Miyakogusa Predicted Gene

Lj6g3v1984370.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1984370.1 Non Chatacterized Hit- tr|D7SLK5|D7SLK5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,75.44,1e-18,AP2_ERF,AP2/ERF domain; seg,NULL; DNA-binding domain
in plant proteins such as,AP2/ERF domain; AP2,A,CUFF.60379.1
         (357 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G19790.1 | Symbols: RAP2.11 | related to AP2 11 | chr5:668927...    66   3e-11
AT4G23750.2 | Symbols: CRF2, TMO3 | cytokinin response factor 2 ...    59   8e-09
AT4G23750.1 | Symbols: CRF2, TMO3 | cytokinin response factor 2 ...    59   8e-09
AT4G11140.1 | Symbols: CRF1 | cytokinin response factor 1 | chr4...    55   9e-08
AT1G53170.1 | Symbols: ATERF-8, ATERF8, ERF8 | ethylene response...    54   2e-07
AT5G18560.1 | Symbols: PUCHI | Integrase-type DNA-binding superf...    54   2e-07
AT1G72360.3 | Symbols: HRE1 | Integrase-type DNA-binding superfa...    54   2e-07
AT1G72360.2 | Symbols: HRE1 | Integrase-type DNA-binding superfa...    54   2e-07
AT1G72360.1 | Symbols: HRE1 | Integrase-type DNA-binding superfa...    54   2e-07
AT1G28370.1 | Symbols: ERF11, ATERF11 | ERF domain protein 11 | ...    53   4e-07
AT5G50080.1 | Symbols: ERF110 | ethylene response  factor 110 | ...    53   4e-07
AT5G13910.1 | Symbols: LEP | Integrase-type DNA-binding superfam...    52   4e-07
AT1G24590.1 | Symbols: DRNL, DRN-LIKE, SOB2, ESR2 | DORNROSCHEN-...    52   5e-07
AT5G53290.1 | Symbols: CRF3 | cytokinin response factor 3 | chr5...    52   5e-07
AT1G80580.1 | Symbols:  | Integrase-type DNA-binding superfamily...    52   6e-07
AT3G15210.1 | Symbols: ATERF-4, ERF4, RAP2.5, ATERF4 | ethylene ...    52   8e-07
AT1G12980.1 | Symbols: ESR1, DRN | Integrase-type DNA-binding su...    52   8e-07
AT3G20310.1 | Symbols: ATERF-7, ATERF7, ERF7 | ethylene response...    52   8e-07
AT1G68550.2 | Symbols:  | Integrase-type DNA-binding superfamily...    51   1e-06
AT1G68550.1 | Symbols:  | Integrase-type DNA-binding superfamily...    51   1e-06
AT5G44210.1 | Symbols: ERF9, ATERF9, ATERF-9 | erf domain protei...    51   1e-06
AT4G27950.1 | Symbols: CRF4 | cytokinin response factor 4 | chr4...    50   2e-06
AT2G33710.2 | Symbols:  | Integrase-type DNA-binding superfamily...    50   2e-06
AT2G33710.1 | Symbols:  | Integrase-type DNA-binding superfamily...    50   2e-06
AT1G28360.1 | Symbols: ERF12, ATERF12 | ERF domain protein 12 | ...    50   3e-06
AT1G50640.1 | Symbols: ERF3, ATERF3 | ethylene responsive elemen...    50   3e-06
AT5G07310.1 | Symbols:  | Integrase-type DNA-binding superfamily...    50   3e-06
AT5G61890.1 | Symbols:  | Integrase-type DNA-binding superfamily...    49   4e-06
AT5G13330.1 | Symbols: Rap2.6L | related to AP2 6l | chr5:427238...    49   5e-06

>AT5G19790.1 | Symbols: RAP2.11 | related to AP2 11 |
          chr5:6689271-6690032 REVERSE LENGTH=253
          Length = 253

 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 26/33 (78%), Positives = 32/33 (96%)

Query: 31 RFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDT 63
          +FVGVRQRPSG+WVAEIKD+ QK+R+WLGTF+T
Sbjct: 21 KFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFET 53


>AT4G23750.2 | Symbols: CRF2, TMO3 | cytokinin response factor 2 |
           chr4:12376751-12377782 FORWARD LENGTH=343
          Length = 343

 Score = 58.5 bits (140), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 4/65 (6%)

Query: 3   QFDISKKQKMGAPTCG----IXXXXXXXXGHHRFVGVRQRPSGRWVAEIKDSLQKVRLWL 58
           Q +  K+QK    +      +        G  +F GVRQRP G+W AEI+D L++VRLWL
Sbjct: 89  QMESKKRQKRAVKSESTVSPVVSATTTTTGEKKFRGVRQRPWGKWAAEIRDPLKRVRLWL 148

Query: 59  GTFDT 63
           GT++T
Sbjct: 149 GTYNT 153


>AT4G23750.1 | Symbols: CRF2, TMO3 | cytokinin response factor 2 |
           chr4:12376751-12377782 FORWARD LENGTH=343
          Length = 343

 Score = 58.5 bits (140), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 4/65 (6%)

Query: 3   QFDISKKQKMGAPTCG----IXXXXXXXXGHHRFVGVRQRPSGRWVAEIKDSLQKVRLWL 58
           Q +  K+QK    +      +        G  +F GVRQRP G+W AEI+D L++VRLWL
Sbjct: 89  QMESKKRQKRAVKSESTVSPVVSATTTTTGEKKFRGVRQRPWGKWAAEIRDPLKRVRLWL 148

Query: 59  GTFDT 63
           GT++T
Sbjct: 149 GTYNT 153


>AT4G11140.1 | Symbols: CRF1 | cytokinin response factor 1 |
           chr4:6794930-6795793 REVERSE LENGTH=287
          Length = 287

 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 22/34 (64%), Positives = 28/34 (82%)

Query: 30  HRFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDT 63
            +F GVRQRP G+W AEI+D  ++VR+WLGTFDT
Sbjct: 85  RKFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDT 118


>AT1G53170.1 | Symbols: ATERF-8, ATERF8, ERF8 | ethylene response
          factor 8 | chr1:19821539-19822096 REVERSE LENGTH=185
          Length = 185

 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/33 (63%), Positives = 28/33 (84%)

Query: 31 RFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDT 63
          R+ GVR+RP GR+ AEI+D ++K R+WLGTFDT
Sbjct: 30 RYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDT 62


>AT5G18560.1 | Symbols: PUCHI | Integrase-type DNA-binding
          superfamily protein | chr5:6164859-6165905 REVERSE
          LENGTH=348
          Length = 348

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 22/33 (66%), Positives = 26/33 (78%)

Query: 31 RFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDT 63
          RF+GVR+RP GR+ AEI+D   K R WLGTFDT
Sbjct: 54 RFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDT 86


>AT1G72360.3 | Symbols: HRE1 | Integrase-type DNA-binding
           superfamily protein | chr1:27241904-27242777 FORWARD
           LENGTH=260
          Length = 260

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 20/33 (60%), Positives = 28/33 (84%)

Query: 31  RFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDT 63
           R+ G+R+RP GRW AEI+D ++ VR+WLGTF+T
Sbjct: 73  RYKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNT 105


>AT1G72360.2 | Symbols: HRE1 | Integrase-type DNA-binding
           superfamily protein | chr1:27241904-27242777 FORWARD
           LENGTH=262
          Length = 262

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 20/33 (60%), Positives = 28/33 (84%)

Query: 31  RFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDT 63
           R+ G+R+RP GRW AEI+D ++ VR+WLGTF+T
Sbjct: 75  RYKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNT 107


>AT1G72360.1 | Symbols: HRE1 | Integrase-type DNA-binding
          superfamily protein | chr1:27242142-27242777 FORWARD
          LENGTH=211
          Length = 211

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 20/33 (60%), Positives = 28/33 (84%)

Query: 31 RFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDT 63
          R+ G+R+RP GRW AEI+D ++ VR+WLGTF+T
Sbjct: 24 RYKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNT 56


>AT1G28370.1 | Symbols: ERF11, ATERF11 | ERF domain protein 11 |
          chr1:9956351-9956851 REVERSE LENGTH=166
          Length = 166

 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 30/50 (60%)

Query: 14 APTCGIXXXXXXXXGHHRFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDT 63
          APT              R+ GVR+RP GR+ AEI+D  +K R+WLGTFDT
Sbjct: 2  APTVKTAAVKTNEGNGVRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDT 51


>AT5G50080.1 | Symbols: ERF110 | ethylene response  factor 110 |
           chr5:20365948-20366835 FORWARD LENGTH=220
          Length = 220

 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 21/34 (61%), Positives = 26/34 (76%)

Query: 30  HRFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDT 63
            R+ GVRQRP G+W AEI+D  +  R+WLGTFDT
Sbjct: 75  RRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDT 108


>AT5G13910.1 | Symbols: LEP | Integrase-type DNA-binding
          superfamily protein | chr5:4482450-4483085 REVERSE
          LENGTH=211
          Length = 211

 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 22/33 (66%), Positives = 26/33 (78%)

Query: 31 RFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDT 63
          RF+GVR+RP GR+ AEI+D   K R WLGTFDT
Sbjct: 19 RFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDT 51


>AT1G24590.1 | Symbols: DRNL, DRN-LIKE, SOB2, ESR2 |
          DORNROSCHEN-like | chr1:8714389-8715309 REVERSE
          LENGTH=306
          Length = 306

 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 22/33 (66%), Positives = 26/33 (78%)

Query: 31 RFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDT 63
          R+ GVR+RP GR+ AEI+D L K R WLGTFDT
Sbjct: 57 RYRGVRRRPWGRYAAEIRDPLSKERRWLGTFDT 89


>AT5G53290.1 | Symbols: CRF3 | cytokinin response factor 3 |
           chr5:21617961-21619025 REVERSE LENGTH=354
          Length = 354

 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 21/33 (63%), Positives = 27/33 (81%)

Query: 31  RFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDT 63
           +F GVRQRP G+W AEI+D  Q+ R+WLGTF+T
Sbjct: 124 KFRGVRQRPWGKWAAEIRDPEQRRRIWLGTFET 156


>AT1G80580.1 | Symbols:  | Integrase-type DNA-binding superfamily
           protein | chr1:30293558-30294328 FORWARD LENGTH=256
          Length = 256

 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 21/32 (65%), Positives = 26/32 (81%)

Query: 32  FVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDT 63
           F+GVR+RP GRW AEI+D + + R WLGTFDT
Sbjct: 116 FMGVRKRPWGRWSAEIRDRIGRCRHWLGTFDT 147


>AT3G15210.1 | Symbols: ATERF-4, ERF4, RAP2.5, ATERF4 | ethylene
          responsive element binding factor 4 |
          chr3:5121472-5122140 FORWARD LENGTH=222
          Length = 222

 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 21/33 (63%), Positives = 27/33 (81%)

Query: 31 RFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDT 63
          R+ GVR+RP GR+ AEI+D  +K R+WLGTFDT
Sbjct: 24 RYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDT 56


>AT1G12980.1 | Symbols: ESR1, DRN | Integrase-type DNA-binding
          superfamily protein | chr1:4429791-4430777 FORWARD
          LENGTH=328
          Length = 328

 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 21/33 (63%), Positives = 26/33 (78%)

Query: 31 RFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDT 63
          R+ GVR+RP GR+ AEI+D + K R WLGTFDT
Sbjct: 56 RYRGVRRRPWGRYAAEIRDPMSKERRWLGTFDT 88


>AT3G20310.1 | Symbols: ATERF-7, ATERF7, ERF7 | ethylene response
          factor 7 | chr3:7085957-7086691 REVERSE LENGTH=244
          Length = 244

 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 21/33 (63%), Positives = 28/33 (84%)

Query: 31 RFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDT 63
          R+ GVR+RP GR+ AEI+D L+K R+WLGTFD+
Sbjct: 26 RYRGVRKRPWGRFAAEIRDPLKKSRVWLGTFDS 58


>AT1G68550.2 | Symbols:  | Integrase-type DNA-binding superfamily
           protein | chr1:25725810-25726784 REVERSE LENGTH=324
          Length = 324

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/31 (67%), Positives = 25/31 (80%)

Query: 33  VGVRQRPSGRWVAEIKDSLQKVRLWLGTFDT 63
           VGVRQR  G+W AEI+D ++K R WLGTFDT
Sbjct: 114 VGVRQRKWGKWAAEIRDPIKKTRTWLGTFDT 144


>AT1G68550.1 | Symbols:  | Integrase-type DNA-binding superfamily
           protein | chr1:25725810-25726784 REVERSE LENGTH=324
          Length = 324

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/31 (67%), Positives = 25/31 (80%)

Query: 33  VGVRQRPSGRWVAEIKDSLQKVRLWLGTFDT 63
           VGVRQR  G+W AEI+D ++K R WLGTFDT
Sbjct: 114 VGVRQRKWGKWAAEIRDPIKKTRTWLGTFDT 144


>AT5G44210.1 | Symbols: ERF9, ATERF9, ATERF-9 | erf domain protein
          9 | chr5:17806742-17807344 FORWARD LENGTH=200
          Length = 200

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 31/64 (48%)

Query: 32 FVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDTXXXXXXXXXXXXXXXXXXXXXXXFELPE 91
          F GVR+RP GR+ AEI+D  +K R+WLGTFDT                       F LP 
Sbjct: 33 FRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNFPLPG 92

Query: 92 SETT 95
            TT
Sbjct: 93 ESTT 96


>AT4G27950.1 | Symbols: CRF4 | cytokinin response factor 4 |
           chr4:13909732-13910739 REVERSE LENGTH=335
          Length = 335

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 26/36 (72%)

Query: 28  GHHRFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDT 63
              ++ GVRQRP G+W AEI+D  Q+ R+WLGTF T
Sbjct: 114 NQKKYRGVRQRPWGKWAAEIRDPEQRRRIWLGTFAT 149


>AT2G33710.2 | Symbols:  | Integrase-type DNA-binding superfamily
           protein | chr2:14258965-14260652 REVERSE LENGTH=231
          Length = 231

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/32 (62%), Positives = 25/32 (78%)

Query: 32  FVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDT 63
           + GVRQRP G+W AEI+D  +  R+WLGTFDT
Sbjct: 70  YRGVRQRPWGKWAAEIRDPNKAARVWLGTFDT 101


>AT2G33710.1 | Symbols:  | Integrase-type DNA-binding superfamily
           protein | chr2:14259271-14260652 REVERSE LENGTH=218
          Length = 218

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/32 (62%), Positives = 25/32 (78%)

Query: 32  FVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDT 63
           + GVRQRP G+W AEI+D  +  R+WLGTFDT
Sbjct: 70  YRGVRQRPWGKWAAEIRDPNKAARVWLGTFDT 101


>AT1G28360.1 | Symbols: ERF12, ATERF12 | ERF domain protein 12 |
          chr1:9951934-9952503 FORWARD LENGTH=189
          Length = 189

 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/32 (62%), Positives = 26/32 (81%)

Query: 32 FVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDT 63
          + GVR+RP GR+ AEI+D  +K R+WLGTFDT
Sbjct: 12 YRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDT 43


>AT1G50640.1 | Symbols: ERF3, ATERF3 | ethylene responsive element
          binding factor 3 | chr1:18757602-18758279 REVERSE
          LENGTH=225
          Length = 225

 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/33 (63%), Positives = 27/33 (81%)

Query: 31 RFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDT 63
          RF GVR+RP GR+ AEI+D  +K R+WLGTFD+
Sbjct: 27 RFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDS 59


>AT5G07310.1 | Symbols:  | Integrase-type DNA-binding superfamily
           protein | chr5:2305684-2306660 FORWARD LENGTH=263
          Length = 263

 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/35 (60%), Positives = 27/35 (77%), Gaps = 2/35 (5%)

Query: 29  HHRFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDT 63
           H+R  GVRQRP G+W AEI+D  +  R+WLGTF+T
Sbjct: 91  HYR--GVRQRPWGKWAAEIRDPQKAARVWLGTFET 123


>AT5G61890.1 | Symbols:  | Integrase-type DNA-binding superfamily
           protein | chr5:24852639-24853744 REVERSE LENGTH=248
          Length = 248

 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 19/32 (59%), Positives = 25/32 (78%)

Query: 32  FVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDT 63
           + GVRQRP G+W AEI+D  +  R+WLGTF+T
Sbjct: 90  YRGVRQRPWGKWAAEIRDPKKAARVWLGTFET 121


>AT5G13330.1 | Symbols: Rap2.6L | related to AP2 6l |
          chr5:4272384-4274461 FORWARD LENGTH=212
          Length = 212

 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 21/35 (60%), Positives = 27/35 (77%), Gaps = 2/35 (5%)

Query: 29 HHRFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDT 63
          H+R  GVRQRP G+W AEI+D  +  R+WLGTF+T
Sbjct: 38 HYR--GVRQRPWGKWAAEIRDPKKAARVWLGTFET 70