Miyakogusa Predicted Gene
- Lj6g3v1984610.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1984610.1 Non Chatacterized Hit- tr|I1L9D9|I1L9D9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6985
PE=,88.27,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
UCH,Peptidase C19, ubiquitin carboxyl-terminal hydr,CUFF.60416.1
(559 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G22285.1 | Symbols: | Ubiquitin C-terminal hydrolases superf... 728 0.0
AT4G22350.2 | Symbols: | Ubiquitin C-terminal hydrolases superf... 728 0.0
AT4G22350.1 | Symbols: | Ubiquitin C-terminal hydrolases superf... 720 0.0
AT4G22410.1 | Symbols: | Ubiquitin C-terminal hydrolases superf... 539 e-153
AT5G22030.1 | Symbols: UBP8 | ubiquitin-specific protease 8 | ch... 62 1e-09
AT5G22030.2 | Symbols: UBP8 | ubiquitin-specific protease 8 | ch... 62 1e-09
AT2G40930.1 | Symbols: UBP5, ATUBP5, PDE323 | ubiquitin-specific... 58 1e-08
AT1G32850.1 | Symbols: UBP11 | ubiquitin-specific protease 11 | ... 57 3e-08
AT5G10790.1 | Symbols: UBP22 | ubiquitin-specific protease 22 | ... 55 1e-07
AT4G22420.1 | Symbols: | Ubiquitin-specific protease family C19... 53 7e-07
AT4G10570.1 | Symbols: UBP9 | ubiquitin-specific protease 9 | ch... 50 4e-06
AT4G30890.3 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 50 5e-06
AT4G30890.2 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 50 5e-06
AT4G30890.1 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 50 5e-06
AT4G10590.1 | Symbols: UBP10 | ubiquitin-specific protease 10 | ... 50 5e-06
AT4G10590.2 | Symbols: UBP10 | ubiquitin-specific protease 10 | ... 50 5e-06
>AT4G22285.1 | Symbols: | Ubiquitin C-terminal hydrolases
superfamily protein | chr4:11779063-11781898 REVERSE
LENGTH=541
Length = 541
Score = 728 bits (1879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/552 (67%), Positives = 421/552 (76%), Gaps = 42/552 (7%)
Query: 22 DLRRQRVDKEEEDSSP----IANPLSGLANNYADI-----DEEEEKDAN----IQRKNDG 68
+++R+RV E DS P NPL LAN Y D +E+++ A + + +G
Sbjct: 17 EVKRKRV-MERSDSPPPPLGFNNPLLPLANTYDDDDEEEENEQKKSQARGNGVAKGEGNG 75
Query: 69 SQHNGHKYQXXXXXXXXXXXQFGGRNSRHVEVRKDCPYLDTVNRQVLDFDFEKFCSVSLS 128
++ G + + G++SRHVEVR+DCPYLDTVNRQVLDFDFE+FCSVSLS
Sbjct: 76 NKVKGEAQEEVDDDEDDDVSKGKGKHSRHVEVRRDCPYLDTVNRQVLDFDFERFCSVSLS 135
Query: 129 NLNVYACLVCGKYFQGRGRKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLDDI 188
NLNVYACLVCGKYFQGR +KSHAYTHSLEAGHHVYINL TEKVYCLPD YEINDPSLDDI
Sbjct: 136 NLNVYACLVCGKYFQGRSQKSHAYTHSLEAGHHVYINLLTEKVYCLPDSYEINDPSLDDI 195
Query: 189 RHVLNPRLTAKEVEQLDKNKQWSRALDGSSYLPGMVGLNNIKETDFVNVTIQSLMRVTPL 248
RHVLNPR + +V +LDKN+QWSRALDGS YLPGMVGLNNI++T+FVNVTIQSLMRVTPL
Sbjct: 196 RHVLNPRFSRAQVNELDKNRQWSRALDGSDYLPGMVGLNNIQKTEFVNVTIQSLMRVTPL 255
Query: 249 RNFFLIPENYQHCKSPLVQRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGAQ 308
RNFFLIPENYQHCKSPLV RFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG Q
Sbjct: 256 RNFFLIPENYQHCKSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGQQ 315
Query: 309 SDPVEFMSWLLNTLHADLKTSKKNMSIIYECFQGELEVVKEIPNRMIIDKKEDGEDQNNV 368
SDPVEFMSWLLNTLH DL+TSK SII++CFQGELEVVKE Q N
Sbjct: 316 SDPVEFMSWLLNTLHMDLRTSKDASSIIHKCFQGELEVVKEF--------------QGNE 361
Query: 369 EKLSDGGTQRNAFLKETSKXXXXXXXXXXXXXXXXKDVMEKNIIPQVPLFNILKKFDGET 428
K E S+ KDVMEKNIIPQV LF++LKKFDGET
Sbjct: 362 NK-------------EISRMSFLMLGLDLPPPPLFKDVMEKNIIPQVALFDLLKKFDGET 408
Query: 429 VTEVVRPHIARMQYRVTRLPKYMIIHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIP-L 487
VTEVVRP +ARM+YRV + P+Y++ HM RF KNNFF EKNPTLVNFPVK++EL+DYIP L
Sbjct: 409 VTEVVRPKLARMRYRVIKSPRYLMFHMVRFKKNNFFKEKNPTLVNFPVKDMELRDYIPSL 468
Query: 488 PTPKENEKLRSKYDLIANIVHDGKPGEGVYRVFVQRKSEELWYEMQDLHVSETLPHLVAL 547
P E E + SKY+LIANIVHDGKP +G +RVFVQRKS+ELWYEMQDLHV+ETLP +V L
Sbjct: 469 PRAPEGENVCSKYNLIANIVHDGKPEDGYFRVFVQRKSQELWYEMQDLHVAETLPQMVEL 528
Query: 548 SETYMQIYEQQQ 559
SE YMQIYEQ++
Sbjct: 529 SEAYMQIYEQEE 540
>AT4G22350.2 | Symbols: | Ubiquitin C-terminal hydrolases
superfamily protein | chr4:11804073-11806939 REVERSE
LENGTH=539
Length = 539
Score = 728 bits (1878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/553 (67%), Positives = 419/553 (75%), Gaps = 46/553 (8%)
Query: 22 DLRRQRVDKEEEDSSP----IANPLSGLANNYADIDEEEEKD---ANIQRKNDGSQHNGH 74
+++R+RV E DS P NPL AN Y D + ++ K N+ K +G NG+
Sbjct: 17 EVKRKRV-MERSDSPPPPLGFNNPLLPFANAYDDDNNQQNKSQTRCNVVAKGEG---NGN 72
Query: 75 KYQXXXXXXXXX-------XXQFGGRNSRHVEVRKDCPYLDTVNRQVLDFDFEKFCSVSL 127
K + + G++SRHVEVR+DCPYLDTVNRQVLDFDFE+FCSVSL
Sbjct: 73 KVKGEAQVEVDDDEDDDDDASKGRGKHSRHVEVRRDCPYLDTVNRQVLDFDFERFCSVSL 132
Query: 128 SNLNVYACLVCGKYFQGRGRKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLDD 187
SNLNVYACLVCGKYFQGR +KSHAYTHSLEAGHHVYINL TEKVYCLPD YEINDPSLDD
Sbjct: 133 SNLNVYACLVCGKYFQGRSQKSHAYTHSLEAGHHVYINLLTEKVYCLPDSYEINDPSLDD 192
Query: 188 IRHVLNPRLTAKEVEQLDKNKQWSRALDGSSYLPGMVGLNNIKETDFVNVTIQSLMRVTP 247
IRHVLNPR + +V +LDKN+QWSRALDGS YLPGMVGLNNI++T+FVNVTIQSLMRVTP
Sbjct: 193 IRHVLNPRFSRAQVNELDKNRQWSRALDGSDYLPGMVGLNNIQKTEFVNVTIQSLMRVTP 252
Query: 248 LRNFFLIPENYQHCKSPLVQRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGA 307
LRNFFLIPENYQHCKSPL RFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG
Sbjct: 253 LRNFFLIPENYQHCKSPLGHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGQ 312
Query: 308 QSDPVEFMSWLLNTLHADLKTSKKNMSIIYECFQGELEVVKEIPNRMIIDKKEDGEDQNN 367
QSDPVEFMSWLLNTLH DL+TSK SII++CFQGELEVVKE Q N
Sbjct: 313 QSDPVEFMSWLLNTLHMDLRTSKDASSIIHKCFQGELEVVKEY--------------QGN 358
Query: 368 VEKLSDGGTQRNAFLKETSKXXXXXXXXXXXXXXXXKDVMEKNIIPQVPLFNILKKFDGE 427
K E S+ KDVMEKNIIPQV LF++LKKFDGE
Sbjct: 359 ENK-------------EISRMPFLMLGLDLPPPPLFKDVMEKNIIPQVALFDLLKKFDGE 405
Query: 428 TVTEVVRPHIARMQYRVTRLPKYMIIHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIP- 486
TVTEVVRP +ARM+YRV + P+Y++ HM RF KNNFF EKNPTLVNFPVK++EL+DYIP
Sbjct: 406 TVTEVVRPKLARMRYRVIKSPRYLMFHMVRFKKNNFFKEKNPTLVNFPVKDMELRDYIPS 465
Query: 487 LPTPKENEKLRSKYDLIANIVHDGKPGEGVYRVFVQRKSEELWYEMQDLHVSETLPHLVA 546
LP E E + SKY+LIANIVHDGKP +G +RVFVQRKS+ELWYEMQDLHV+ETLP +V
Sbjct: 466 LPRAPEGENVCSKYNLIANIVHDGKPEDGYFRVFVQRKSQELWYEMQDLHVAETLPQMVE 525
Query: 547 LSETYMQIYEQQQ 559
LSE YMQIYEQQ+
Sbjct: 526 LSEAYMQIYEQQE 538
>AT4G22350.1 | Symbols: | Ubiquitin C-terminal hydrolases
superfamily protein | chr4:11804073-11806939 REVERSE
LENGTH=510
Length = 510
Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/469 (74%), Positives = 386/469 (82%), Gaps = 28/469 (5%)
Query: 92 GRNSRHVEVRKDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYFQGRGRKSHA 151
G++SRHVEVR+DCPYLDTVNRQVLDFDFE+FCSVSLSNLNVYACLVCGKYFQGR +KSHA
Sbjct: 68 GKHSRHVEVRRDCPYLDTVNRQVLDFDFERFCSVSLSNLNVYACLVCGKYFQGRSQKSHA 127
Query: 152 YTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLDDIRHVLNPRLTAKEVEQLDKNKQWS 211
YTHSLEAGHHVYINL TEKVYCLPD YEINDPSLDDIRHVLNPR + +V +LDKN+QWS
Sbjct: 128 YTHSLEAGHHVYINLLTEKVYCLPDSYEINDPSLDDIRHVLNPRFSRAQVNELDKNRQWS 187
Query: 212 RALDGSSYLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYQHCKSPLVQRFGE 271
RALDGS YLPGMVGLNNI++T+FVNVTIQSLMRVTPLRNFFLIPENYQHCKSPL RFGE
Sbjct: 188 RALDGSDYLPGMVGLNNIQKTEFVNVTIQSLMRVTPLRNFFLIPENYQHCKSPLGHRFGE 247
Query: 272 LTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGAQSDPVEFMSWLLNTLHADLKTSKK 331
LTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG QSDPVEFMSWLLNTLH DL+TSK
Sbjct: 248 LTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGQQSDPVEFMSWLLNTLHMDLRTSKD 307
Query: 332 NMSIIYECFQGELEVVKEIPNRMIIDKKEDGEDQNNVEKLSDGGTQRNAFLKETSKXXXX 391
SII++CFQGELEVVKE Q N K E S+
Sbjct: 308 ASSIIHKCFQGELEVVKEY--------------QGNENK-------------EISRMPFL 340
Query: 392 XXXXXXXXXXXXKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHIARMQYRVTRLPKYM 451
KDVMEKNIIPQV LF++LKKFDGETVTEVVRP +ARM+YRV + P+Y+
Sbjct: 341 MLGLDLPPPPLFKDVMEKNIIPQVALFDLLKKFDGETVTEVVRPKLARMRYRVIKSPRYL 400
Query: 452 IIHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIP-LPTPKENEKLRSKYDLIANIVHDG 510
+ HM RF KNNFF EKNPTLVNFPVK++EL+DYIP LP E E + SKY+LIANIVHDG
Sbjct: 401 MFHMVRFKKNNFFKEKNPTLVNFPVKDMELRDYIPSLPRAPEGENVCSKYNLIANIVHDG 460
Query: 511 KPGEGVYRVFVQRKSEELWYEMQDLHVSETLPHLVALSETYMQIYEQQQ 559
KP +G +RVFVQRKS+ELWYEMQDLHV+ETLP +V LSE YMQIYEQQ+
Sbjct: 461 KPEDGYFRVFVQRKSQELWYEMQDLHVAETLPQMVELSEAYMQIYEQQE 509
>AT4G22410.1 | Symbols: | Ubiquitin C-terminal hydrolases
superfamily protein | chr4:11818213-11820135 REVERSE
LENGTH=340
Length = 340
Score = 539 bits (1388), Expect = e-153, Method: Compositional matrix adjust.
Identities = 265/362 (73%), Positives = 287/362 (79%), Gaps = 27/362 (7%)
Query: 110 VNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYFQGRGRKSHAYTHSLEAGHHVYINLRTE 169
V QVLDF FE+FCSVSLSNLNVYACLVCGKYFQGR +KSHAYTHSLEAGHHVYINL TE
Sbjct: 2 VEFQVLDFHFERFCSVSLSNLNVYACLVCGKYFQGRSQKSHAYTHSLEAGHHVYINLLTE 61
Query: 170 KVYCLPDGYEINDPSLDDIRHVLNPRLTAKEVEQLDKNKQWSRALDGSSYLPGMVGLNNI 229
KVYCLPD YEINDPSLDDIRHVLNPR + +V +LDKN+QWSRALDGS YLPGMVGLNNI
Sbjct: 62 KVYCLPDSYEINDPSLDDIRHVLNPRFSRAQVNELDKNRQWSRALDGSDYLPGMVGLNNI 121
Query: 230 KETDFVNVTIQSLMRVTPLRNFFLIPENYQHCKSPLVQRFGELTRKIWHARNFKGQVSPH 289
++T+FVNVTIQSLMRVTPLRNFF IPENYQHCKSPLV FGELTRKIWHARNFKGQVSPH
Sbjct: 122 QKTEFVNVTIQSLMRVTPLRNFFHIPENYQHCKSPLVHCFGELTRKIWHARNFKGQVSPH 181
Query: 290 EFLQAVMKASKKRFRIGAQSDPVEFMSWLLNTLHADLKTSKKNMSIIYECFQGELEVVKE 349
EFLQAVMKASKKRFRIG QSDPVEFMSWLLNTLH DL+TSK SII++CFQGELEVVKE
Sbjct: 182 EFLQAVMKASKKRFRIGQQSDPVEFMSWLLNTLHMDLRTSKDASSIIHKCFQGELEVVKE 241
Query: 350 IPNRMIIDKKEDGEDQNNVEKLSDGGTQRNAFLKETSKXXXXXXXXXXXXXXXXKDVMEK 409
G + KE S+ KDVMEK
Sbjct: 242 F----------QGNEN-----------------KEISRMSFLMLGLDLPPPPLFKDVMEK 274
Query: 410 NIIPQVPLFNILKKFDGETVTEVVRPHIARMQYRVTRLPKYMIIHMRRFTKNNFFVEKNP 469
NIIPQV LF++LKKFDGETVTEVVRP +ARM+YRV + P+Y++ HM RF KNNFF EKNP
Sbjct: 275 NIIPQVALFDLLKKFDGETVTEVVRPKLARMRYRVIKSPRYLMFHMVRFKKNNFFKEKNP 334
Query: 470 TL 471
TL
Sbjct: 335 TL 336
>AT5G22030.1 | Symbols: UBP8 | ubiquitin-specific protease 8 |
chr5:7290155-7296344 REVERSE LENGTH=913
Length = 913
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 446 RLPKYMIIHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIAN 505
RLP+ ++IH++RF+ + F K V+FP+ NL+L YI +N + +Y L A
Sbjct: 804 RLPEILVIHLKRFSYSRFMKNKLEAYVDFPLDNLDLSSYISY----KNGQTTYRYMLYAI 859
Query: 506 IVHDGKPGEGVYRVFVQRKSEELWYEMQDLHVSETLPHLVALSETYMQIYEQ 557
H G G G Y +V + WY+ D HV + + S Y+ Y++
Sbjct: 860 SNHYGSMGGGHYTAYVHHGGDR-WYDFDDSHVHQISQEKIKTSAAYVLFYKR 910
>AT5G22030.2 | Symbols: UBP8 | ubiquitin-specific protease 8 |
chr5:7290155-7296344 REVERSE LENGTH=913
Length = 913
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 446 RLPKYMIIHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIAN 505
RLP+ ++IH++RF+ + F K V+FP+ NL+L YI +N + +Y L A
Sbjct: 804 RLPEILVIHLKRFSYSRFMKNKLEAYVDFPLDNLDLSSYISY----KNGQTTYRYMLYAI 859
Query: 506 IVHDGKPGEGVYRVFVQRKSEELWYEMQDLHVSETLPHLVALSETYMQIYEQ 557
H G G G Y +V + WY+ D HV + + S Y+ Y++
Sbjct: 860 SNHYGSMGGGHYTAYVHHGGDR-WYDFDDSHVHQISQEKIKTSAAYVLFYKR 910
>AT2G40930.1 | Symbols: UBP5, ATUBP5, PDE323 | ubiquitin-specific
protease 5 | chr2:17076714-17082192 REVERSE LENGTH=924
Length = 924
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
Query: 438 ARMQYRVTRLPKYMIIHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLR 497
A + + RLP+ ++IH++RF+ + K T VNFP+ +L+L Y+ +N
Sbjct: 800 ASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFPIHDLDLTKYV----ANKNLSQP 855
Query: 498 SKYDLIANIVHDGKPGEGVYRVFVQRKSEELWYEMQDLHVSETLPHLVALSETYMQIYEQ 557
Y+L A H G G G Y ++ + WY D H+S V Y+ Y +
Sbjct: 856 QLYELYALTNHYGGMGSGHYTAHIKLLDDSRWYNFDDSHISHINEDDVKSGAAYVLFYRR 915
Query: 558 Q 558
+
Sbjct: 916 K 916
>AT1G32850.1 | Symbols: UBP11 | ubiquitin-specific protease 11 |
chr1:11902629-11906900 FORWARD LENGTH=892
Length = 892
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 14/119 (11%)
Query: 222 GMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYQ---HCKSPLVQR------FGEL 272
G+ GL N+ T F+N T+Q L P+ +FL ++Y+ + K+PL R FGEL
Sbjct: 299 GLGGLQNLGNTCFMNSTLQCLAHTPPIVEYFL--QDYRSDINAKNPLGMRGELAIAFGEL 356
Query: 273 TRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGAQSDPVEFMSWLLNTLHADLKTSKK 331
RK+W + + V+P F + + + + F Q D E +++LL+ LH DL K+
Sbjct: 357 LRKLWSSG--QNTVAPRAFKTKLARFAPQ-FSGYNQHDSQEMLAFLLDGLHEDLNKVKR 412
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 446 RLPKYMIIHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSK-YDLIA 504
+LP ++ H++RFT + +F K TLVNF + +L+L Y+ +NE +S Y+L A
Sbjct: 773 KLPDILVFHLKRFTYSRYFKNKIDTLVNFHIHDLDLSKYV------KNEDGQSYLYELYA 826
Query: 505 NIVHDGKPGEGVYRVFVQRKSEELWYEMQDLHVSETLPHLVALSETYMQIYEQ 557
H G G G Y + + E WY D VS + S Y+ Y++
Sbjct: 827 ISNHYGGLGGGHYTAYAKLMDETKWYNFDDSRVSAVNESEIKTSAAYVLFYQR 879
>AT5G10790.1 | Symbols: UBP22 | ubiquitin-specific protease 22 |
chr5:3410638-3412559 FORWARD LENGTH=557
Length = 557
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 37/171 (21%)
Query: 110 VNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYFQGRGRKSHAYTHS-LEAGHHVYINLRT 168
+ Q +D +CSV L Y CL+C + SH H+ L GH + I++
Sbjct: 46 IKLQGIDIPRCSYCSVYQKRL--YICLIC----RSISCSSHILLHTQLNKGHDIAIDVER 99
Query: 169 EKVYCLPDGYEINDPSLDDIRHVLNPRL--------TAKEVEQLDKNKQWSRALD----- 215
++YC ++ D D++ V++ +L + +V + NK+ R LD
Sbjct: 100 SELYCCACIDQVYDSEFDEV--VVSKQLFGLGMSVKSGADVVAVRSNKK--RRLDSQLII 155
Query: 216 GSSYLP-------------GMVGLNNIKETDFVNVTIQSLMRVTPLRNFFL 253
GS++L G+ GLNN+ T F+N +Q+L+ PLRNF+L
Sbjct: 156 GSNFLVSPRDRREKWTFPLGLRGLNNLGSTCFMNAVLQALVHAPPLRNFWL 206
>AT4G22420.1 | Symbols: | Ubiquitin-specific protease family
C19-related protein | chr4:11825614-11826432 REVERSE
LENGTH=184
Length = 184
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 8/66 (12%)
Query: 92 GRNSRHVEVRKDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYFQGRGRKSHA 151
G++SRHVEVR+DCPYLDTVNRQV+ D V L+ + K + GRK+ A
Sbjct: 120 GKHSRHVEVRRDCPYLDTVNRQVIIIDQFLMLRVPLATMR--------KRMRTGGRKAKA 171
Query: 152 YTHSLE 157
L+
Sbjct: 172 MEKYLK 177
>AT4G10570.1 | Symbols: UBP9 | ubiquitin-specific protease 9 |
chr4:6523657-6528058 REVERSE LENGTH=923
Length = 923
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 5/120 (4%)
Query: 438 ARMQYRVTRLPKYMIIHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLR 497
A + + +LP ++ H++RFT + + K T VNFPV +L+L Y+ K
Sbjct: 780 ANKKLDLWKLPDILVFHLKRFTYSRYLKNKIDTFVNFPVHDLDLSKYV-----KNKNGQS 834
Query: 498 SKYDLIANIVHDGKPGEGVYRVFVQRKSEELWYEMQDLHVSETLPHLVALSETYMQIYEQ 557
Y+L A H G G G Y + + + WY D HVS + S Y+ Y +
Sbjct: 835 YLYELYAVSNHYGGLGGGHYTAYAKLIDDNKWYHFDDSHVSSVNESEIRNSAAYVLFYRR 894
>AT4G30890.3 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 9/122 (7%)
Query: 438 ARMQYRVTRLPKYMIIHMRRFTKNNFFVEKNPTLVNFPVK-NLELKDYIPLPTPKENEKL 496
A ++ +L K MI+H+ RF+ + K V FP++ NL + L NE L
Sbjct: 436 ASKSIKIQKLSKIMILHLMRFSYGSQGSTKLRKGVKFPLELNLNRSHLVSL----SNESL 491
Query: 497 RSKYDLIANIVHDG-KPGEGVYRVFVQRKSEELWYEMQDLHVSETLPHLVALSETYMQIY 555
R Y+L+A I H G P +G Y +RK+ + W D V+ LV + Y+ Y
Sbjct: 492 R--YELVATITHHGWDPSKGHYTTDARRKNGQ-WLRFDDASVTPIGTKLVLHDQAYVLFY 548
Query: 556 EQ 557
+Q
Sbjct: 549 KQ 550
>AT4G30890.2 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 9/122 (7%)
Query: 438 ARMQYRVTRLPKYMIIHMRRFTKNNFFVEKNPTLVNFPVK-NLELKDYIPLPTPKENEKL 496
A ++ +L K MI+H+ RF+ + K V FP++ NL + L NE L
Sbjct: 436 ASKSIKIQKLSKIMILHLMRFSYGSQGSTKLRKGVKFPLELNLNRSHLVSL----SNESL 491
Query: 497 RSKYDLIANIVHDG-KPGEGVYRVFVQRKSEELWYEMQDLHVSETLPHLVALSETYMQIY 555
R Y+L+A I H G P +G Y +RK+ + W D V+ LV + Y+ Y
Sbjct: 492 R--YELVATITHHGWDPSKGHYTTDARRKNGQ-WLRFDDASVTPIGTKLVLHDQAYVLFY 548
Query: 556 EQ 557
+Q
Sbjct: 549 KQ 550
>AT4G30890.1 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 9/122 (7%)
Query: 438 ARMQYRVTRLPKYMIIHMRRFTKNNFFVEKNPTLVNFPVK-NLELKDYIPLPTPKENEKL 496
A ++ +L K MI+H+ RF+ + K V FP++ NL + L NE L
Sbjct: 436 ASKSIKIQKLSKIMILHLMRFSYGSQGSTKLRKGVKFPLELNLNRSHLVSL----SNESL 491
Query: 497 RSKYDLIANIVHDG-KPGEGVYRVFVQRKSEELWYEMQDLHVSETLPHLVALSETYMQIY 555
R Y+L+A I H G P +G Y +RK+ + W D V+ LV + Y+ Y
Sbjct: 492 R--YELVATITHHGWDPSKGHYTTDARRKNGQ-WLRFDDASVTPIGTKLVLHDQAYVLFY 548
Query: 556 EQ 557
+Q
Sbjct: 549 KQ 550
>AT4G10590.1 | Symbols: UBP10 | ubiquitin-specific protease 10 |
chr4:6538919-6543272 REVERSE LENGTH=910
Length = 910
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
Query: 438 ARMQYRVTRLPKYMIIHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLR 497
A + + +LP ++ H++RFT + + K T VNFPV +L+L Y+ K
Sbjct: 779 ANKKLDLWKLPDILVFHLKRFTYSRYLKNKIDTFVNFPVHDLDLSKYV-----KNKNDQS 833
Query: 498 SKYDLIANIVHDGKPGEGVYRVFVQRKSEELWYEMQDLHVSETLPHLVALSETYMQIY 555
Y+L A H G G G Y + + + WY D HVS + S Y+ Y
Sbjct: 834 YLYELYAVSNHYGGLGGGHYTAYAKLIDDNEWYHFDDSHVSSVNESEIKNSAAYVLFY 891
>AT4G10590.2 | Symbols: UBP10 | ubiquitin-specific protease 10 |
chr4:6538919-6543272 REVERSE LENGTH=910
Length = 910
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
Query: 438 ARMQYRVTRLPKYMIIHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLR 497
A + + +LP ++ H++RFT + + K T VNFPV +L+L Y+ K
Sbjct: 779 ANKKLDLWKLPDILVFHLKRFTYSRYLKNKIDTFVNFPVHDLDLSKYV-----KNKNDQS 833
Query: 498 SKYDLIANIVHDGKPGEGVYRVFVQRKSEELWYEMQDLHVSETLPHLVALSETYMQIY 555
Y+L A H G G G Y + + + WY D HVS + S Y+ Y
Sbjct: 834 YLYELYAVSNHYGGLGGGHYTAYAKLIDDNEWYHFDDSHVSSVNESEIKNSAAYVLFY 891