Miyakogusa Predicted Gene

Lj6g3v1984570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1984570.1 tr|E6ZGH5|E6ZGH5_DICLA SAP30-binding protein
OS=Dicentrarchus labrax GN=SAP30BP PE=4
SV=1,29.82,2e-17,HCNGP,HCNGP-like; TRANSCRIPTIONAL REGULATOR PROTEIN
HCNGP,HCNGP-like; coiled-coil,NULL; seg,NULL,CUFF.60400.1
         (381 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G29220.1 | Symbols:  | transcriptional regulator family prote...   197   1e-50
AT1G29220.2 | Symbols:  | transcriptional regulator family prote...   188   6e-48

>AT1G29220.1 | Symbols:  | transcriptional regulator family protein
           | chr1:10210678-10212571 REVERSE LENGTH=351
          Length = 351

 Score =  197 bits (501), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 96/153 (62%), Positives = 107/153 (69%), Gaps = 2/153 (1%)

Query: 227 KCSEELQRKINKFLEYKRAGKSFNAEVRNRKDYRNPDFLLHAVRYQDIDQIGSCFSKDVF 286
           +CSEELQRKI+KFL  K+ GKSFN+EVRNRK+YRNPDFLLHAV YQDIDQIGSCFSKDVF
Sbjct: 140 RCSEELQRKIDKFLSLKKMGKSFNSEVRNRKEYRNPDFLLHAVSYQDIDQIGSCFSKDVF 199

Query: 287 DPHGYDPSDFYDEIEADMXXXXXXXXXXXXXAQKVDFVSGSTQPGIAAGPPRISIPVAGA 346
           DP GYDPSDF D IE DM              QK+DFVS  TQPG      + +IP+ G 
Sbjct: 200 DPSGYDPSDFCDAIEIDMKNERERKEQESKKNQKLDFVSAGTQPGAVFAAQKPNIPIPGI 259

Query: 347 SAATASGLHLVPPGADSINRDGRQNKKSKWDKV 379
            A   SGL  +P   +   RDGR NKKSKWDKV
Sbjct: 260 PALATSGLPSIP--TEIAARDGRPNKKSKWDKV 290


>AT1G29220.2 | Symbols:  | transcriptional regulator family protein
           | chr1:10210678-10212571 REVERSE LENGTH=363
          Length = 363

 Score =  188 bits (477), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 96/165 (58%), Positives = 107/165 (64%), Gaps = 14/165 (8%)

Query: 227 KCSEELQ------------RKINKFLEYKRAGKSFNAEVRNRKDYRNPDFLLHAVRYQDI 274
           +CSEELQ            RKI+KFL  K+ GKSFN+EVRNRK+YRNPDFLLHAV YQDI
Sbjct: 140 RCSEELQARTHWCVVWGLLRKIDKFLSLKKMGKSFNSEVRNRKEYRNPDFLLHAVSYQDI 199

Query: 275 DQIGSCFSKDVFDPHGYDPSDFYDEIEADMXXXXXXXXXXXXXAQKVDFVSGSTQPGIAA 334
           DQIGSCFSKDVFDP GYDPSDF D IE DM              QK+DFVS  TQPG   
Sbjct: 200 DQIGSCFSKDVFDPSGYDPSDFCDAIEIDMKNERERKEQESKKNQKLDFVSAGTQPGAVF 259

Query: 335 GPPRISIPVAGASAATASGLHLVPPGADSINRDGRQNKKSKWDKV 379
              + +IP+ G  A   SGL  +P   +   RDGR NKKSKWDKV
Sbjct: 260 AAQKPNIPIPGIPALATSGLPSIP--TEIAARDGRPNKKSKWDKV 302