVRFKKNNFFKEKNPTLVNFPVK 457
Query: 549 NLELKDYIP-LPTPKENEKLRSKYDLIANIVHDGKPGEGVYRVFVQRKSEELWYEMQDLH 607
++EL+DYIP LP E E + SKY+LIANIVHDGKP +G +RVFVQRKS+ELWYEMQDLH
Sbjct: 458 DMELRDYIPSLPRAPEGENVCSKYNLIANIVHDGKPEDGYFRVFVQRKSQELWYEMQDLH 517
Query: 608 VSETLPHLVALSETYMQIYEQQQ 630
V+ETLP +V LSE YMQIYEQ++
Sbjct: 518 VAETLPQMVELSEAYMQIYEQEE 540
>AT4G22350.2 | Symbols: | Ubiquitin C-terminal hydrolases
superfamily protein | chr4:11804073-11806939 REVERSE
LENGTH=539
Length = 539
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/624 (58%), Positives = 415/624 (66%), Gaps = 117/624 (18%)
Query: 22 DLRRQRVDKEEEDSSP----IANPLSGLANNYADIDEEEEKD---ANIQRKNDGSQHNGH 74
+++R+RV E DS P NPL AN Y D + ++ K N+ K +G NG+
Sbjct: 17 EVKRKRV-MERSDSPPPPLGFNNPLLPFANAYDDDNNQQNKSQTRCNVVAKGEG---NGN 72
Query: 75 KYQXXXXXXXXX-------XXQFGGRNSRHVEVRKDCPYLDTVNRQVLDFDFEKFCSVSL 127
K + + G++SRHVEVR+DCPYLDTVNRQVLDFDFE+FCSVSL
Sbjct: 73 KVKGEAQVEVDDDEDDDDDASKGRGKHSRHVEVRRDCPYLDTVNRQVLDFDFERFCSVSL 132
Query: 128 SNLNVYACLVCGKYFQGRGRKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLDD 187
SNLNVYACLVCGKYFQGR +KSHAYTHSLEAGHHVYINL TEKVYCLPD YEINDPSLDD
Sbjct: 133 SNLNVYACLVCGKYFQGRSQKSHAYTHSLEAGHHVYINLLTEKVYCLPDSYEINDPSLDD 192
Query: 188 IRHVLNPRLTAKEVEQLDKNKQWSRALDGSSYLPGMVGLNNIKETDFVNVTIQSLMRVTP 247
IRHVLNPR + +V +LDKN+QWSRALDGS YLPGMVGLNNI++T+FVNVTIQSLMRVTP
Sbjct: 193 IRHVLNPRFSRAQVNELDKNRQWSRALDGSDYLPGMVGLNNIQKTEFVNVTIQSLMRVTP 252
Query: 248 LRNFFLIPENYQHCKSPLVQRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGA 307
LRNFFLIPENYQHCKSPL RFGELTRKIWHARNFKGQVS
Sbjct: 253 LRNFFLIPENYQHCKSPLGHRFGELTRKIWHARNFKGQVS-------------------- 292
Query: 308 QSDPVEFMSWLLNTLHADLKTSKKNMSIIYECFQGELEVVKEIPNRMIIDKKEDGEDQNN 367
P EF L A +K SKK
Sbjct: 293 ---PHEF-------LQAVMKASKK------------------------------------ 306
Query: 368 VEKLSRFRIGAQSDPVEFMSWLLNTLHADLKTSKKNMSIIYECFQGELEVVKEIPNRMII 427
RFRIG QSDPVEFMSWLLNTLH DL+TSK SII++CFQGELEVVKE
Sbjct: 307 -----RFRIGQQSDPVEFMSWLLNTLHMDLRTSKDASSIIHKCFQGELEVVKEY------ 355
Query: 428 DKKEDGEDQNNVEKLSDGGTQRNAFLKETSKXXXXXXXXXXXXXXXXKDVMEKNIIPQVP 487
Q N K E S+ KDVMEKNIIPQV
Sbjct: 356 --------QGNENK-------------EISRMPFLMLGLDLPPPPLFKDVMEKNIIPQVA 394
Query: 488 LFNILKKFDGETVTEVVRPHIARMQYRVTRLPKYMIIHMRRFTKNNFFVEKNPTLVNFPV 547
LF++LKKFDGETVTEVVRP +ARM+YRV + P+Y++ HM RF KNNFF EKNPTLVNFPV
Sbjct: 395 LFDLLKKFDGETVTEVVRPKLARMRYRVIKSPRYLMFHMVRFKKNNFFKEKNPTLVNFPV 454
Query: 548 KNLELKDYIP-LPTPKENEKLRSKYDLIANIVHDGKPGEGVYRVFVQRKSEELWYEMQDL 606
K++EL+DYIP LP E E + SKY+LIANIVHDGKP +G +RVFVQRKS+ELWYEMQDL
Sbjct: 455 KDMELRDYIPSLPRAPEGENVCSKYNLIANIVHDGKPEDGYFRVFVQRKSQELWYEMQDL 514
Query: 607 HVSETLPHLVALSETYMQIYEQQQ 630
HV+ETLP +V LSE YMQIYEQQ+
Sbjct: 515 HVAETLPQMVELSEAYMQIYEQQE 538
>AT4G22350.1 | Symbols: | Ubiquitin C-terminal hydrolases
superfamily protein | chr4:11804073-11806939 REVERSE
LENGTH=510
Length = 510
Score = 668 bits (1724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/540 (64%), Positives = 382/540 (70%), Gaps = 99/540 (18%)
Query: 92 GRNSRHVEVRKDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYFQGRGRKSHA 151
G++SRHVEVR+DCPYLDTVNRQVLDFDFE+FCSVSLSNLNVYACLVCGKYFQGR +KSHA
Sbjct: 68 GKHSRHVEVRRDCPYLDTVNRQVLDFDFERFCSVSLSNLNVYACLVCGKYFQGRSQKSHA 127
Query: 152 YTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLDDIRHVLNPRLTAKEVEQLDKNKQWS 211
YTHSLEAGHHVYINL TEKVYCLPD YEINDPSLDDIRHVLNPR + +V +LDKN+QWS
Sbjct: 128 YTHSLEAGHHVYINLLTEKVYCLPDSYEINDPSLDDIRHVLNPRFSRAQVNELDKNRQWS 187
Query: 212 RALDGSSYLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYQHCKSPLVQRFGE 271
RALDGS YLPGMVGLNNI++T+FVNVTIQSLMRVTPLRNFFLIPENYQHCKSPL RFGE
Sbjct: 188 RALDGSDYLPGMVGLNNIQKTEFVNVTIQSLMRVTPLRNFFLIPENYQHCKSPLGHRFGE 247
Query: 272 LTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGAQSDPVEFMSWLLNTLHADLKTSKK 331
LTRKIWHARNFKGQVS P EF L A +K SKK
Sbjct: 248 LTRKIWHARNFKGQVS-----------------------PHEF-------LQAVMKASKK 277
Query: 332 NMSIIYECFQGELEVVKEIPNRMIIDKKEDGEDQNNVEKLSRFRIGAQSDPVEFMSWLLN 391
RFRIG QSDPVEFMSWLLN
Sbjct: 278 -----------------------------------------RFRIGQQSDPVEFMSWLLN 296
Query: 392 TLHADLKTSKKNMSIIYECFQGELEVVKEIPNRMIIDKKEDGEDQNNVEKLSDGGTQRNA 451
TLH DL+TSK SII++CFQGELEVVKE Q N K
Sbjct: 297 TLHMDLRTSKDASSIIHKCFQGELEVVKEY--------------QGNENK---------- 332
Query: 452 FLKETSKXXXXXXXXXXXXXXXXKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHIARM 511
E S+ KDVMEKNIIPQV LF++LKKFDGETVTEVVRP +ARM
Sbjct: 333 ---EISRMPFLMLGLDLPPPPLFKDVMEKNIIPQVALFDLLKKFDGETVTEVVRPKLARM 389
Query: 512 QYRVTRLPKYMIIHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIP-LPTPKENEKLRSK 570
+YRV + P+Y++ HM RF KNNFF EKNPTLVNFPVK++EL+DYIP LP E E + SK
Sbjct: 390 RYRVIKSPRYLMFHMVRFKKNNFFKEKNPTLVNFPVKDMELRDYIPSLPRAPEGENVCSK 449
Query: 571 YDLIANIVHDGKPGEGVYRVFVQRKSEELWYEMQDLHVSETLPHLVALSETYMQIYEQQQ 630
Y+LIANIVHDGKP +G +RVFVQRKS+ELWYEMQDLHV+ETLP +V LSE YMQIYEQQ+
Sbjct: 450 YNLIANIVHDGKPEDGYFRVFVQRKSQELWYEMQDLHVAETLPQMVELSEAYMQIYEQQE 509
>AT4G22410.1 | Symbols: | Ubiquitin C-terminal hydrolases
superfamily protein | chr4:11818213-11820135 REVERSE
LENGTH=340
Length = 340
Score = 487 bits (1253), Expect = e-137, Method: Compositional matrix adjust.
Identities = 260/433 (60%), Positives = 283/433 (65%), Gaps = 98/433 (22%)
Query: 110 VNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYFQGRGRKSHAYTHSLEAGHHVYINLRTE 169
V QVLDF FE+FCSVSLSNLNVYACLVCGKYFQGR +KSHAYTHSLEAGHHVYINL TE
Sbjct: 2 VEFQVLDFHFERFCSVSLSNLNVYACLVCGKYFQGRSQKSHAYTHSLEAGHHVYINLLTE 61
Query: 170 KVYCLPDGYEINDPSLDDIRHVLNPRLTAKEVEQLDKNKQWSRALDGSSYLPGMVGLNNI 229
KVYCLPD YEINDPSLDDIRHVLNPR + +V +LDKN+QWSRALDGS YLPGMVGLNNI
Sbjct: 62 KVYCLPDSYEINDPSLDDIRHVLNPRFSRAQVNELDKNRQWSRALDGSDYLPGMVGLNNI 121
Query: 230 KETDFVNVTIQSLMRVTPLRNFFLIPENYQHCKSPLVQRFGELTRKIWHARNFKGQVSPH 289
++T+FVNVTIQSLMRVTPLRNFF IPENYQHCKSPLV FGELTRKIWHARNFKGQVS
Sbjct: 122 QKTEFVNVTIQSLMRVTPLRNFFHIPENYQHCKSPLVHCFGELTRKIWHARNFKGQVS-- 179
Query: 290 EFLQAVMKASKKRFRIGAQSDPVEFMSWLLNTLHADLKTSKKNMSIIYECFQGELEVVKE 349
P EF L A +K SKK
Sbjct: 180 ---------------------PHEF-------LQAVMKASKK------------------ 193
Query: 350 IPNRMIIDKKEDGEDQNNVEKLSRFRIGAQSDPVEFMSWLLNTLHADLKTSKKNMSIIYE 409
RFRIG QSDPVEFMSWLLNTLH DL+TSK SII++
Sbjct: 194 -----------------------RFRIGQQSDPVEFMSWLLNTLHMDLRTSKDASSIIHK 230
Query: 410 CFQGELEVVKEIPNRMIIDKKEDGEDQNNVEKLSDGGTQRNAFLKETSKXXXXXXXXXXX 469
CFQGELEVVKE G + KE S+
Sbjct: 231 CFQGELEVVKEF----------QGNEN-----------------KEISRMSFLMLGLDLP 263
Query: 470 XXXXXKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHIARMQYRVTRLPKYMIIHMRRF 529
KDVMEKNIIPQV LF++LKKFDGETVTEVVRP +ARM+YRV + P+Y++ HM RF
Sbjct: 264 PPPLFKDVMEKNIIPQVALFDLLKKFDGETVTEVVRPKLARMRYRVIKSPRYLMFHMVRF 323
Query: 530 TKNNFFVEKNPTL 542
KNNFF EKNPTL
Sbjct: 324 KKNNFFKEKNPTL 336
>AT5G22030.1 | Symbols: UBP8 | ubiquitin-specific protease 8 |
chr5:7290155-7296344 REVERSE LENGTH=913
Length = 913
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 517 RLPKYMIIHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIAN 576
RLP+ ++IH++RF+ + F K V+FP+ NL+L YI +N + +Y L A
Sbjct: 804 RLPEILVIHLKRFSYSRFMKNKLEAYVDFPLDNLDLSSYISY----KNGQTTYRYMLYAI 859
Query: 577 IVHDGKPGEGVYRVFVQRKSEELWYEMQDLHVSETLPHLVALSETYMQIYEQ 628
H G G G Y +V + WY+ D HV + + S Y+ Y++
Sbjct: 860 SNHYGSMGGGHYTAYVHHGGDR-WYDFDDSHVHQISQEKIKTSAAYVLFYKR 910
>AT5G22030.2 | Symbols: UBP8 | ubiquitin-specific protease 8 |
chr5:7290155-7296344 REVERSE LENGTH=913
Length = 913
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 517 RLPKYMIIHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIAN 576
RLP+ ++IH++RF+ + F K V+FP+ NL+L YI +N + +Y L A
Sbjct: 804 RLPEILVIHLKRFSYSRFMKNKLEAYVDFPLDNLDLSSYISY----KNGQTTYRYMLYAI 859
Query: 577 IVHDGKPGEGVYRVFVQRKSEELWYEMQDLHVSETLPHLVALSETYMQIYEQ 628
H G G G Y +V + WY+ D HV + + S Y+ Y++
Sbjct: 860 SNHYGSMGGGHYTAYVHHGGDR-WYDFDDSHVHQISQEKIKTSAAYVLFYKR 910
>AT2G40930.1 | Symbols: UBP5, ATUBP5, PDE323 | ubiquitin-specific
protease 5 | chr2:17076714-17082192 REVERSE LENGTH=924
Length = 924
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Query: 517 RLPKYMIIHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIAN 576
RLP+ ++IH++RF+ + K T VNFP+ +L+L Y+ +N Y+L A
Sbjct: 808 RLPEVLVIHLKRFSYSRSMKHKLETFVNFPIHDLDLTKYV----ANKNLSQPQLYELYAL 863
Query: 577 IVHDGKPGEGVYRVFVQRKSEELWYEMQDLHVSETLPHLVALSETYMQIYEQQ 629
H G G G Y ++ + WY D H+S V Y+ Y ++
Sbjct: 864 TNHYGGMGSGHYTAHIKLLDDSRWYNFDDSHISHINEDDVKSGAAYVLFYRRK 916
>AT1G32850.1 | Symbols: UBP11 | ubiquitin-specific protease 11 |
chr1:11902629-11906900 FORWARD LENGTH=892
Length = 892
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 14/119 (11%)
Query: 222 GMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYQ---HCKSPLVQR------FGEL 272
G+ GL N+ T F+N T+Q L P+ +FL ++Y+ + K+PL R FGEL
Sbjct: 299 GLGGLQNLGNTCFMNSTLQCLAHTPPIVEYFL--QDYRSDINAKNPLGMRGELAIAFGEL 356
Query: 273 TRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGAQSDPVEFMSWLLNTLHADLKTSKK 331
RK+W + + V+P F + + + + F Q D E +++LL+ LH DL K+
Sbjct: 357 LRKLWSSG--QNTVAPRAFKTKLARFAPQ-FSGYNQHDSQEMLAFLLDGLHEDLNKVKR 412
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 517 RLPKYMIIHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSK-YDLIA 575
+LP ++ H++RFT + +F K TLVNF + +L+L Y+ +NE +S Y+L A
Sbjct: 773 KLPDILVFHLKRFTYSRYFKNKIDTLVNFHIHDLDLSKYV------KNEDGQSYLYELYA 826
Query: 576 NIVHDGKPGEGVYRVFVQRKSEELWYEMQDLHVSETLPHLVALSETYMQIYEQ 628
H G G G Y + + E WY D VS + S Y+ Y++
Sbjct: 827 ISNHYGGLGGGHYTAYAKLMDETKWYNFDDSRVSAVNESEIKTSAAYVLFYQR 879
>AT5G10790.1 | Symbols: UBP22 | ubiquitin-specific protease 22 |
chr5:3410638-3412559 FORWARD LENGTH=557
Length = 557
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 37/171 (21%)
Query: 110 VNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYFQGRGRKSHAYTHS-LEAGHHVYINLRT 168
+ Q +D +CSV L Y CL+C + SH H+ L GH + I++
Sbjct: 46 IKLQGIDIPRCSYCSVYQKRL--YICLIC----RSISCSSHILLHTQLNKGHDIAIDVER 99
Query: 169 EKVYCLPDGYEINDPSLDDIRHVLNPRL--------TAKEVEQLDKNKQWSRALD----- 215
++YC ++ D D++ V++ +L + +V + NK+ R LD
Sbjct: 100 SELYCCACIDQVYDSEFDEV--VVSKQLFGLGMSVKSGADVVAVRSNKK--RRLDSQLII 155
Query: 216 GSSYLP-------------GMVGLNNIKETDFVNVTIQSLMRVTPLRNFFL 253
GS++L G+ GLNN+ T F+N +Q+L+ PLRNF+L
Sbjct: 156 GSNFLVSPRDRREKWTFPLGLRGLNNLGSTCFMNAVLQALVHAPPLRNFWL 206
>AT4G22420.1 | Symbols: | Ubiquitin-specific protease family
C19-related protein | chr4:11825614-11826432 REVERSE
LENGTH=184
Length = 184
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 8/66 (12%)
Query: 92 GRNSRHVEVRKDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYFQGRGRKSHA 151
G++SRHVEVR+DCPYLDTVNRQV+ D V L+ + K + GRK+ A
Sbjct: 120 GKHSRHVEVRRDCPYLDTVNRQVIIIDQFLMLRVPLATMR--------KRMRTGGRKAKA 171
Query: 152 YTHSLE 157
L+
Sbjct: 172 MEKYLK 177
>AT4G10570.1 | Symbols: UBP9 | ubiquitin-specific protease 9 |
chr4:6523657-6528058 REVERSE LENGTH=923
Length = 923
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 5/112 (4%)
Query: 517 RLPKYMIIHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIAN 576
+LP ++ H++RFT + + K T VNFPV +L+L Y+ K Y+L A
Sbjct: 788 KLPDILVFHLKRFTYSRYLKNKIDTFVNFPVHDLDLSKYV-----KNKNGQSYLYELYAV 842
Query: 577 IVHDGKPGEGVYRVFVQRKSEELWYEMQDLHVSETLPHLVALSETYMQIYEQ 628
H G G G Y + + + WY D HVS + S Y+ Y +
Sbjct: 843 SNHYGGLGGGHYTAYAKLIDDNKWYHFDDSHVSSVNESEIRNSAAYVLFYRR 894
>AT4G30890.3 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 9/122 (7%)
Query: 509 ARMQYRVTRLPKYMIIHMRRFTKNNFFVEKNPTLVNFPVK-NLELKDYIPLPTPKENEKL 567
A ++ +L K MI+H+ RF+ + K V FP++ NL + L NE L
Sbjct: 436 ASKSIKIQKLSKIMILHLMRFSYGSQGSTKLRKGVKFPLELNLNRSHLVSL----SNESL 491
Query: 568 RSKYDLIANIVHDG-KPGEGVYRVFVQRKSEELWYEMQDLHVSETLPHLVALSETYMQIY 626
R Y+L+A I H G P +G Y +RK+ + W D V+ LV + Y+ Y
Sbjct: 492 R--YELVATITHHGWDPSKGHYTTDARRKNGQ-WLRFDDASVTPIGTKLVLHDQAYVLFY 548
Query: 627 EQ 628
+Q
Sbjct: 549 KQ 550
>AT4G30890.2 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 9/122 (7%)
Query: 509 ARMQYRVTRLPKYMIIHMRRFTKNNFFVEKNPTLVNFPVK-NLELKDYIPLPTPKENEKL 567
A ++ +L K MI+H+ RF+ + K V FP++ NL + L NE L
Sbjct: 436 ASKSIKIQKLSKIMILHLMRFSYGSQGSTKLRKGVKFPLELNLNRSHLVSL----SNESL 491
Query: 568 RSKYDLIANIVHDG-KPGEGVYRVFVQRKSEELWYEMQDLHVSETLPHLVALSETYMQIY 626
R Y+L+A I H G P +G Y +RK+ + W D V+ LV + Y+ Y
Sbjct: 492 R--YELVATITHHGWDPSKGHYTTDARRKNGQ-WLRFDDASVTPIGTKLVLHDQAYVLFY 548
Query: 627 EQ 628
+Q
Sbjct: 549 KQ 550
>AT4G30890.1 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 9/122 (7%)
Query: 509 ARMQYRVTRLPKYMIIHMRRFTKNNFFVEKNPTLVNFPVK-NLELKDYIPLPTPKENEKL 567
A ++ +L K MI+H+ RF+ + K V FP++ NL + L NE L
Sbjct: 436 ASKSIKIQKLSKIMILHLMRFSYGSQGSTKLRKGVKFPLELNLNRSHLVSL----SNESL 491
Query: 568 RSKYDLIANIVHDG-KPGEGVYRVFVQRKSEELWYEMQDLHVSETLPHLVALSETYMQIY 626
R Y+L+A I H G P +G Y +RK+ + W D V+ LV + Y+ Y
Sbjct: 492 R--YELVATITHHGWDPSKGHYTTDARRKNGQ-WLRFDDASVTPIGTKLVLHDQAYVLFY 548
Query: 627 EQ 628
+Q
Sbjct: 549 KQ 550
>AT4G10590.1 | Symbols: UBP10 | ubiquitin-specific protease 10 |
chr4:6538919-6543272 REVERSE LENGTH=910
Length = 910
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 5/112 (4%)
Query: 517 RLPKYMIIHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIAN 576
+LP ++ H++RFT + + K T VNFPV +L+L Y+ K Y+L A
Sbjct: 787 KLPDILVFHLKRFTYSRYLKNKIDTFVNFPVHDLDLSKYV-----KNKNDQSYLYELYAV 841
Query: 577 IVHDGKPGEGVYRVFVQRKSEELWYEMQDLHVSETLPHLVALSETYMQIYEQ 628
H G G G Y + + + WY D HVS + S Y+ Y +
Sbjct: 842 SNHYGGLGGGHYTAYAKLIDDNEWYHFDDSHVSSVNESEIKNSAAYVLFYRR 893
>AT4G10590.2 | Symbols: UBP10 | ubiquitin-specific protease 10 |
chr4:6538919-6543272 REVERSE LENGTH=910
Length = 910
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 5/112 (4%)
Query: 517 RLPKYMIIHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIAN 576
+LP ++ H++RFT + + K T VNFPV +L+L Y+ K Y+L A
Sbjct: 787 KLPDILVFHLKRFTYSRYLKNKIDTFVNFPVHDLDLSKYV-----KNKNDQSYLYELYAV 841
Query: 577 IVHDGKPGEGVYRVFVQRKSEELWYEMQDLHVSETLPHLVALSETYMQIYEQ 628
H G G G Y + + + WY D HVS + S Y+ Y +
Sbjct: 842 SNHYGGLGGGHYTAYAKLIDDNEWYHFDDSHVSSVNESEIKNSAAYVLFYRR 893